F250912

General Info

Members Datasets Scaffolds Average Seq Length
167 111 334 285

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0094369|Ga0395899_0094369_1039_2013
Length 324
Sequence VLSSSLVLHPLAFFGHCSDRSRRKKVTVDEREWLAERFEAHLGHLKAVAYRMLGSLAEADDAVQEAWLRLSRADPSSVENLGGWLTTIVARVCLNLLQSRRSRREEPLDAHLPDPIVSAQDGVDPEQQALLAEGVGLALLVVLDTLTPAERVAFVLHDMFAVPFDQIAPIVGRSPNAAKMLASRARRRVRGADPMPDADLARQREVVDAFFAAARDGDFTALLAVLDPDVVLRADAAAVRAGAPAEVRGAAAVTEHTLTAGGFPRLARLARPALVNGAAGVIIAAAGRPFALVGFTVRHGTIVEIDIFADPNRLNQLDLTVLDA

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
54 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
55 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
56 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
57 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
58 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
61 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
70 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
71 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
72 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
73 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
77 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
101 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
103 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
104 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
105 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
106 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
107 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
108 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
109 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
110 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
111 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.41
Metatranscriptomes 1.2
Isolates 5.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.6
Rhizosphere 90.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0094369 3300037312 Bacteria 2165
2 JGI25406J46586_10004562 3300003203 Bacteria 6447
3 JGI25407J50210_10007991 3300003373 Bacteria 2659
4 JGI25407J50210_10022423 3300003373 Bacteria 1641
5 Ga0070683_100066002 3300005329 Bacteria 3370
6 Ga0070680_100214152 3300005336 Bacteria 1626
7 Ga0070682_100393467 3300005337 Bacteria 1046
8 Ga0070692_10171871 3300005345 Bacteria 1250
9 Ga0070709_10008255 3300005434 Bacteria 5718
10 Ga0070714_100043442 3300005435 Bacteria 3801
11 Ga0070714_100061502 3300005435 Bacteria 3226
12 Ga0070714_100249199 3300005435 Bacteria 1642
13 Ga0070714_100276364 3300005435 Bacteria 1559
14 Ga0070714_100566650 3300005435 Bacteria 1088
15 Ga0070713_100129148 3300005436 Bacteria 2226
16 Ga0070710_10018086 3300005437 Bacteria 3620
17 Ga0070708_100192509 3300005445 Bacteria 1908
18 Ga0070681_10004481 3300005458 Bacteria 13319
19 Ga0070706_100038918 3300005467 Bacteria 4389
20 Ga0070706_100154521 3300005467 Bacteria 2142
21 Ga0070706_100281947 3300005467 Bacteria 1551
22 Ga0070706_100380818 3300005467 Bacteria 1314
23 Ga0070707_100173757 3300005468 Bacteria 2099
24 Ga0070707_100273315 3300005468 Bacteria 1643
25 Ga0070707_100278316 3300005468 Bacteria 1626
26 Ga0070698_100016865 3300005471 Bacteria 7703
27 Ga0070698_100023040 3300005471 Bacteria 6511
28 Ga0070698_100208703 3300005471 Bacteria 1888
29 Ga0070699_100003145 3300005518 Bacteria 14605
30 Ga0070684_100027558 3300005535 Bacteria 4797
31 Ga0081455_10000005 3300005937 Bacteria 327136
32 Ga0081538_10000695 3300005981 Bacteria 36955
33 Ga0081538_10006935 3300005981 Bacteria 9856
34 Ga0081538_10011745 3300005981 Bacteria 7066
35 Ga0081538_10012744 3300005981 Bacteria 6715
36 Ga0081538_10016435 3300005981 Bacteria 5672
37 Ga0081539_10000911 3300005985 Bacteria 55934
38 Ga0081539_10026136 3300005985 Bacteria 3737
39 Ga0081539_10030683 3300005985 Bacteria 3331
40 Ga0075432_10001226 3300006058 Bacteria 8251
41 Ga0070716_100016394 3300006173 Bacteria 3823
42 Ga0070712_100033156 3300006175 Bacteria 3492
43 Ga0075427_10004953 3300006194 Bacteria 1885
44 Ga0075428_100022635 3300006844 Bacteria 6957
45 Ga0075428_100361376 3300006844 Bacteria 1557
46 Ga0075430_100025858 3300006846 Bacteria 4995
47 Ga0075430_100078546 3300006846 Bacteria 2766
48 Ga0075431_100019825 3300006847 Bacteria 6865
49 Ga0075431_100030622 3300006847 Bacteria 5544
50 Ga0075431_100037138 3300006847 Bacteria 5020
51 Ga0075433_10009005 3300006852 Bacteria 7971
52 Ga0075434_100030214 3300006871 Bacteria 5334
53 Ga0075434_100309603 3300006871 Bacteria 1600
54 Ga0075429_100013258 3300006880 Bacteria 7148
55 Ga0075429_100221949 3300006880 Bacteria 1655
56 Ga0075435_100125367 3300007076 Bacteria 2146
57 Ga0105240_10243653 3300009093 Bacteria 2083
58 Ga0111539_10009810 3300009094 Bacteria 12085
59 Ga0111539_10875354 3300009094 Bacteria 1045
60 Ga0114129_10007962 3300009147 Bacteria 15086
61 Ga0114129_10111894 3300009147 Bacteria 3767
62 Ga0114129_10362487 3300009147 Bacteria 1917
63 Ga0157369_10103092 3300013105 Bacteria 3039
64 Ga0206354_11443263 3300020081 Bacteria 1799
65 Ga0206353_11078049 3300020082 Bacteria 1874
66 Ga0213875_10002416 3300021388 Bacteria 11224
67 Ga0213875_10007714 3300021388 Bacteria 5540
68 Ga0213875_10089811 3300021388 Bacteria 1433
69 Ga0207699_10022669 3300025906 Bacteria 3407
70 Ga0207684_10030069 3300025910 Bacteria 4624
71 Ga0207684_10218488 3300025910 Bacteria 1645
72 Ga0207684_10321733 3300025910 Bacteria 1333
73 Ga0207707_10009439 3300025912 Bacteria 8462
74 Ga0207693_10036107 3300025915 Bacteria 3895
75 Ga0207660_10057581 3300025917 Bacteria 2784
76 Ga0207646_10014564 3300025922 Bacteria 7460
77 Ga0207646_10036344 3300025922 Bacteria 4446
78 Ga0207646_10301271 3300025922 Bacteria 1448
79 Ga0207646_10360642 3300025922 Bacteria 1313
80 Ga0207700_10283774 3300025928 Bacteria 1425
81 Ga0207664_10389577 3300025929 Bacteria 1238
82 Ga0207664_10574431 3300025929 Bacteria 1012
83 Ga0207665_10014907 3300025939 Bacteria 5108
84 Ga0207428_10003273 3300027907 Bacteria 15765
85 Ga0307413_10215440 3300031824 Bacteria 1398
86 Ga0307407_10347913 3300031903 Bacteria 1049
87 Ga0307416_100021585 3300032002 Bacteria 4627
88 Ga0307416_100047379 3300032002 Bacteria 3402
89 Ga0373954_0006157 3300035118 Bacteria 5227
90 Ga0373956_0001208 3300035119 Bacteria 10692
91 Ga0373956_0201020 3300035119 Bacteria 944
92 Ga0373935_0027084 3300035692 Bacteria 3544
93 Ga0373933_0008362 3300035724 Bacteria 5651
94 Ga0373933_0048193 3300035724 Bacteria 2536
95 Ga0373947_0074654 3300035725 Bacteria 2087
96 Ga0373937_0044270 3300036401 Bacteria 4064
97 Ga0395898_0225193 3300037466 Bacteria 1789
98 Ga0395905_0070051 3300037471 Bacteria 3286
99 Ga0395905_0235832 3300037471 Bacteria 1710
100 Ga0436364_0250831 3300037853 Bacteria 29989
101 Ga0436364_0272541 3300037853 Bacteria 3575
102 Ga0436364_0645972 3300037853 Bacteria 5783
103 Ga0436364_0829584 3300037853 Bacteria 1473
104 Ga0436364_1528529 3300037853 Bacteria 2652
105 Ga0395901_0019212 3300038443 Bacteria 6986
106 Ga0395901_0224129 3300038443 Bacteria 1964
107 Ga0395901_0237593 3300038443 Bacteria 1901
108 Ga0436365_1218460 3300039437 Bacteria 5518
109 Ga0436365_1840904 3300039437 Bacteria 7992
110 Ga0466961_0110119 3300044693 Bacteria 1733
111 Ga0466963_0063599 3300044694 Bacteria 2470
112 Ga0466964_0047145 3300044706 Bacteria 1758
113 Ga0466967_0038397 3300045976 Bacteria 4107
114 Ga0466967_0134783 3300045976 Bacteria 2296
115 Ga0495651_0010251 3300046462 Bacteria 7195
116 Ga0495664_0083609 3300046477 Bacteria 1915
117 Ga0495618_0139359 3300046514 Bacteria 1552
118 Ga0495640_0017479 3300046533 Bacteria 5345
119 Ga0495635_0012751 3300046663 Bacteria 5889
120 Ga0495657_0003042 3300046675 Bacteria 13879
121 Ga0495674_0033132 3300047319 Bacteria 4682
122 Ga0495674_0077498 3300047319 Bacteria 2858
123 Ga0495680_0018167 3300047322 Bacteria 5980
124 Ga0496108_0103387 3300048911 Bacteria 2431
125 Ga0501032_0001059 3300049569 Bacteria 21988
126 Ga0501036_0012927 3300049572 Bacteria 6933
127 Ga0501037_0000982 3300049573 Bacteria 21204
128 Ga0501038_0132593 3300049574 Bacteria 2044
129 Ga0501039_0004173 3300049575 Bacteria 10877
130 Ga0501039_0159521 3300049575 Bacteria 1773
131 Ga0501039_0229049 3300049575 Bacteria 1461
132 Ga0501040_0184549 3300049576 Bacteria 1479
133 Ga0501043_0002277 3300049579 Bacteria 16316
134 Ga0501047_0512312 3300049581 Bacteria 1026
135 Ga0501070_0010189 3300049586 Bacteria 7953
136 Ga0501072_0018445 3300049588 Bacteria 5374
137 Ga0501073_0073912 3300049589 Bacteria 2373
138 Ga0501079_0565615 3300049741 Bacteria 894
139 Ga0501044_0076476 3300049823 Bacteria 3397
140 Ga0501045_0043634 3300049824 Bacteria 3266
141 nmdc:mga05p37_276234_c1 3300050507 Bacteria 2006
142 nmdc:mga05p37_47356_c1 3300050507 Bacteria 5288
143 nmdc:mga09592_2847_c1 3300050508 Bacteria 14027
144 nmdc:mga09592_9629_c1 3300050508 Bacteria 7851
145 nmdc:mga0qj67_39413_c1 3300050509 Bacteria 3710
146 nmdc:mga0qj67_52365_c1 3300050509 Bacteria 3231
147 nmdc:mga06r32_8337_c1 3300050510 Bacteria 9330
148 nmdc:mga06r32_9114_c1 3300050510 Bacteria 8946
149 nmdc:mga08y16_41604_c1 3300050511 Bacteria 4814
150 nmdc:mga08y16_745723_c1 3300050511 Bacteria 976
151 nmdc:mga0rr50_115120_c1 3300050513 Bacteria 2133
152 nmdc:mga0a205_16183_c1 3300050515 Bacteria 6984
153 Ga0495619_0308572 3300053085 Bacteria 1096
154 Ga0501084_0073752 3300054114 Bacteria 2858
155 Ga0590074_007098 3300059423 Bacteria 1860
156 Ga0590077_002322 3300059426 Bacteria 4103
157 Ga0530510_0143791 3300061734 Bacteria 1758
158 Ga0530510_0489654 3300061734 Bacteria 932
159 2537901177 2537561592 Bacteria 4348607
160 2586063322 2585427649 Bacteria 9053857
161 2676483204 2675903059 Bacteria 8644972
162 2884699430 2884693830 Bacteria 11273186
163 2891401943 2891395885 Bacteria 9251614
164 2895450131 2895442618 Bacteria 11027144
165 2895662501 2895660088 Bacteria 3782833
166 2899361739 2899359706 Bacteria 10940472
167 8053951552 8053945823 Bacteria 8962862
168 Ga0395899_0094369
169 JGI25406J46586_10004562
170 JGI25407J50210_10007991
171 JGI25407J50210_10022423
172 Ga0070683_100066002
173 Ga0070680_100214152
174 Ga0070682_100393467
175 Ga0070692_10171871
176 Ga0070709_10008255
177 Ga0070714_100043442
178 Ga0070714_100061502
179 Ga0070714_100249199
180 Ga0070714_100276364
181 Ga0070714_100566650
182 Ga0070713_100129148
183 Ga0070710_10018086
184 Ga0070708_100192509
185 Ga0070681_10004481
186 Ga0070706_100038918
187 Ga0070706_100154521
188 Ga0070706_100281947
189 Ga0070706_100380818
190 Ga0070707_100173757
191 Ga0070707_100273315
192 Ga0070707_100278316
193 Ga0070698_100016865
194 Ga0070698_100023040
195 Ga0070698_100208703
196 Ga0070699_100003145
197 Ga0070684_100027558
198 Ga0081455_10000005
199 Ga0081538_10000695
200 Ga0081538_10006935
201 Ga0081538_10011745
202 Ga0081538_10012744
203 Ga0081538_10016435
204 Ga0081539_10000911
205 Ga0081539_10026136
206 Ga0081539_10030683
207 Ga0075432_10001226
208 Ga0070716_100016394
209 Ga0070712_100033156
210 Ga0075427_10004953
211 Ga0075428_100022635
212 Ga0075428_100361376
213 Ga0075430_100025858
214 Ga0075430_100078546
215 Ga0075431_100019825
216 Ga0075431_100030622
217 Ga0075431_100037138
218 Ga0075433_10009005
219 Ga0075434_100030214
220 Ga0075434_100309603
221 Ga0075429_100013258
222 Ga0075429_100221949
223 Ga0075435_100125367
224 Ga0105240_10243653
225 Ga0111539_10009810
226 Ga0111539_10875354
227 Ga0114129_10007962
228 Ga0114129_10111894
229 Ga0114129_10362487
230 Ga0157369_10103092
231 Ga0206354_11443263
232 Ga0206353_11078049
233 Ga0213875_10002416
234 Ga0213875_10007714
235 Ga0213875_10089811
236 Ga0207699_10022669
237 Ga0207684_10030069
238 Ga0207684_10218488
239 Ga0207684_10321733
240 Ga0207707_10009439
241 Ga0207693_10036107
242 Ga0207660_10057581
243 Ga0207646_10014564
244 Ga0207646_10036344
245 Ga0207646_10301271
246 Ga0207646_10360642
247 Ga0207700_10283774
248 Ga0207664_10389577
249 Ga0207664_10574431
250 Ga0207665_10014907
251 Ga0207428_10003273
252 Ga0307413_10215440
253 Ga0307407_10347913
254 Ga0307416_100021585
255 Ga0307416_100047379
256 Ga0373954_0006157
257 Ga0373956_0001208
258 Ga0373956_0201020
259 Ga0373935_0027084
260 Ga0373933_0008362
261 Ga0373933_0048193
262 Ga0373947_0074654
263 Ga0373937_0044270
264 Ga0395898_0225193
265 Ga0395905_0070051
266 Ga0395905_0235832
267 Ga0436364_0250831
268 Ga0436364_0272541
269 Ga0436364_0645972
270 Ga0436364_0829584
271 Ga0436364_1528529
272 Ga0395901_0019212
273 Ga0395901_0224129
274 Ga0395901_0237593
275 Ga0436365_1218460
276 Ga0436365_1840904
277 Ga0466961_0110119
278 Ga0466963_0063599
279 Ga0466964_0047145
280 Ga0466967_0038397
281 Ga0466967_0134783
282 Ga0495651_0010251
283 Ga0495664_0083609
284 Ga0495618_0139359
285 Ga0495640_0017479
286 Ga0495635_0012751
287 Ga0495657_0003042
288 Ga0495674_0033132
289 Ga0495674_0077498
290 Ga0495680_0018167
291 Ga0496108_0103387
292 Ga0501032_0001059
293 Ga0501036_0012927
294 Ga0501037_0000982
295 Ga0501038_0132593
296 Ga0501039_0004173
297 Ga0501039_0159521
298 Ga0501039_0229049
299 Ga0501040_0184549
300 Ga0501043_0002277
301 Ga0501047_0512312
302 Ga0501070_0010189
303 Ga0501072_0018445
304 Ga0501073_0073912
305 Ga0501079_0565615
306 Ga0501044_0076476
307 Ga0501045_0043634
308 nmdc:mga05p37_276234_c1
309 nmdc:mga05p37_47356_c1
310 nmdc:mga09592_2847_c1
311 nmdc:mga09592_9629_c1
312 nmdc:mga0qj67_39413_c1
313 nmdc:mga0qj67_52365_c1
314 nmdc:mga06r32_8337_c1
315 nmdc:mga06r32_9114_c1
316 nmdc:mga08y16_41604_c1
317 nmdc:mga08y16_745723_c1
318 nmdc:mga0rr50_115120_c1
319 nmdc:mga0a205_16183_c1
320 Ga0495619_0308572
321 Ga0501084_0073752
322 Ga0590074_007098
323 Ga0590077_002322
324 Ga0530510_0143791
325 Ga0530510_0489654
326 2537901177
327 2586063322
328 2676483204
329 2884699430
330 2891401943
331 2895450131
332 2895662501
333 2899361739
334 8053951552

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08281

Sigma70_r4_2

Sigma-70, region 4

136

189

0.96

PF04542

Sigma70_r2

Sigma-70 region 2

37

103

0.92

Map