F249491

General Info

Members Datasets Scaffolds Average Seq Length
167 127 334 303

Family's Representative Sequence

Representative Sequence 2162886011|MRS1b_contig_9378771|MRS1b_0134.00002570
Length 321
Sequence MLHRADFSREPPMQLGFVSAILPDLSLQEVAAFARTAGYSCVELMCWPPSKAERRYAGVTHVDVTRFGPAEAAEVKQIMAAAGVSISGLGYYPNPLCPDRDESRRYTDHIAKVIQAASLLGVNRVNTFIGRDWTKSVDDNWPRFLEVWRPLIALADQHGVKVGIENCPMLFTKDEWPGGKNLATSPAIWRRMFTDIPSPNFGLNYDPSHMIWQQMDYLQPIREFASRLHHVHAKDVRMDRRKLDEVGILAHPNLYHTPKLPGLGDVNWGQFFSVLSDVGYRWPVCVEVEDRAYEHSLEARKTSLKQSAVYLRQFIADQQIS

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
86 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
97 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
117 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
118 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
119 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
120 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
121 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
122 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
123 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
124 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
127 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.8
Metatranscriptomes 0
Isolates 1.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.6
Nodule 0
Rhizoplane 1.2
Rhizosphere 94.01
Stem 0
Stem Tuber 0
Unclassified 8.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_9378771 2162886011 Bacteria 1306
2 rootH2_10024160 3300003320 Bacteria 8247
3 Ga0065704_10102007 3300005289 Bacteria 2219
4 Ga0065712_10074399 3300005290 Bacteria 4105
5 Ga0065707_10083514 3300005295 Bacteria 8899
6 Ga0070670_100007636 3300005331 Bacteria 9189
7 Ga0070660_100167298 3300005339 Bacteria 1774
8 Ga0070689_100011799 3300005340 Bacteria 6270
9 Ga0070689_100019734 3300005340 Bacteria 4987
10 Ga0070689_100043384 3300005340 Bacteria 3456
11 Ga0070689_100043618 3300005340 Bacteria 3448
12 Ga0070669_100064299 3300005353 Bacteria 2702
13 Ga0070671_100005170 3300005355 Bacteria 10388
14 Ga0070673_100020921 3300005364 Bacteria 4730
15 Ga0070673_100152644 3300005364 Bacteria 1957
16 Ga0070688_100010433 3300005365 Bacteria 5121
17 Ga0070667_100459264 3300005367 Unclassified 1164
18 Ga0070709_10144232 3300005434 Unclassified 1639
19 Ga0070714_100420754 3300005435 Bacteria 1266
20 Ga0070711_100251226 3300005439 Unclassified 1387
21 Ga0070711_100396217 3300005439 Bacteria 1120
22 Ga0070705_100118167 3300005440 Bacteria 1707
23 Ga0070708_100000003 3300005445 Bacteria 189594
24 Ga0070708_100001797 3300005445 Bacteria 16463
25 Ga0070708_100253617 3300005445 Bacteria 1653
26 Ga0070708_100272561 3300005445 Unclassified 1592
27 Ga0070681_10085443 3300005458 Bacteria 3107
28 Ga0070681_10224419 3300005458 Unclassified 1794
29 Ga0070706_100054436 3300005467 Bacteria 3692
30 Ga0070706_100189197 3300005467 Bacteria 1923
31 Ga0070707_100302815 3300005468 Bacteria 1553
32 Ga0070698_100231851 3300005471 Bacteria 1779
33 Ga0070699_100031884 3300005518 Bacteria 4551
34 Ga0068853_100020750 3300005539 Bacteria 5465
35 Ga0068853_100026294 3300005539 Bacteria 4887
36 Ga0070672_100331909 3300005543 Bacteria 1294
37 Ga0070665_100000143 3300005548 Bacteria 133054
38 Ga0070665_100273302 3300005548 Bacteria 1691
39 Ga0068855_100184668 3300005563 Bacteria 2356
40 Ga0070664_100079171 3300005564 Bacteria 2828
41 Ga0068856_100238526 3300005614 Bacteria 1834
42 Ga0068852_100401535 3300005616 Bacteria 1348
43 Ga0068859_100149659 3300005617 Bacteria 2410
44 Ga0068863_100000259 3300005841 Bacteria 55368
45 Ga0068858_100002394 3300005842 Bacteria 18975
46 Ga0068858_100009229 3300005842 Bacteria 9417
47 Ga0075428_100201224 3300006844 Unclassified 2153
48 Ga0075433_10150638 3300006852 Bacteria 2069
49 Ga0075429_100134295 3300006880 Bacteria 2165
50 Ga0097620_100149662 3300006931 Bacteria 2410
51 Ga0105240_10006752 3300009093 Bacteria 16797
52 Ga0111539_10070721 3300009094 Bacteria 4119
53 Ga0105245_10084493 3300009098 Bacteria 2908
54 Ga0105247_10166452 3300009101 Bacteria 1463
55 Ga0114129_10556491 3300009147 Bacteria 1491
56 Ga0105242_10217778 3300009176 Bacteria 1705
57 Ga0105237_10101642 3300009545 Bacteria 2867
58 Ga0105237_10187688 3300009545 Bacteria 2067
59 Ga0105238_10000139 3300009551 Bacteria 80491
60 Ga0105249_10335056 3300009553 Bacteria 1528
61 Ga0105249_10547083 3300009553 Bacteria 1208
62 Ga0105239_10127037 3300010375 Bacteria 2835
63 Ga0105239_10444726 3300010375 Bacteria 1470
64 Ga0157373_10076710 3300013100 Bacteria 2358
65 Ga0157374_10022142 3300013296 Bacteria 5666
66 Ga0157375_10286870 3300013308 Bacteria 1809
67 Ga0157375_10574381 3300013308 Bacteria 1288
68 Ga0163163_10006037 3300014325 Bacteria 10536
69 Ga0163163_10181215 3300014325 Bacteria 2154
70 Ga0163163_10243795 3300014325 Bacteria 1847
71 Ga0157379_10037693 3300014968 Bacteria 4312
72 Ga0157379_10188026 3300014968 Bacteria 1866
73 Ga0228598_1003632 3300024227 Bacteria 3309
74 Ga0207699_10184710 3300025906 Bacteria 1403
75 Ga0207684_10266363 3300025910 Bacteria 1478
76 Ga0207695_10004335 3300025913 Bacteria 19431
77 Ga0207671_10007990 3300025914 Bacteria 9060
78 Ga0207671_10040338 3300025914 Bacteria 3456
79 Ga0207693_10032175 3300025915 Bacteria 4140
80 Ga0207694_10008514 3300025924 Bacteria 7746
81 Ga0207650_10004529 3300025925 Bacteria 9501
82 Ga0207687_10055828 3300025927 Bacteria 2768
83 Ga0207644_10002182 3300025931 Bacteria 12693
84 Ga0207706_10084031 3300025933 Bacteria 2798
85 Ga0207670_10017446 3300025936 Bacteria 4340
86 Ga0207670_10025232 3300025936 Bacteria 3728
87 Ga0207670_10103919 3300025936 Bacteria 2034
88 Ga0207691_10151536 3300025940 Bacteria 2038
89 Ga0207711_10207670 3300025941 Bacteria 1789
90 Ga0207679_10214906 3300025945 Bacteria 1615
91 Ga0207667_10083629 3300025949 Bacteria 3305
92 Ga0207651_10011176 3300025960 Bacteria 5012
93 Ga0207703_10001884 3300026035 Bacteria 18632
94 Ga0207703_10010637 3300026035 Bacteria 7188
95 Ga0207702_10111840 3300026078 Bacteria 2430
96 Ga0207641_10000635 3300026088 Bacteria 38332
97 Ga0207648_10438773 3300026089 Bacteria 1187
98 Ga0268266_10000150 3300028379 Bacteria 132906
99 Ga0268266_10098627 3300028379 Bacteria 2571
100 Ga0268266_10189935 3300028379 Bacteria 1875
101 Ga0265327_10010145 3300031251 Bacteria 6668
102 Ga0373954_0068448 3300035118 Bacteria 1684
103 Ga0373956_0041988 3300035119 Bacteria 2032
104 Ga0373957_0096918 3300035120 Bacteria 1178
105 Ga0373927_0008575 3300035695 Bacteria 6869
106 Ga0373933_0032196 3300035724 Bacteria 3046
107 Ga0373937_0108680 3300036401 Bacteria 2579
108 Ga0436364_0728297 3300037853 Bacteria 1138
109 Ga0451853_0715143 3300041512 Bacteria 1335
110 Ga0451577_0108357 3300042876 Unclassified 2484
111 Ga0451577_0354360 3300042876 Bacteria 1331
112 Ga0451577_0368090 3300042876 Bacteria 1304
113 Ga0453683_0025214 3300044673 Unclassified 3779
114 Ga0453683_0218275 3300044673 Unclassified 1212
115 Ga0453684_0081940 3300044712 Unclassified 4022
116 Ga0453684_0401989 3300044712 Bacteria 1534
117 Ga0495592_0128921 3300046454 Bacteria 1771
118 Ga0495592_0162827 3300046454 Bacteria 1533
119 Ga0495651_0021787 3300046462 Bacteria 4982
120 Ga0495628_0012234 3300046516 Bacteria 7234
121 Ga0495630_0471078 3300046517 Bacteria 963
122 Ga0495652_0093762 3300046529 Bacteria 2450
123 Ga0495640_0302660 3300046533 Bacteria 993
124 Ga0495587_0068805 3300046536 Bacteria 2062
125 Ga0495667_0092497 3300046559 Unclassified 1958
126 Ga0495635_0103887 3300046663 Bacteria 1942
127 Ga0495599_0038008 3300046678 Bacteria 3024
128 Ga0495599_0111322 3300046678 Bacteria 1705
129 Ga0495623_0034125 3300046679 Bacteria 3263
130 Ga0495646_0055777 3300046680 Bacteria 2371
131 Ga0495658_0033927 3300046683 Bacteria 2798
132 Ga0495600_0019751 3300046809 Bacteria 4306
133 Ga0495604_0029416 3300047317 Bacteria 4370
134 Ga0495680_0154833 3300047322 Bacteria 1668
135 Ga0495684_0153805 3300047471 Bacteria 1719
136 Ga0495602_0045616 3300048088 Bacteria 3965
137 Ga0496104_0483187 3300048907 Bacteria 1150
138 Ga0496113_0091649 3300048916 Bacteria 2343
139 Ga0496126_0008382 3300048929 Bacteria 11154
140 Ga0496126_0118973 3300048929 Bacteria 2293
141 Ga0501034_0001714 3300049571 Bacteria 28211
142 Ga0501034_0065569 3300049571 Bacteria 3644
143 Ga0501034_0198473 3300049571 Viruses 1965
144 Ga0501034_0330755 3300049571 Bacteria 1455
145 Ga0501038_0240687 3300049574 Bacteria 1437
146 Ga0501047_0027681 3300049581 Bacteria 5462
147 Ga0501070_0029397 3300049586 Bacteria 4608
148 Ga0501075_0120351 3300049591 Unclassified 1998
149 Ga0501080_0473125 3300049742 Bacteria 1122
150 Ga0501035_0277450 3300049822 Bacteria 1417
151 Ga0501044_0000685 3300049823 Bacteria 40966
152 Ga0501044_0001675 3300049823 Bacteria 26039
153 Ga0501044_0028138 3300049823 Bacteria 5933
154 Ga0501044_0247036 3300049823 Bacteria 1727
155 nmdc:mga09592_23558_c1 3300050508 Bacteria 5086
156 nmdc:mga06r32_288117_c1 3300050510 Unclassified 1629
157 nmdc:mga08y16_169565_c1 3300050511 Bacteria 2267
158 nmdc:mga0n895_966382_c1 3300050512 Unclassified 834
159 nmdc:mga08x19_50528_c1 3300050514 Bacteria 2669
160 Ga0495601_0021078 3300053077 Bacteria 3987
161 Ga0495612_0145394 3300053078 Bacteria 1030
162 Ga0495595_0074260 3300053084 Bacteria 1611
163 Ga0495619_0176589 3300053085 Bacteria 1477
164 Ga0495619_0462061 3300053085 Unclassified 874
165 Ga0500616_0028034 3300053153 Bacteria 3106
166 2687237797 2684623219 Bacteria 8442773
167 2688393430 2687453341 Bacteria 6534136
168 MRS1b_contig_9378771
169 rootH2_10024160
170 Ga0065704_10102007
171 Ga0065712_10074399
172 Ga0065707_10083514
173 Ga0070670_100007636
174 Ga0070660_100167298
175 Ga0070689_100011799
176 Ga0070689_100019734
177 Ga0070689_100043384
178 Ga0070689_100043618
179 Ga0070669_100064299
180 Ga0070671_100005170
181 Ga0070673_100020921
182 Ga0070673_100152644
183 Ga0070688_100010433
184 Ga0070667_100459264
185 Ga0070709_10144232
186 Ga0070714_100420754
187 Ga0070711_100251226
188 Ga0070711_100396217
189 Ga0070705_100118167
190 Ga0070708_100000003
191 Ga0070708_100001797
192 Ga0070708_100253617
193 Ga0070708_100272561
194 Ga0070681_10085443
195 Ga0070681_10224419
196 Ga0070706_100054436
197 Ga0070706_100189197
198 Ga0070707_100302815
199 Ga0070698_100231851
200 Ga0070699_100031884
201 Ga0068853_100020750
202 Ga0068853_100026294
203 Ga0070672_100331909
204 Ga0070665_100000143
205 Ga0070665_100273302
206 Ga0068855_100184668
207 Ga0070664_100079171
208 Ga0068856_100238526
209 Ga0068852_100401535
210 Ga0068859_100149659
211 Ga0068863_100000259
212 Ga0068858_100002394
213 Ga0068858_100009229
214 Ga0075428_100201224
215 Ga0075433_10150638
216 Ga0075429_100134295
217 Ga0097620_100149662
218 Ga0105240_10006752
219 Ga0111539_10070721
220 Ga0105245_10084493
221 Ga0105247_10166452
222 Ga0114129_10556491
223 Ga0105242_10217778
224 Ga0105237_10101642
225 Ga0105237_10187688
226 Ga0105238_10000139
227 Ga0105249_10335056
228 Ga0105249_10547083
229 Ga0105239_10127037
230 Ga0105239_10444726
231 Ga0157373_10076710
232 Ga0157374_10022142
233 Ga0157375_10286870
234 Ga0157375_10574381
235 Ga0163163_10006037
236 Ga0163163_10181215
237 Ga0163163_10243795
238 Ga0157379_10037693
239 Ga0157379_10188026
240 Ga0228598_1003632
241 Ga0207699_10184710
242 Ga0207684_10266363
243 Ga0207695_10004335
244 Ga0207671_10007990
245 Ga0207671_10040338
246 Ga0207693_10032175
247 Ga0207694_10008514
248 Ga0207650_10004529
249 Ga0207687_10055828
250 Ga0207644_10002182
251 Ga0207706_10084031
252 Ga0207670_10017446
253 Ga0207670_10025232
254 Ga0207670_10103919
255 Ga0207691_10151536
256 Ga0207711_10207670
257 Ga0207679_10214906
258 Ga0207667_10083629
259 Ga0207651_10011176
260 Ga0207703_10001884
261 Ga0207703_10010637
262 Ga0207702_10111840
263 Ga0207641_10000635
264 Ga0207648_10438773
265 Ga0268266_10000150
266 Ga0268266_10098627
267 Ga0268266_10189935
268 Ga0265327_10010145
269 Ga0373954_0068448
270 Ga0373956_0041988
271 Ga0373957_0096918
272 Ga0373927_0008575
273 Ga0373933_0032196
274 Ga0373937_0108680
275 Ga0436364_0728297
276 Ga0451853_0715143
277 Ga0451577_0108357
278 Ga0451577_0354360
279 Ga0451577_0368090
280 Ga0453683_0025214
281 Ga0453683_0218275
282 Ga0453684_0081940
283 Ga0453684_0401989
284 Ga0495592_0128921
285 Ga0495592_0162827
286 Ga0495651_0021787
287 Ga0495628_0012234
288 Ga0495630_0471078
289 Ga0495652_0093762
290 Ga0495640_0302660
291 Ga0495587_0068805
292 Ga0495667_0092497
293 Ga0495635_0103887
294 Ga0495599_0038008
295 Ga0495599_0111322
296 Ga0495623_0034125
297 Ga0495646_0055777
298 Ga0495658_0033927
299 Ga0495600_0019751
300 Ga0495604_0029416
301 Ga0495680_0154833
302 Ga0495684_0153805
303 Ga0495602_0045616
304 Ga0496104_0483187
305 Ga0496113_0091649
306 Ga0496126_0008382
307 Ga0496126_0118973
308 Ga0501034_0001714
309 Ga0501034_0065569
310 Ga0501034_0198473
311 Ga0501034_0330755
312 Ga0501038_0240687
313 Ga0501047_0027681
314 Ga0501070_0029397
315 Ga0501075_0120351
316 Ga0501080_0473125
317 Ga0501035_0277450
318 Ga0501044_0000685
319 Ga0501044_0001675
320 Ga0501044_0028138
321 Ga0501044_0247036
322 nmdc:mga09592_23558_c1
323 nmdc:mga06r32_288117_c1
324 nmdc:mga08y16_169565_c1
325 nmdc:mga0n895_966382_c1
326 nmdc:mga08x19_50528_c1
327 Ga0495601_0021078
328 Ga0495612_0145394
329 Ga0495595_0074260
330 Ga0495619_0176589
331 Ga0495619_0462061
332 Ga0500616_0028034
333 2687237797
334 2688393430

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

31

314

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cqj-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with zn2+ 0.8329 13 317
3cqi-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with sulfate 0.8328 13 317
3cqk-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with zn2+ and sulfate 0.8264 13 317
3wqo-assembly1.cif.gz_B crystal structure of d-tagatose 3-epimerase-like protein 0.8251 13 314
3lmz-assembly1.cif.gz_A-2 crystal structure of putative sugar isomerase. (yp_001305105.1) from parabacteroides distasonis atcc 8503 at 1.44 a resolution 0.8234 11 314
ID Description Score Start End Superfamily
af_P45541_1_270_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8414 13 313 3.20.20.150
af_Q58587_1_265_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8412 13 309 3.20.20.150
af_Q2G1E4_1_314_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8406 13 310 3.20.20.150
3lmzA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8396 11 314 3.20.20.150
af_P45541_1_270_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8356 13 313 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A3M1XBH7-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9851 181 314 GO:0016853
AF-A0A6V8P0E6-F1-model_v4 Xylose isomerase-like TIM barrel domain-containing protein 0.9823 185 314
AF-A0A645H4Q4-F1-model_v4 Xylose isomerase-like TIM barrel domain-containing protein 0.9776 215 314
AF-A0A845CC63-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9725 203 314 GO:0016853
AF-A0A2N1Q351-F1-model_v4 AP endonuclease 0.9684 13 314 GO:0004519

Map