F248963

General Info

Members Datasets Scaffolds Average Seq Length
166 119 332 323

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0121812|Ga0451576_0121812_574_1674
Length 366
Sequence MSLKPVGQFPAYRARRLRQSPILRRLVCETDLTAAHLVLPLFARPGRRVRRPISAMPGVFQLSPDQLVREAEQAWNAGVPAVLLFGIPERKDERASGAYSPKGIVQQAVRLLKRELPDLLVITDVCLCEYMSHGHCGIVQRHNGTAQILNDPTLKLLARTAASHVEAGADMVAPSDMMDGRVHAIRQHLDKLGLTNIPIMSYAAKFASAFYGPFREAAESAPQFGDRRSYQMDPANAAEAMREVALDVQEGADIIMVKPALAYLDILYRVKTHFGYPTAAYAVSAEYSMVKAAGANGWIDERAVTLESLLAMRRAGADIIITYAAPQAARWLGEQKLPSPASKPWSQLKARSRAVRNSADHPGSSV

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
56 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
59 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
60 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
61 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
72 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
75 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
76 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
77 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
82 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
85 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
86 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
87 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
88 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
89 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
92 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
116 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
117 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
118 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
119 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.99
Metatranscriptomes 3.01
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.41
Rhizosphere 96.39
Stem 0
Stem Tuber 0
Unclassified 3.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0121812 3300045051 Bacteria 2716
2 Ga0070690_100028646 3300005330 Bacteria 3451
3 Ga0068868_100021898 3300005338 Unclassified 4819
4 Ga0070691_10086194 3300005341 Bacteria 1543
5 Ga0070687_100026047 3300005343 Bacteria 2812
6 Ga0070679_100050935 3300005530 Bacteria 4124
7 Ga0070686_100001378 3300005544 Bacteria 13723
8 Ga0070704_100228764 3300005549 Bacteria 1516
9 Ga0068855_100005934 3300005563 Bacteria 14893
10 Ga0068855_100241969 3300005563 Bacteria 2016
11 Ga0068857_100118743 3300005577 Bacteria 2380
12 Ga0068859_100248876 3300005617 Bacteria 1867
13 Ga0068859_100315106 3300005617 Bacteria 1658
14 Ga0068864_100090380 3300005618 Bacteria 2699
15 Ga0068866_10026908 3300005718 Unclassified 2722
16 Ga0068863_100021403 3300005841 Bacteria 6172
17 Ga0068860_100372156 3300005843 Bacteria 1409
18 Ga0081538_10016668 3300005981 Bacteria 5619
19 Ga0097621_100004383 3300006237 Bacteria 9821
20 Ga0097621_100006790 3300006237 Bacteria 8132
21 Ga0068871_100005529 3300006358 Bacteria 8863
22 Ga0075433_10188768 3300006852 Bacteria 1833
23 Ga0075429_100074835 3300006880 Bacteria 2950
24 Ga0097620_100315081 3300006931 Bacteria 1658
25 Ga0105240_10005994 3300009093 Bacteria 17972
26 Ga0111539_10259616 3300009094 Bacteria 2023
27 Ga0105245_10002405 3300009098 Bacteria 16925
28 Ga0105248_10027384 3300009177 Bacteria 6345
29 Ga0105249_10530488 3300009553 Bacteria 1226
30 Ga0105239_10113672 3300010375 Bacteria 3002
31 Ga0157370_10032199 3300013104 Bacteria 5121
32 Ga0157370_10141044 3300013104 Bacteria 2245
33 Ga0157378_10001741 3300013297 Bacteria 19520
34 Ga0157378_10309795 3300013297 Bacteria 1531
35 Ga0157375_10190871 3300013308 Bacteria 2203
36 Ga0163163_10040523 3300014325 Bacteria 4548
37 Ga0157379_10000431 3300014968 Bacteria 33898
38 Ga0207695_10004936 3300025913 Bacteria 17974
39 Ga0207695_10186669 3300025913 Bacteria 1992
40 Ga0207663_10017393 3300025916 Bacteria 4006
41 Ga0207662_10011275 3300025918 Bacteria 4949
42 Ga0207652_10064809 3300025921 Bacteria 3162
43 Ga0207646_10001257 3300025922 Bacteria 31753
44 Ga0207694_10025524 3300025924 Bacteria 4492
45 Ga0207687_10002743 3300025927 Bacteria 11936
46 Ga0207711_10174246 3300025941 Bacteria 1953
47 Ga0207667_10002832 3300025949 Bacteria 21530
48 Ga0207641_10035802 3300026088 Bacteria 4139
49 Ga0207641_10223650 3300026088 Bacteria 1747
50 Ga0207648_10272718 3300026089 Bacteria 1512
51 Ga0268264_10091121 3300028381 Bacteria 2629
52 Ga0265326_10022649 3300028558 Bacteria 1798
53 Ga0265338_10000105 3300028800 Bacteria 156108
54 Ga0265338_10000135 3300028800 Bacteria 135743
55 Ga0265338_10009705 3300028800 Bacteria 11417
56 Ga0265338_10015660 3300028800 Bacteria 8308
57 Ga0265338_10065272 3300028800 Bacteria 3159
58 Ga0265324_10000300 3300029957 Bacteria 36812
59 Ga0265327_10022897 3300031251 Bacteria 3716
60 Ga0265316_10069836 3300031344 Bacteria 2711
61 Ga0316575_10028175 3300031665 Bacteria 2189
62 Ga0265314_10018992 3300031711 Bacteria 5334
63 Ga0265342_10135987 3300031712 Bacteria 1374
64 Ga0316576_10014589 3300031727 Bacteria 5251
65 Ga0316576_10025832 3300031727 Bacteria 4115
66 Ga0316576_10073740 3300031727 Bacteria 2522
67 Ga0316576_10241828 3300031727 Bacteria 1356
68 Ga0316578_10041978 3300031728 Bacteria 2650
69 Ga0316578_10085038 3300031728 Bacteria 1885
70 Ga0316577_10050353 3300031733 Bacteria 2325
71 Ga0316593_10001187 3300032168 Bacteria 5570
72 Ga0316593_10002518 3300032168 Bacteria 4368
73 Ga0316593_10019962 3300032168 Bacteria 2077
74 Ga0316596_1003702 3300033541 Bacteria 3376
75 Ga0316596_1018799 3300033541 Bacteria 1749
76 Ga0316574_0030168 3300035398 Bacteria 3282
77 Ga0373924_0024510 3300035410 Bacteria 2378
78 Ga0373935_0015045 3300035692 Bacteria 4672
79 Ga0373935_0037028 3300035692 Bacteria 3052
80 Ga0316582_0032321 3300036647 Bacteria 3206
81 Ga0316582_0166404 3300036647 Bacteria 1495
82 Ga0316584_0014109 3300036712 Bacteria 5676
83 Ga0316584_0015480 3300036712 Bacteria 5456
84 Ga0316584_0174390 3300036712 Bacteria 1593
85 Ga0373925_0137164 3300037068 Bacteria 1912
86 Ga0373925_0310768 3300037068 Bacteria 1274
87 Ga0395898_0036046 3300037466 Bacteria 4915
88 Ga0436364_1466141 3300037853 Bacteria 3952
89 Ga0436363_1085242 3300039450 Bacteria 10254
90 Ga0451577_0002217 3300042876 Bacteria 23669
91 Ga0451577_0096146 3300042876 Bacteria 2644
92 Ga0466961_0001788 3300044693 Bacteria 13316
93 Ga0453684_0099101 3300044712 Bacteria 3571
94 Ga0451576_0032456 3300045051 Bacteria 5560
95 Ga0451576_0053765 3300045051 Bacteria 4217
96 Ga0451576_0087312 3300045051 Bacteria 3244
97 Ga0451576_0120506 3300045051 Bacteria 2731
98 Ga0451576_0128117 3300045051 Bacteria 2645
99 Ga0451576_0163106 3300045051 Bacteria 2326
100 Ga0451576_0427371 3300045051 Bacteria 1390
101 Ga0495592_0189342 3300046454 Bacteria 1395
102 Ga0495629_0000112 3300046459 Bacteria 72938
103 Ga0495641_0029900 3300046461 Bacteria 2619
104 Ga0495641_0033853 3300046461 Unclassified 2421
105 Ga0495651_0180885 3300046462 Bacteria 1492
106 Ga0495651_0313583 3300046462 Bacteria 1048
107 Ga0495653_0189806 3300046463 Bacteria 1403
108 Ga0495580_0000115 3300046472 Bacteria 54848
109 Ga0495580_0062931 3300046472 Bacteria 2603
110 Ga0495664_0069375 3300046477 Bacteria 2104
111 Ga0495594_0001088 3300046499 Bacteria 14182
112 Ga0495618_0058168 3300046514 Bacteria 2448
113 Ga0495628_0061042 3300046516 Bacteria 2957
114 Ga0495628_0185648 3300046516 Bacteria 1571
115 Ga0495630_0099011 3300046517 Bacteria 2206
116 Ga0495630_0250423 3300046517 Bacteria 1353
117 Ga0495666_0014279 3300046526 Bacteria 3957
118 Ga0495652_0096734 3300046529 Bacteria 2403
119 Ga0495652_0239870 3300046529 Bacteria 1350
120 Ga0495586_0002009 3300046535 Bacteria 11042
121 Ga0495667_0042209 3300046559 Bacteria 3024
122 Ga0495634_0088023 3300046642 Unclassified 2020
123 Ga0495634_0128942 3300046642 Bacteria 1614
124 Ga0495635_0000923 3300046663 Bacteria 19353
125 Ga0495657_0131293 3300046675 Bacteria 1569
126 Ga0495599_0071794 3300046678 Bacteria 2160
127 Ga0495647_0028216 3300046681 Bacteria 2068
128 Ga0495658_0000082 3300046683 Bacteria 47833
129 Ga0495658_0010615 3300046683 Bacteria 4610
130 Ga0495658_0021691 3300046683 Unclassified 3389
131 Ga0495613_0006975 3300046689 Bacteria 8421
132 Ga0495613_0311151 3300046689 Bacteria 1089
133 Ga0495581_0000192 3300047315 Bacteria 28415
134 Ga0495581_0023657 3300047315 Bacteria 3559
135 Ga0495674_0227012 3300047319 Bacteria 1542
136 Ga0495676_0075481 3300047321 Bacteria 2578
137 Ga0495680_0000382 3300047322 Bacteria 49578
138 Ga0495680_0342974 3300047322 Bacteria 1042
139 Ga0495684_0094733 3300047471 Bacteria 2260
140 Ga0495684_0107430 3300047471 Unclassified 2108
141 Ga0496107_0024525 3300048910 Bacteria 4267
142 Ga0496112_0136122 3300048915 Bacteria 2427
143 Ga0496115_0000848 3300048918 Bacteria 22216
144 Ga0496115_0039226 3300048918 Bacteria 3760
145 Ga0501033_0028990 3300049570 Bacteria 4159
146 Ga0501036_0097943 3300049572 Bacteria 2479
147 Ga0501039_0033929 3300049575 Bacteria 3938
148 Ga0501042_0009647 3300049578 Bacteria 6445
149 Ga0501048_0016573 3300049582 Bacteria 5434
150 Ga0501071_0100747 3300049587 Bacteria 2129
151 Ga0501072_0020346 3300049588 Bacteria 5141
152 Ga0501074_0127458 3300049590 Bacteria 1821
153 Ga0501075_0035213 3300049591 Bacteria 3732
154 Ga0501076_0073141 3300049592 Bacteria 2744
155 Ga0501077_0228957 3300049593 Bacteria 1181
156 Ga0501081_0042814 3300049743 Bacteria 3104
157 nmdc:mga09592_68855_c1 3300050508 Bacteria 3002
158 nmdc:mga0qj67_153214_c1 3300050509 Bacteria 1870
159 nmdc:mga0n895_9068_c1 3300050512 Bacteria 8677
160 nmdc:mga0a205_144435_c1 3300050515 Bacteria 2279
161 Ga0495601_0022923 3300053077 Bacteria 3836
162 Ga0495601_0025159 3300053077 Bacteria 3669
163 Ga0495601_0046657 3300053077 Bacteria 2727
164 Ga0495612_0032732 3300053078 Bacteria 2101
165 Ga0495595_0011926 3300053084 Bacteria 3643
166 Ga0501084_0061335 3300054114 Bacteria 3148
167 Ga0451576_0121812
168 Ga0070690_100028646
169 Ga0068868_100021898
170 Ga0070691_10086194
171 Ga0070687_100026047
172 Ga0070679_100050935
173 Ga0070686_100001378
174 Ga0070704_100228764
175 Ga0068855_100005934
176 Ga0068855_100241969
177 Ga0068857_100118743
178 Ga0068859_100248876
179 Ga0068859_100315106
180 Ga0068864_100090380
181 Ga0068866_10026908
182 Ga0068863_100021403
183 Ga0068860_100372156
184 Ga0081538_10016668
185 Ga0097621_100004383
186 Ga0097621_100006790
187 Ga0068871_100005529
188 Ga0075433_10188768
189 Ga0075429_100074835
190 Ga0097620_100315081
191 Ga0105240_10005994
192 Ga0111539_10259616
193 Ga0105245_10002405
194 Ga0105248_10027384
195 Ga0105249_10530488
196 Ga0105239_10113672
197 Ga0157370_10032199
198 Ga0157370_10141044
199 Ga0157378_10001741
200 Ga0157378_10309795
201 Ga0157375_10190871
202 Ga0163163_10040523
203 Ga0157379_10000431
204 Ga0207695_10004936
205 Ga0207695_10186669
206 Ga0207663_10017393
207 Ga0207662_10011275
208 Ga0207652_10064809
209 Ga0207646_10001257
210 Ga0207694_10025524
211 Ga0207687_10002743
212 Ga0207711_10174246
213 Ga0207667_10002832
214 Ga0207641_10035802
215 Ga0207641_10223650
216 Ga0207648_10272718
217 Ga0268264_10091121
218 Ga0265326_10022649
219 Ga0265338_10000105
220 Ga0265338_10000135
221 Ga0265338_10009705
222 Ga0265338_10015660
223 Ga0265338_10065272
224 Ga0265324_10000300
225 Ga0265327_10022897
226 Ga0265316_10069836
227 Ga0316575_10028175
228 Ga0265314_10018992
229 Ga0265342_10135987
230 Ga0316576_10014589
231 Ga0316576_10025832
232 Ga0316576_10073740
233 Ga0316576_10241828
234 Ga0316578_10041978
235 Ga0316578_10085038
236 Ga0316577_10050353
237 Ga0316593_10001187
238 Ga0316593_10002518
239 Ga0316593_10019962
240 Ga0316596_1003702
241 Ga0316596_1018799
242 Ga0316574_0030168
243 Ga0373924_0024510
244 Ga0373935_0015045
245 Ga0373935_0037028
246 Ga0316582_0032321
247 Ga0316582_0166404
248 Ga0316584_0014109
249 Ga0316584_0015480
250 Ga0316584_0174390
251 Ga0373925_0137164
252 Ga0373925_0310768
253 Ga0395898_0036046
254 Ga0436364_1466141
255 Ga0436363_1085242
256 Ga0451577_0002217
257 Ga0451577_0096146
258 Ga0466961_0001788
259 Ga0453684_0099101
260 Ga0451576_0032456
261 Ga0451576_0053765
262 Ga0451576_0087312
263 Ga0451576_0120506
264 Ga0451576_0128117
265 Ga0451576_0163106
266 Ga0451576_0427371
267 Ga0495592_0189342
268 Ga0495629_0000112
269 Ga0495641_0029900
270 Ga0495641_0033853
271 Ga0495651_0180885
272 Ga0495651_0313583
273 Ga0495653_0189806
274 Ga0495580_0000115
275 Ga0495580_0062931
276 Ga0495664_0069375
277 Ga0495594_0001088
278 Ga0495618_0058168
279 Ga0495628_0061042
280 Ga0495628_0185648
281 Ga0495630_0099011
282 Ga0495630_0250423
283 Ga0495666_0014279
284 Ga0495652_0096734
285 Ga0495652_0239870
286 Ga0495586_0002009
287 Ga0495667_0042209
288 Ga0495634_0088023
289 Ga0495634_0128942
290 Ga0495635_0000923
291 Ga0495657_0131293
292 Ga0495599_0071794
293 Ga0495647_0028216
294 Ga0495658_0000082
295 Ga0495658_0010615
296 Ga0495658_0021691
297 Ga0495613_0006975
298 Ga0495613_0311151
299 Ga0495581_0000192
300 Ga0495581_0023657
301 Ga0495674_0227012
302 Ga0495676_0075481
303 Ga0495680_0000382
304 Ga0495680_0342974
305 Ga0495684_0094733
306 Ga0495684_0107430
307 Ga0496107_0024525
308 Ga0496112_0136122
309 Ga0496115_0000848
310 Ga0496115_0039226
311 Ga0501033_0028990
312 Ga0501036_0097943
313 Ga0501039_0033929
314 Ga0501042_0009647
315 Ga0501048_0016573
316 Ga0501071_0100747
317 Ga0501072_0020346
318 Ga0501074_0127458
319 Ga0501075_0035213
320 Ga0501076_0073141
321 Ga0501077_0228957
322 Ga0501081_0042814
323 nmdc:mga09592_68855_c1
324 nmdc:mga0qj67_153214_c1
325 nmdc:mga0n895_9068_c1
326 nmdc:mga0a205_144435_c1
327 Ga0495601_0022923
328 Ga0495601_0025159
329 Ga0495601_0046657
330 Ga0495612_0032732
331 Ga0495595_0011926
332 Ga0501084_0061335

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00490

ALAD

Delta-aminolevulinic acid dehydratase

11

331

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pv8-assembly1.cif.gz_A crystal structure of a low activity f12l mutant of human porphobilinogen synthase 0.9114 31 328
5hms-assembly1.cif.gz_A x-ray structure of human recombinant 5-aminolaevulinic acid dehydratase (hralad). 0.9092 19 328
1ylv-assembly1.cif.gz_A schiff-base complex of yeast 5-aminolaevulinic acid dehydratase with laevulinic acid 0.9055 19 328
1e51-assembly1.cif.gz_A crystal structure of native human erythrocyte 5-aminolaevulinic acid dehydratase 0.904 19 325
1h7r-assembly1.cif.gz_A schiff-base complex of yeast 5-aminolaevulinic acid dehydratase with succinylacetone at 2.0 a resolution. 0.9036 19 328
ID Description Score Start End Superfamily
af_Q8IL68_79_438_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9221 13 327 3.20.20.70
5hnrA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9037 19 325 3.20.20.70
af_Q8IL68_79_438_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8844 13 327 3.20.20.70
af_Q60178_5_334_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8832 7 324 3.20.20.70
1aw5A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8785 19 326 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A540V6Z4-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.966 72 271 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-T0Z991-F1-model_v4 porphobilinogen synthase (EC 4.2.1.24) (Porphobilinogen synthase) 0.9644 63 194 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A2V5LWX7-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9643 66 326 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A7R9R5Y2-F1-model_v4 deleted 0.9636 100 272
AF-A0A4Q2Z5X4-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.963 49 325 GO:0004655
GO:0005829
GO:0006782
GO:0008270

Map