F248572

General Info

Members Datasets Scaffolds Average Seq Length
166 82 165 830

Family's Representative Sequence

Representative Sequence 3300026067|Ga0207678_10066501|Ga0207678_100665011
Length 973
Sequence MNDSLKTSIFEHEKVGFDADSIKHSLSNSLTYSVGKDTITATDRDLFFAAAYLVRNRLIDRWMETMRSYYINDVKRVYYFSLEFLMGRTLMNSVHNLAFDQQFREAFKESAISLDDVREIEPDAALGNGGLGRLAACFLDSMATLDLPGYGYGIRYEYGMFAQRIEDGRQVEHPDNWLRYGNPWEFPRAEVLHQVKFHGRVVQYADEQGTFRYHWIDTDDVMAMAFDTPIPGYGTHTVNNMRLWSAKATRDFELRYFNEGNYVKAVEDKNDSENLSKVLYPDDSTAMGRELRLKQQYFFVCASLHDILRRYRKYQDNFDALPDKVAIQLNDTHPAIAIPELMRLLVDLHHLEWEKAWDITTRTFAYTNHTLMPEALETWAVALFENVLPRHLQIIYEINRRLLKDVMHRYPGDTGILRRMSIIDEEGGRRIRMAHLAIVGSHKVNGVAQIHTELMKQTIFADFDRFFPGKIINITNGITQRRWLNQANRRLAELITSRIGSGWIKDLIQLKRLVPLVDDASFRKEFAAAKRADKERLAAMLKQKLKIDISPDSLFDVQIKRIHEYKRQLLNVLHVVTLYNRIRHHPTADYVQRTVIFGGKAAPGYFMAKLIIKLINDIADVVNNDPLVAGHLKVVFIPNYDVSTAEEMIPAADLSEQISTAGTEASGTGNMRLALNGALTIGTLDGANIEIGNEVGEDNIFIFGLTTEEIAEMKANGYQPLDFYHSNAELRTVLDMIGSGFFSPDEPDRFKPVIDTLLQHGDKYFLLADYASYIACQKKVEAAYQDANVGAVDIAPAFARDGRSVQCRWRVRPPIHDTHPFDAFDDRLGLPAAALAVQLGLAARSAGLHVKPIRDDGVGDGLADAVRWHATARRPCGYGIGGVANLDAVRMTGQRLAQCSRLRADHAALRATEYRCFDSRVRARRETGHLELLSQHVQRGRSGVLDACGVGGTIERGALPAIERQRRGHDQHA

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
21 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
22 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
23 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
24 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
33 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
34 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
35 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
36 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
37 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
41 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
42 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
46 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
47 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
48 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
52 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
53 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
54 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
55 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
56 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
57 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
58 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
59 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
60 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
61 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
62 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
82 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0.6
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.6
Nodule 0
Rhizoplane 0
Rhizosphere 78.31
Stem 0
Stem Tuber 0
Unclassified 21.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100030327 3300005340 Bacteria 4104
2 Ga0070675_100057592 3300005354 Bacteria 3204
3 Ga0070709_10006112 3300005434 Bacteria 6550
4 Ga0070714_100003797 3300005435 Bacteria 11341
5 Ga0070708_100005284 3300005445 Bacteria 10228
6 Ga0070663_100007829 3300005455 Bacteria 6533
7 Ga0070706_100029586 3300005467 Bacteria 5046
8 Ga0070707_100023465 3300005468 Bacteria 5836
9 Ga0070698_100041462 3300005471 Bacteria 4725
10 Ga0070699_100001972 3300005518 Bacteria 18532
11 Ga0068853_100007471 3300005539 Bacteria 8749
12 Ga0068856_100056059 3300005614 Bacteria 3889
13 Ga0068863_100058332 3300005841 Bacteria 3653
14 Ga0070717_10010186 3300006028 Bacteria 7079
15 Ga0075367_10013255 3300006178 Bacteria 4426
16 Ga0105240_10032277 3300009093 Bacteria 6782
17 Ga0114129_10018033 3300009147 Bacteria 10053
18 Ga0105248_10070962 3300009177 Bacteria 3911
19 Ga0105237_10016659 3300009545 Bacteria 7634
20 Ga0157370_10027405 3300013104 Bacteria 5618
21 Ga0157374_10000525 3300013296 Bacteria 34434
22 Ga0157378_10082261 3300013297 Bacteria 2911
23 Ga0182008_10013628 3300014497 Bacteria 4272
24 Ga0207684_10008196 3300025910 Bacteria 9309
25 Ga0207695_10030757 3300025913 Bacteria 5907
26 Ga0207646_10085242 3300025922 Bacteria 2826
27 Ga0207669_10045221 3300025937 Bacteria 2593
28 Ga0207678_10001973 3300026067 Bacteria 18693
29 Ga0207678_10066501 3300026067 Bacteria 3095
30 Ga0265334_10001140 3300028573 Bacteria 12992
31 Ga0265336_10000772 3300028666 Bacteria 16950
32 Ga0265338_10005861 3300028800 Bacteria 15859
33 Ga0265338_10016031 3300028800 Bacteria 8185
34 Ga0265324_10000114 3300029957 Bacteria 63553
35 Ga0265330_10004421 3300031235 Bacteria 7135
36 Ga0265320_10000282 3300031240 Bacteria 41238
37 Ga0265325_10000651 3300031241 Bacteria 25251
38 Ga0265339_10002857 3300031249 Bacteria 12256
39 Ga0265331_10000187 3300031250 Bacteria 75938
40 Ga0265331_10000270 3300031250 Bacteria 57610
41 Ga0265331_10004790 3300031250 Bacteria 8327
42 Ga0265331_10025035 3300031250 Bacteria 3014
43 Ga0265327_10000116 3300031251 Bacteria 173745
44 Ga0265327_10000437 3300031251 Bacteria 75716
45 Ga0265327_10000472 3300031251 Bacteria 71196
46 Ga0265327_10001014 3300031251 Bacteria 39680
47 Ga0265327_10001724 3300031251 Bacteria 25924
48 Ga0265316_10000213 3300031344 Bacteria 67886
49 Ga0265316_10000263 3300031344 Bacteria 60136
50 Ga0265316_10023758 3300031344 Bacteria 5147
51 Ga0265316_10026082 3300031344 Bacteria 4869
52 Ga0265313_10002237 3300031595 Bacteria 17028
53 Ga0316579_10000006 3300031691 Bacteria 56681
54 Ga0316579_10000734 3300031691 Bacteria 11239
55 Ga0265314_10001294 3300031711 Bacteria 28367
56 Ga0265314_10002450 3300031711 Bacteria 18984
57 Ga0265314_10002915 3300031711 Bacteria 16973
58 Ga0316576_10006994 3300031727 Bacteria 7060
59 Ga0316576_10026217 3300031727 Bacteria 4088
60 Ga0316578_10026043 3300031728 Bacteria 3295
61 Ga0316577_10008477 3300031733 Bacteria 5513
62 Ga0316583_10000144 3300032133 Bacteria 17007
63 Ga0316580_10002562 3300032139 Bacteria 5027
64 Ga0316596_1003038 3300033541 Bacteria 3647
65 Ga0373928_0000074 3300035084 Bacteria 17490
66 Ga0316574_0004926 3300035398 Bacteria 7072
67 Ga0316574_0046655 3300035398 Bacteria 2687
68 Ga0373935_0006198 3300035692 Bacteria 7118
69 Ga0316582_0000555 3300036647 Bacteria 14305
70 Ga0316582_0001635 3300036647 Bacteria 10008
71 Ga0316584_0001048 3300036712 Bacteria 16074
72 Ga0316584_0003259 3300036712 Bacteria 10501
73 Ga0316584_0005345 3300036712 Bacteria 8609
74 Ga0400484_25997 3300038725 Bacteria 2848
75 Ga0400484_30280 3300038725 Bacteria 4624
76 Ga0400490_06774 3300038726 Bacteria 50396
77 Ga0400490_12900 3300038726 Bacteria 3062
78 Ga0400490_46623 3300038726 Bacteria 40858
79 Ga0400490_52136 3300038726 Bacteria 70831
80 Ga0400491_13655 3300038727 Bacteria 10114
81 Ga0400491_16866 3300038727 Bacteria 3992
82 Ga0400485_04466 3300038735 Bacteria 8061
83 Ga0400485_17163 3300038735 Bacteria 43508
84 Ga0400485_19057 3300038735 Bacteria 21356
85 Ga0400488_11762 3300038741 Bacteria 4732
86 Ga0400488_19456 3300038741 Bacteria 13756
87 Ga0400488_32460 3300038741 Bacteria 2789
88 Ga0400488_32560 3300038741 Bacteria 18325
89 Ga0400488_60533 3300038741 Bacteria 10179
90 Ga0400488_62177 3300038741 Bacteria 9800
91 Ga0400486_01662 3300038742 Bacteria 43450
92 Ga0400486_28583 3300038742 Bacteria 22203
93 Ga0400486_29285 3300038742 Bacteria 8084
94 Ga0400483_070617 3300039062 Bacteria 4677
95 Ga0400483_082668 3300039062 Bacteria 9679
96 Ga0400483_088430 3300039062 Bacteria 6896
97 Ga0400483_134377 3300039062 Bacteria 14423
98 Ga0400483_232969 3300039062 Bacteria 14085
99 Ga0400483_239509 3300039062 Bacteria 13427
100 Ga0400483_287904 3300039062 Bacteria 22043
101 Ga0400487_03534 3300039110 Bacteria 3523
102 Ga0400487_04115 3300039110 Bacteria 4338
103 Ga0400487_11740 3300039110 Bacteria 6144
104 Ga0400487_13124 3300039110 Bacteria 55255
105 Ga0400487_17601 3300039110 Bacteria 48398
106 Ga0400487_27950 3300039110 Bacteria 76746
107 Ga0400487_31869 3300039110 Bacteria 11319
108 Ga0400487_40651 3300039110 Bacteria 12023
109 Ga0436360_0763885 3300039438 Bacteria 7234
110 Ga0451577_0000080 3300042876 Bacteria 218034
111 Ga0451577_0003094 3300042876 Bacteria 18784
112 Ga0451577_0003859 3300042876 Bacteria 16275
113 Ga0453683_0000049 3300044673 Bacteria 206697
114 Ga0453683_0000269 3300044673 Bacteria 68263
115 Ga0453683_0009310 3300044673 Bacteria 6565
116 Ga0453684_0000237 3300044712 Bacteria 236999
117 Ga0453684_0000286 3300044712 Bacteria 218034
118 Ga0453684_0000300 3300044712 Bacteria 208527
119 Ga0453684_0000633 3300044712 Bacteria 127483
120 Ga0453684_0000831 3300044712 Bacteria 104267
121 Ga0453684_0000952 3300044712 Bacteria 95375
122 Ga0453684_0001689 3300044712 Bacteria 59652
123 Ga0453684_0003750 3300044712 Bacteria 33597
124 Ga0453684_0013754 3300044712 Bacteria 13086
125 Ga0453684_0015411 3300044712 Bacteria 12098
126 Ga0453684_0017060 3300044712 Bacteria 11273
127 Ga0453684_0017664 3300044712 Bacteria 11026
128 Ga0453684_0022404 3300044712 Bacteria 9372
129 Ga0453684_0026094 3300044712 Bacteria 8456
130 Ga0453684_0032892 3300044712 Bacteria 7242
131 Ga0453684_0059878 3300044712 Bacteria 4904
132 Ga0451576_0000013 3300045051 Bacteria 665120
133 Ga0451576_0000102 3300045051 Bacteria 218034
134 Ga0451576_0000219 3300045051 Bacteria 141949
135 Ga0451576_0000381 3300045051 Bacteria 104080
136 Ga0451576_0000390 3300045051 Bacteria 102401
137 Ga0451576_0000906 3300045051 Bacteria 56126
138 Ga0451576_0001455 3300045051 Bacteria 40266
139 Ga0451576_0002005 3300045051 Bacteria 32259
140 Ga0451576_0002763 3300045051 Bacteria 25371
141 Ga0501032_0000221 3300049569 Bacteria 47402
142 Ga0501032_0003460 3300049569 Bacteria 12095
143 Ga0501033_0000800 3300049570 Bacteria 28870
144 Ga0501033_0001961 3300049570 Bacteria 17912
145 Ga0501033_0007268 3300049570 Bacteria 8636
146 Ga0501036_0001708 3300049572 Bacteria 17060
147 Ga0501036_0005582 3300049572 Bacteria 10202
148 Ga0501038_0008196 3300049574 Bacteria 9609
149 Ga0501038_0008405 3300049574 Bacteria 9494
150 Ga0501038_0023180 3300049574 Bacteria 5553
151 Ga0501039_0001125 3300049575 Bacteria 19670
152 Ga0501040_0000603 3300049576 Bacteria 21937
153 Ga0501042_0001024 3300049578 Bacteria 15906
154 Ga0501043_0000590 3300049579 Bacteria 32162
155 Ga0501043_0012841 3300049579 Bacteria 6546
156 Ga0501046_0020650 3300049580 Bacteria 5444
157 Ga0501047_0010104 3300049581 Bacteria 8920
158 Ga0501048_0001052 3300049582 Bacteria 20670
159 Ga0501068_0008273 3300049584 Bacteria 5782
160 Ga0501035_0003202 3300049822 Bacteria 15682
161 Ga0501044_0000326 3300049823 Bacteria 60246
162 Ga0501044_0001129 3300049823 Bacteria 31721
163 Ga0501044_0062349 3300049823 Bacteria 3811
164 Ga0501045_0000931 3300049824 Bacteria 19126
165 nmdc:mga0a205_22368_c1 3300050515 Bacteria 5987

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038741 Ga0400488_62177 Ga0400488_62177_7554_9785 742
2 3300039110 Ga0400487_04115 Ga0400487_04115_16_2247 742
3 3300038741 Ga0400488_32460 Ga0400488_32460_42_2375 776
4 3300049582 Ga0501048_0001052 Ga0501048_0001052_9863_12250 793
5 3300032139 Ga0316580_10002562 Ga0316580_100025622 807
6 3300035398 Ga0316574_0046655 Ga0316574_0046655_40_2472 807
7 3300045051 Ga0451576_0000381 Ga0451576_0000381_73686_76118 808
8 3300031727 Ga0316576_10006994 Ga0316576_100069943 809
9 3300031727 Ga0316576_10026217 Ga0316576_100262173 809
10 3300035398 Ga0316574_0004926 Ga0316574_0004926_1748_4186 809
11 3300005354 Ga0070675_100057592 Ga0070675_1000575922 816
12 3300013297 Ga0157378_10082261 Ga0157378_100822612 816
13 3300014497 Ga0182008_10013628 Ga0182008_100136281 816
14 3300025937 Ga0207669_10045221 Ga0207669_100452211 816
15 3300028800 Ga0265338_10005861 Ga0265338_100058617 816
16 3300031240 Ga0265320_10000282 Ga0265320_1000028226 816
17 3300031249 Ga0265339_10002857 Ga0265339_100028575 816
18 3300031250 Ga0265331_10000187 Ga0265331_1000018757 816
19 3300031250 Ga0265331_10000270 Ga0265331_1000027047 816
20 3300031595 Ga0265313_10002237 Ga0265313_100022377 816
21 3300031711 Ga0265314_10002915 Ga0265314_1000291513 816
22 3300044673 Ga0453683_0009310 Ga0453683_0009310_1798_4272 816
23 3300005455 Ga0070663_100007829 Ga0070663_1000078295 817
24 3300026067 Ga0207678_10001973 Ga0207678_1000197314 817
25 3300039062 Ga0400483_134377 Ga0400483_134377_6721_9231 817
26 3300039062 Ga0400483_239509 Ga0400483_239509_4432_6942 817
27 3300045051 Ga0451576_0000219 Ga0451576_0000219_61911_64385 817
28 3300026067 Ga0207678_10066501 Ga0207678_100665011 818
29 3300031235 Ga0265330_10004421 Ga0265330_100044216 818
30 3300038735 Ga0400485_19057 Ga0400485_19057_6738_9197 818
31 3300038742 Ga0400486_28583 Ga0400486_28583_12938_15397 818
32 3300005539 Ga0068853_100007471 Ga0068853_1000074716 819
33 3300009093 Ga0105240_10032277 Ga0105240_100322772 819
34 3300009545 Ga0105237_10016659 Ga0105237_100166594 819
35 3300013296 Ga0157374_10000525 Ga0157374_1000052520 819
36 3300025913 Ga0207695_10030757 Ga0207695_100307573 819
37 3300031250 Ga0265331_10004790 Ga0265331_100047902 819
38 3300031344 Ga0265316_10023758 Ga0265316_100237582 819
39 3300031711 Ga0265314_10002450 Ga0265314_100024503 819
40 3300031250 Ga0265331_10025035 Ga0265331_100250352 821
41 3300032133 Ga0316583_10000144 Ga0316583_100001446 821
42 3300038726 Ga0400490_52136 Ga0400490_52136_36652_39120 821
43 3300038741 Ga0400488_19456 Ga0400488_19456_7207_9675 821
44 3300039062 Ga0400483_070617 Ga0400483_070617_306_2774 821
45 3300039062 Ga0400483_082668 Ga0400483_082668_2163_4631 821
46 3300039062 Ga0400483_232969 Ga0400483_232969_4399_6867 821
47 3300039062 Ga0400483_287904 Ga0400483_287904_13663_16131 821
48 3300045051 Ga0451576_0000390 Ga0451576_0000390_27097_29577 821
49 3300009177 Ga0105248_10070962 Ga0105248_100709623 822
50 3300031691 Ga0316579_10000734 Ga0316579_100007345 822
51 3300031733 Ga0316577_10008477 Ga0316577_100084772 822
52 3300033541 Ga0316596_1003038 Ga0316596_10030382 822
53 3300036647 Ga0316582_0001635 Ga0316582_0001635_3700_6174 822
54 3300036712 Ga0316584_0001048 Ga0316584_0001048_6143_8617 822
55 3300038726 Ga0400490_46623 Ga0400490_46623_19733_22204 822
56 3300038735 Ga0400485_17163 Ga0400485_17163_5722_8193 822
57 3300038741 Ga0400488_60533 Ga0400488_60533_1782_4253 822
58 3300038742 Ga0400486_01662 Ga0400486_01662_5642_8113 822
59 3300039110 Ga0400487_03534 Ga0400487_03534_902_3373 822
60 3300039110 Ga0400487_13124 Ga0400487_13124_37974_40445 822
61 3300039110 Ga0400487_17601 Ga0400487_17601_35424_37895 822
62 3300039110 Ga0400487_27950 Ga0400487_27950_31765_34239 822
63 3300044712 Ga0453684_0003750 Ga0453684_0003750_17459_19945 822
64 3300038725 Ga0400484_25997 Ga0400484_25997_205_2682 823
65 3300038725 Ga0400484_30280 Ga0400484_30280_164_2641 823
66 3300038726 Ga0400490_06774 Ga0400490_06774_433_2907 823
67 3300038727 Ga0400491_13655 Ga0400491_13655_7551_10028 823
68 3300038727 Ga0400491_16866 Ga0400491_16866_222_2696 823
69 3300038741 Ga0400488_11762 Ga0400488_11762_2124_4598 823
70 3300039062 Ga0400483_088430 Ga0400483_088430_3082_5556 823
71 3300042876 Ga0451577_0003094 Ga0451577_0003094_11384_13861 823
72 3300045051 Ga0451576_0000906 Ga0451576_0000906_52174_54651 823
73 3300045051 Ga0451576_0002763 Ga0451576_0002763_21441_23918 823
74 3300028573 Ga0265334_10001140 Ga0265334_1000114011 824
75 3300028800 Ga0265338_10016031 Ga0265338_100160314 824
76 3300031251 Ga0265327_10000472 Ga0265327_1000047230 824
77 3300036712 Ga0316584_0003259 Ga0316584_0003259_508_3039 824
78 3300038741 Ga0400488_32560 Ga0400488_32560_311_2791 824
79 3300039110 Ga0400487_11740 Ga0400487_11740_3365_5956 824
80 3300042876 Ga0451577_0003859 Ga0451577_0003859_12180_14672 824
81 3300044712 Ga0453684_0000633 Ga0453684_0000633_50236_52728 824
82 3300042876 Ga0451577_0000080 Ga0451577_0000080_46516_48999 825
83 3300044673 Ga0453683_0000049 Ga0453683_0000049_46516_48999 825
84 3300044712 Ga0453684_0000286 Ga0453684_0000286_169036_171519 825
85 3300045051 Ga0451576_0000013 Ga0451576_0000013_20324_22807 825
86 3300045051 Ga0451576_0000102 Ga0451576_0000102_46516_48999 825
87 3300049569 Ga0501032_0003460 Ga0501032_0003460_2815_5298 825
88 3300049570 Ga0501033_0000800 Ga0501033_0000800_17229_19712 825
89 3300049570 Ga0501033_0007268 Ga0501033_0007268_4290_6773 825
90 3300049572 Ga0501036_0005582 Ga0501036_0005582_3886_6369 825
91 3300049574 Ga0501038_0008196 Ga0501038_0008196_682_3165 825
92 3300049574 Ga0501038_0008405 Ga0501038_0008405_3395_5878 825
93 3300049579 Ga0501043_0012841 Ga0501043_0012841_51_2534 825
94 3300049822 Ga0501035_0003202 Ga0501035_0003202_8462_10945 825
95 3300049823 Ga0501044_0000326 Ga0501044_0000326_20697_23180 825
96 3300049823 Ga0501044_0062349 Ga0501044_0062349_1061_3544 825
97 3300005434 Ga0070709_10006112 Ga0070709_100061125 826
98 3300005445 Ga0070708_100005284 Ga0070708_1000052844 826
99 3300005467 Ga0070706_100029586 Ga0070706_1000295862 826
100 3300005468 Ga0070707_100023465 Ga0070707_1000234653 826
101 3300005471 Ga0070698_100041462 Ga0070698_1000414622 826
102 3300005518 Ga0070699_100001972 Ga0070699_1000019728 826
103 3300006028 Ga0070717_10010186 Ga0070717_100101863 826
104 3300025910 Ga0207684_10008196 Ga0207684_100081963 826
105 3300025922 Ga0207646_10085242 Ga0207646_100852421 826
106 3300031251 Ga0265327_10000116 Ga0265327_1000011681 826
107 3300038726 Ga0400490_12900 Ga0400490_12900_202_2700 826
108 3300039110 Ga0400487_31869 Ga0400487_31869_112_2676 826
109 3300044712 Ga0453684_0017060 Ga0453684_0017060_6012_8546 826
110 3300045051 Ga0451576_0001455 Ga0451576_0001455_37205_39739 826
111 3300005435 Ga0070714_100003797 Ga0070714_1000037972 827
112 3300013104 Ga0157370_10027405 Ga0157370_100274052 827
113 3300031251 Ga0265327_10000437 Ga0265327_1000043765 827
114 3300031251 Ga0265327_10001014 Ga0265327_1000101420 827
115 3300031344 Ga0265316_10000263 Ga0265316_1000026336 827
116 3300031711 Ga0265314_10001294 Ga0265314_100012948 827
117 3300044673 Ga0453683_0000269 Ga0453683_0000269_25324_27846 827
118 3300044712 Ga0453684_0022404 Ga0453684_0022404_2824_5352 827
119 3300044712 Ga0453684_0026094 Ga0453684_0026094_4819_7353 827
120 3300039438 Ga0436360_0763885 Ga0436360_0763885_3050_5542 828
121 3300050515 nmdc:mga0a205_22368_c1 nmdc:mga0a205_22368_c1_2404_4896 828
122 3300005614 Ga0068856_100056059 Ga0068856_1000560594 829
123 3300031691 Ga0316579_10000006 Ga0316579_1000000632 829
124 3300031728 Ga0316578_10026043 Ga0316578_100260432 829
125 3300036647 Ga0316582_0000555 Ga0316582_0000555_2585_5080 829
126 3300036712 Ga0316584_0005345 Ga0316584_0005345_2080_4575 829
127 3300038735 Ga0400485_04466 Ga0400485_04466_2994_5573 829
128 3300038742 Ga0400486_29285 Ga0400486_29285_2988_5567 829
129 3300039110 Ga0400487_40651 Ga0400487_40651_2794_5373 829
130 3300044712 Ga0453684_0017664 Ga0453684_0017664_5163_7664 829
131 3300044712 Ga0453684_0032892 Ga0453684_0032892_4258_6765 829
132 3300049569 Ga0501032_0000221 Ga0501032_0000221_32973_35492 829
133 3300049570 Ga0501033_0001961 Ga0501033_0001961_9226_11745 829
134 3300049572 Ga0501036_0001708 Ga0501036_0001708_3948_6467 829
135 3300049574 Ga0501038_0023180 Ga0501038_0023180_2074_4593 829
136 3300049575 Ga0501039_0001125 Ga0501039_0001125_9171_11690 829
137 3300049576 Ga0501040_0000603 Ga0501040_0000603_10371_12890 829
138 3300049578 Ga0501042_0001024 Ga0501042_0001024_8163_10682 829
139 3300049579 Ga0501043_0000590 Ga0501043_0000590_21222_23741 829
140 3300049580 Ga0501046_0020650 Ga0501046_0020650_852_3371 829
141 3300049581 Ga0501047_0010104 Ga0501047_0010104_2080_4599 829
142 3300049584 Ga0501068_0008273 Ga0501068_0008273_24_2543 829
143 3300049823 Ga0501044_0001129 Ga0501044_0001129_21222_23741 829
144 3300049824 Ga0501045_0000931 Ga0501045_0000931_11511_14030 829
145 3300009147 Ga0114129_10018033 Ga0114129_100180336 830
146 3300028666 Ga0265336_10000772 Ga0265336_1000077215 830
147 3300029957 Ga0265324_10000114 Ga0265324_1000011451 830
148 3300031241 Ga0265325_10000651 Ga0265325_1000065117 830
149 3300044712 Ga0453684_0000237 Ga0453684_0000237_70575_73073 830
150 3300044712 Ga0453684_0001689 Ga0453684_0001689_6427_8964 830
151 3300044712 Ga0453684_0013754 Ga0453684_0013754_4155_6692 830
152 3300044712 Ga0453684_0059878 Ga0453684_0059878_514_3042 830
153 3300006178 Ga0075367_10013255 Ga0075367_100132552 831
154 3300031251 Ga0265327_10000437 Ga0265327_1000043744 832
155 3300031251 Ga0265327_10001724 Ga0265327_100017248 832
156 3300031344 Ga0265316_10000213 Ga0265316_1000021311 832
157 3300031344 Ga0265316_10026082 Ga0265316_100260822 832
158 3300035084 Ga0373928_0000074 Ga0373928_0000074_9704_12238 836
159 3300035692 Ga0373935_0006198 Ga0373935_0006198_2270_4804 836
160 3300044712 Ga0453684_0000300 Ga0453684_0000300_137422_139962 836
161 3300044712 Ga0453684_0000831 Ga0453684_0000831_68628_71171 836
162 3300044712 Ga0453684_0000952 Ga0453684_0000952_29727_32267 836
163 3300044712 Ga0453684_0015411 Ga0453684_0015411_3456_5996 836
164 3300045051 Ga0451576_0002005 Ga0451576_0002005_848_3391 836
165 3300005340 Ga0070689_100030327 Ga0070689_1000303272 837
166 3300005841 Ga0068863_100058332 Ga0068863_1000583322 837

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00343

Phosphorylase

Carbohydrate phosphorylase

107

802

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1exv-assembly1.cif.gz_B human liver glycogen phosphorylase a complexed with glcnac and cp-403,700 0.9814 24 828
2zb2-assembly1.cif.gz_B human liver glycogen phosphorylase a complexed with glcose and 5-chloro-n-[4-(1,2-dihydroxyethyl)phenyl]-1h-indole-2-carboxamide 0.981 25 828
1l5q-assembly1.cif.gz_A human liver glycogen phosphorylase a complexed with caffeine, n-acetyl-beta-d-glucopyranosylamine, and cp-403700 0.9808 24 828
1fc0-assembly1.cif.gz_B human liver glycogen phosphorylase complexed with n-acetyl-beta-d-glucopyranosylamine 0.9807 24 828
2ati-assembly1.cif.gz_A glycogen phosphorylase inhibitors 0.9806 24 828
ID Description Score Start End Superfamily
1gpaA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9846 484 810 3.40.50.2000
1gpaA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9816 484 810 3.40.50.2000
1ahpA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9804 484 810 3.40.50.2000
af_Q9N5U1_147_865_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9775 114 825 3.40.50.2000
2qllA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9719 21 483 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A504YJM5-F1-model_v4 Alpha-1,4 glucan phosphorylase (EC 2.4.1.1) 0.9902 427 562 GO:0005737
GO:0005980
GO:0008184
GO:0030170
GO:0031220
AF-A0A5Q0BGU0-F1-model_v4 Alpha-1,4 glucan phosphorylase (EC 2.4.1.1) 0.989 19 831 GO:0000160
GO:0005737
GO:0005980
GO:0008184
GO:0030170
GO:0031220
AF-U3TY58-F1-model_v4 Alpha-1,4 glucan phosphorylase (EC 2.4.1.1) 0.9887 639 828 GO:0005737
GO:0005980
GO:0008184
GO:0030170
GO:0031220
AF-A0A4Q3Q3W3-F1-model_v4 deleted 0.9886 500 831
AF-I6SME4-F1-model_v4 Alpha-1,4 glucan phosphorylase (EC 2.4.1.1) 0.9885 336 562 GO:0005737
GO:0005980
GO:0008184
GO:0030170
GO:0031220

Feature Viewer

pLDDT pTM Quality
90.89 0.91 High
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Predicted Structure (AlphaFold2)

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