F247712

General Info

Members Datasets Scaffolds Average Seq Length
166 102 332 240

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100025265|Ga0070689_1000252652
Length 243
Sequence MNEFCLFAVVGTASNKAELIYIWDQATPEGKAVIVILLLFSILAWSVMTSKAVQMRRAKKLNQFFTAEFKTQKTVLDMFDRRIQAEGCPLFMVYQAGSLELDARLKTSDGGRKRFVSLKGMEHVKRLMENAVAQESLKLESGLILLAIAVSGAPFLGLLGTVWGVMSTFGHIAQQGSATMAAMAPGVSAALITTVAGLLVAIPSMFGYNWLVHSLRVLTVQLDNFAQELVSKMETEYLKDDVE

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
55 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
62 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
66 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
70 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
73 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
80 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
85 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
86 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
101 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
102 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.6
Nodule 0
Rhizoplane 1.81
Rhizosphere 97.59
Stem 0
Stem Tuber 0
Unclassified 21.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100025265 3300005340 Bacteria 4462
2 Ga0065707_10128796 3300005295 Bacteria 1959
3 Ga0070658_10058317 3300005327 Unclassified 3142
4 Ga0068869_100266661 3300005334 Unclassified 1373
5 Ga0070680_100312441 3300005336 Bacteria 1334
6 Ga0068868_100268088 3300005338 Bacteria 1442
7 Ga0070689_100001567 3300005340 Bacteria 14577
8 Ga0070689_100006700 3300005340 Bacteria 8006
9 Ga0070689_100102589 3300005340 Bacteria 2266
10 Ga0070689_100150053 3300005340 Bacteria 1879
11 Ga0070689_100525719 3300005340 Archaea 1016
12 Ga0070691_10101127 3300005341 Bacteria 1432
13 Ga0070675_100160794 3300005354 Bacteria 1931
14 Ga0070688_100094660 3300005365 Bacteria 1959
15 Ga0070714_100004453 3300005435 Bacteria 10551
16 Ga0070711_100000512 3300005439 Bacteria 20157
17 Ga0070711_100393743 3300005439 Bacteria 1123
18 Ga0070681_10043018 3300005458 Unclassified 4526
19 Ga0070681_10160862 3300005458 Unclassified 2169
20 Ga0070685_10009382 3300005466 Bacteria 5054
21 Ga0070706_100687877 3300005467 Bacteria 949
22 Ga0070686_100004425 3300005544 Bacteria 7749
23 Ga0070686_100232526 3300005544 Bacteria 1338
24 Ga0070704_100514246 3300005549 Unclassified 1041
25 Ga0068855_100031105 3300005563 Bacteria 6376
26 Ga0068855_100204504 3300005563 Bacteria 2222
27 Ga0068855_100333014 3300005563 Bacteria 1675
28 Ga0068857_100000452 3300005577 Bacteria 29274
29 Ga0068859_100116331 3300005617 Bacteria 2738
30 Ga0068859_101108537 3300005617 Bacteria 871
31 Ga0068864_100069755 3300005618 Bacteria 3057
32 Ga0068863_100012897 3300005841 Bacteria 8059
33 Ga0075433_10627477 3300006852 Unclassified 943
34 Ga0075436_100050151 3300006914 Bacteria 2880
35 Ga0097620_100116325 3300006931 Bacteria 2738
36 Ga0097620_101108666 3300006931 Bacteria 871
37 Ga0105240_10032062 3300009093 Bacteria 6805
38 Ga0105240_10057172 3300009093 Bacteria 4876
39 Ga0105240_10260702 3300009093 Bacteria 2000
40 Ga0111539_10308674 3300009094 Bacteria 1841
41 Ga0111539_10444094 3300009094 Bacteria 1510
42 Ga0105243_10592923 3300009148 Unclassified 1066
43 Ga0105242_10185945 3300009176 Bacteria 1836
44 Ga0105248_10063811 3300009177 Bacteria 4134
45 Ga0105248_10108442 3300009177 Unclassified 3131
46 Ga0105248_10851026 3300009177 Unclassified 1029
47 Ga0157370_10033943 3300013104 Unclassified 4971
48 Ga0157370_10092843 3300013104 Bacteria 2832
49 Ga0157369_10919507 3300013105 Unclassified 897
50 Ga0157374_10869773 3300013296 Bacteria 918
51 Ga0157378_10082954 3300013297 Bacteria 2899
52 Ga0157378_10243732 3300013297 Bacteria 1718
53 Ga0163163_10312935 3300014325 Bacteria 1623
54 Ga0157380_10346643 3300014326 Bacteria 1388
55 Ga0157376_10104413 3300014969 Bacteria 2483
56 Ga0157376_10565769 3300014969 Unclassified 1127
57 Ga0163161_10872862 3300017792 Unclassified 760
58 Ga0207643_10066194 3300025908 Bacteria 2072
59 Ga0207705_10553416 3300025909 Unclassified 894
60 Ga0207707_10034114 3300025912 Unclassified 4453
61 Ga0207707_10216345 3300025912 Unclassified 1668
62 Ga0207695_10036982 3300025913 Bacteria 5270
63 Ga0207695_10053718 3300025913 Bacteria 4211
64 Ga0207695_10289301 3300025913 Bacteria 1531
65 Ga0207695_10360409 3300025913 Bacteria 1340
66 Ga0207652_10049578 3300025921 Bacteria 3595
67 Ga0207664_10006983 3300025929 Bacteria 7812
68 Ga0207686_10202165 3300025934 Bacteria 1423
69 Ga0207670_10001402 3300025936 Bacteria 12688
70 Ga0207670_10016314 3300025936 Bacteria 4461
71 Ga0207670_10139163 3300025936 Bacteria 1788
72 Ga0207711_10170113 3300025941 Unclassified 1977
73 Ga0207711_10288034 3300025941 Unclassified 1513
74 Ga0207667_10145318 3300025949 Bacteria 2441
75 Ga0207667_10162847 3300025949 Bacteria 2294
76 Ga0207667_10709620 3300025949 Bacteria 1008
77 Ga0207677_10264833 3300026023 Bacteria 1403
78 Ga0207708_10061073 3300026075 Bacteria 2877
79 Ga0207702_10483625 3300026078 Bacteria 1205
80 Ga0207676_10077854 3300026095 Bacteria 2684
81 Ga0207674_10727892 3300026116 Unclassified 958
82 Ga0207698_10552619 3300026142 Bacteria 1129
83 Ga0265337_1000362 3300028556 Bacteria 24298
84 Ga0265337_1024948 3300028556 Bacteria 1823
85 Ga0265326_10005033 3300028558 Bacteria 4185
86 Ga0265323_10000183 3300028653 Bacteria 37704
87 Ga0265336_10001412 3300028666 Bacteria 11084
88 Ga0265338_10000138 3300028800 Bacteria 135457
89 Ga0265338_10000184 3300028800 Bacteria 116834
90 Ga0265338_10001365 3300028800 Bacteria 39706
91 Ga0265338_10001550 3300028800 Bacteria 37131
92 Ga0265338_10001968 3300028800 Bacteria 31992
93 Ga0265338_10002298 3300028800 Bacteria 29060
94 Ga0265338_10006014 3300028800 Bacteria 15591
95 Ga0265338_10010037 3300028800 Bacteria 11190
96 Ga0265338_10230655 3300028800 Bacteria 1377
97 Ga0265324_10063794 3300029957 Bacteria 1258
98 Ga0265332_10011783 3300031238 Bacteria 3884
99 Ga0265328_10059606 3300031239 Bacteria 1401
100 Ga0265320_10000296 3300031240 Bacteria 40524
101 Ga0265320_10009619 3300031240 Bacteria 5816
102 Ga0265320_10141245 3300031240 Bacteria 1091
103 Ga0265329_10001712 3300031242 Bacteria 10494
104 Ga0265329_10074763 3300031242 Bacteria 1072
105 Ga0265340_10012055 3300031247 Bacteria 4572
106 Ga0265327_10084644 3300031251 Bacteria 1558
107 Ga0265316_10026594 3300031344 Bacteria 4809
108 Ga0265316_10027138 3300031344 Bacteria 4748
109 Ga0265316_10261651 3300031344 Bacteria 1268
110 Ga0265314_10000020 3300031711 Bacteria 307052
111 Ga0307409_100350413 3300031995 Unclassified 1393
112 Ga0316583_10071480 3300032133 Unclassified 1214
113 Ga0373954_0031181 3300035118 Unclassified 2460
114 Ga0373954_0145023 3300035118 Bacteria 1159
115 Ga0373956_0004021 3300035119 Bacteria 5907
116 Ga0373956_0234097 3300035119 Bacteria 873
117 Ga0373955_0294903 3300035172 Bacteria 977
118 Ga0316574_0080334 3300035398 Unclassified 2069
119 Ga0373927_0170698 3300035695 Unclassified 1426
120 Ga0373933_0061388 3300035724 Unclassified 2268
121 Ga0373937_0048174 3300036401 Unclassified 3900
122 Ga0373937_0097836 3300036401 Bacteria 2722
123 Ga0316584_0138619 3300036712 Unclassified 1815
124 Ga0395905_0040577 3300037471 Bacteria 4367
125 Ga0451798_0087215 3300041458 Bacteria 1093
126 Ga0451807_0004618 3300041486 Unclassified 730
127 Ga0451577_0004760 3300042876 Bacteria 14202
128 Ga0451577_0006382 3300042876 Bacteria 11771
129 Ga0451577_0202187 3300042876 Bacteria 1793
130 Ga0453684_0002094 3300044712 Bacteria 50465
131 Ga0453684_0012850 3300044712 Bacteria 13718
132 Ga0453684_0015990 3300044712 Bacteria 11792
133 Ga0453684_0336804 3300044712 Bacteria 1705
134 Ga0453684_0717203 3300044712 Bacteria 1085
135 Ga0451576_0181455 3300045051 Bacteria 2198
136 Ga0451576_0530533 3300045051 Bacteria 1237
137 Ga0451576_0634269 3300045051 Unclassified 1123
138 Ga0451576_0702877 3300045051 Bacteria 1062
139 Ga0451576_0711270 3300045051 Unclassified 1055
140 Ga0495592_0167507 3300046454 Bacteria 1507
141 Ga0495629_0033878 3300046459 Unclassified 3612
142 Ga0495618_0022495 3300046514 Unclassified 3893
143 Ga0495628_0257815 3300046516 Bacteria 1300
144 Ga0495630_0126947 3300046517 Bacteria 1936
145 Ga0495630_0353359 3300046517 Bacteria 1125
146 Ga0495586_0001954 3300046535 Bacteria 11243
147 Ga0495586_0005532 3300046535 Bacteria 6756
148 Ga0495586_0031498 3300046535 Bacteria 2841
149 Ga0495586_0162026 3300046535 Bacteria 1262
150 Ga0495645_0036592 3300046543 Unclassified 3578
151 Ga0495667_0033855 3300046559 Bacteria 3418
152 Ga0495667_0056883 3300046559 Bacteria 2571
153 Ga0495634_0000900 3300046642 Bacteria 28505
154 Ga0495635_0025860 3300046663 Unclassified 4088
155 Ga0495599_0081725 3300046678 Bacteria 2018
156 Ga0495599_0166235 3300046678 Bacteria 1362
157 Ga0495658_0004100 3300046683 Bacteria 7178
158 Ga0495613_0004256 3300046689 Bacteria 10719
159 Ga0495613_0023450 3300046689 Bacteria 4597
160 Ga0495680_0015110 3300047322 Bacteria 6667
161 Ga0496115_0033452 3300048918 Unclassified 4059
162 nmdc:mga08y16_147928_c1 3300050511 Bacteria 2441
163 nmdc:mga08y16_241301_c1 3300050511 Bacteria 1868
164 nmdc:mga0a205_321051_c1 3300050515 Unclassified 1419
165 Ga0495601_0036555 3300053077 Bacteria 3068
166 Ga0500650_0063978 3300053098 Bacteria 1718
167 Ga0070689_100025265
168 Ga0065707_10128796
169 Ga0070658_10058317
170 Ga0068869_100266661
171 Ga0070680_100312441
172 Ga0068868_100268088
173 Ga0070689_100001567
174 Ga0070689_100006700
175 Ga0070689_100102589
176 Ga0070689_100150053
177 Ga0070689_100525719
178 Ga0070691_10101127
179 Ga0070675_100160794
180 Ga0070688_100094660
181 Ga0070714_100004453
182 Ga0070711_100000512
183 Ga0070711_100393743
184 Ga0070681_10043018
185 Ga0070681_10160862
186 Ga0070685_10009382
187 Ga0070706_100687877
188 Ga0070686_100004425
189 Ga0070686_100232526
190 Ga0070704_100514246
191 Ga0068855_100031105
192 Ga0068855_100204504
193 Ga0068855_100333014
194 Ga0068857_100000452
195 Ga0068859_100116331
196 Ga0068859_101108537
197 Ga0068864_100069755
198 Ga0068863_100012897
199 Ga0075433_10627477
200 Ga0075436_100050151
201 Ga0097620_100116325
202 Ga0097620_101108666
203 Ga0105240_10032062
204 Ga0105240_10057172
205 Ga0105240_10260702
206 Ga0111539_10308674
207 Ga0111539_10444094
208 Ga0105243_10592923
209 Ga0105242_10185945
210 Ga0105248_10063811
211 Ga0105248_10108442
212 Ga0105248_10851026
213 Ga0157370_10033943
214 Ga0157370_10092843
215 Ga0157369_10919507
216 Ga0157374_10869773
217 Ga0157378_10082954
218 Ga0157378_10243732
219 Ga0163163_10312935
220 Ga0157380_10346643
221 Ga0157376_10104413
222 Ga0157376_10565769
223 Ga0163161_10872862
224 Ga0207643_10066194
225 Ga0207705_10553416
226 Ga0207707_10034114
227 Ga0207707_10216345
228 Ga0207695_10036982
229 Ga0207695_10053718
230 Ga0207695_10289301
231 Ga0207695_10360409
232 Ga0207652_10049578
233 Ga0207664_10006983
234 Ga0207686_10202165
235 Ga0207670_10001402
236 Ga0207670_10016314
237 Ga0207670_10139163
238 Ga0207711_10170113
239 Ga0207711_10288034
240 Ga0207667_10145318
241 Ga0207667_10162847
242 Ga0207667_10709620
243 Ga0207677_10264833
244 Ga0207708_10061073
245 Ga0207702_10483625
246 Ga0207676_10077854
247 Ga0207674_10727892
248 Ga0207698_10552619
249 Ga0265337_1000362
250 Ga0265337_1024948
251 Ga0265326_10005033
252 Ga0265323_10000183
253 Ga0265336_10001412
254 Ga0265338_10000138
255 Ga0265338_10000184
256 Ga0265338_10001365
257 Ga0265338_10001550
258 Ga0265338_10001968
259 Ga0265338_10002298
260 Ga0265338_10006014
261 Ga0265338_10010037
262 Ga0265338_10230655
263 Ga0265324_10063794
264 Ga0265332_10011783
265 Ga0265328_10059606
266 Ga0265320_10000296
267 Ga0265320_10009619
268 Ga0265320_10141245
269 Ga0265329_10001712
270 Ga0265329_10074763
271 Ga0265340_10012055
272 Ga0265327_10084644
273 Ga0265316_10026594
274 Ga0265316_10027138
275 Ga0265316_10261651
276 Ga0265314_10000020
277 Ga0307409_100350413
278 Ga0316583_10071480
279 Ga0373954_0031181
280 Ga0373954_0145023
281 Ga0373956_0004021
282 Ga0373956_0234097
283 Ga0373955_0294903
284 Ga0316574_0080334
285 Ga0373927_0170698
286 Ga0373933_0061388
287 Ga0373937_0048174
288 Ga0373937_0097836
289 Ga0316584_0138619
290 Ga0395905_0040577
291 Ga0451798_0087215
292 Ga0451807_0004618
293 Ga0451577_0004760
294 Ga0451577_0006382
295 Ga0451577_0202187
296 Ga0453684_0002094
297 Ga0453684_0012850
298 Ga0453684_0015990
299 Ga0453684_0336804
300 Ga0453684_0717203
301 Ga0451576_0181455
302 Ga0451576_0530533
303 Ga0451576_0634269
304 Ga0451576_0702877
305 Ga0451576_0711270
306 Ga0495592_0167507
307 Ga0495629_0033878
308 Ga0495618_0022495
309 Ga0495628_0257815
310 Ga0495630_0126947
311 Ga0495630_0353359
312 Ga0495586_0001954
313 Ga0495586_0005532
314 Ga0495586_0031498
315 Ga0495586_0162026
316 Ga0495645_0036592
317 Ga0495667_0033855
318 Ga0495667_0056883
319 Ga0495634_0000900
320 Ga0495635_0025860
321 Ga0495599_0081725
322 Ga0495599_0166235
323 Ga0495658_0004100
324 Ga0495613_0004256
325 Ga0495613_0023450
326 Ga0495680_0015110
327 Ga0496115_0033452
328 nmdc:mga08y16_147928_c1
329 nmdc:mga08y16_241301_c1
330 nmdc:mga0a205_321051_c1
331 Ga0495601_0036555
332 Ga0500650_0063978

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01618

MotA_ExbB

MotA/TolQ/ExbB proton channel family

100

224

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ye4-assembly1.cif.gz_C structure of exbb pentamer from serratia marcescens by single particle cryo electron microscopy 0.7621 17 228
5sv0-assembly1.cif.gz_B structure of the exbb/exbd complex from e. coli at ph 7.0 0.7421 17 228
6tyi-assembly1.cif.gz_D exbb-exbd complex in msp1e3d1 nanodisc 0.7397 20 228
5sv0-assembly2.cif.gz_J structure of the exbb/exbd complex from e. coli at ph 7.0 0.7388 29 228
5zfu-assembly1.cif.gz_F structure of the exbb/exbd hexameric complex (exbb6exbd3tm) 0.7284 29 228
ID Description Score Start End Superfamily
1ek8A01 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.6082 87 228 1.10.132.20
1ek8A01 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;Ribosome-recycling factor 0.5636 87 228 1.10.132.20
af_P52631_135_319_1.20.1050.20 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;STAT transcription factor, all-alpha domain 0.5295 34 230 1.20.1050.20
af_P42232_128_332_1.20.1050.20 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;STAT transcription factor, all-alpha domain 0.5295 32 228 1.20.1050.20
af_O93599_134_320_1.20.1050.20 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2;STAT transcription factor, all-alpha domain 0.5112 34 230 1.20.1050.20
ID Description Score Start End GO Terms
AF-A0A1V6GE54-F1-model_v4 deleted 0.8566 16 233
AF-A0A354R6Q8-F1-model_v4 MotA/TolQ/ExbB proton channel domain-containing protein 0.8497 16 233 GO:0005886
GO:0017038
AF-A0A2V5RHU3-F1-model_v4 Biopolymer transporter 0.8472 16 237 GO:0005886
GO:0017038
AF-A0A3C1G137-F1-model_v4 DUF2341 domain-containing protein 0.8309 16 229 GO:0005886
GO:0017038
AF-A0A7X7SA13-F1-model_v4 MotA/TolQ/ExbB proton channel domain-containing protein 0.8302 5 233 GO:0005886
GO:0017038

Map