F247202

General Info

Members Datasets Scaffolds Average Seq Length
165 87 330 222

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_633743_c1|nmdc:mga08y16_633743_c1_160_942
Length 260
Sequence VGVHRAAGGAPGGRRADHARAHRAPPPPRAPRGLTIGLRVALEVAPKRAFASALDWPGWSRSGKTPDEAIVALLDYAPRYAKVAKRAKVAFSPPATPRGVDVVERPKGGSGTEFGVPGSPTKSEDEDPSPAELRRLVALLEAAWASFDAAARAAKGVTLTTGPRGGGRTRDKMIGHVLEAELAYLGQLGSRPPDRPSDAARALSVVRDAFIETLEARVAGGPLPNPRNTKKPWSPRYTIRRSAWHSLDHAWELEDRSKRA

Samples

Sample ID Description Type Environment
1 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
26 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
27 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
28 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
32 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
33 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
34 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
35 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
36 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
37 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
38 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
39 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
40 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
41 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
42 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
43 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
44 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
45 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
46 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
47 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
48 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
49 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
50 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
51 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
64 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
65 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
66 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
67 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
68 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
69 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
70 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
71 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
72 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
73 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
74 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
75 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
76 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
81 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
82 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
83 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
84 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
85 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
86 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
87 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.61
Nodule 0
Rhizoplane 0.61
Rhizosphere 98.18
Stem 0
Stem Tuber 0
Unclassified 12.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08y16_633743_c1 3300050511 Bacteria 1075
2 JGI25406J46586_10015771 3300003203 Bacteria 3174
3 Ga0070680_100004112 3300005336 Bacteria 10899
4 Ga0070680_100005517 3300005336 Bacteria 9572
5 Ga0070687_100006473 3300005343 Bacteria 4803
6 Ga0070692_10234347 3300005345 Unclassified 1091
7 Ga0070705_100032577 3300005440 Unclassified 2896
8 Ga0070708_100002184 3300005445 Bacteria 15112
9 Ga0070708_100006137 3300005445 Bacteria 9561
10 Ga0070708_100017846 3300005445 Bacteria 5929
11 Ga0070708_100036709 3300005445 Bacteria 4275
12 Ga0070708_100070633 3300005445 Unclassified 3141
13 Ga0070708_100132521 3300005445 Bacteria 2307
14 Ga0070706_100008770 3300005467 Bacteria 9422
15 Ga0070706_100018115 3300005467 Bacteria 6497
16 Ga0070706_100095776 3300005467 Bacteria 2755
17 Ga0070706_100109597 3300005467 Unclassified 2569
18 Ga0070706_100118973 3300005467 Bacteria 2462
19 Ga0070706_100586520 3300005467 Bacteria 1036
20 Ga0070706_100616375 3300005467 Bacteria 1008
21 Ga0070707_100001659 3300005468 Bacteria 21551
22 Ga0070707_100010510 3300005468 Bacteria 8624
23 Ga0070707_100010870 3300005468 Bacteria 8480
24 Ga0070707_100043384 3300005468 Bacteria 4305
25 Ga0070707_100381803 3300005468 Unclassified 1368
26 Ga0070698_100005376 3300005471 Bacteria 14003
27 Ga0070698_100020426 3300005471 Bacteria 6941
28 Ga0070698_100149247 3300005471 Bacteria 2286
29 Ga0070698_100248007 3300005471 Bacteria 1713
30 Ga0070699_100019263 3300005518 Bacteria 5873
31 Ga0070699_100176998 3300005518 Bacteria 1892
32 Ga0070699_100269421 3300005518 Unclassified 1524
33 Ga0070697_100396419 3300005536 Bacteria 1197
34 Ga0070697_100554473 3300005536 Unclassified 1008
35 Ga0070696_100021538 3300005546 Bacteria 4370
36 Ga0070696_100106610 3300005546 Bacteria 2014
37 Ga0070696_100204026 3300005546 Bacteria 1477
38 Ga0068854_100033594 3300005578 Bacteria 3577
39 Ga0081539_10002698 3300005985 Bacteria 24088
40 Ga0070717_10006759 3300006028 Bacteria 8462
41 Ga0075365_10094681 3300006038 Unclassified 2039
42 Ga0075428_100497720 3300006844 Bacteria 1304
43 Ga0075436_100166970 3300006914 Bacteria 1553
44 Ga0114129_10197392 3300009147 Bacteria 2728
45 Ga0114129_10907781 3300009147 Bacteria 1116
46 Ga0105243_10119722 3300009148 Bacteria 2217
47 Ga0207684_10004086 3300025910 Bacteria 13909
48 Ga0207684_10009389 3300025910 Bacteria 8640
49 Ga0207684_10042000 3300025910 Bacteria 3876
50 Ga0207684_10101674 3300025910 Unclassified 2457
51 Ga0207684_10264637 3300025910 Bacteria 1484
52 Ga0207660_10001691 3300025917 Bacteria 14787
53 Ga0207646_10005013 3300025922 Bacteria 14106
54 Ga0207646_10029521 3300025922 Bacteria 4981
55 Ga0207646_10030837 3300025922 Bacteria 4858
56 Ga0207646_10147987 3300025922 Bacteria 2117
57 Ga0207646_10371485 3300025922 Unclassified 1292
58 Ga0209982_1007249 3300027552 Bacteria 1620
59 Ga0209983_1048615 3300027665 Unclassified 926
60 Ga0209971_1016625 3300027682 Bacteria 1744
61 Ga0209998_10000139 3300027717 Bacteria 27808
62 Ga0265318_10036520 3300028577 Bacteria 1885
63 Ga0265336_10079764 3300028666 Unclassified 977
64 Ga0265332_10053373 3300031238 Bacteria 1735
65 Ga0265325_10029481 3300031241 Bacteria 2949
66 Ga0265340_10043697 3300031247 Bacteria 2195
67 Ga0265313_10050542 3300031595 Bacteria 1994
68 Ga0265314_10054260 3300031711 Bacteria 2775
69 Ga0373955_0144925 3300035172 Unclassified 1395
70 Ga0373947_0057701 3300035725 Unclassified 2350
71 Ga0373937_0079212 3300036401 Bacteria 3037
72 Ga0395900_0023443 3300037418 Bacteria 6317
73 Ga0395900_0094728 3300037418 Bacteria 3067
74 Ga0395900_0250977 3300037418 Bacteria 1771
75 Ga0395898_0095267 3300037466 Bacteria 2860
76 Ga0395905_0158090 3300037471 Bacteria 2131
77 Ga0395905_0292207 3300037471 Bacteria 1516
78 Ga0436364_1534350 3300037853 Unclassified 987
79 Ga0395901_0072613 3300038443 Bacteria 3587
80 Ga0395901_0149616 3300038443 Bacteria 2453
81 Ga0450920_029343 3300042122 Bacteria 1080
82 Ga0450910_004513 3300042147 Bacteria 1878
83 Ga0495618_0043405 3300046514 Bacteria 2837
84 Ga0495652_0313433 3300046529 Unclassified 1136
85 Ga0495640_0257238 3300046533 Unclassified 1092
86 Ga0495600_0134884 3300046809 Bacteria 1604
87 Ga0496105_0219695 3300048908 Bacteria 1547
88 Ga0501031_0001818 3300049568 Bacteria 13411
89 Ga0501033_0115549 3300049570 Bacteria 1950
90 Ga0501033_0314377 3300049570 Bacteria 1101
91 Ga0501036_0094973 3300049572 Bacteria 2520
92 Ga0501036_0102836 3300049572 Bacteria 2416
93 Ga0501037_0114195 3300049573 Bacteria 1944
94 Ga0501038_0010770 3300049574 Bacteria 8359
95 Ga0501039_0003512 3300049575 Bacteria 11738
96 Ga0501039_0007387 3300049575 Bacteria 8381
97 Ga0501039_0124522 3300049575 Bacteria 2021
98 Ga0501040_0039709 3300049576 Bacteria 3201
99 Ga0501041_0013826 3300049577 Bacteria 4785
100 Ga0501041_0042130 3300049577 Bacteria 2773
101 Ga0501042_0008866 3300049578 Bacteria 6669
102 Ga0501043_0512205 3300049579 Bacteria 895
103 Ga0501046_0023440 3300049580 Bacteria 5078
104 Ga0501046_0036514 3300049580 Bacteria 3954
105 Ga0501048_0028061 3300049582 Bacteria 4087
106 Ga0501048_0268890 3300049582 Bacteria 1211
107 Ga0501048_0308965 3300049582 Bacteria 1125
108 Ga0501048_0675195 3300049582 Bacteria 742
109 Ga0501068_0009037 3300049584 Bacteria 5561
110 Ga0501068_0012656 3300049584 Bacteria 4788
111 Ga0501068_0108931 3300049584 Bacteria 1721
112 Ga0501068_0451867 3300049584 Unclassified 831
113 Ga0501069_0143796 3300049585 Bacteria 1369
114 Ga0501070_0061946 3300049586 Bacteria 3099
115 Ga0501070_0335044 3300049586 Bacteria 1229
116 Ga0501071_0001264 3300049587 Bacteria 14339
117 Ga0501071_0001289 3300049587 Bacteria 14262
118 Ga0501071_0015875 3300049587 Bacteria 5171
119 Ga0501071_0199436 3300049587 Unclassified 1503
120 Ga0501072_0002050 3300049588 Bacteria 14984
121 Ga0501072_0018992 3300049588 Bacteria 5307
122 Ga0501072_0113598 3300049588 Bacteria 2156
123 Ga0501072_0293655 3300049588 Bacteria 1292
124 Ga0501073_0006208 3300049589 Bacteria 8916
125 Ga0501074_0215916 3300049590 Bacteria 1366
126 Ga0501075_0003706 3300049591 Bacteria 10261
127 Ga0501075_0006220 3300049591 Bacteria 8208
128 Ga0501075_0127513 3300049591 Bacteria 1938
129 Ga0501076_0003640 3300049592 Bacteria 10830
130 Ga0501076_0023778 3300049592 Bacteria 4727
131 Ga0501076_0138796 3300049592 Bacteria 1974
132 Ga0501077_0001836 3300049593 Bacteria 12847
133 Ga0501077_0299887 3300049593 Bacteria 1024
134 Ga0501079_0002951 3300049741 Bacteria 12431
135 Ga0501079_0006731 3300049741 Bacteria 8647
136 Ga0501079_0318893 3300049741 Bacteria 1217
137 Ga0501080_0026631 3300049742 Bacteria 5372
138 Ga0501080_0193929 3300049742 Bacteria 1866
139 Ga0501080_0225375 3300049742 Bacteria 1714
140 Ga0501080_0253106 3300049742 Bacteria 1606
141 Ga0501081_0001397 3300049743 Bacteria 14726
142 Ga0501081_0026340 3300049743 Bacteria 3920
143 Ga0501081_0590380 3300049743 Bacteria 831
144 Ga0501083_0053057 3300049744 Bacteria 2722
145 Ga0501035_0092311 3300049822 Bacteria 2664
146 Ga0501045_0016964 3300049824 Bacteria 5172
147 Ga0501045_0020677 3300049824 Bacteria 4703
148 Ga0501045_0045528 3300049824 Bacteria 3194
149 nmdc:mga05p37_280723_c1 3300050507 Bacteria 1986
150 nmdc:mga08x19_150255_c1 3300050514 Bacteria 1577
151 Ga0495601_0010483 3300053077 Bacteria 5517
152 Ga0495612_0043226 3300053078 Bacteria 1841
153 Ga0495595_0074060 3300053084 Bacteria 1613
154 Ga0495619_0044516 3300053085 Bacteria 2913
155 Ga0501084_0007168 3300054114 Bacteria 9183
156 Ga0501084_0030540 3300054114 Bacteria 4505
157 Ga0501084_0047754 3300054114 Bacteria 3585
158 Ga0501084_0429438 3300054114 Unclassified 1117
159 Ga0501084_0579340 3300054114 Bacteria 948
160 Ga0501082_0005815 3300060353 Bacteria 10708
161 Ga0501082_0468525 3300060353 Bacteria 1101
162 Ga0530510_0004394 3300061734 Bacteria 9759
163 Ga0530510_0024004 3300061734 Bacteria 4349
164 Ga0530510_0445835 3300061734 Bacteria 978
165 Ga0530510_0646264 3300061734 Unclassified 805
166 nmdc:mga08y16_633743_c1
167 JGI25406J46586_10015771
168 Ga0070680_100004112
169 Ga0070680_100005517
170 Ga0070687_100006473
171 Ga0070692_10234347
172 Ga0070705_100032577
173 Ga0070708_100002184
174 Ga0070708_100006137
175 Ga0070708_100017846
176 Ga0070708_100036709
177 Ga0070708_100070633
178 Ga0070708_100132521
179 Ga0070706_100008770
180 Ga0070706_100018115
181 Ga0070706_100095776
182 Ga0070706_100109597
183 Ga0070706_100118973
184 Ga0070706_100586520
185 Ga0070706_100616375
186 Ga0070707_100001659
187 Ga0070707_100010510
188 Ga0070707_100010870
189 Ga0070707_100043384
190 Ga0070707_100381803
191 Ga0070698_100005376
192 Ga0070698_100020426
193 Ga0070698_100149247
194 Ga0070698_100248007
195 Ga0070699_100019263
196 Ga0070699_100176998
197 Ga0070699_100269421
198 Ga0070697_100396419
199 Ga0070697_100554473
200 Ga0070696_100021538
201 Ga0070696_100106610
202 Ga0070696_100204026
203 Ga0068854_100033594
204 Ga0081539_10002698
205 Ga0070717_10006759
206 Ga0075365_10094681
207 Ga0075428_100497720
208 Ga0075436_100166970
209 Ga0114129_10197392
210 Ga0114129_10907781
211 Ga0105243_10119722
212 Ga0207684_10004086
213 Ga0207684_10009389
214 Ga0207684_10042000
215 Ga0207684_10101674
216 Ga0207684_10264637
217 Ga0207660_10001691
218 Ga0207646_10005013
219 Ga0207646_10029521
220 Ga0207646_10030837
221 Ga0207646_10147987
222 Ga0207646_10371485
223 Ga0209982_1007249
224 Ga0209983_1048615
225 Ga0209971_1016625
226 Ga0209998_10000139
227 Ga0265318_10036520
228 Ga0265336_10079764
229 Ga0265332_10053373
230 Ga0265325_10029481
231 Ga0265340_10043697
232 Ga0265313_10050542
233 Ga0265314_10054260
234 Ga0373955_0144925
235 Ga0373947_0057701
236 Ga0373937_0079212
237 Ga0395900_0023443
238 Ga0395900_0094728
239 Ga0395900_0250977
240 Ga0395898_0095267
241 Ga0395905_0158090
242 Ga0395905_0292207
243 Ga0436364_1534350
244 Ga0395901_0072613
245 Ga0395901_0149616
246 Ga0450920_029343
247 Ga0450910_004513
248 Ga0495618_0043405
249 Ga0495652_0313433
250 Ga0495640_0257238
251 Ga0495600_0134884
252 Ga0496105_0219695
253 Ga0501031_0001818
254 Ga0501033_0115549
255 Ga0501033_0314377
256 Ga0501036_0094973
257 Ga0501036_0102836
258 Ga0501037_0114195
259 Ga0501038_0010770
260 Ga0501039_0003512
261 Ga0501039_0007387
262 Ga0501039_0124522
263 Ga0501040_0039709
264 Ga0501041_0013826
265 Ga0501041_0042130
266 Ga0501042_0008866
267 Ga0501043_0512205
268 Ga0501046_0023440
269 Ga0501046_0036514
270 Ga0501048_0028061
271 Ga0501048_0268890
272 Ga0501048_0308965
273 Ga0501048_0675195
274 Ga0501068_0009037
275 Ga0501068_0012656
276 Ga0501068_0108931
277 Ga0501068_0451867
278 Ga0501069_0143796
279 Ga0501070_0061946
280 Ga0501070_0335044
281 Ga0501071_0001264
282 Ga0501071_0001289
283 Ga0501071_0015875
284 Ga0501071_0199436
285 Ga0501072_0002050
286 Ga0501072_0018992
287 Ga0501072_0113598
288 Ga0501072_0293655
289 Ga0501073_0006208
290 Ga0501074_0215916
291 Ga0501075_0003706
292 Ga0501075_0006220
293 Ga0501075_0127513
294 Ga0501076_0003640
295 Ga0501076_0023778
296 Ga0501076_0138796
297 Ga0501077_0001836
298 Ga0501077_0299887
299 Ga0501079_0002951
300 Ga0501079_0006731
301 Ga0501079_0318893
302 Ga0501080_0026631
303 Ga0501080_0193929
304 Ga0501080_0225375
305 Ga0501080_0253106
306 Ga0501081_0001397
307 Ga0501081_0026340
308 Ga0501081_0590380
309 Ga0501083_0053057
310 Ga0501035_0092311
311 Ga0501045_0016964
312 Ga0501045_0020677
313 Ga0501045_0045528
314 nmdc:mga05p37_280723_c1
315 nmdc:mga08x19_150255_c1
316 Ga0495601_0010483
317 Ga0495612_0043226
318 Ga0495595_0074060
319 Ga0495619_0044516
320 Ga0501084_0007168
321 Ga0501084_0030540
322 Ga0501084_0047754
323 Ga0501084_0429438
324 Ga0501084_0579340
325 Ga0501082_0005815
326 Ga0501082_0468525
327 Ga0530510_0004394
328 Ga0530510_0024004
329 Ga0530510_0445835
330 Ga0530510_0646264

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kwr-assembly1.cif.gz_B crystal structure of putative rna-binding protein (np_785364.1) from lactobacillus plantarum at 1.45 a resolution 0.6914 6 64
3qdk-assembly1.cif.gz_B structural insight on mechanism and diverse substrate selection strategy of ribulokinase 0.6782 3 33
3dka-assembly1.cif.gz_B crystal structure of a dinb-like protein (yjoa, bsu12410) from bacillus subtilis at 2.30 a resolution 0.647 105 223
6g1n-assembly1.cif.gz_D crystal structure of the burkholderia pseudomallei antitoxin hicb 0.6419 4 64
3gor-assembly2.cif.gz_D crystal structure of putative metal-dependent hydrolase apc36150 0.6261 98 224
ID Description Score Start End Superfamily
2dsyD00 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.8514 15 52 3.30.160.250
af_P0ABJ1_113_282_2.60.40.420 Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - 0.7392 4 28 2.60.40.420
af_Q4DSE9_67_279_2.60.40.1730 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.6983 2 17 2.60.40.1730
af_Q19137_112_362_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6725 5 35 2.130.10.10
af_O53773_242_434_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.67 101 224 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A536CB15-F1-model_v4 DinB family protein 0.956 5 222
AF-A0A535RPW8-F1-model_v4 Uncharacterized protein 0.9516 3 111
AF-A0A536HUL4-F1-model_v4 DinB family protein 0.9425 21 222
AF-A0A536CB15-F1-model_v4 DinB family protein 0.9392 5 222
AF-A0A1F8QFC6-F1-model_v4 DinB-like domain-containing protein 0.9292 5 221

Map