F247236

General Info

Members Datasets Scaffolds Average Seq Length
165 105 163 195

Family's Representative Sequence

Representative Sequence 3300053150|Ga0500603_053965|Ga0500603_053965_419_1069
Length 216
Sequence MPDMSTTKPSSRPPTLADLDALPANIVGEIIEGVLYTMTKPRAPHQRTTRLIGGRVGDPFDNGIGGPGGWWIIPEPGIELPNDTKEISPDVAGWRRERIPDLPVDEPIRVVPDWVCEILSPTTRRHDMLRKQPYYAKIGVPYMWLVDIEARVLTIYRLESSDWRMIGTYSDETEARIAPFDAVPLDVMSWWPASPPPSKQPERPHESRDRQAAQEL

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
37 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
38 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
39 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
40 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
41 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
49 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
53 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
56 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
57 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
65 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
66 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
67 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
72 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
73 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
74 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
75 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
76 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
77 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
78 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
79 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
80 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
81 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
82 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
83 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
84 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
85 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
86 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
87 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
88 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
89 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
90 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
91 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
92 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
93 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
94 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
95 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
96 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
97 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
98 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
99 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
100 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
101 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
102 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
104 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
105 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.39
Metatranscriptomes 0.61
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.48
Nodule 0
Rhizoplane 0
Rhizosphere 59.39
Stem 0
Stem Tuber 0
Unclassified 12.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10091095 3300003323 Bacteria 1274
2 Ga0070690_100006977 3300005330 Bacteria 6436
3 Ga0070690_100146392 3300005330 Bacteria 1608
4 Ga0070690_100232976 3300005330 Unclassified 1296
5 Ga0070680_100422474 3300005336 Bacteria 1137
6 Ga0070682_100013419 3300005337 Bacteria 4712
7 Ga0068868_100223038 3300005338 Bacteria 1579
8 Ga0070689_100000013 3300005340 Bacteria 206982
9 Ga0070689_100013147 3300005340 Bacteria 5983
10 Ga0070691_10112321 3300005341 Bacteria 1364
11 Ga0070668_100124607 3300005347 Bacteria 2063
12 Ga0070668_100541955 3300005347 Bacteria 1012
13 Ga0070688_100020195 3300005365 Bacteria 3870
14 Ga0070667_100071963 3300005367 Unclassified 2945
15 Ga0070685_10636716 3300005466 Bacteria 771
16 Ga0070698_100708506 3300005471 Unclassified 949
17 Ga0070699_100627669 3300005518 Unclassified 980
18 Ga0070684_101152896 3300005535 Bacteria 729
19 Ga0070665_100480449 3300005548 Unclassified 1253
20 Ga0068861_100157303 3300005719 Bacteria 1871
21 Ga0068861_100866244 3300005719 Bacteria 853
22 Ga0068863_100917152 3300005841 Bacteria 877
23 Ga0068863_101168999 3300005841 Archaea 775
24 Ga0068860_100113393 3300005843 Unclassified 2592
25 Ga0068860_100237832 3300005843 Bacteria 1771
26 Ga0070717_10618372 3300006028 Bacteria 983
27 Ga0075430_100019032 3300006846 Bacteria 5842
28 Ga0068865_100791692 3300006881 Bacteria 817
29 Ga0075436_100117642 3300006914 Bacteria 1858
30 Ga0097620_100037324 3300006931 Bacteria 4876
31 Ga0105245_10043160 3300009098 Bacteria 4023
32 Ga0105245_10071906 3300009098 Bacteria 3142
33 Ga0105243_10064546 3300009148 Unclassified 2939
34 Ga0105243_10210102 3300009148 Bacteria 1713
35 Ga0105249_10047002 3300009553 Bacteria 3931
36 Ga0105249_10058605 3300009553 Bacteria 3529
37 Ga0105249_10068470 3300009553 Bacteria 3274
38 Ga0105249_10068836 3300009553 Bacteria 3265
39 Ga0105249_10088485 3300009553 Bacteria 2893
40 Ga0157378_10886065 3300013297 Bacteria 922
41 Ga0207687_10078558 3300025927 Unclassified 2376
42 Ga0207687_10359213 3300025927 Bacteria 1188
43 Ga0207670_10000004 3300025936 Bacteria 707262
44 Ga0207712_10035080 3300025961 Bacteria 3404
45 Ga0207712_10048951 3300025961 Bacteria 2942
46 Ga0207712_10067457 3300025961 Bacteria 2560
47 Ga0207712_10071407 3300025961 Bacteria 2497
48 Ga0207668_10273944 3300025972 Bacteria 1381
49 Ga0207641_10823418 3300026088 Bacteria 919
50 Ga0207676_10422008 3300026095 Bacteria 1251
51 Ga0207675_100273264 3300026118 Unclassified 1640
52 Ga0207675_100572162 3300026118 Bacteria 1131
53 Ga0268264_10109329 3300028381 Bacteria 2418
54 Ga0265337_1108991 3300028556 Bacteria 752
55 Ga0265319_1000054 3300028563 Bacteria 93849
56 Ga0265318_10002110 3300028577 Bacteria 10859
57 Ga0307517_10017980 3300028786 Bacteria 9170
58 Ga0307517_10020124 3300028786 Bacteria 8521
59 Ga0307517_10055719 3300028786 Bacteria 3875
60 Ga0307517_10158671 3300028786 Bacteria 1525
61 Ga0307515_10003251 3300028794 Bacteria 34391
62 Ga0307515_10040131 3300028794 Bacteria 7412
63 Ga0307515_10217184 3300028794 Bacteria 1740
64 Ga0307515_10605634 3300028794 Bacteria 706
65 Ga0307511_10235414 3300030521 Bacteria 900
66 Ga0265330_10000056 3300031235 Bacteria 100283
67 Ga0265332_10000050 3300031238 Bacteria 112449
68 Ga0265332_10002094 3300031238 Bacteria 10360
69 Ga0265332_10003474 3300031238 Bacteria 7586
70 Ga0265328_10001906 3300031239 Bacteria 9473
71 Ga0265320_10000422 3300031240 Bacteria 33571
72 Ga0265329_10002075 3300031242 Bacteria 9326
73 Ga0265340_10000250 3300031247 Bacteria 28060
74 Ga0265339_10008876 3300031249 Bacteria 6365
75 Ga0265331_10000356 3300031250 Bacteria 48369
76 Ga0265327_10001379 3300031251 Bacteria 31081
77 Ga0265327_10002559 3300031251 Bacteria 18866
78 Ga0265316_10005609 3300031344 Bacteria 12159
79 Ga0307513_10004476 3300031456 Bacteria 18653
80 Ga0307509_10000042 3300031507 Bacteria 178442
81 Ga0307509_10000172 3300031507 Bacteria 102211
82 Ga0307509_10088016 3300031507 Bacteria 3189
83 Ga0265313_10000009 3300031595 Bacteria 169607
84 Ga0307508_10171225 3300031616 Bacteria 1775
85 Ga0307508_10181078 3300031616 Bacteria 1709
86 Ga0307514_10163290 3300031649 Bacteria 1470
87 Ga0316579_10098887 3300031691 Bacteria 1396
88 Ga0316579_10203471 3300031691 Unclassified 957
89 Ga0265314_10000423 3300031711 Bacteria 56719
90 Ga0265342_10000489 3300031712 Bacteria 42825
91 Ga0307516_10014140 3300031730 Bacteria 8459
92 Ga0307406_10044714 3300031901 Bacteria 2776
93 Ga0307406_10068142 3300031901 Bacteria 2322
94 Ga0307406_10070245 3300031901 Bacteria 2292
95 Ga0307406_10164843 3300031901 Bacteria 1597
96 Ga0307406_10278778 3300031901 Bacteria 1274
97 Ga0307415_100165619 3300032126 Bacteria 1718
98 Ga0307415_100255365 3300032126 Bacteria 1427
99 Ga0316593_10225629 3300032168 Bacteria 697
100 Ga0373949_0000014 3300035090 Bacteria 62272
101 Ga0373949_0000841 3300035090 Bacteria 9797
102 Ga0373936_0000011 3300035113 Bacteria 248623
103 Ga0373936_0000018 3300035113 Bacteria 156705
104 Ga0373936_0000019 3300035113 Bacteria 146661
105 Ga0373954_0252708 3300035118 Bacteria 868
106 Ga0373961_0000084 3300035241 Bacteria 50639
107 Ga0373961_0000209 3300035241 Bacteria 27659
108 Ga0395905_0682861 3300037471 Bacteria 929
109 Ga0451851_0593563 3300041507 Bacteria 949
110 Ga0495638_0454623 3300046460 Bacteria 653
111 Ga0495649_0081157 3300046694 Unclassified 1734
112 Ga0495686_0014840 3300047472 Bacteria 5349
113 Ga0501076_0965331 3300049592 Bacteria 702
114 Ga0501045_0682304 3300049824 Bacteria 758
115 Ga0500635_0027510 3300053080 Bacteria 1808
116 Ga0500578_0009222 3300053086 Bacteria 6412
117 Ga0500646_0003028 3300053090 Bacteria 4312
118 Ga0500646_0025050 3300053090 Bacteria 1609
119 Ga0500646_0028553 3300053090 Bacteria 1523
120 Ga0500646_0129345 3300053090 Bacteria 819
121 Ga0500583_0002730 3300053092 Bacteria 5385
122 Ga0500583_0094137 3300053092 Bacteria 1461
123 Ga0500583_0128208 3300053092 Bacteria 1258
124 Ga0500583_0270108 3300053092 Bacteria 837
125 Ga0500651_0183935 3300053093 Bacteria 1240
126 Ga0500566_0003794 3300053094 Bacteria 9012
127 Ga0500566_0013276 3300053094 Unclassified 4851
128 Ga0500566_0014106 3300053094 Bacteria 4696
129 Ga0500566_0026115 3300053094 Bacteria 3419
130 Ga0500566_0063643 3300053094 Unclassified 2083
131 Ga0500566_0083966 3300053094 Bacteria 1768
132 Ga0500566_0200759 3300053094 Bacteria 1007
133 Ga0500566_0204438 3300053094 Bacteria 994
134 Ga0500640_000040 3300053095 Bacteria 19661
135 Ga0500654_116432 3300053099 Unclassified 1071
136 Ga0500554_000116 3300053102 Bacteria 15685
137 Ga0500555_003034 3300053103 Bacteria 4799
138 Ga0500556_0214298 3300053104 Bacteria 760
139 Ga0500572_046869 3300053111 Bacteria 1275
140 Ga0500595_000541 3300053119 Bacteria 22704
141 Ga0500597_076701 3300053120 Bacteria 1448
142 Ga0500614_000406 3300053123 Bacteria 11238
143 Ga0500617_060656 3300053124 Bacteria 1675
144 Ga0500617_118128 3300053124 Bacteria 1098
145 Ga0500617_153768 3300053124 Bacteria 907
146 Ga0500642_0106112 3300053130 Bacteria 1309
147 Ga0500642_0204059 3300053130 Bacteria 919
148 Ga0500564_244428 3300053138 Bacteria 714
149 Ga0500585_159797 3300053144 Bacteria 780
150 Ga0500588_0010872 3300053146 Bacteria 2213
151 Ga0500603_053965 3300053150 Bacteria 1108
152 Ga0500620_134552 3300053155 Bacteria 865
153 Ga0500622_0048053 3300053156 Bacteria 2203
154 Ga0500622_0119814 3300053156 Bacteria 1277
155 Ga0500622_0184766 3300053156 Bacteria 960
156 Ga0500639_150982 3300053163 Bacteria 1071
157 Ga0500636_0137344 3300053177 Bacteria 1356
158 Ga0500576_137711 3300053725 Bacteria 934
159 Ga0500596_037783 3300053735 Bacteria 764
160 Ga0500601_022173 3300053737 Bacteria 735
161 Ga0501084_0680057 3300054114 Bacteria 868
162 Ga0590071_061120 3300059421 Unclassified 921
163 Ga0590075_002125 3300059424 Bacteria 4762

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049824 Ga0501045_0682304 Ga0501045_0682304_240_740 166
2 3300053094 Ga0500566_0014106 Ga0500566_0014106_3942_4499 168
3 3300005367 Ga0070667_100071963 Ga0070667_1000719633 171
4 3300009098 Ga0105245_10043160 Ga0105245_100431602 173
5 3300025927 Ga0207687_10078558 Ga0207687_100785582 173
6 3300049592 Ga0501076_0965331 Ga0501076_0965331_68_634 174
7 3300054114 Ga0501084_0680057 Ga0501084_0680057_204_770 174
8 3300047472 Ga0495686_0014840 Ga0495686_0014840_3481_4020 179
9 3300005471 Ga0070698_100708506 Ga0070698_1007085062 185
10 3300005719 Ga0068861_100157303 Ga0068861_1001573032 185
11 3300005843 Ga0068860_100237832 Ga0068860_1002378322 185
12 3300009553 Ga0105249_10047002 Ga0105249_100470024 185
13 3300009553 Ga0105249_10058605 Ga0105249_100586053 185
14 3300025961 Ga0207712_10048951 Ga0207712_100489514 185
15 3300026118 Ga0207675_100273264 Ga0207675_1002732642 185
16 3300028381 Ga0268264_10109329 Ga0268264_101093293 185
17 3300028786 Ga0307517_10055719 Ga0307517_100557193 185
18 3300031649 Ga0307514_10163290 Ga0307514_101632901 185
19 3300031730 Ga0307516_10014140 Ga0307516_100141404 185
20 3300031901 Ga0307406_10044714 Ga0307406_100447142 185
21 3300031901 Ga0307406_10068142 Ga0307406_100681423 185
22 3300032126 Ga0307415_100255365 Ga0307415_1002553652 185
23 3300053090 Ga0500646_0003028 Ga0500646_0003028_1269_1826 185
24 3300053092 Ga0500583_0128208 Ga0500583_0128208_277_834 185
25 3300053104 Ga0500556_0214298 Ga0500556_0214298_56_613 185
26 3300053130 Ga0500642_0204059 Ga0500642_0204059_332_889 185
27 3300053156 Ga0500622_0048053 Ga0500622_0048053_84_641 185
28 3300005336 Ga0070680_100422474 Ga0070680_1004224741 186
29 3300005341 Ga0070691_10112321 Ga0070691_101123212 186
30 3300005347 Ga0070668_100124607 Ga0070668_1001246074 186
31 3300005466 Ga0070685_10636716 Ga0070685_106367161 186
32 3300005841 Ga0068863_101168999 Ga0068863_1011689991 186
33 3300006914 Ga0075436_100117642 Ga0075436_1001176422 186
34 3300013297 Ga0157378_10886065 Ga0157378_108860652 186
35 3300031616 Ga0307508_10171225 Ga0307508_101712252 186
36 3300031691 Ga0316579_10098887 Ga0316579_100988871 186
37 3300031691 Ga0316579_10203471 Ga0316579_102034712 186
38 3300032168 Ga0316593_10225629 Ga0316593_102256291 186
39 3300037471 Ga0395905_0682861 Ga0395905_0682861_275_838 186
40 3300059421 Ga0590071_061120 Ga0590071_061120_250_822 186
41 3300059424 Ga0590075_002125 Ga0590075_002125_4128_4700 186
42 3300005337 Ga0070682_100013419 Ga0070682_1000134192 187
43 3300006881 Ga0068865_100791692 Ga0068865_1007916922 187
44 3300053103 Ga0500555_003034 Ga0500555_003034_249_824 187
45 3300006846 Ga0075430_100019032 Ga0075430_1000190325 188
46 3300053094 Ga0500566_0026115 Ga0500566_0026115_855_1427 188
47 3300025927 Ga0207687_10359213 Ga0207687_103592133 189
48 3300031238 Ga0265332_10002094 Ga0265332_100020949 189
49 3300031238 Ga0265332_10003474 Ga0265332_1000347410 189
50 3300053092 Ga0500583_0270108 Ga0500583_0270108_135_707 189
51 3300009148 Ga0105243_10210102 Ga0105243_102101022 190
52 3300028794 Ga0307515_10605634 Ga0307515_106056341 190
53 3300030521 Ga0307511_10235414 Ga0307511_102354141 190
54 3300053146 Ga0500588_0010872 Ga0500588_0010872_1398_1985 190
55 3300005330 Ga0070690_100006977 Ga0070690_1000069777 191
56 3300005340 Ga0070689_100000013 Ga0070689_100000013135 191
57 3300005340 Ga0070689_100013147 Ga0070689_1000131472 191
58 3300005347 Ga0070668_100541955 Ga0070668_1005419551 191
59 3300005365 Ga0070688_100020195 Ga0070688_1000201954 191
60 3300005518 Ga0070699_100627669 Ga0070699_1006276691 191
61 3300005548 Ga0070665_100480449 Ga0070665_1004804491 191
62 3300009553 Ga0105249_10068836 Ga0105249_100688363 191
63 3300025936 Ga0207670_10000004 Ga0207670_10000004519 191
64 3300025961 Ga0207712_10071407 Ga0207712_100714071 191
65 3300025972 Ga0207668_10273944 Ga0207668_102739441 191
66 3300028786 Ga0307517_10055719 Ga0307517_100557194 191
67 3300031251 Ga0265327_10001379 Ga0265327_1000137911 191
68 3300031251 Ga0265327_10002559 Ga0265327_100025597 191
69 3300031456 Ga0307513_10004476 Ga0307513_1000447614 191
70 3300031901 Ga0307406_10070245 Ga0307406_100702451 191
71 3300031901 Ga0307406_10164843 Ga0307406_101648431 191
72 3300031901 Ga0307406_10278778 Ga0307406_102787782 191
73 3300032126 Ga0307415_100165619 Ga0307415_1001656191 191
74 3300046460 Ga0495638_0454623 Ga0495638_0454623_25_600 191
75 3300053086 Ga0500578_0009222 Ga0500578_0009222_3008_3595 191
76 3300053124 Ga0500617_060656 Ga0500617_060656_182_757 191
77 3300053156 Ga0500622_0048053 Ga0500622_0048053_697_1272 191
78 3300009098 Ga0105245_10071906 Ga0105245_100719063 192
79 3300031616 Ga0307508_10181078 Ga0307508_101810782 192
80 3300035113 Ga0373936_0000018 Ga0373936_0000018_151326_151913 192
81 3300035241 Ga0373961_0000084 Ga0373961_0000084_42793_43383 192
82 3300046694 Ga0495649_0081157 Ga0495649_0081157_805_1395 192
83 3300053090 Ga0500646_0025050 Ga0500646_0025050_314_904 192
84 3300053094 Ga0500566_0003794 Ga0500566_0003794_2167_2757 192
85 3300053094 Ga0500566_0013276 Ga0500566_0013276_3174_3761 192
86 3300053095 Ga0500640_000040 Ga0500640_000040_17900_18490 192
87 3300053102 Ga0500554_000116 Ga0500554_000116_661_1251 192
88 3300053111 Ga0500572_046869 Ga0500572_046869_259_849 192
89 3300053119 Ga0500595_000541 Ga0500595_000541_4069_4659 192
90 3300053123 Ga0500614_000406 Ga0500614_000406_2177_2767 192
91 3300053725 Ga0500576_137711 Ga0500576_137711_86_676 192
92 3300053737 Ga0500601_022173 Ga0500601_022173_59_649 192
93 3300003323 rootH1_10091095 rootH1_100910951 193
94 3300005330 Ga0070690_100146392 Ga0070690_1001463922 193
95 3300005330 Ga0070690_100232976 Ga0070690_1002329762 193
96 3300005338 Ga0068868_100223038 Ga0068868_1002230382 193
97 3300005535 Ga0070684_101152896 Ga0070684_1011528961 193
98 3300005719 Ga0068861_100866244 Ga0068861_1008662441 193
99 3300005841 Ga0068863_100917152 Ga0068863_1009171522 193
100 3300005843 Ga0068860_100113393 Ga0068860_1001133932 193
101 3300006028 Ga0070717_10618372 Ga0070717_106183721 193
102 3300006931 Ga0097620_100037324 Ga0097620_1000373244 193
103 3300009148 Ga0105243_10064546 Ga0105243_100645463 193
104 3300009553 Ga0105249_10068470 Ga0105249_100684703 193
105 3300009553 Ga0105249_10088485 Ga0105249_100884853 193
106 3300025961 Ga0207712_10035080 Ga0207712_100350803 193
107 3300025961 Ga0207712_10067457 Ga0207712_100674574 193
108 3300026088 Ga0207641_10823418 Ga0207641_108234181 193
109 3300026095 Ga0207676_10422008 Ga0207676_104220082 193
110 3300026118 Ga0207675_100572162 Ga0207675_1005721622 193
111 3300028556 Ga0265337_1108991 Ga0265337_11089911 193
112 3300028563 Ga0265319_1000054 Ga0265319_100005471 193
113 3300028577 Ga0265318_10002110 Ga0265318_100021106 193
114 3300028786 Ga0307517_10017980 Ga0307517_100179802 193
115 3300028786 Ga0307517_10020124 Ga0307517_100201248 193
116 3300028786 Ga0307517_10158671 Ga0307517_101586712 193
117 3300028794 Ga0307515_10003251 Ga0307515_1000325115 193
118 3300028794 Ga0307515_10040131 Ga0307515_100401313 193
119 3300028794 Ga0307515_10217184 Ga0307515_102171842 193
120 3300031235 Ga0265330_10000056 Ga0265330_1000005666 193
121 3300031238 Ga0265332_10000050 Ga0265332_1000005069 193
122 3300031239 Ga0265328_10001906 Ga0265328_100019066 193
123 3300031240 Ga0265320_10000422 Ga0265320_100004226 193
124 3300031242 Ga0265329_10002075 Ga0265329_100020756 193
125 3300031247 Ga0265340_10000250 Ga0265340_1000025020 193
126 3300031249 Ga0265339_10008876 Ga0265339_100088766 193
127 3300031250 Ga0265331_10000356 Ga0265331_1000035633 193
128 3300031344 Ga0265316_10005609 Ga0265316_100056096 193
129 3300031507 Ga0307509_10000042 Ga0307509_10000042143 193
130 3300031507 Ga0307509_10000172 Ga0307509_1000017271 193
131 3300031507 Ga0307509_10088016 Ga0307509_100880162 193
132 3300031595 Ga0265313_10000009 Ga0265313_1000000989 193
133 3300031711 Ga0265314_10000423 Ga0265314_1000042344 193
134 3300031712 Ga0265342_10000489 Ga0265342_1000048928 193
135 3300035090 Ga0373949_0000014 Ga0373949_0000014_16137_16751 193
136 3300035090 Ga0373949_0000841 Ga0373949_0000841_3935_4525 193
137 3300035113 Ga0373936_0000011 Ga0373936_0000011_247454_248071 193
138 3300035113 Ga0373936_0000019 Ga0373936_0000019_10852_11445 193
139 3300035118 Ga0373954_0252708 Ga0373954_0252708_259_852 193
140 3300035241 Ga0373961_0000209 Ga0373961_0000209_8725_9321 193
141 3300041507 Ga0451851_0593563 Ga0451851_0593563_74_715 193
142 3300053080 Ga0500635_0027510 Ga0500635_0027510_830_1423 193
143 3300053090 Ga0500646_0028553 Ga0500646_0028553_593_1192 193
144 3300053090 Ga0500646_0129345 Ga0500646_0129345_100_702 193
145 3300053092 Ga0500583_0002730 Ga0500583_0002730_4685_5266 193
146 3300053092 Ga0500583_0094137 Ga0500583_0094137_600_1244 193
147 3300053093 Ga0500651_0183935 Ga0500651_0183935_610_1209 193
148 3300053094 Ga0500566_0063643 Ga0500566_0063643_279_872 193
149 3300053094 Ga0500566_0083966 Ga0500566_0083966_657_1274 193
150 3300053094 Ga0500566_0200759 Ga0500566_0200759_94_684 193
151 3300053094 Ga0500566_0204438 Ga0500566_0204438_380_970 193
152 3300053099 Ga0500654_116432 Ga0500654_116432_273_881 193
153 3300053120 Ga0500597_076701 Ga0500597_076701_10_615 193
154 3300053124 Ga0500617_118128 Ga0500617_118128_418_1011 193
155 3300053124 Ga0500617_153768 Ga0500617_153768_37_645 193
156 3300053130 Ga0500642_0106112 Ga0500642_0106112_145_741 193
157 3300053138 Ga0500564_244428 Ga0500564_244428_83_676 193
158 3300053144 Ga0500585_159797 Ga0500585_159797_138_734 193
159 3300053150 Ga0500603_053965 Ga0500603_053965_419_1069 193
160 3300053155 Ga0500620_134552 Ga0500620_134552_235_828 193
161 3300053156 Ga0500622_0119814 Ga0500622_0119814_514_1122 193
162 3300053156 Ga0500622_0184766 Ga0500622_0184766_70_669 193
163 3300053163 Ga0500639_150982 Ga0500639_150982_319_912 193
164 3300053177 Ga0500636_0137344 Ga0500636_0137344_377_1027 193
165 3300053735 Ga0500596_037783 Ga0500596_037783_25_618 193

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05685

Uma2

Putative restriction endonuclease

16

187

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cnx-assembly2.cif.gz_C-2 crystal structure of a putative dehydratase from the ntf2-like family (sav_4671) from streptomyces avermitilis at 2.10 a resolution 0.9418 146 162
6dg5-assembly1.cif.gz_B structure of a de novo designed interleukin-2/interleukin-15 mimetic complex with il-2rb and il-2rg 0.9045 146 163
6ww7-assembly1.cif.gz_A structure of the human er membrane protein complex in a lipid nanodisc 0.8893 136 164
5cj0-assembly1.cif.gz_A crystal structure of amino acids 1631-1692 of myh7 0.883 136 164
6okh-assembly1.cif.gz_B structure of an uncharacterized protein from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.8762 12 185
ID Description Score Start End Superfamily
3cnxA00 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.9432 146 162 3.10.450.50
af_Q8N766_273_786_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8703 136 164 2.130.10.10
1i8lB01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8665 146 163 2.60.40.10
af_P97865_4_310_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8611 146 163 2.130.10.10
af_F4IZ09_56_391_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8609 146 166 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A150SL92-F1-model_v4 Putative restriction endonuclease domain-containing protein 0.9825 8 185
AF-A0A1H4FNP5-F1-model_v4 Putative restriction endonuclease 0.9818 107 184 GO:0004519
AF-A0A7C3D8W6-F1-model_v4 Uma2 family endonuclease 0.9775 104 186 GO:0004519
AF-A0A0K1Q0E8-F1-model_v4 Putative restriction endonuclease domain-containing protein 0.9737 81 185
AF-A0A7X4J927-F1-model_v4 deleted 0.9702 106 184

Feature Viewer

pLDDT pTM Quality
90.05 0.85 High
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Predicted Structure (AlphaFold2)

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