F250511

General Info

Members Datasets Scaffolds Average Seq Length
167 124 334 264

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10022307|Ga0157378_100223073
Length 311
Sequence MEHALMTHLRWRTRGTSEASKAGASEMHSARSQTVASSTMAIEASTHSMQFDLTLSYPQWQGSGRHENLPRGAAAAAEVCARYAPLSRVPPTGSDAGKSHGVNRWEAIFAQFRSAQEILARSGARRVLTAGGDCAVDVAVIAHLRGIHPQLRVIWIDAHLDGNTPDTSPSGNFHGMPVSAILGRAPEPMRPLLGTPIDPARFHYFGIRVGDDGDWALQRELDLQVLHAQANIDGPVHIHFDLDALDPREFPYVAYPEGNVGIEDAIALLKRVAHQADIVGLTITEFAPADDDEAGKGSKVIARICEAAINP

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
83 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
84 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
92 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
93 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
94 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
95 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
96 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
97 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
98 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
99 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
100 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
101 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
102 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
103 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
106 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
109 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
118 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
119 2643221559 Lysobacter sp. Root559 Isolate Unclassified
120 2643221586 Lysobacter sp. Root667 Isolate Unclassified
121 2643221612 Lysobacter sp. Root76 Isolate Unclassified
122 2643221720 Lysobacter sp. Root916 Isolate Unclassified
123 2643221727 Lysobacter sp. Root96 Isolate Unclassified
124 2643221728 Lysobacter sp. Root983 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.41
Metatranscriptomes 0
Isolates 3.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.95
Nodule 0
Rhizoplane 1.2
Rhizosphere 63.47
Stem 0
Stem Tuber 0
Unclassified 8.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_10022307 3300013297 Bacteria 5573
2 JGI24737J22298_10001819 3300001990 Bacteria 7643
3 JGI25151J46595_10012165 3300003187 Bacteria 3922
4 JGI25151J46595_10059988 3300003187 Bacteria 1220
5 rootH1_10004097 3300003316 Bacteria 1449
6 Ga0055526_1010427 3300003771 Bacteria 4323
7 Ga0055524_1008509 3300003775 Bacteria 4256
8 Ga0055524_1014618 3300003775 Bacteria 2900
9 Ga0055536_1002498 3300003781 Bacteria 10321
10 Ga0055536_1006769 3300003781 Bacteria 5248
11 Ga0055536_1010358 3300003781 Bacteria 3713
12 Ga0055528_1029147 3300003790 Bacteria 1502
13 Ga0055530_10004333 3300003791 Bacteria 7383
14 Ga0055531_10000421 3300003794 Bacteria 40086
15 Ga0055531_10000673 3300003794 Bacteria 29231
16 Ga0055531_10002689 3300003794 Bacteria 11706
17 Ga0055531_10003668 3300003794 Bacteria 9676
18 Ga0055531_10005603 3300003794 Bacteria 7311
19 Ga0070658_10045348 3300005327 Bacteria 3555
20 Ga0070670_100217182 3300005331 Unclassified 1663
21 Ga0068869_100037454 3300005334 Unclassified 3448
22 Ga0070666_10094706 3300005335 Unclassified 2054
23 Ga0068868_100097609 3300005338 Unclassified 2375
24 Ga0070660_100271867 3300005339 Bacteria 1385
25 Ga0070669_100044398 3300005353 Bacteria 3239
26 Ga0070659_100005959 3300005366 Bacteria 8788
27 Ga0070678_100089811 3300005456 Unclassified 2353
28 Ga0070662_100068094 3300005457 Bacteria 2616
29 Ga0068853_100016068 3300005539 Bacteria 6156
30 Ga0068853_100580633 3300005539 Unclassified 1063
31 Ga0070672_100010374 3300005543 Bacteria 6461
32 Ga0070693_100101030 3300005547 Bacteria 1757
33 Ga0070665_100045786 3300005548 Unclassified 4393
34 Ga0070665_100356994 3300005548 Bacteria 1467
35 Ga0068854_100000323 3300005578 Bacteria 31550
36 Ga0068856_100003811 3300005614 Bacteria 15113
37 Ga0068852_100012089 3300005616 Bacteria 6536
38 Ga0068859_100044102 3300005617 Bacteria 4482
39 Ga0068863_100127283 3300005841 Bacteria 2431
40 Ga0068863_100603490 3300005841 Bacteria 1086
41 Ga0068860_100002598 3300005843 Bacteria 18898
42 Ga0068862_100000076 3300005844 Bacteria 117053
43 Ga0097621_100010128 3300006237 Bacteria 6881
44 Ga0097621_100015563 3300006237 Bacteria 5728
45 Ga0068871_100143185 3300006358 Bacteria 2034
46 Ga0068865_100050926 3300006881 Bacteria 2863
47 Ga0097620_100044102 3300006931 Bacteria 4482
48 Ga0105245_10001517 3300009098 Bacteria 21010
49 Ga0105243_10058733 3300009148 Bacteria 3066
50 Ga0105238_10037937 3300009551 Bacteria 4897
51 Ga0105238_10215621 3300009551 Bacteria 1896
52 Ga0105239_10009862 3300010375 Bacteria 10729
53 Ga0157371_10297920 3300013102 Bacteria 1167
54 Ga0157378_10000033 3300013297 Bacteria 120764
55 Ga0157378_10069921 3300013297 Bacteria 3150
56 Ga0157372_10271497 3300013307 Bacteria 1971
57 Ga0157372_10621451 3300013307 Unclassified 1259
58 Ga0157376_10001921 3300014969 Bacteria 13876
59 Ga0163161_10111139 3300017792 Bacteria 2049
60 Ga0209673_1005003 3300025273 Bacteria 6857
61 Ga0209130_1004264 3300025284 Bacteria 5536
62 Ga0209675_1024625 3300025291 Bacteria 1533
63 Ga0209675_1041975 3300025291 Bacteria 994
64 Ga0209676_1000235 3300025292 Bacteria 119060
65 Ga0209676_1000848 3300025292 Bacteria 39512
66 Ga0209676_1000865 3300025292 Bacteria 38935
67 Ga0209676_1001669 3300025292 Bacteria 19275
68 Ga0209676_1001918 3300025292 Bacteria 16835
69 Ga0209025_1000401 3300025294 Bacteria 88709
70 Ga0209025_1061166 3300025294 Bacteria 1407
71 Ga0209564_1024120 3300025295 Bacteria 2087
72 Ga0209050_1000829 3300025298 Bacteria 42838
73 Ga0209050_1002826 3300025298 Bacteria 13846
74 Ga0209256_1000441 3300025299 Bacteria 63697
75 Ga0209256_1005257 3300025299 Bacteria 7557
76 Ga0207426_1023530 3300025302 Bacteria 2100
77 Ga0209051_1006677 3300025303 Bacteria 6453
78 Ga0209257_1000065 3300025304 Bacteria 353604
79 Ga0209257_1000078 3300025304 Bacteria 317483
80 Ga0209257_1000400 3300025304 Bacteria 84778
81 Ga0209257_1003794 3300025304 Bacteria 12449
82 Ga0209257_1010426 3300025304 Bacteria 4706
83 Ga0207656_10124083 3300025321 Bacteria 1205
84 Ga0207645_10040667 3300025907 Bacteria 2977
85 Ga0207643_10100993 3300025908 Unclassified 1692
86 Ga0207657_10206781 3300025919 Bacteria 1577
87 Ga0207694_10031419 3300025924 Bacteria 4056
88 Ga0207650_10157774 3300025925 Unclassified 1795
89 Ga0207687_10000734 3300025927 Bacteria 22251
90 Ga0207690_10001614 3300025932 Bacteria 14047
91 Ga0207706_10357208 3300025933 Bacteria 1270
92 Ga0207709_10050403 3300025935 Bacteria 2546
93 Ga0207704_10014750 3300025938 Bacteria 3958
94 Ga0207704_10034407 3300025938 Unclassified 2891
95 Ga0207691_10011296 3300025940 Bacteria 8569
96 Ga0207689_10045170 3300025942 Unclassified 3643
97 Ga0207668_10176357 3300025972 Bacteria 1681
98 Ga0207668_10316542 3300025972 Bacteria 1293
99 Ga0207640_10000615 3300025981 Bacteria 20997
100 Ga0207677_10134860 3300026023 Bacteria 1880
101 Ga0207639_10048286 3300026041 Bacteria 3221
102 Ga0207639_10237937 3300026041 Bacteria 1581
103 Ga0207678_10009520 3300026067 Bacteria 8549
104 Ga0207702_10029731 3300026078 Bacteria 4548
105 Ga0207641_10062473 3300026088 Bacteria 3179
106 Ga0207648_10102008 3300026089 Unclassified 2515
107 Ga0207674_10067629 3300026116 Bacteria 3596
108 Ga0207683_10036328 3300026121 Bacteria 4289
109 Ga0207698_10123881 3300026142 Bacteria 2194
110 Ga0268266_10319290 3300028379 Bacteria 1453
111 Ga0268265_10000998 3300028380 Bacteria 25722
112 Ga0307515_10273182 3300028794 Unclassified 1408
113 Ga0314311_1262381 3300030733 Bacteria 3651
114 Ga0307513_10001365 3300031456 Bacteria 35245
115 Ga0307513_10109234 3300031456 Bacteria 2764
116 Ga0307516_10025422 3300031730 Bacteria 6030
117 Ga0307516_10171222 3300031730 Bacteria 1912
118 Ga0307516_10412418 3300031730 Unclassified 1009
119 Ga0307413_10130975 3300031824 Bacteria 1717
120 Ga0307507_10042156 3300033179 Bacteria 4555
121 Ga0307510_10010697 3300033180 Bacteria 10907
122 Ga0395899_0146579 3300037312 Bacteria 1676
123 Ga0395905_0022221 3300037471 Bacteria 6002
124 Ga0395905_0042055 3300037471 Bacteria 4287
125 Ga0395905_0285225 3300037471 Bacteria 1538
126 Ga0395901_0225313 3300038443 Bacteria 1958
127 Ga0439436_0001838 3300041404 Bacteria 6263
128 Ga0439436_0014978 3300041404 Bacteria 2335
129 Ga0439465_0007356 3300041413 Bacteria 3497
130 Ga0439465_0023720 3300041413 Bacteria 1931
131 Ga0451795_0517400 3300041456 Bacteria 2165
132 Ga0451841_0740232 3300041498 Bacteria 1266
133 Ga0451841_1081642 3300041498 Bacteria 1618
134 Ga0439431_0033010 3300041997 Bacteria 1293
135 Ga0439433_0013717 3300041999 Bacteria 1781
136 Ga0439445_0007934 3300042004 Bacteria 2475
137 Ga0439448_0004171 3300042005 Bacteria 4068
138 Ga0439432_003736 3300042006 Bacteria 5625
139 Ga0439432_029794 3300042006 Bacteria 1772
140 Ga0439449_0001228 3300042007 Bacteria 10048
141 Ga0439449_0009371 3300042007 Bacteria 3713
142 Ga0439449_0012470 3300042007 Bacteria 3195
143 Ga0439449_0013546 3300042007 Bacteria 3068
144 Ga0439458_0000965 3300042157 Bacteria 7382
145 Ga0439434_0074886 3300042435 Bacteria 1069
146 Ga0495627_025119 3300046453 Bacteria 1934
147 Ga0495650_0000027 3300046471 Bacteria 475071
148 Ga0495671_0053253 3300046692 Bacteria 2009
149 Ga0495681_0057143 3300047470 Bacteria 1813
150 Ga0496114_0786937 3300048917 Bacteria 830
151 Ga0496122_0023899 3300048925 Bacteria 5366
152 Ga0496123_0020094 3300048926 Bacteria 5239
153 Ga0501032_0103733 3300049569 Bacteria 1884
154 Ga0501043_0017295 3300049579 Bacteria 5656
155 Ga0501047_0068238 3300049581 Bacteria 3425
156 Ga0501070_0260664 3300049586 Bacteria 1417
157 Ga0501073_0359354 3300049589 Bacteria 1006
158 Ga0501225_0007543 3300049705 Bacteria 3150
159 Ga0501044_0154656 3300049823 Bacteria 2273
160 Ga0500595_046705 3300053119 Bacteria 1360
161 Ga0500568_0001022 3300053139 Bacteria 19143
162 2643818840 2643221559 Bacteria 4424915
163 2643941092 2643221586 Bacteria 4446529
164 2644079867 2643221612 Bacteria 4361984
165 2644660339 2643221720 Bacteria 4694283
166 2644695463 2643221727 Bacteria 4415595
167 2644697698 2643221728 Bacteria 4797149
168 Ga0157378_10022307
169 JGI24737J22298_10001819
170 JGI25151J46595_10012165
171 JGI25151J46595_10059988
172 rootH1_10004097
173 Ga0055526_1010427
174 Ga0055524_1008509
175 Ga0055524_1014618
176 Ga0055536_1002498
177 Ga0055536_1006769
178 Ga0055536_1010358
179 Ga0055528_1029147
180 Ga0055530_10004333
181 Ga0055531_10000421
182 Ga0055531_10000673
183 Ga0055531_10002689
184 Ga0055531_10003668
185 Ga0055531_10005603
186 Ga0070658_10045348
187 Ga0070670_100217182
188 Ga0068869_100037454
189 Ga0070666_10094706
190 Ga0068868_100097609
191 Ga0070660_100271867
192 Ga0070669_100044398
193 Ga0070659_100005959
194 Ga0070678_100089811
195 Ga0070662_100068094
196 Ga0068853_100016068
197 Ga0068853_100580633
198 Ga0070672_100010374
199 Ga0070693_100101030
200 Ga0070665_100045786
201 Ga0070665_100356994
202 Ga0068854_100000323
203 Ga0068856_100003811
204 Ga0068852_100012089
205 Ga0068859_100044102
206 Ga0068863_100127283
207 Ga0068863_100603490
208 Ga0068860_100002598
209 Ga0068862_100000076
210 Ga0097621_100010128
211 Ga0097621_100015563
212 Ga0068871_100143185
213 Ga0068865_100050926
214 Ga0097620_100044102
215 Ga0105245_10001517
216 Ga0105243_10058733
217 Ga0105238_10037937
218 Ga0105238_10215621
219 Ga0105239_10009862
220 Ga0157371_10297920
221 Ga0157378_10000033
222 Ga0157378_10069921
223 Ga0157372_10271497
224 Ga0157372_10621451
225 Ga0157376_10001921
226 Ga0163161_10111139
227 Ga0209673_1005003
228 Ga0209130_1004264
229 Ga0209675_1024625
230 Ga0209675_1041975
231 Ga0209676_1000235
232 Ga0209676_1000848
233 Ga0209676_1000865
234 Ga0209676_1001669
235 Ga0209676_1001918
236 Ga0209025_1000401
237 Ga0209025_1061166
238 Ga0209564_1024120
239 Ga0209050_1000829
240 Ga0209050_1002826
241 Ga0209256_1000441
242 Ga0209256_1005257
243 Ga0207426_1023530
244 Ga0209051_1006677
245 Ga0209257_1000065
246 Ga0209257_1000078
247 Ga0209257_1000400
248 Ga0209257_1003794
249 Ga0209257_1010426
250 Ga0207656_10124083
251 Ga0207645_10040667
252 Ga0207643_10100993
253 Ga0207657_10206781
254 Ga0207694_10031419
255 Ga0207650_10157774
256 Ga0207687_10000734
257 Ga0207690_10001614
258 Ga0207706_10357208
259 Ga0207709_10050403
260 Ga0207704_10014750
261 Ga0207704_10034407
262 Ga0207691_10011296
263 Ga0207689_10045170
264 Ga0207668_10176357
265 Ga0207668_10316542
266 Ga0207640_10000615
267 Ga0207677_10134860
268 Ga0207639_10048286
269 Ga0207639_10237937
270 Ga0207678_10009520
271 Ga0207702_10029731
272 Ga0207641_10062473
273 Ga0207648_10102008
274 Ga0207674_10067629
275 Ga0207683_10036328
276 Ga0207698_10123881
277 Ga0268266_10319290
278 Ga0268265_10000998
279 Ga0307515_10273182
280 Ga0314311_1262381
281 Ga0307513_10001365
282 Ga0307513_10109234
283 Ga0307516_10025422
284 Ga0307516_10171222
285 Ga0307516_10412418
286 Ga0307413_10130975
287 Ga0307507_10042156
288 Ga0307510_10010697
289 Ga0395899_0146579
290 Ga0395905_0022221
291 Ga0395905_0042055
292 Ga0395905_0285225
293 Ga0395901_0225313
294 Ga0439436_0001838
295 Ga0439436_0014978
296 Ga0439465_0007356
297 Ga0439465_0023720
298 Ga0451795_0517400
299 Ga0451841_0740232
300 Ga0451841_1081642
301 Ga0439431_0033010
302 Ga0439433_0013717
303 Ga0439445_0007934
304 Ga0439448_0004171
305 Ga0439432_003736
306 Ga0439432_029794
307 Ga0439449_0001228
308 Ga0439449_0009371
309 Ga0439449_0012470
310 Ga0439449_0013546
311 Ga0439458_0000965
312 Ga0439434_0074886
313 Ga0495627_025119
314 Ga0495650_0000027
315 Ga0495671_0053253
316 Ga0495681_0057143
317 Ga0496114_0786937
318 Ga0496122_0023899
319 Ga0496123_0020094
320 Ga0501032_0103733
321 Ga0501043_0017295
322 Ga0501047_0068238
323 Ga0501070_0260664
324 Ga0501073_0359354
325 Ga0501225_0007543
326 Ga0501044_0154656
327 Ga0500595_046705
328 Ga0500568_0001022
329 2643818840
330 2643941092
331 2644079867
332 2644660339
333 2644695463
334 2644697698

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00491

Arginase

Arginase family

92

310

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hqx-assembly1.cif.gz_A r308k arginase variant 0.8381 8 265
2rla-assembly1.cif.gz_A altering the binuclear manganese cluster of arginase diminishes thermostability and catalytic function 0.8373 8 265
1zpe-assembly1.cif.gz_A arginase i covalently modified with butylamine at q19c 0.8366 8 264
1hqg-assembly1.cif.gz_A crystal structure of the h141c arginase variant complexed with products ornithine and urea 0.8288 8 264
6ksy-assembly2.cif.gz_C-2 crystal structure of arginase from zymomonas mobilis zm4 0.8241 8 250
ID Description Score Start End Superfamily
3rlaC00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8249 8 265 3.40.800.10
af_Q54HV8_34_294_3.40.800.10 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.818 40 250 3.40.800.10
4iu1A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8157 8 265 3.40.800.10
6nfpA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8049 8 265 3.40.800.10
3sl0A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8029 8 265 3.40.800.10
ID Description Score Start End GO Terms
AF-A0A7W8D716-F1-model_v4 Arginase family enzyme 0.9737 108 265 GO:0004053
GO:0005737
GO:0019547
GO:0030145
AF-A0A7W8D716-F1-model_v4 Arginase family enzyme 0.9617 108 265 GO:0004053
GO:0005737
GO:0019547
GO:0030145
AF-A0A095B008-F1-model_v4 Arginase (EC 3.5.3.1) 0.9496 1 263 GO:0004053
GO:0005829
GO:0019547
GO:0030145
AF-A0A095B008-F1-model_v4 Arginase (EC 3.5.3.1) 0.939 1 263 GO:0004053
GO:0005829
GO:0019547
GO:0030145
AF-A0A848QF38-F1-model_v4 deleted 0.9367 41 265

Map