F250206
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 167 | 101 | 334 | 862 |
Family's Representative Sequence
| Representative Sequence | 3300006028|Ga0070717_10020299|Ga0070717_100202996 |
| Length | 896 |
| Sequence | VPGLGTSFGRGGATTFQQDLQNADCIVIMGSNMAENHPVGFQWVMEARERGAKIIHVDPRFTRTSAMATKHVGIRAGSDIAFLGGIANYILEHDLYFREYVQHYTNAPVIIDERFVDTEDADGLFSGWDPEAGRYDIESWRYEGMNVHGPAGQRGEGFAPRGEQSGHGAAGGGLEHGEPPAEDPELEHPRCVLQILKRHFQRYTPELVAETCGCSAEDFLEVCETLVANSGRERTSAVCYAVGWTQHTTGVQTIRTAAIIQQLLGNIGRPGGGILALRGHASIQGSTDIPTLFNILPGYLPMPHTLSYPTLSRFIESNTAPTGWWGKFESYWVSLMKAYFGEHATAENDWLFEELPRVDSDNSAYFTVRQMLEGNVSGYIIAGENPAVGHANGKAHRLGLAKLDWLVVRDLVEIESAAFWYDSPEIESGELKTEEIATEIFFLPAAAHTEKDGSFTNTQRLLQWHRKAVDPKQDCRSELWFYFHLGRLIKQKLADSEEERDTLIKALRWEYPTHSAIEEPDAEAVLQEISGREIASGKFLSGYPELAADGSTLCGCWIYSGCFADGINQTARRKPRWEQTSYVAPEWAWAWPANRRLIYNRASADPEGKPWSERKRYVWWDGDEGKWTGHDVPDFKEDKEPGYVPPDGARAEDAIAGDHPFIMQADGRAWLYAAQGLEDGPLPTHYEPQESPFANPLYSQRANPRRQQNTGLAEDPYNPVADEPGAEVYPYIVTTYRLTEHHTAGGMTRTVPHLAELQPEMFCEVHPGLAREVGLEHGGWATIYTSRSAIEARVLVTERVRPLRMQDGRTVHQVGLPYHWGRRGLVTGDSANDLAHMALDPNVHIQEVKAFTCGIRPGRRPRGAELPRFVAELREQAHSRSEQDPSVETEPATEPT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 15 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 16 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 21 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 22 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 23 | 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 24 | 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 25 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 26 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 27 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 28 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 40 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 41 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 42 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 43 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 44 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 45 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 46 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 47 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 48 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 49 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 50 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 51 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 52 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 53 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 54 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 55 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 56 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 57 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 58 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 59 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 82 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 83 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 84 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 85 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 86 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 87 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 88 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 89 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 90 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 91 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 92 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 93 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 94 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 96 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 97 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 98 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 99 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.41 |
| Metatranscriptomes | 6.59 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 9.58 |
| Rhizosphere | 89.82 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070717_10020299 | 3300006028 | Bacteria | 5223 |
| 2 | Ga0070658_10003570 | 3300005327 | Bacteria | 12764 |
| 3 | Ga0070683_100001067 | 3300005329 | Bacteria | 20582 |
| 4 | Ga0070660_100003046 | 3300005339 | Bacteria | 11532 |
| 5 | Ga0070691_10022342 | 3300005341 | Bacteria | 2934 |
| 6 | Ga0070671_100002698 | 3300005355 | Bacteria | 13767 |
| 7 | Ga0070714_100049698 | 3300005435 | Bacteria | 3570 |
| 8 | Ga0070714_100082934 | 3300005435 | Bacteria | 2794 |
| 9 | Ga0070713_100040392 | 3300005436 | Bacteria | 3792 |
| 10 | Ga0070710_10016051 | 3300005437 | Bacteria | 3802 |
| 11 | Ga0070663_100006179 | 3300005455 | Bacteria | 7175 |
| 12 | Ga0070679_100064349 | 3300005530 | Bacteria | 3655 |
| 13 | Ga0070684_100011746 | 3300005535 | Bacteria | 6985 |
| 14 | Ga0070684_100019826 | 3300005535 | Bacteria | 5570 |
| 15 | Ga0070696_100016632 | 3300005546 | Bacteria | 4958 |
| 16 | Ga0068855_100003198 | 3300005563 | Bacteria | 20059 |
| 17 | Ga0081539_10000913 | 3300005985 | Bacteria | 55913 |
| 18 | Ga0081539_10011519 | 3300005985 | Bacteria | 6978 |
| 19 | Ga0081539_10020218 | 3300005985 | Bacteria | 4514 |
| 20 | Ga0070717_10020375 | 3300006028 | Bacteria | 5214 |
| 21 | Ga0070717_10079155 | 3300006028 | Bacteria | 2755 |
| 22 | Ga0105240_10026176 | 3300009093 | Bacteria | 7655 |
| 23 | Ga0105237_10037695 | 3300009545 | Bacteria | 4885 |
| 24 | Ga0105239_10029922 | 3300010375 | Bacteria | 5989 |
| 25 | Ga0157369_10005853 | 3300013105 | Bacteria | 14285 |
| 26 | Ga0157369_10018107 | 3300013105 | Bacteria | 7901 |
| 27 | Ga0157369_10029411 | 3300013105 | Bacteria | 6071 |
| 28 | Ga0182008_10002370 | 3300014497 | Bacteria | 11855 |
| 29 | Ga0197907_10778632 | 3300020069 | Bacteria | 4563 |
| 30 | Ga0206356_10071597 | 3300020070 | Bacteria | 3666 |
| 31 | Ga0206356_11186003 | 3300020070 | Bacteria | 3540 |
| 32 | Ga0206349_1554559 | 3300020075 | Bacteria | 3349 |
| 33 | Ga0206351_10245048 | 3300020077 | Bacteria | 4645 |
| 34 | Ga0206351_10632130 | 3300020077 | Bacteria | 2941 |
| 35 | Ga0206350_10089985 | 3300020080 | Bacteria | 4384 |
| 36 | Ga0206350_10397215 | 3300020080 | Bacteria | 4366 |
| 37 | Ga0206350_11029235 | 3300020080 | Bacteria | 3294 |
| 38 | Ga0213875_10001861 | 3300021388 | Bacteria | 13118 |
| 39 | Ga0224712_10001330 | 3300022467 | Bacteria | 5633 |
| 40 | Ga0224712_10002289 | 3300022467 | Bacteria | 4693 |
| 41 | Ga0207695_10029951 | 3300025913 | Bacteria | 6002 |
| 42 | Ga0207671_10042486 | 3300025914 | Bacteria | 3365 |
| 43 | Ga0207693_10004102 | 3300025915 | Bacteria | 12377 |
| 44 | Ga0207660_10036311 | 3300025917 | Bacteria | 3425 |
| 45 | Ga0207657_10006098 | 3300025919 | Bacteria | 12535 |
| 46 | Ga0207657_10014250 | 3300025919 | Bacteria | 7771 |
| 47 | Ga0207700_10000021 | 3300025928 | Bacteria | 168335 |
| 48 | Ga0207665_10006162 | 3300025939 | Bacteria | 7964 |
| 49 | Ga0207661_10002551 | 3300025944 | Bacteria | 12530 |
| 50 | Ga0207661_10011582 | 3300025944 | Bacteria | 6398 |
| 51 | Ga0207667_10008656 | 3300025949 | Bacteria | 12068 |
| 52 | Ga0207702_10003752 | 3300026078 | Bacteria | 13733 |
| 53 | Ga0207702_10034731 | 3300026078 | Bacteria | 4217 |
| 54 | Ga0207683_10000623 | 3300026121 | Bacteria | 32551 |
| 55 | Ga0373951_0000464 | 3300035091 | Bacteria | 11707 |
| 56 | Ga0373947_0002888 | 3300035725 | Bacteria | 10259 |
| 57 | Ga0373937_0001058 | 3300036401 | Bacteria | 23217 |
| 58 | Ga0373925_0018299 | 3300037068 | Bacteria | 5092 |
| 59 | Ga0395899_0003825 | 3300037312 | Bacteria | 11881 |
| 60 | Ga0395899_0019825 | 3300037312 | Bacteria | 5103 |
| 61 | Ga0395899_0025995 | 3300037312 | Bacteria | 4417 |
| 62 | Ga0395899_0053153 | 3300037312 | Bacteria | 3000 |
| 63 | Ga0395900_0020845 | 3300037418 | Bacteria | 6698 |
| 64 | Ga0395900_0047423 | 3300037418 | Bacteria | 4423 |
| 65 | Ga0395898_0005622 | 3300037466 | Bacteria | 13513 |
| 66 | Ga0395898_0015753 | 3300037466 | Bacteria | 7747 |
| 67 | Ga0395898_0018341 | 3300037466 | Bacteria | 7136 |
| 68 | Ga0395905_0003343 | 3300037471 | Bacteria | 17209 |
| 69 | Ga0395905_0014915 | 3300037471 | Bacteria | 7413 |
| 70 | Ga0395905_0029579 | 3300037471 | Bacteria | 5162 |
| 71 | Ga0395905_0090810 | 3300037471 | Bacteria | 2864 |
| 72 | Ga0395901_0003541 | 3300038443 | Bacteria | 15737 |
| 73 | Ga0395901_0004815 | 3300038443 | Bacteria | 13618 |
| 74 | Ga0395901_0007170 | 3300038443 | Bacteria | 11246 |
| 75 | Ga0395901_0019959 | 3300038443 | Bacteria | 6857 |
| 76 | Ga0395901_0021589 | 3300038443 | Bacteria | 6596 |
| 77 | Ga0395901_0028099 | 3300038443 | Bacteria | 5785 |
| 78 | Ga0395901_0057145 | 3300038443 | Bacteria | 4058 |
| 79 | Ga0395901_0096284 | 3300038443 | Bacteria | 3102 |
| 80 | Ga0436360_0730041 | 3300039438 | Bacteria | 11070 |
| 81 | Ga0466969_0005923 | 3300044656 | Bacteria | 6503 |
| 82 | Ga0466966_0001849 | 3300044684 | Bacteria | 13724 |
| 83 | Ga0466966_0005429 | 3300044684 | Bacteria | 8380 |
| 84 | Ga0466966_0015542 | 3300044684 | Bacteria | 5031 |
| 85 | Ga0466961_0012710 | 3300044693 | Bacteria | 5393 |
| 86 | Ga0466961_0043571 | 3300044693 | Bacteria | 2873 |
| 87 | Ga0466963_0001677 | 3300044694 | Bacteria | 12065 |
| 88 | Ga0466963_0001787 | 3300044694 | Bacteria | 11699 |
| 89 | Ga0466963_0002070 | 3300044694 | Bacteria | 11073 |
| 90 | Ga0466963_0008098 | 3300044694 | Bacteria | 6293 |
| 91 | Ga0466963_0010499 | 3300044694 | Bacteria | 5607 |
| 92 | Ga0466963_0011237 | 3300044694 | Bacteria | 5448 |
| 93 | Ga0466963_0039730 | 3300044694 | Bacteria | 3082 |
| 94 | Ga0466964_0001978 | 3300044706 | Bacteria | 7190 |
| 95 | Ga0466964_0003371 | 3300044706 | Bacteria | 5823 |
| 96 | Ga0466957_0002519 | 3300044842 | Bacteria | 9854 |
| 97 | Ga0466960_0009187 | 3300044901 | Bacteria | 4069 |
| 98 | Ga0466959_0015927 | 3300045049 | Bacteria | 5485 |
| 99 | Ga0466959_0018021 | 3300045049 | Bacteria | 5180 |
| 100 | Ga0466958_0001966 | 3300045836 | Bacteria | 10102 |
| 101 | Ga0466958_0002535 | 3300045836 | Bacteria | 9206 |
| 102 | Ga0466958_0009450 | 3300045836 | Bacteria | 5433 |
| 103 | Ga0466958_0021463 | 3300045836 | Bacteria | 3775 |
| 104 | Ga0466958_0026836 | 3300045836 | Bacteria | 3405 |
| 105 | Ga0466967_0000040 | 3300045976 | Bacteria | 46660 |
| 106 | Ga0466967_0000122 | 3300045976 | Bacteria | 29237 |
| 107 | Ga0466967_0016102 | 3300045976 | Bacteria | 5884 |
| 108 | Ga0466967_0028003 | 3300045976 | Bacteria | 4696 |
| 109 | Ga0466967_0032064 | 3300045976 | Bacteria | 4432 |
| 110 | Ga0466967_0033039 | 3300045976 | Bacteria | 4376 |
| 111 | Ga0466967_0048853 | 3300045976 | Bacteria | 3697 |
| 112 | Ga0466967_0051665 | 3300045976 | Bacteria | 3603 |
| 113 | Ga0466967_0071517 | 3300045976 | Bacteria | 3106 |
| 114 | Ga0466967_0104828 | 3300045976 | Bacteria | 2589 |
| 115 | Ga0495592_0000037 | 3300046454 | Bacteria | 125143 |
| 116 | Ga0495603_0001600 | 3300046455 | Bacteria | 13283 |
| 117 | Ga0495641_0019702 | 3300046461 | Bacteria | 3443 |
| 118 | Ga0495651_0000038 | 3300046462 | Bacteria | 97248 |
| 119 | Ga0495653_0003769 | 3300046463 | Bacteria | 12262 |
| 120 | Ga0495582_0026646 | 3300046473 | Bacteria | 3169 |
| 121 | Ga0495594_0003045 | 3300046499 | Bacteria | 8682 |
| 122 | Ga0495608_0001032 | 3300046511 | Bacteria | 19553 |
| 123 | Ga0495618_0001122 | 3300046514 | Bacteria | 18089 |
| 124 | Ga0495628_0000025 | 3300046516 | Bacteria | 127935 |
| 125 | Ga0495652_0000088 | 3300046529 | Bacteria | 98865 |
| 126 | Ga0495652_0035460 | 3300046529 | Bacteria | 4342 |
| 127 | Ga0495587_0000502 | 3300046536 | Bacteria | 27283 |
| 128 | Ga0495645_0000024 | 3300046543 | Bacteria | 125065 |
| 129 | Ga0495599_0000019 | 3300046678 | Bacteria | 141108 |
| 130 | Ga0495623_0000032 | 3300046679 | Bacteria | 84435 |
| 131 | Ga0495646_0001414 | 3300046680 | Bacteria | 14283 |
| 132 | Ga0495613_0003615 | 3300046689 | Bacteria | 11589 |
| 133 | Ga0495581_0031481 | 3300047315 | Bacteria | 3074 |
| 134 | Ga0495604_0000476 | 3300047317 | Bacteria | 35284 |
| 135 | Ga0495676_0034238 | 3300047321 | Bacteria | 4264 |
| 136 | Ga0495675_0000007 | 3300047444 | Bacteria | 162640 |
| 137 | Ga0495602_0000246 | 3300048088 | Bacteria | 50728 |
| 138 | Ga0495602_0031595 | 3300048088 | Bacteria | 5003 |
| 139 | Ga0496102_0011322 | 3300048905 | Bacteria | 7686 |
| 140 | Ga0496103_0022094 | 3300048906 | Bacteria | 3830 |
| 141 | Ga0496104_0062690 | 3300048907 | Bacteria | 3525 |
| 142 | Ga0496105_0000042 | 3300048908 | Bacteria | 114886 |
| 143 | Ga0496105_0047586 | 3300048908 | Bacteria | 3539 |
| 144 | Ga0496106_0006175 | 3300048909 | Bacteria | 8858 |
| 145 | Ga0496107_0000801 | 3300048910 | Bacteria | 18242 |
| 146 | Ga0496108_0010850 | 3300048911 | Bacteria | 7396 |
| 147 | Ga0496109_0002867 | 3300048912 | Bacteria | 14419 |
| 148 | Ga0496109_0016832 | 3300048912 | Bacteria | 6398 |
| 149 | Ga0496110_0000135 | 3300048913 | Bacteria | 42562 |
| 150 | Ga0496110_0038017 | 3300048913 | Bacteria | 4186 |
| 151 | Ga0496111_0002763 | 3300048914 | Bacteria | 10674 |
| 152 | Ga0496111_0006465 | 3300048914 | Bacteria | 7613 |
| 153 | Ga0496111_0045465 | 3300048914 | Bacteria | 3159 |
| 154 | Ga0496114_0017530 | 3300048917 | Bacteria | 5782 |
| 155 | Ga0501034_0038034 | 3300049571 | Bacteria | 4874 |
| 156 | Ga0501039_0077834 | 3300049575 | Bacteria | 2579 |
| 157 | Ga0501070_0000104 | 3300049586 | Bacteria | 74572 |
| 158 | Ga0501070_0002653 | 3300049586 | Bacteria | 15605 |
| 159 | Ga0501070_0014089 | 3300049586 | Bacteria | 6732 |
| 160 | Ga0501072_0003555 | 3300049588 | Bacteria | 11729 |
| 161 | Ga0501079_0012269 | 3300049741 | Bacteria | 6539 |
| 162 | Ga0501080_0015596 | 3300049742 | Bacteria | 7008 |
| 163 | Ga0501083_0000892 | 3300049744 | Bacteria | 19786 |
| 164 | Ga0495601_0000325 | 3300053077 | Bacteria | 25289 |
| 165 | Ga0495601_0002577 | 3300053077 | Bacteria | 10308 |
| 166 | Ga0495619_0001347 | 3300053085 | Bacteria | 16107 |
| 167 | Ga0466962_0000583 | 3300061719 | Bacteria | 16067 |
| 168 | Ga0070717_10020299 | |||
| 169 | Ga0070658_10003570 | |||
| 170 | Ga0070683_100001067 | |||
| 171 | Ga0070660_100003046 | |||
| 172 | Ga0070691_10022342 | |||
| 173 | Ga0070671_100002698 | |||
| 174 | Ga0070714_100049698 | |||
| 175 | Ga0070714_100082934 | |||
| 176 | Ga0070713_100040392 | |||
| 177 | Ga0070710_10016051 | |||
| 178 | Ga0070663_100006179 | |||
| 179 | Ga0070679_100064349 | |||
| 180 | Ga0070684_100011746 | |||
| 181 | Ga0070684_100019826 | |||
| 182 | Ga0070696_100016632 | |||
| 183 | Ga0068855_100003198 | |||
| 184 | Ga0081539_10000913 | |||
| 185 | Ga0081539_10011519 | |||
| 186 | Ga0081539_10020218 | |||
| 187 | Ga0070717_10020375 | |||
| 188 | Ga0070717_10079155 | |||
| 189 | Ga0105240_10026176 | |||
| 190 | Ga0105237_10037695 | |||
| 191 | Ga0105239_10029922 | |||
| 192 | Ga0157369_10005853 | |||
| 193 | Ga0157369_10018107 | |||
| 194 | Ga0157369_10029411 | |||
| 195 | Ga0182008_10002370 | |||
| 196 | Ga0197907_10778632 | |||
| 197 | Ga0206356_10071597 | |||
| 198 | Ga0206356_11186003 | |||
| 199 | Ga0206349_1554559 | |||
| 200 | Ga0206351_10245048 | |||
| 201 | Ga0206351_10632130 | |||
| 202 | Ga0206350_10089985 | |||
| 203 | Ga0206350_10397215 | |||
| 204 | Ga0206350_11029235 | |||
| 205 | Ga0213875_10001861 | |||
| 206 | Ga0224712_10001330 | |||
| 207 | Ga0224712_10002289 | |||
| 208 | Ga0207695_10029951 | |||
| 209 | Ga0207671_10042486 | |||
| 210 | Ga0207693_10004102 | |||
| 211 | Ga0207660_10036311 | |||
| 212 | Ga0207657_10006098 | |||
| 213 | Ga0207657_10014250 | |||
| 214 | Ga0207700_10000021 | |||
| 215 | Ga0207665_10006162 | |||
| 216 | Ga0207661_10002551 | |||
| 217 | Ga0207661_10011582 | |||
| 218 | Ga0207667_10008656 | |||
| 219 | Ga0207702_10003752 | |||
| 220 | Ga0207702_10034731 | |||
| 221 | Ga0207683_10000623 | |||
| 222 | Ga0373951_0000464 | |||
| 223 | Ga0373947_0002888 | |||
| 224 | Ga0373937_0001058 | |||
| 225 | Ga0373925_0018299 | |||
| 226 | Ga0395899_0003825 | |||
| 227 | Ga0395899_0019825 | |||
| 228 | Ga0395899_0025995 | |||
| 229 | Ga0395899_0053153 | |||
| 230 | Ga0395900_0020845 | |||
| 231 | Ga0395900_0047423 | |||
| 232 | Ga0395898_0005622 | |||
| 233 | Ga0395898_0015753 | |||
| 234 | Ga0395898_0018341 | |||
| 235 | Ga0395905_0003343 | |||
| 236 | Ga0395905_0014915 | |||
| 237 | Ga0395905_0029579 | |||
| 238 | Ga0395905_0090810 | |||
| 239 | Ga0395901_0003541 | |||
| 240 | Ga0395901_0004815 | |||
| 241 | Ga0395901_0007170 | |||
| 242 | Ga0395901_0019959 | |||
| 243 | Ga0395901_0021589 | |||
| 244 | Ga0395901_0028099 | |||
| 245 | Ga0395901_0057145 | |||
| 246 | Ga0395901_0096284 | |||
| 247 | Ga0436360_0730041 | |||
| 248 | Ga0466969_0005923 | |||
| 249 | Ga0466966_0001849 | |||
| 250 | Ga0466966_0005429 | |||
| 251 | Ga0466966_0015542 | |||
| 252 | Ga0466961_0012710 | |||
| 253 | Ga0466961_0043571 | |||
| 254 | Ga0466963_0001677 | |||
| 255 | Ga0466963_0001787 | |||
| 256 | Ga0466963_0002070 | |||
| 257 | Ga0466963_0008098 | |||
| 258 | Ga0466963_0010499 | |||
| 259 | Ga0466963_0011237 | |||
| 260 | Ga0466963_0039730 | |||
| 261 | Ga0466964_0001978 | |||
| 262 | Ga0466964_0003371 | |||
| 263 | Ga0466957_0002519 | |||
| 264 | Ga0466960_0009187 | |||
| 265 | Ga0466959_0015927 | |||
| 266 | Ga0466959_0018021 | |||
| 267 | Ga0466958_0001966 | |||
| 268 | Ga0466958_0002535 | |||
| 269 | Ga0466958_0009450 | |||
| 270 | Ga0466958_0021463 | |||
| 271 | Ga0466958_0026836 | |||
| 272 | Ga0466967_0000040 | |||
| 273 | Ga0466967_0000122 | |||
| 274 | Ga0466967_0016102 | |||
| 275 | Ga0466967_0028003 | |||
| 276 | Ga0466967_0032064 | |||
| 277 | Ga0466967_0033039 | |||
| 278 | Ga0466967_0048853 | |||
| 279 | Ga0466967_0051665 | |||
| 280 | Ga0466967_0071517 | |||
| 281 | Ga0466967_0104828 | |||
| 282 | Ga0495592_0000037 | |||
| 283 | Ga0495603_0001600 | |||
| 284 | Ga0495641_0019702 | |||
| 285 | Ga0495651_0000038 | |||
| 286 | Ga0495653_0003769 | |||
| 287 | Ga0495582_0026646 | |||
| 288 | Ga0495594_0003045 | |||
| 289 | Ga0495608_0001032 | |||
| 290 | Ga0495618_0001122 | |||
| 291 | Ga0495628_0000025 | |||
| 292 | Ga0495652_0000088 | |||
| 293 | Ga0495652_0035460 | |||
| 294 | Ga0495587_0000502 | |||
| 295 | Ga0495645_0000024 | |||
| 296 | Ga0495599_0000019 | |||
| 297 | Ga0495623_0000032 | |||
| 298 | Ga0495646_0001414 | |||
| 299 | Ga0495613_0003615 | |||
| 300 | Ga0495581_0031481 | |||
| 301 | Ga0495604_0000476 | |||
| 302 | Ga0495676_0034238 | |||
| 303 | Ga0495675_0000007 | |||
| 304 | Ga0495602_0000246 | |||
| 305 | Ga0495602_0031595 | |||
| 306 | Ga0496102_0011322 | |||
| 307 | Ga0496103_0022094 | |||
| 308 | Ga0496104_0062690 | |||
| 309 | Ga0496105_0000042 | |||
| 310 | Ga0496105_0047586 | |||
| 311 | Ga0496106_0006175 | |||
| 312 | Ga0496107_0000801 | |||
| 313 | Ga0496108_0010850 | |||
| 314 | Ga0496109_0002867 | |||
| 315 | Ga0496109_0016832 | |||
| 316 | Ga0496110_0000135 | |||
| 317 | Ga0496110_0038017 | |||
| 318 | Ga0496111_0002763 | |||
| 319 | Ga0496111_0006465 | |||
| 320 | Ga0496111_0045465 | |||
| 321 | Ga0496114_0017530 | |||
| 322 | Ga0501034_0038034 | |||
| 323 | Ga0501039_0077834 | |||
| 324 | Ga0501070_0000104 | |||
| 325 | Ga0501070_0002653 | |||
| 326 | Ga0501070_0014089 | |||
| 327 | Ga0501072_0003555 | |||
| 328 | Ga0501079_0012269 | |||
| 329 | Ga0501080_0015596 | |||
| 330 | Ga0501083_0000892 | |||
| 331 | Ga0495601_0000325 | |||
| 332 | Ga0495601_0002577 | |||
| 333 | Ga0495619_0001347 | |||
| 334 | Ga0466962_0000583 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1kqf-assembly1.cif.gz_A | formate dehydrogenase n from e. coli | 0.8601 | 6 | 893 |
| 1ici-assembly1.cif.gz_A | crystal structure of a sir2 homolog-nad complex | 0.8569 | 20 | 71 |
| 6sdr-assembly1.cif.gz_A | w-formate dehydrogenase from desulfovibrio vulgaris - oxidized form | 0.8559 | 6 | 893 |
| 8cm4-assembly2.cif.gz_C | w-formate dehydrogenase c872a from desulfovibrio vulgaris - exposed to oxygen | 0.8547 | 6 | 893 |
| 8cm7-assembly1.cif.gz_A | w-formate dehydrogenase m405a from desulfovibrio vulgaris | 0.852 | 1 | 893 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1kqgA03 | Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 | 0.9128 | 6 | 313 | 3.40.228.10 |
| 2iv2X03 | Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 | 0.9018 | 11 | 309 | 3.40.228.10 |
| 3ir7A07 | Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 | 0.8799 | 16 | 77 | 3.40.228.10 |
| 2v45A03 | Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 | 0.8631 | 16 | 312 | 3.40.228.10 |
| 1iciA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.8569 | 20 | 71 | 3.40.50.1220 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A381KMC7-F1-model_v4 | Formate dehydrogenase h (EC 1.17.1.9) | 0.9145 | 15 | 313 |
GO:0003954
GO:0008863 GO:0016020 GO:0022904 |
| AF-A0A7C6KR80-F1-model_v4 | Molybdopterin-dependent oxidoreductase | 0.9128 | 16 | 95 |
GO:0016491
GO:0046872 GO:0051536 |
| AF-A0A2J4YUB5-F1-model_v4 | Formate dehydrogenase | 0.909 | 15 | 300 |
GO:0009055
GO:0009061 GO:0016491 GO:0030151 GO:0030313 GO:0051539 |
| AF-A0A7X4AM85-F1-model_v4 | Molybdopterin-dependent oxidoreductase | 0.9082 | 15 | 313 |
GO:0009055
GO:0009061 GO:0016491 GO:0030151 GO:0030313 GO:0051539 |
| AF-U3LT66-F1-model_v4 | Formate dehydrogenase H subunit alpha (EC 1.1.99.33) | 0.9066 | 15 | 313 |
GO:0003954
GO:0016020 GO:0022904 |