F250044
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 167 | 123 | 166 | 201 |
Family's Representative Sequence
| Representative Sequence | 3300005467|Ga0070706_100028790|Ga0070706_1000287903 |
| Length | 222 |
| Sequence | LRLGLIGCLGALVLVLIIVGIWFIGVRNHLVTLDQAVQAQWAQVENDYQRRYDLIPNLVRTVQGAANFEKSTLEAVVNARSRVGQVQAPAAAGGAPGSQSDLPNNPQAMAQFEAAQAGLSNALSRLLVVVERYPELKSNQNFLELQSQLEGTENRIAVERRRYNEVAQQFNSSVLKFPANIVANMFGFKPKAYFRGVPGSNQAPEVNFQPFGQQPAPATGTR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2842903701 | Olivibacter sp. R-72191 | Isolate | Unclassified |
| 2 | 3300002155 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 | Metagenome | Rhizosphere |
| 3 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 9 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 10 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 27 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 28 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 30 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 32 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 33 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 35 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 37 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 38 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 39 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 40 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 41 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 42 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 43 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 57 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 58 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 79 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 80 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 81 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 82 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 83 | 3300030742 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 | Metagenome | Rhizosphere |
| 84 | 3300030744 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 | Metagenome | Rhizosphere |
| 85 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 86 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 87 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 88 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 89 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 90 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 91 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 92 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 93 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 94 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 95 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 96 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 97 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 98 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 99 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 100 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 101 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 102 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 103 | 3300041496 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG | Metagenome | Unclassified |
| 104 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 105 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 106 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 107 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 109 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.4 |
| Metatranscriptomes | 0 |
| Isolates | 0.6 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.6 |
| Nodule | 0 |
| Rhizoplane | 1.8 |
| Rhizosphere | 91.62 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 5.99 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24033J26618_1000427 | 3300002155 | Bacteria | 4198 |
| 2 | Ga0065715_10298620 | 3300005293 | Bacteria | 1046 |
| 3 | Ga0065707_10446500 | 3300005295 | Bacteria | 805 |
| 4 | Ga0070683_100000054 | 3300005329 | Bacteria | 87927 |
| 5 | Ga0070683_100250310 | 3300005329 | Unclassified | 1685 |
| 6 | Ga0070670_100000041 | 3300005331 | Bacteria | 147849 |
| 7 | Ga0070670_100079763 | 3300005331 | Unclassified | 2813 |
| 8 | Ga0070677_10120797 | 3300005333 | Bacteria | 1183 |
| 9 | Ga0068869_100313066 | 3300005334 | Bacteria | 1271 |
| 10 | Ga0068869_100470397 | 3300005334 | Bacteria | 1045 |
| 11 | Ga0068868_100002788 | 3300005338 | Bacteria | 12101 |
| 12 | Ga0070661_100001541 | 3300005344 | Bacteria | 16033 |
| 13 | Ga0070675_100000009 | 3300005354 | Bacteria | 245759 |
| 14 | Ga0070675_100789048 | 3300005354 | Bacteria | 868 |
| 15 | Ga0070671_100097394 | 3300005355 | Bacteria | 2467 |
| 16 | Ga0070674_100168867 | 3300005356 | Unclassified | 1666 |
| 17 | Ga0070674_100431058 | 3300005356 | Bacteria | 1084 |
| 18 | Ga0070673_100403114 | 3300005364 | Bacteria | 1223 |
| 19 | Ga0070659_100213125 | 3300005366 | Bacteria | 1592 |
| 20 | Ga0070667_100355627 | 3300005367 | Bacteria | 1327 |
| 21 | Ga0070713_100033701 | 3300005436 | Bacteria | 4106 |
| 22 | Ga0070701_10067027 | 3300005438 | Bacteria | 1909 |
| 23 | Ga0070708_100522017 | 3300005445 | Bacteria | 1120 |
| 24 | Ga0070678_100014959 | 3300005456 | Bacteria | 4915 |
| 25 | Ga0070685_10023631 | 3300005466 | Bacteria | 3368 |
| 26 | Ga0070706_100028790 | 3300005467 | Bacteria | 5116 |
| 27 | Ga0070706_100103482 | 3300005467 | Bacteria | 2647 |
| 28 | Ga0070707_100193782 | 3300005468 | Bacteria | 1981 |
| 29 | Ga0070707_100537496 | 3300005468 | Bacteria | 1131 |
| 30 | Ga0070698_100925493 | 3300005471 | Bacteria | 818 |
| 31 | Ga0070699_100029596 | 3300005518 | Bacteria | 4722 |
| 32 | Ga0070699_100055883 | 3300005518 | Bacteria | 3417 |
| 33 | Ga0070684_100002141 | 3300005535 | Bacteria | 14568 |
| 34 | Ga0070697_100102166 | 3300005536 | Bacteria | 2382 |
| 35 | Ga0070672_100000941 | 3300005543 | Bacteria | 17500 |
| 36 | Ga0070686_100075652 | 3300005544 | Bacteria | 2215 |
| 37 | Ga0070704_100119097 | 3300005549 | Bacteria | 2024 |
| 38 | Ga0068857_100071149 | 3300005577 | Bacteria | 3099 |
| 39 | Ga0068854_100005460 | 3300005578 | Bacteria | 8029 |
| 40 | Ga0070702_100075799 | 3300005615 | Bacteria | 2000 |
| 41 | Ga0068851_10109516 | 3300005834 | Bacteria | 1473 |
| 42 | Ga0070717_10001923 | 3300006028 | Bacteria | 14507 |
| 43 | Ga0070716_100109970 | 3300006173 | Bacteria | 1706 |
| 44 | Ga0070716_100144920 | 3300006173 | Bacteria | 1520 |
| 45 | Ga0075428_100000759 | 3300006844 | Bacteria | 33540 |
| 46 | Ga0075431_100000730 | 3300006847 | Bacteria | 28390 |
| 47 | Ga0075431_100185372 | 3300006847 | Bacteria | 2134 |
| 48 | Ga0075434_100139330 | 3300006871 | Bacteria | 2445 |
| 49 | Ga0075429_100301002 | 3300006880 | Bacteria | 1404 |
| 50 | Ga0075429_100393599 | 3300006880 | Bacteria | 1213 |
| 51 | Ga0075436_100000155 | 3300006914 | Bacteria | 42540 |
| 52 | Ga0075436_100192829 | 3300006914 | Bacteria | 1442 |
| 53 | Ga0075435_100026180 | 3300007076 | Bacteria | 4548 |
| 54 | Ga0075435_100047479 | 3300007076 | Bacteria | 3448 |
| 55 | Ga0075435_100276829 | 3300007076 | Bacteria | 1432 |
| 56 | Ga0105244_10024013 | 3300009036 | Bacteria | 3333 |
| 57 | Ga0105240_10088357 | 3300009093 | Bacteria | 3792 |
| 58 | Ga0111539_10000129 | 3300009094 | Bacteria | 85802 |
| 59 | Ga0105245_10000904 | 3300009098 | Bacteria | 26985 |
| 60 | Ga0105245_10003042 | 3300009098 | Bacteria | 15027 |
| 61 | Ga0105245_10044473 | 3300009098 | Bacteria | 3963 |
| 62 | Ga0114129_10044230 | 3300009147 | Bacteria | 6264 |
| 63 | Ga0105242_10056921 | 3300009176 | Bacteria | 3200 |
| 64 | Ga0105242_10730561 | 3300009176 | Unclassified | 972 |
| 65 | Ga0157369_10006581 | 3300013105 | Bacteria | 13433 |
| 66 | Ga0157374_10059167 | 3300013296 | Bacteria | 3582 |
| 67 | Ga0157378_10057315 | 3300013297 | Bacteria | 3472 |
| 68 | Ga0163162_10020563 | 3300013306 | Bacteria | 6485 |
| 69 | Ga0157372_10447213 | 3300013307 | Bacteria | 1506 |
| 70 | Ga0157372_11981025 | 3300013307 | Bacteria | 669 |
| 71 | Ga0157375_10000035 | 3300013308 | Bacteria | 179166 |
| 72 | Ga0157375_10000303 | 3300013308 | Bacteria | 44672 |
| 73 | Ga0157376_10000049 | 3300014969 | Bacteria | 104672 |
| 74 | Ga0157376_11080972 | 3300014969 | Bacteria | 827 |
| 75 | Ga0213873_10000002 | 3300021358 | Bacteria | 1164195 |
| 76 | Ga0213876_10000010 | 3300021384 | Bacteria | 492549 |
| 77 | Ga0213876_10000012 | 3300021384 | Bacteria | 396530 |
| 78 | Ga0213876_10026831 | 3300021384 | Bacteria | 3039 |
| 79 | Ga0213876_10245100 | 3300021384 | Bacteria | 952 |
| 80 | Ga0207655_1044759 | 3300025728 | Bacteria | 1856 |
| 81 | Ga0207688_10102808 | 3300025901 | Bacteria | 1652 |
| 82 | Ga0207643_10036029 | 3300025908 | Unclassified | 2775 |
| 83 | Ga0207684_10022559 | 3300025910 | Bacteria | 5374 |
| 84 | Ga0207649_10000107 | 3300025920 | Bacteria | 69186 |
| 85 | Ga0207646_10084214 | 3300025922 | Bacteria | 2845 |
| 86 | Ga0207650_10000088 | 3300025925 | Bacteria | 123236 |
| 87 | Ga0207650_10122656 | 3300025925 | Bacteria | 2025 |
| 88 | Ga0207659_10000007 | 3300025926 | Bacteria | 322984 |
| 89 | Ga0207659_10997774 | 3300025926 | Bacteria | 720 |
| 90 | Ga0207687_10000157 | 3300025927 | Bacteria | 45617 |
| 91 | Ga0207687_10001520 | 3300025927 | Bacteria | 15891 |
| 92 | Ga0207700_10039631 | 3300025928 | Bacteria | 3432 |
| 93 | Ga0207644_10054440 | 3300025931 | Bacteria | 2882 |
| 94 | Ga0207686_10062317 | 3300025934 | Bacteria | 2368 |
| 95 | Ga0207665_10142247 | 3300025939 | Bacteria | 1712 |
| 96 | Ga0207665_10177624 | 3300025939 | Bacteria | 1541 |
| 97 | Ga0207665_10527024 | 3300025939 | Unclassified | 915 |
| 98 | Ga0207691_10002608 | 3300025940 | Bacteria | 17602 |
| 99 | Ga0207661_10000001 | 3300025944 | Bacteria | 937688 |
| 100 | Ga0207661_10218405 | 3300025944 | Unclassified | 1684 |
| 101 | Ga0207640_10005065 | 3300025981 | Bacteria | 7171 |
| 102 | Ga0207677_10000089 | 3300026023 | Bacteria | 76102 |
| 103 | Ga0207639_10000003 | 3300026041 | Bacteria | 806887 |
| 104 | Ga0207674_10087292 | 3300026116 | Bacteria | 3113 |
| 105 | Ga0207683_10045531 | 3300026121 | Bacteria | 3837 |
| 106 | Ga0207683_10428385 | 3300026121 | Bacteria | 1219 |
| 107 | Ga0207428_10000189 | 3300027907 | Bacteria | 85810 |
| 108 | Ga0265337_1005076 | 3300028556 | Bacteria | 5313 |
| 109 | Ga0265334_10172123 | 3300028573 | Bacteria | 758 |
| 110 | Ga0316177_1035139 | 3300030731 | Bacteria | 21564 |
| 111 | Ga0316176_1162505 | 3300030732 | Bacteria | 1387 |
| 112 | Ga0316183_1006105 | 3300030742 | Bacteria | 90612 |
| 113 | Ga0316181_1167506 | 3300030744 | Bacteria | 16152 |
| 114 | Ga0265332_10040912 | 3300031238 | Bacteria | 2006 |
| 115 | Ga0265320_10007801 | 3300031240 | Bacteria | 6611 |
| 116 | Ga0265316_10019410 | 3300031344 | Bacteria | 5817 |
| 117 | Ga0307408_100202848 | 3300031548 | Bacteria | 1606 |
| 118 | Ga0307408_100206244 | 3300031548 | Unclassified | 1594 |
| 119 | Ga0265314_10019969 | 3300031711 | Bacteria | 5180 |
| 120 | Ga0316576_10118012 | 3300031727 | Bacteria | 1991 |
| 121 | Ga0316578_10281665 | 3300031728 | Bacteria | 995 |
| 122 | Ga0316577_10037461 | 3300031733 | Bacteria | 2712 |
| 123 | Ga0307412_10000490 | 3300031911 | Bacteria | 23654 |
| 124 | Ga0316583_10004353 | 3300032133 | Bacteria | 5051 |
| 125 | Ga0316583_10014301 | 3300032133 | Bacteria | 2863 |
| 126 | Ga0373932_0000223 | 3300035112 | Bacteria | 16939 |
| 127 | Ga0373943_0290450 | 3300035170 | Bacteria | 926 |
| 128 | Ga0373955_0201453 | 3300035172 | Bacteria | 1185 |
| 129 | Ga0373937_0327466 | 3300036401 | Bacteria | 1450 |
| 130 | Ga0316582_0411856 | 3300036647 | Bacteria | 931 |
| 131 | Ga0316582_0468543 | 3300036647 | Bacteria | 868 |
| 132 | Ga0316584_0197924 | 3300036712 | Bacteria | 1484 |
| 133 | Ga0436365_0203832 | 3300039437 | Bacteria | 1773 |
| 134 | Ga0436365_0597955 | 3300039437 | Bacteria | 8681 |
| 135 | Ga0436365_0800228 | 3300039437 | Bacteria | 36005 |
| 136 | Ga0436365_1718738 | 3300039437 | Bacteria | 73809 |
| 137 | Ga0436362_0768347 | 3300039453 | Bacteria | 63778 |
| 138 | Ga0451839_0506714 | 3300041496 | Bacteria | 1390 |
| 139 | Ga0451577_0137877 | 3300042876 | Bacteria | 2191 |
| 140 | Ga0453683_0003071 | 3300044673 | Bacteria | 12498 |
| 141 | Ga0453683_0076341 | 3300044673 | Bacteria | 2098 |
| 142 | Ga0453683_0119697 | 3300044673 | Bacteria | 1657 |
| 143 | Ga0453684_0000054 | 3300044712 | Bacteria | 543775 |
| 144 | Ga0453684_0006483 | 3300044712 | Bacteria | 22199 |
| 145 | Ga0495620_0000891 | 3300046515 | Bacteria | 18314 |
| 146 | Ga0496102_0396731 | 3300048905 | Bacteria | 1297 |
| 147 | Ga0496108_0361270 | 3300048911 | Bacteria | 1267 |
| 148 | Ga0496109_0078655 | 3300048912 | Bacteria | 3037 |
| 149 | Ga0501033_0001047 | 3300049570 | Bacteria | 25220 |
| 150 | Ga0501038_0046971 | 3300049574 | Bacteria | 3741 |
| 151 | Ga0501067_0013539 | 3300049583 | Bacteria | 4518 |
| 152 | Ga0501073_0003561 | 3300049589 | Bacteria | 11703 |
| 153 | Ga0501080_0008792 | 3300049742 | Bacteria | 9178 |
| 154 | nmdc:mga05p37_296653_c1 | 3300050507 | Bacteria | 1922 |
| 155 | nmdc:mga09592_115925_c1 | 3300050508 | Bacteria | 2299 |
| 156 | nmdc:mga09592_376165_c1 | 3300050508 | Bacteria | 1228 |
| 157 | nmdc:mga06r32_1777_c1 | 3300050510 | Bacteria | 19380 |
| 158 | nmdc:mga06r32_286104_c1 | 3300050510 | Bacteria | 1635 |
| 159 | nmdc:mga08y16_28_c1 | 3300050511 | Bacteria | 201429 |
| 160 | nmdc:mga0rr50_21190_c1 | 3300050513 | Bacteria | 4432 |
| 161 | nmdc:mga0rr50_231218_c1 | 3300050513 | Bacteria | 1530 |
| 162 | nmdc:mga0rr50_53_c1 | 3300050513 | Bacteria | 63727 |
| 163 | nmdc:mga08x19_2211_c1 | 3300050514 | Bacteria | 11889 |
| 164 | nmdc:mga08x19_458_c1 | 3300050514 | Bacteria | 27730 |
| 165 | Ga0495655_0000519 | 3300053083 | Bacteria | 6332 |
| 166 | Ga0500645_017743 | 3300053730 | Bacteria | 2227 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005331 | Ga0070670_100079763 | Ga0070670_1000797633 | 153 |
| 2 | 3300013308 | Ga0157375_10000303 | Ga0157375_1000030343 | 154 |
| 3 | 3300005329 | Ga0070683_100000054 | Ga0070683_10000005441 | 158 |
| 4 | 3300005535 | Ga0070684_100002141 | Ga0070684_1000021413 | 158 |
| 5 | 3300013307 | Ga0157372_10447213 | Ga0157372_104472132 | 158 |
| 6 | 3300021384 | Ga0213876_10000012 | Ga0213876_10000012237 | 158 |
| 7 | 3300025944 | Ga0207661_10000001 | Ga0207661_10000001105 | 158 |
| 8 | 3300035112 | Ga0373932_0000223 | Ga0373932_0000223_6592_7275 | 158 |
| 9 | 3300039437 | Ga0436365_0800228 | Ga0436365_0800228_30749_31408 | 158 |
| 10 | 3300025925 | Ga0207650_10122656 | Ga0207650_101226563 | 159 |
| 11 | 3300021384 | Ga0213876_10245100 | Ga0213876_102451002 | 160 |
| 12 | 3300039437 | Ga0436365_0203832 | Ga0436365_0203832_467_1138 | 160 |
| 13 | 3300009098 | Ga0105245_10003042 | Ga0105245_100030426 | 161 |
| 14 | 3300025927 | Ga0207687_10001520 | Ga0207687_100015206 | 161 |
| 15 | 3300005577 | Ga0068857_100071149 | Ga0068857_1000711492 | 163 |
| 16 | 3300026116 | Ga0207674_10087292 | Ga0207674_100872922 | 163 |
| 17 | 3300026121 | Ga0207683_10428385 | Ga0207683_104283852 | 164 |
| 18 | 3300041496 | Ga0451839_0506714 | Ga0451839_0506714_52_711 | 165 |
| 19 | 3300005438 | Ga0070701_10067027 | Ga0070701_100670272 | 166 |
| 20 | 3300031548 | Ga0307408_100206244 | Ga0307408_1002062443 | 166 |
| 21 | 3300031911 | Ga0307412_10000490 | Ga0307412_1000049022 | 166 |
| 22 | 3300046515 | Ga0495620_0000891 | Ga0495620_0000891_3774_4394 | 166 |
| 23 | 3300005329 | Ga0070683_100250310 | Ga0070683_1002503102 | 168 |
| 24 | 3300025944 | Ga0207661_10218405 | Ga0207661_102184052 | 168 |
| 25 | 3300021358 | Ga0213873_10000002 | Ga0213873_100000021015 | 169 |
| 26 | 3300021384 | Ga0213876_10000010 | Ga0213876_1000001033 | 169 |
| 27 | 3300039437 | Ga0436365_1718738 | Ga0436365_1718738_24510_25145 | 169 |
| 28 | 3300039453 | Ga0436362_0768347 | Ga0436362_0768347_14479_15114 | 169 |
| 29 | 3300032133 | Ga0316583_10004353 | Ga0316583_100043532 | 171 |
| 30 | 3300036647 | Ga0316582_0411856 | Ga0316582_0411856_41_652 | 171 |
| 31 | 3300049570 | Ga0501033_0001047 | Ga0501033_0001047_20860_21489 | 171 |
| 32 | 3300049574 | Ga0501038_0046971 | Ga0501038_0046971_223_852 | 171 |
| 33 | 3300005334 | Ga0068869_100313066 | Ga0068869_1003130662 | 173 |
| 34 | 3300025939 | Ga0207665_10142247 | Ga0207665_101422471 | 173 |
| 35 | 3300025901 | Ga0207688_10102808 | Ga0207688_101028082 | 175 |
| 36 | 3300031344 | Ga0265316_10019410 | Ga0265316_100194105 | 177 |
| 37 | 3300044712 | Ga0453684_0000054 | Ga0453684_0000054_514278_514841 | 177 |
| 38 | 3300044712 | Ga0453684_0006483 | Ga0453684_0006483_8477_9040 | 177 |
| 39 | 3300009036 | Ga0105244_10024013 | Ga0105244_100240133 | 178 |
| 40 | iso_pu_bacteria | 2842903701 | 2842907306 | 178 |
| 41 | 3300005293 | Ga0065715_10298620 | Ga0065715_102986202 | 179 |
| 42 | 3300030731 | Ga0316177_1035139 | Ga0316177_103513910 | 180 |
| 43 | 3300030732 | Ga0316176_1162505 | Ga0316176_11625051 | 180 |
| 44 | 3300030742 | Ga0316183_1006105 | Ga0316183_100610579 | 180 |
| 45 | 3300030744 | Ga0316181_1167506 | Ga0316181_11675066 | 180 |
| 46 | 3300014969 | Ga0157376_11080972 | Ga0157376_110809722 | 181 |
| 47 | 3300031548 | Ga0307408_100202848 | Ga0307408_1002028483 | 181 |
| 48 | 3300005331 | Ga0070670_100000041 | Ga0070670_100000041108 | 183 |
| 49 | 3300005338 | Ga0068868_100002788 | Ga0068868_10000278813 | 183 |
| 50 | 3300005578 | Ga0068854_100005460 | Ga0068854_1000054608 | 183 |
| 51 | 3300013105 | Ga0157369_10006581 | Ga0157369_100065813 | 183 |
| 52 | 3300014969 | Ga0157376_10000049 | Ga0157376_1000004977 | 183 |
| 53 | 3300025925 | Ga0207650_10000088 | Ga0207650_1000008829 | 183 |
| 54 | 3300025981 | Ga0207640_10005065 | Ga0207640_100050653 | 183 |
| 55 | 3300026023 | Ga0207677_10000089 | Ga0207677_1000008936 | 183 |
| 56 | 3300005367 | Ga0070667_100355627 | Ga0070667_1003556272 | 184 |
| 57 | 3300005468 | Ga0070707_100537496 | Ga0070707_1005374962 | 184 |
| 58 | 3300005549 | Ga0070704_100119097 | Ga0070704_1001190972 | 184 |
| 59 | 3300009098 | Ga0105245_10000904 | Ga0105245_1000090414 | 184 |
| 60 | 3300013306 | Ga0163162_10020563 | Ga0163162_100205636 | 184 |
| 61 | 3300025927 | Ga0207687_10000157 | Ga0207687_1000015716 | 184 |
| 62 | 3300025939 | Ga0207665_10527024 | Ga0207665_105270242 | 184 |
| 63 | 3300036401 | Ga0373937_0327466 | Ga0373937_0327466_804_1397 | 184 |
| 64 | 3300048911 | Ga0496108_0361270 | Ga0496108_0361270_70_657 | 184 |
| 65 | 3300048912 | Ga0496109_0078655 | Ga0496109_0078655_153_740 | 184 |
| 66 | 3300049583 | Ga0501067_0013539 | Ga0501067_0013539_3055_3663 | 184 |
| 67 | 3300005354 | Ga0070675_100000009 | Ga0070675_100000009127 | 185 |
| 68 | 3300005355 | Ga0070671_100097394 | Ga0070671_1000973943 | 185 |
| 69 | 3300013307 | Ga0157372_11981025 | Ga0157372_119810251 | 185 |
| 70 | 3300025728 | Ga0207655_1044759 | Ga0207655_10447592 | 185 |
| 71 | 3300025926 | Ga0207659_10000007 | Ga0207659_10000007129 | 185 |
| 72 | 3300025931 | Ga0207644_10054440 | Ga0207644_100544402 | 185 |
| 73 | 3300031727 | Ga0316576_10118012 | Ga0316576_101180123 | 185 |
| 74 | 3300031728 | Ga0316578_10281665 | Ga0316578_102816652 | 185 |
| 75 | 3300031733 | Ga0316577_10037461 | Ga0316577_100374613 | 185 |
| 76 | 3300032133 | Ga0316583_10014301 | Ga0316583_100143013 | 185 |
| 77 | 3300036647 | Ga0316582_0468543 | Ga0316582_0468543_168_758 | 185 |
| 78 | 3300036712 | Ga0316584_0197924 | Ga0316584_0197924_523_1113 | 185 |
| 79 | 3300005334 | Ga0068869_100470397 | Ga0068869_1004703972 | 186 |
| 80 | 3300009176 | Ga0105242_10730561 | Ga0105242_107305612 | 186 |
| 81 | 3300028556 | Ga0265337_1005076 | Ga0265337_10050765 | 186 |
| 82 | 3300028573 | Ga0265334_10172123 | Ga0265334_101721232 | 186 |
| 83 | 3300031238 | Ga0265332_10040912 | Ga0265332_100409122 | 186 |
| 84 | 3300031240 | Ga0265320_10007801 | Ga0265320_100078015 | 186 |
| 85 | 3300031711 | Ga0265314_10019969 | Ga0265314_100199695 | 186 |
| 86 | 3300042876 | Ga0451577_0137877 | Ga0451577_0137877_662_1267 | 186 |
| 87 | 3300044673 | Ga0453683_0003071 | Ga0453683_0003071_518_1123 | 186 |
| 88 | 3300044673 | Ga0453683_0076341 | Ga0453683_0076341_524_1129 | 186 |
| 89 | 3300005354 | Ga0070675_100789048 | Ga0070675_1007890481 | 187 |
| 90 | 3300009098 | Ga0105245_10044473 | Ga0105245_100444733 | 187 |
| 91 | 3300025926 | Ga0207659_10997774 | Ga0207659_109977741 | 187 |
| 92 | 3300035172 | Ga0373955_0201453 | Ga0373955_0201453_73_678 | 188 |
| 93 | 3300006847 | Ga0075431_100185372 | Ga0075431_1001853722 | 189 |
| 94 | 3300007076 | Ga0075435_100026180 | Ga0075435_1000261801 | 189 |
| 95 | 3300050510 | nmdc:mga06r32_286104_c1 | nmdc:mga06r32_286104_c1_643_1278 | 189 |
| 96 | 3300050513 | nmdc:mga0rr50_53_c1 | nmdc:mga0rr50_53_c1_49845_50483 | 189 |
| 97 | 3300050514 | nmdc:mga08x19_2211_c1 | nmdc:mga08x19_2211_c1_3167_3805 | 189 |
| 98 | 3300053083 | Ga0495655_0000519 | Ga0495655_0000519_2299_2982 | 189 |
| 99 | 3300005295 | Ga0065707_10446500 | Ga0065707_104465001 | 190 |
| 100 | 3300005344 | Ga0070661_100001541 | Ga0070661_1000015411 | 190 |
| 101 | 3300005366 | Ga0070659_100213125 | Ga0070659_1002131252 | 190 |
| 102 | 3300005436 | Ga0070713_100033701 | Ga0070713_1000337013 | 190 |
| 103 | 3300005445 | Ga0070708_100522017 | Ga0070708_1005220171 | 190 |
| 104 | 3300005467 | Ga0070706_100103482 | Ga0070706_1001034824 | 190 |
| 105 | 3300005468 | Ga0070707_100193782 | Ga0070707_1001937823 | 190 |
| 106 | 3300005471 | Ga0070698_100925493 | Ga0070698_1009254931 | 190 |
| 107 | 3300005518 | Ga0070699_100029596 | Ga0070699_1000295965 | 190 |
| 108 | 3300005536 | Ga0070697_100102166 | Ga0070697_1001021662 | 190 |
| 109 | 3300006028 | Ga0070717_10001923 | Ga0070717_100019233 | 190 |
| 110 | 3300009176 | Ga0105242_10056921 | Ga0105242_100569213 | 190 |
| 111 | 3300025908 | Ga0207643_10036029 | Ga0207643_100360293 | 190 |
| 112 | 3300025910 | Ga0207684_10022559 | Ga0207684_100225598 | 190 |
| 113 | 3300025920 | Ga0207649_10000107 | Ga0207649_1000010742 | 190 |
| 114 | 3300025922 | Ga0207646_10084214 | Ga0207646_100842143 | 190 |
| 115 | 3300025928 | Ga0207700_10039631 | Ga0207700_100396313 | 190 |
| 116 | 3300025934 | Ga0207686_10062317 | Ga0207686_100623172 | 190 |
| 117 | 3300053730 | Ga0500645_017743 | Ga0500645_017743_1322_1948 | 190 |
| 118 | 3300005356 | Ga0070674_100168867 | Ga0070674_1001688671 | 191 |
| 119 | 3300005544 | Ga0070686_100075652 | Ga0070686_1000756522 | 191 |
| 120 | 3300006844 | Ga0075428_100000759 | Ga0075428_1000007593 | 191 |
| 121 | 3300006914 | Ga0075436_100192829 | Ga0075436_1001928292 | 191 |
| 122 | 3300035170 | Ga0373943_0290450 | Ga0373943_0290450_114_752 | 191 |
| 123 | 3300044673 | Ga0453683_0119697 | Ga0453683_0119697_584_1267 | 191 |
| 124 | 3300049589 | Ga0501073_0003561 | Ga0501073_0003561_1625_2257 | 191 |
| 125 | 3300049742 | Ga0501080_0008792 | Ga0501080_0008792_1810_2442 | 191 |
| 126 | 3300006871 | Ga0075434_100139330 | Ga0075434_1001393302 | 192 |
| 127 | 3300006914 | Ga0075436_100000155 | Ga0075436_10000015512 | 192 |
| 128 | 3300007076 | Ga0075435_100276829 | Ga0075435_1002768292 | 192 |
| 129 | 3300009094 | Ga0111539_10000129 | Ga0111539_1000012979 | 192 |
| 130 | 3300027907 | Ga0207428_10000189 | Ga0207428_1000018979 | 192 |
| 131 | 3300050511 | nmdc:mga08y16_28_c1 | nmdc:mga08y16_28_c1_80823_81479 | 192 |
| 132 | 3300050513 | nmdc:mga0rr50_231218_c1 | nmdc:mga0rr50_231218_c1_542_1168 | 192 |
| 133 | 3300050514 | nmdc:mga08x19_458_c1 | nmdc:mga08x19_458_c1_26154_26780 | 192 |
| 134 | 3300005333 | Ga0070677_10120797 | Ga0070677_101207972 | 193 |
| 135 | 3300005543 | Ga0070672_100000941 | Ga0070672_1000009419 | 193 |
| 136 | 3300005615 | Ga0070702_100075799 | Ga0070702_1000757992 | 193 |
| 137 | 3300005834 | Ga0068851_10109516 | Ga0068851_101095163 | 193 |
| 138 | 3300006173 | Ga0070716_100144920 | Ga0070716_1001449203 | 193 |
| 139 | 3300006847 | Ga0075431_100000730 | Ga0075431_1000007304 | 193 |
| 140 | 3300006880 | Ga0075429_100393599 | Ga0075429_1003935992 | 193 |
| 141 | 3300009093 | Ga0105240_10088357 | Ga0105240_100883573 | 193 |
| 142 | 3300009147 | Ga0114129_10044230 | Ga0114129_100442306 | 193 |
| 143 | 3300013297 | Ga0157378_10057315 | Ga0157378_100573154 | 193 |
| 144 | 3300013308 | Ga0157375_10000035 | Ga0157375_1000003538 | 193 |
| 145 | 3300021384 | Ga0213876_10026831 | Ga0213876_100268313 | 193 |
| 146 | 3300025939 | Ga0207665_10177624 | Ga0207665_101776242 | 193 |
| 147 | 3300025940 | Ga0207691_10002608 | Ga0207691_1000260813 | 193 |
| 148 | 3300026041 | Ga0207639_10000003 | Ga0207639_10000003106 | 193 |
| 149 | 3300039437 | Ga0436365_0597955 | Ga0436365_0597955_1228_1890 | 193 |
| 150 | 3300050507 | nmdc:mga05p37_296653_c1 | nmdc:mga05p37_296653_c1_1027_1698 | 193 |
| 151 | 3300050508 | nmdc:mga09592_376165_c1 | nmdc:mga09592_376165_c1_310_963 | 193 |
| 152 | 3300050510 | nmdc:mga06r32_1777_c1 | nmdc:mga06r32_1777_c1_14693_15346 | 193 |
| 153 | 3300005466 | Ga0070685_10023631 | Ga0070685_100236313 | 194 |
| 154 | 3300006173 | Ga0070716_100109970 | Ga0070716_1001099702 | 194 |
| 155 | 3300006880 | Ga0075429_100301002 | Ga0075429_1003010022 | 194 |
| 156 | 3300007076 | Ga0075435_100047479 | Ga0075435_1000474794 | 194 |
| 157 | 3300050508 | nmdc:mga09592_115925_c1 | nmdc:mga09592_115925_c1_465_1118 | 194 |
| 158 | 3300050513 | nmdc:mga0rr50_21190_c1 | nmdc:mga0rr50_21190_c1_1500_2168 | 194 |
| 159 | 3300005467 | Ga0070706_100028790 | Ga0070706_1000287903 | 195 |
| 160 | 3300005518 | Ga0070699_100055883 | Ga0070699_1000558833 | 195 |
| 161 | 3300048905 | Ga0496102_0396731 | Ga0496102_0396731_573_1244 | 195 |
| 162 | 3300002155 | JGI24033J26618_1000427 | JGI24033J26618_10004271 | 196 |
| 163 | 3300005356 | Ga0070674_100431058 | Ga0070674_1004310582 | 196 |
| 164 | 3300005364 | Ga0070673_100403114 | Ga0070673_1004031141 | 196 |
| 165 | 3300005456 | Ga0070678_100014959 | Ga0070678_1000149591 | 196 |
| 166 | 3300013296 | Ga0157374_10059167 | Ga0157374_100591674 | 196 |
| 167 | 3300026121 | Ga0207683_10045531 | Ga0207683_100455315 | 196 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2etd-assembly1.cif.gz_A | crystal structure of a lema protein (tm0961) from thermotoga maritima msb8 at 2.28 a resolution | 0.9012 | 19 | 177 |
| 2etd-assembly1.cif.gz_A | crystal structure of a lema protein (tm0961) from thermotoga maritima msb8 at 2.28 a resolution | 0.8843 | 19 | 177 |
| 4dwl-assembly1.cif.gz_E | avd molecule from bordetella bacteriophage dgr | 0.649 | 34 | 138 |
| 7rro-assembly1.cif.gz_C5 | structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia | 0.6371 | 16 | 156 |
| 7rro-assembly1.cif.gz_C5 | structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia | 0.6266 | 16 | 156 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q58971_21_189_1.20.1440.20 | Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);LemA-like domain | 0.8326 | 14 | 188 | 1.20.1440.20 |
| af_Q58971_21_189_1.20.1440.20 | Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);LemA-like domain | 0.8106 | 14 | 188 | 1.20.1440.20 |
| af_I6YDV4_1_171_1.10.287.1490 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.7327 | 2 | 177 | 1.10.287.1490 |
| af_I6YDV4_1_171_1.10.287.1490 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.6678 | 2 | 177 | 1.10.287.1490 |
| 4onsC01 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like | 0.6496 | 14 | 117 | 1.20.120.230 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V6BI24-F1-model_v4 | LemA family protein | 0.963 | 2 | 173 |
GO:0016020
|
| AF-A0A351Y496-F1-model_v4 | LemA protein | 0.962 | 2 | 176 |
GO:0016020
|
| AF-A0A1V5SLZ8-F1-model_v4 | LemA family protein | 0.9601 | 2 | 188 |
GO:0016020
|
| AF-A0A4Q3R6K2-F1-model_v4 | LemA family protein | 0.959 | 13 | 189 |
GO:0016020
|
| AF-A0A3P5VPY5-F1-model_v4 | deleted | 0.9587 | 22 | 188 |
|
Predicted Structure (AlphaFold2)
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