F247130
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 165 | 132 | 160 | 101 |
Family's Representative Sequence
| Representative Sequence | 3300049581|Ga0501047_0220533|Ga0501047_0220533_1141_1473 |
| Length | 110 |
| Sequence | MTGTTQTRALVPGEVFADGPDLDLNPGRRRATLVVENTAERPIQVGSHYHFAETNAALRFDRVAARGMRLDIASGTAVRFEPGQQRTVELVEYAGAREVYGFRALVQGKL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2582581865 | Rhizobium sp. CF258 | Isolate | Rhizosphere |
| 2 | 2643221544 | Pelomonas sp. Root1444 | Isolate | Unclassified |
| 3 | 2738543031 | Pleomorphomonas sp. CF100 | Isolate | Unclassified |
| 4 | 2744054611 | Aldersonia kunmingensis DSM 45001 | Isolate | Rhizosphere |
| 5 | 2881101125 | Ramlibacter rhizophilus CCTCC AB2015357 | Isolate | Rhizosphere |
| 6 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 7 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 12 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 15 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 26 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 29 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 33 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 35 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 36 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 37 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 38 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 39 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 40 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 41 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 42 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 43 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 44 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 46 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 47 | 3300006941 | Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW | Metagenome | Nodule |
| 48 | 3300006943 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW | Metagenome | Nodule |
| 49 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 60 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300027357 | Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 88 | 3300027361 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 89 | 3300027363 | Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) | Metagenome | Nodule |
| 90 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 93 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 94 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 95 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 96 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 97 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 98 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 99 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 100 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 101 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 102 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 103 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 104 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 105 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 106 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 107 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 108 | 3300041410 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 | Metagenome | Rhizosphere |
| 109 | 3300041496 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG | Metagenome | Unclassified |
| 110 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 111 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 112 | 3300042436 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 | Metagenome | Rhizosphere |
| 113 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 114 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 115 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 116 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 117 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 121 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 128 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 130 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 131 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 132 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.97 |
| Metatranscriptomes | 0 |
| Isolates | 3.03 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.03 |
| Nodule | 3.03 |
| Rhizoplane | 0.61 |
| Rhizosphere | 90.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.03 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24737J22298_10216649 | 3300001990 | Bacteria | 565 |
| 2 | Ga0070658_10615307 | 3300005327 | Bacteria | 942 |
| 3 | Ga0070676_10147596 | 3300005328 | Bacteria | 1503 |
| 4 | Ga0070670_100082119 | 3300005331 | Bacteria | 2769 |
| 5 | Ga0070670_100204598 | 3300005331 | Bacteria | 1715 |
| 6 | Ga0070677_10231085 | 3300005333 | Bacteria | 908 |
| 7 | Ga0068869_100761920 | 3300005334 | Bacteria | 829 |
| 8 | Ga0070666_10776859 | 3300005335 | Bacteria | 705 |
| 9 | Ga0070660_100037368 | 3300005339 | Bacteria | 3681 |
| 10 | Ga0070660_100581440 | 3300005339 | Bacteria | 936 |
| 11 | Ga0070689_100709797 | 3300005340 | Bacteria | 879 |
| 12 | Ga0070669_100476162 | 3300005353 | Bacteria | 1032 |
| 13 | Ga0070675_100040972 | 3300005354 | Bacteria | 3782 |
| 14 | Ga0070675_100313042 | 3300005354 | Bacteria | 1386 |
| 15 | Ga0070675_101649666 | 3300005354 | Bacteria | 591 |
| 16 | Ga0070674_101512246 | 3300005356 | Bacteria | 603 |
| 17 | Ga0070674_101634266 | 3300005356 | Bacteria | 581 |
| 18 | Ga0070673_100280447 | 3300005364 | Bacteria | 1461 |
| 19 | Ga0070673_100333497 | 3300005364 | Bacteria | 1342 |
| 20 | Ga0070659_100025764 | 3300005366 | Bacteria | 4522 |
| 21 | Ga0070659_100513464 | 3300005366 | Bacteria | 1022 |
| 22 | Ga0070667_101138896 | 3300005367 | Bacteria | 730 |
| 23 | Ga0070709_10391888 | 3300005434 | Bacteria | 1035 |
| 24 | Ga0070663_100239832 | 3300005455 | Bacteria | 1430 |
| 25 | Ga0070663_101504000 | 3300005455 | Bacteria | 598 |
| 26 | Ga0070678_100018295 | 3300005456 | Bacteria | 4540 |
| 27 | Ga0070678_101460580 | 3300005456 | Bacteria | 639 |
| 28 | Ga0070662_100069588 | 3300005457 | Bacteria | 2591 |
| 29 | Ga0068867_100293515 | 3300005459 | Bacteria | 1337 |
| 30 | Ga0070706_100742078 | 3300005467 | Bacteria | 910 |
| 31 | Ga0070698_100803295 | 3300005471 | Bacteria | 885 |
| 32 | Ga0068853_100005761 | 3300005539 | Bacteria | 9755 |
| 33 | Ga0068853_100693957 | 3300005539 | Bacteria | 971 |
| 34 | Ga0070672_100039549 | 3300005543 | Bacteria | 3613 |
| 35 | Ga0070672_100145003 | 3300005543 | Bacteria | 1961 |
| 36 | Ga0070672_100568633 | 3300005543 | Bacteria | 985 |
| 37 | Ga0070695_100670347 | 3300005545 | Bacteria | 821 |
| 38 | Ga0070665_101002071 | 3300005548 | Bacteria | 848 |
| 39 | Ga0068855_100619224 | 3300005563 | Bacteria | 1166 |
| 40 | Ga0070664_101534376 | 3300005564 | Bacteria | 631 |
| 41 | Ga0068857_100161170 | 3300005577 | Bacteria | 2035 |
| 42 | Ga0068854_100079179 | 3300005578 | Bacteria | 2422 |
| 43 | Ga0068856_100367121 | 3300005614 | Bacteria | 1458 |
| 44 | Ga0068852_100017400 | 3300005616 | Bacteria | 5640 |
| 45 | Ga0068852_101087393 | 3300005616 | Bacteria | 820 |
| 46 | Ga0068864_100144216 | 3300005618 | Bacteria | 2151 |
| 47 | Ga0068861_100137311 | 3300005719 | Bacteria | 1991 |
| 48 | Ga0068851_10123119 | 3300005834 | Bacteria | 1395 |
| 49 | Ga0068870_11133719 | 3300005840 | Bacteria | 564 |
| 50 | Ga0068863_100088552 | 3300005841 | Bacteria | 2934 |
| 51 | Ga0068863_100139109 | 3300005841 | Bacteria | 2320 |
| 52 | Ga0068863_100523054 | 3300005841 | Bacteria | 1170 |
| 53 | Ga0068862_101781152 | 3300005844 | Bacteria | 625 |
| 54 | Ga0097621_100250258 | 3300006237 | Bacteria | 1551 |
| 55 | Ga0097621_100765683 | 3300006237 | Bacteria | 892 |
| 56 | Ga0097621_101328568 | 3300006237 | Bacteria | 679 |
| 57 | Ga0068871_102036448 | 3300006358 | Bacteria | 546 |
| 58 | Ga0075430_100794582 | 3300006846 | Bacteria | 780 |
| 59 | Ga0099825_1067418 | 3300006941 | Bacteria | 551 |
| 60 | Ga0099822_1011448 | 3300006943 | Bacteria | 10808 |
| 61 | Ga0114129_11566099 | 3300009147 | Bacteria | 808 |
| 62 | Ga0105241_12644172 | 3300009174 | Bacteria | 505 |
| 63 | Ga0105242_10691189 | 3300009176 | Bacteria | 997 |
| 64 | Ga0105248_10395008 | 3300009177 | Bacteria | 1557 |
| 65 | Ga0105248_11988320 | 3300009177 | Bacteria | 660 |
| 66 | Ga0105249_10046455 | 3300009553 | Bacteria | 3951 |
| 67 | Ga0105249_11453933 | 3300009553 | Bacteria | 757 |
| 68 | Ga0157369_11563905 | 3300013105 | Bacteria | 671 |
| 69 | Ga0157378_10782621 | 3300013297 | Bacteria | 979 |
| 70 | Ga0163162_12866778 | 3300013306 | Bacteria | 555 |
| 71 | Ga0163163_10313729 | 3300014325 | Bacteria | 1621 |
| 72 | Ga0163163_11651943 | 3300014325 | Bacteria | 701 |
| 73 | Ga0157376_12375578 | 3300014969 | Bacteria | 570 |
| 74 | Ga0213872_10086069 | 3300021361 | Bacteria | 1409 |
| 75 | Ga0207656_10181379 | 3300025321 | Bacteria | 1011 |
| 76 | Ga0207682_10002043 | 3300025893 | Bacteria | 9135 |
| 77 | Ga0207699_10575228 | 3300025906 | Bacteria | 819 |
| 78 | Ga0207645_10668798 | 3300025907 | Bacteria | 706 |
| 79 | Ga0207705_10077031 | 3300025909 | Bacteria | 2425 |
| 80 | Ga0207684_10118158 | 3300025910 | Bacteria | 2272 |
| 81 | Ga0207657_10077250 | 3300025919 | Bacteria | 2807 |
| 82 | Ga0207650_10021208 | 3300025925 | Bacteria | 4593 |
| 83 | Ga0207650_10083600 | 3300025925 | Bacteria | 2425 |
| 84 | Ga0207650_10126209 | 3300025925 | Bacteria | 1998 |
| 85 | Ga0207644_10008341 | 3300025931 | Bacteria | 6789 |
| 86 | Ga0207690_10004649 | 3300025932 | Bacteria | 8119 |
| 87 | Ga0207706_10037950 | 3300025933 | Bacteria | 4275 |
| 88 | Ga0207709_10140058 | 3300025935 | Bacteria | 1661 |
| 89 | Ga0207669_10583397 | 3300025937 | Bacteria | 906 |
| 90 | Ga0207669_10609120 | 3300025937 | Bacteria | 888 |
| 91 | Ga0207691_10637329 | 3300025940 | Bacteria | 901 |
| 92 | Ga0207689_10585119 | 3300025942 | Bacteria | 938 |
| 93 | Ga0207651_10260101 | 3300025960 | Bacteria | 1424 |
| 94 | Ga0207651_10729865 | 3300025960 | Bacteria | 874 |
| 95 | Ga0207640_10384053 | 3300025981 | Bacteria | 1139 |
| 96 | Ga0207677_10684964 | 3300026023 | Bacteria | 908 |
| 97 | Ga0207639_10219157 | 3300026041 | Bacteria | 1642 |
| 98 | Ga0207639_11333141 | 3300026041 | Bacteria | 673 |
| 99 | Ga0207678_10336753 | 3300026067 | Bacteria | 1300 |
| 100 | Ga0207702_10506025 | 3300026078 | Bacteria | 1178 |
| 101 | Ga0207641_10033044 | 3300026088 | Bacteria | 4298 |
| 102 | Ga0207641_10500204 | 3300026088 | Bacteria | 1180 |
| 103 | Ga0207641_11196646 | 3300026088 | Bacteria | 759 |
| 104 | Ga0207676_10068313 | 3300026095 | Bacteria | 2842 |
| 105 | Ga0207676_11288232 | 3300026095 | Bacteria | 725 |
| 106 | Ga0207676_11323861 | 3300026095 | Bacteria | 715 |
| 107 | Ga0207674_10106216 | 3300026116 | Bacteria | 2785 |
| 108 | Ga0207675_100407275 | 3300026118 | Bacteria | 1341 |
| 109 | Ga0207683_11004660 | 3300026121 | Bacteria | 774 |
| 110 | Ga0207683_11849562 | 3300026121 | Bacteria | 553 |
| 111 | Ga0207698_10164934 | 3300026142 | Bacteria | 1943 |
| 112 | Ga0209589_1000055 | 3300027357 | Bacteria | 111890 |
| 113 | Ga0209489_100128 | 3300027361 | Bacteria | 111890 |
| 114 | Ga0209700_100137 | 3300027363 | Bacteria | 111890 |
| 115 | Ga0268266_12242419 | 3300028379 | Bacteria | 518 |
| 116 | Ga0268264_10032724 | 3300028381 | Bacteria | 4267 |
| 117 | Ga0265328_10259871 | 3300031239 | Bacteria | 666 |
| 118 | Ga0265339_10057682 | 3300031249 | Bacteria | 2099 |
| 119 | Ga0265331_10237931 | 3300031250 | Bacteria | 817 |
| 120 | Ga0307408_100579193 | 3300031548 | Bacteria | 994 |
| 121 | Ga0265314_10018980 | 3300031711 | Bacteria | 5336 |
| 122 | Ga0265342_10051844 | 3300031712 | Bacteria | 2447 |
| 123 | Ga0307405_10024824 | 3300031731 | Bacteria | 3431 |
| 124 | Ga0307413_10892668 | 3300031824 | Bacteria | 754 |
| 125 | Ga0307410_11718247 | 3300031852 | Bacteria | 556 |
| 126 | Ga0307406_10207862 | 3300031901 | Bacteria | 1446 |
| 127 | Ga0307412_10820315 | 3300031911 | Bacteria | 809 |
| 128 | Ga0307412_10986437 | 3300031911 | Bacteria | 743 |
| 129 | Ga0307416_100383408 | 3300032002 | Bacteria | 1437 |
| 130 | Ga0307414_11792625 | 3300032004 | Bacteria | 573 |
| 131 | Ga0373943_0952822 | 3300035170 | Bacteria | 514 |
| 132 | Ga0436365_0083099 | 3300039437 | Bacteria | 916 |
| 133 | Ga0436361_0136280 | 3300039447 | Bacteria | 663 |
| 134 | Ga0436361_0521381 | 3300039447 | Bacteria | 1898 |
| 135 | Ga0439461_0029067 | 3300041410 | Bacteria | 1142 |
| 136 | Ga0451839_0699108 | 3300041496 | Bacteria | 575 |
| 137 | Ga0451853_4095667 | 3300041512 | Bacteria | 1123 |
| 138 | Ga0450898_075765 | 3300042134 | Bacteria | 679 |
| 139 | Ga0439435_0344331 | 3300042436 | Bacteria | 517 |
| 140 | Ga0451577_0502288 | 3300042876 | Bacteria | 1101 |
| 141 | Ga0466966_0335685 | 3300044684 | Bacteria | 908 |
| 142 | Ga0466963_0232021 | 3300044694 | Bacteria | 1293 |
| 143 | Ga0451576_0773316 | 3300045051 | Bacteria | 1008 |
| 144 | Ga0451576_2646129 | 3300045051 | Bacteria | 511 |
| 145 | Ga0495592_0658610 | 3300046454 | Bacteria | 633 |
| 146 | Ga0495621_0073642 | 3300046539 | Bacteria | 1262 |
| 147 | Ga0495625_0143115 | 3300046660 | Bacteria | 1612 |
| 148 | Ga0496109_0619279 | 3300048912 | Bacteria | 1019 |
| 149 | Ga0501031_0246038 | 3300049568 | Bacteria | 1162 |
| 150 | Ga0501032_0927129 | 3300049569 | Bacteria | 548 |
| 151 | Ga0501036_0150265 | 3300049572 | Bacteria | 1965 |
| 152 | Ga0501039_0375817 | 3300049575 | Bacteria | 1116 |
| 153 | Ga0501047_0220533 | 3300049581 | Bacteria | 1753 |
| 154 | Ga0501076_0198045 | 3300049592 | Bacteria | 1640 |
| 155 | nmdc:mga0k408_869848_c1 | 3300050493 | Bacteria | 523 |
| 156 | nmdc:mga0a205_1305227_c1 | 3300050515 | Bacteria | 573 |
| 157 | Ga0500595_066612 | 3300053119 | Bacteria | 1076 |
| 158 | Ga0500614_198871 | 3300053123 | Bacteria | 617 |
| 159 | Ga0500590_034573 | 3300053148 | Bacteria | 2616 |
| 160 | Ga0500634_0134360 | 3300053161 | Bacteria | 1182 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013297 | Ga0157378_10782621 | Ga0157378_107826212 | 88 |
| 2 | 3300046539 | Ga0495621_0073642 | Ga0495621_0073642_656_961 | 88 |
| 3 | 3300042436 | Ga0439435_0344331 | Ga0439435_0344331_148_417 | 89 |
| 4 | 3300049568 | Ga0501031_0246038 | Ga0501031_0246038_66_335 | 89 |
| 5 | 3300049569 | Ga0501032_0927129 | Ga0501032_0927129_203_472 | 89 |
| 6 | 3300053161 | Ga0500634_0134360 | Ga0500634_0134360_455_730 | 90 |
| 7 | 3300039437 | Ga0436365_0083099 | Ga0436365_0083099_597_902 | 91 |
| 8 | 3300005616 | Ga0068852_100017400 | Ga0068852_1000174005 | 93 |
| 9 | 3300026078 | Ga0207702_10506025 | Ga0207702_105060252 | 93 |
| 10 | 3300026142 | Ga0207698_10164934 | Ga0207698_101649343 | 93 |
| 11 | 3300005471 | Ga0070698_100803295 | Ga0070698_1008032951 | 97 |
| 12 | iso_pu_bacteria | 2582581865 | 2585390014 | 97 |
| 13 | iso_pu_bacteria | 2643221544 | 2643742418 | 97 |
| 14 | iso_pu_bacteria | 2738543031 | 2739349263 | 97 |
| 15 | iso_pu_bacteria | 2881101125 | 2881102730 | 97 |
| 16 | iso_pu_bacteria | 2744054611 | 2744953658 | 98 |
| 17 | 3300005327 | Ga0070658_10615307 | Ga0070658_106153072 | 101 |
| 18 | 3300005328 | Ga0070676_10147596 | Ga0070676_101475964 | 101 |
| 19 | 3300005331 | Ga0070670_100082119 | Ga0070670_1000821195 | 101 |
| 20 | 3300005331 | Ga0070670_100204598 | Ga0070670_1002045982 | 101 |
| 21 | 3300005333 | Ga0070677_10231085 | Ga0070677_102310853 | 101 |
| 22 | 3300005334 | Ga0068869_100761920 | Ga0068869_1007619202 | 101 |
| 23 | 3300005335 | Ga0070666_10776859 | Ga0070666_107768592 | 101 |
| 24 | 3300005339 | Ga0070660_100037368 | Ga0070660_1000373682 | 101 |
| 25 | 3300005339 | Ga0070660_100581440 | Ga0070660_1005814402 | 101 |
| 26 | 3300005340 | Ga0070689_100709797 | Ga0070689_1007097971 | 101 |
| 27 | 3300005353 | Ga0070669_100476162 | Ga0070669_1004761621 | 101 |
| 28 | 3300005354 | Ga0070675_100040972 | Ga0070675_1000409725 | 101 |
| 29 | 3300005354 | Ga0070675_100313042 | Ga0070675_1003130422 | 101 |
| 30 | 3300005354 | Ga0070675_101649666 | Ga0070675_1016496662 | 101 |
| 31 | 3300005356 | Ga0070674_101512246 | Ga0070674_1015122462 | 101 |
| 32 | 3300005356 | Ga0070674_101634266 | Ga0070674_1016342662 | 101 |
| 33 | 3300005364 | Ga0070673_100280447 | Ga0070673_1002804472 | 101 |
| 34 | 3300005364 | Ga0070673_100333497 | Ga0070673_1003334972 | 101 |
| 35 | 3300005366 | Ga0070659_100025764 | Ga0070659_1000257643 | 101 |
| 36 | 3300005366 | Ga0070659_100513464 | Ga0070659_1005134642 | 101 |
| 37 | 3300005367 | Ga0070667_101138896 | Ga0070667_1011388962 | 101 |
| 38 | 3300005455 | Ga0070663_100239832 | Ga0070663_1002398321 | 101 |
| 39 | 3300005455 | Ga0070663_101504000 | Ga0070663_1015040002 | 101 |
| 40 | 3300005456 | Ga0070678_100018295 | Ga0070678_1000182957 | 101 |
| 41 | 3300005456 | Ga0070678_101460580 | Ga0070678_1014605801 | 101 |
| 42 | 3300005459 | Ga0068867_100293515 | Ga0068867_1002935153 | 101 |
| 43 | 3300005467 | Ga0070706_100742078 | Ga0070706_1007420783 | 101 |
| 44 | 3300005539 | Ga0068853_100693957 | Ga0068853_1006939572 | 101 |
| 45 | 3300005543 | Ga0070672_100039549 | Ga0070672_1000395497 | 101 |
| 46 | 3300005543 | Ga0070672_100145003 | Ga0070672_1001450034 | 101 |
| 47 | 3300005543 | Ga0070672_100568633 | Ga0070672_1005686333 | 101 |
| 48 | 3300005548 | Ga0070665_101002071 | Ga0070665_1010020711 | 101 |
| 49 | 3300005563 | Ga0068855_100619224 | Ga0068855_1006192242 | 101 |
| 50 | 3300005564 | Ga0070664_101534376 | Ga0070664_1015343762 | 101 |
| 51 | 3300005616 | Ga0068852_101087393 | Ga0068852_1010873932 | 101 |
| 52 | 3300005618 | Ga0068864_100144216 | Ga0068864_1001442162 | 101 |
| 53 | 3300005719 | Ga0068861_100137311 | Ga0068861_1001373112 | 101 |
| 54 | 3300005834 | Ga0068851_10123119 | Ga0068851_101231193 | 101 |
| 55 | 3300005840 | Ga0068870_11133719 | Ga0068870_111337192 | 101 |
| 56 | 3300005841 | Ga0068863_100088552 | Ga0068863_1000885524 | 101 |
| 57 | 3300005841 | Ga0068863_100139109 | Ga0068863_1001391094 | 101 |
| 58 | 3300005841 | Ga0068863_100523054 | Ga0068863_1005230542 | 101 |
| 59 | 3300005844 | Ga0068862_101781152 | Ga0068862_1017811521 | 101 |
| 60 | 3300006237 | Ga0097621_100250258 | Ga0097621_1002502582 | 101 |
| 61 | 3300006237 | Ga0097621_100765683 | Ga0097621_1007656832 | 101 |
| 62 | 3300006237 | Ga0097621_101328568 | Ga0097621_1013285682 | 101 |
| 63 | 3300006358 | Ga0068871_102036448 | Ga0068871_1020364482 | 101 |
| 64 | 3300006941 | Ga0099825_1067418 | Ga0099825_10674181 | 101 |
| 65 | 3300006943 | Ga0099822_1011448 | Ga0099822_10114488 | 101 |
| 66 | 3300009176 | Ga0105242_10691189 | Ga0105242_106911893 | 101 |
| 67 | 3300009177 | Ga0105248_10395008 | Ga0105248_103950084 | 101 |
| 68 | 3300009177 | Ga0105248_11988320 | Ga0105248_119883202 | 101 |
| 69 | 3300009553 | Ga0105249_10046455 | Ga0105249_100464556 | 101 |
| 70 | 3300009553 | Ga0105249_11453933 | Ga0105249_114539331 | 101 |
| 71 | 3300013105 | Ga0157369_11563905 | Ga0157369_115639052 | 101 |
| 72 | 3300013306 | Ga0163162_12866778 | Ga0163162_128667782 | 101 |
| 73 | 3300014325 | Ga0163163_10313729 | Ga0163163_103137292 | 101 |
| 74 | 3300014325 | Ga0163163_11651943 | Ga0163163_116519432 | 101 |
| 75 | 3300014969 | Ga0157376_12375578 | Ga0157376_123755782 | 101 |
| 76 | 3300025321 | Ga0207656_10181379 | Ga0207656_101813793 | 101 |
| 77 | 3300025893 | Ga0207682_10002043 | Ga0207682_100020432 | 101 |
| 78 | 3300025907 | Ga0207645_10668798 | Ga0207645_106687982 | 101 |
| 79 | 3300025909 | Ga0207705_10077031 | Ga0207705_100770313 | 101 |
| 80 | 3300025910 | Ga0207684_10118158 | Ga0207684_101181582 | 101 |
| 81 | 3300025919 | Ga0207657_10077250 | Ga0207657_100772504 | 101 |
| 82 | 3300025925 | Ga0207650_10021208 | Ga0207650_100212082 | 101 |
| 83 | 3300025925 | Ga0207650_10083600 | Ga0207650_100836002 | 101 |
| 84 | 3300025925 | Ga0207650_10126209 | Ga0207650_101262092 | 101 |
| 85 | 3300025931 | Ga0207644_10008341 | Ga0207644_100083414 | 101 |
| 86 | 3300025932 | Ga0207690_10004649 | Ga0207690_100046493 | 101 |
| 87 | 3300025935 | Ga0207709_10140058 | Ga0207709_101400582 | 101 |
| 88 | 3300025937 | Ga0207669_10583397 | Ga0207669_105833972 | 101 |
| 89 | 3300025937 | Ga0207669_10609120 | Ga0207669_106091203 | 101 |
| 90 | 3300025940 | Ga0207691_10637329 | Ga0207691_106373292 | 101 |
| 91 | 3300025942 | Ga0207689_10585119 | Ga0207689_105851192 | 101 |
| 92 | 3300025960 | Ga0207651_10260101 | Ga0207651_102601012 | 101 |
| 93 | 3300025960 | Ga0207651_10729865 | Ga0207651_107298652 | 101 |
| 94 | 3300026023 | Ga0207677_10684964 | Ga0207677_106849643 | 101 |
| 95 | 3300026041 | Ga0207639_11333141 | Ga0207639_113331411 | 101 |
| 96 | 3300026067 | Ga0207678_10336753 | Ga0207678_103367533 | 101 |
| 97 | 3300026088 | Ga0207641_10033044 | Ga0207641_100330442 | 101 |
| 98 | 3300026088 | Ga0207641_10500204 | Ga0207641_105002042 | 101 |
| 99 | 3300026088 | Ga0207641_11196646 | Ga0207641_111966462 | 101 |
| 100 | 3300026095 | Ga0207676_10068313 | Ga0207676_100683134 | 101 |
| 101 | 3300026095 | Ga0207676_11288232 | Ga0207676_112882322 | 101 |
| 102 | 3300026095 | Ga0207676_11323861 | Ga0207676_113238611 | 101 |
| 103 | 3300026118 | Ga0207675_100407275 | Ga0207675_1004072752 | 101 |
| 104 | 3300026121 | Ga0207683_11004660 | Ga0207683_110046602 | 101 |
| 105 | 3300026121 | Ga0207683_11849562 | Ga0207683_118495622 | 101 |
| 106 | 3300027357 | Ga0209589_1000055 | Ga0209589_100005597 | 101 |
| 107 | 3300027361 | Ga0209489_100128 | Ga0209489_10012897 | 101 |
| 108 | 3300027363 | Ga0209700_100137 | Ga0209700_10013797 | 101 |
| 109 | 3300028379 | Ga0268266_12242419 | Ga0268266_122424192 | 101 |
| 110 | 3300028381 | Ga0268264_10032724 | Ga0268264_100327244 | 101 |
| 111 | 3300031249 | Ga0265339_10057682 | Ga0265339_100576824 | 101 |
| 112 | 3300031711 | Ga0265314_10018980 | Ga0265314_100189806 | 101 |
| 113 | 3300031824 | Ga0307413_10892668 | Ga0307413_108926682 | 101 |
| 114 | 3300031852 | Ga0307410_11718247 | Ga0307410_117182471 | 101 |
| 115 | 3300031911 | Ga0307412_10820315 | Ga0307412_108203152 | 101 |
| 116 | 3300035170 | Ga0373943_0952822 | Ga0373943_0952822_188_493 | 101 |
| 117 | 3300039447 | Ga0436361_0136280 | Ga0436361_0136280_88_393 | 101 |
| 118 | 3300041410 | Ga0439461_0029067 | Ga0439461_0029067_246_554 | 101 |
| 119 | 3300041496 | Ga0451839_0699108 | Ga0451839_0699108_219_524 | 101 |
| 120 | 3300041512 | Ga0451853_4095667 | Ga0451853_4095667_699_1004 | 101 |
| 121 | 3300042134 | Ga0450898_075765 | Ga0450898_075765_44_349 | 101 |
| 122 | 3300042876 | Ga0451577_0502288 | Ga0451577_0502288_628_933 | 101 |
| 123 | 3300044684 | Ga0466966_0335685 | Ga0466966_0335685_513_818 | 101 |
| 124 | 3300044694 | Ga0466963_0232021 | Ga0466963_0232021_667_984 | 101 |
| 125 | 3300045051 | Ga0451576_0773316 | Ga0451576_0773316_557_862 | 101 |
| 126 | 3300046454 | Ga0495592_0658610 | Ga0495592_0658610_57_362 | 101 |
| 127 | 3300046660 | Ga0495625_0143115 | Ga0495625_0143115_953_1258 | 101 |
| 128 | 3300048912 | Ga0496109_0619279 | Ga0496109_0619279_104_409 | 101 |
| 129 | 3300049572 | Ga0501036_0150265 | Ga0501036_0150265_985_1296 | 101 |
| 130 | 3300049575 | Ga0501039_0375817 | Ga0501039_0375817_300_611 | 101 |
| 131 | 3300049581 | Ga0501047_0220533 | Ga0501047_0220533_1141_1473 | 101 |
| 132 | 3300049592 | Ga0501076_0198045 | Ga0501076_0198045_691_1002 | 101 |
| 133 | 3300050493 | nmdc:mga0k408_869848_c1 | nmdc:mga0k408_869848_c1_106_453 | 101 |
| 134 | 3300050515 | nmdc:mga0a205_1305227_c1 | nmdc:mga0a205_1305227_c1_101_406 | 101 |
| 135 | 3300053148 | Ga0500590_034573 | Ga0500590_034573_964_1269 | 101 |
| 136 | 3300001990 | JGI24737J22298_10216649 | JGI24737J22298_102166491 | 102 |
| 137 | 3300005434 | Ga0070709_10391888 | Ga0070709_103918882 | 102 |
| 138 | 3300005457 | Ga0070662_100069588 | Ga0070662_1000695883 | 102 |
| 139 | 3300005539 | Ga0068853_100005761 | Ga0068853_1000057619 | 102 |
| 140 | 3300005545 | Ga0070695_100670347 | Ga0070695_1006703472 | 102 |
| 141 | 3300005577 | Ga0068857_100161170 | Ga0068857_1001611703 | 102 |
| 142 | 3300005578 | Ga0068854_100079179 | Ga0068854_1000791793 | 102 |
| 143 | 3300005614 | Ga0068856_100367121 | Ga0068856_1003671212 | 102 |
| 144 | 3300006846 | Ga0075430_100794582 | Ga0075430_1007945822 | 102 |
| 145 | 3300009147 | Ga0114129_11566099 | Ga0114129_115660991 | 102 |
| 146 | 3300009174 | Ga0105241_12644172 | Ga0105241_126441721 | 102 |
| 147 | 3300021361 | Ga0213872_10086069 | Ga0213872_100860692 | 102 |
| 148 | 3300025906 | Ga0207699_10575228 | Ga0207699_105752282 | 102 |
| 149 | 3300025933 | Ga0207706_10037950 | Ga0207706_100379504 | 102 |
| 150 | 3300025981 | Ga0207640_10384053 | Ga0207640_103840532 | 102 |
| 151 | 3300026041 | Ga0207639_10219157 | Ga0207639_102191572 | 102 |
| 152 | 3300026116 | Ga0207674_10106216 | Ga0207674_101062162 | 102 |
| 153 | 3300031239 | Ga0265328_10259871 | Ga0265328_102598712 | 102 |
| 154 | 3300031250 | Ga0265331_10237931 | Ga0265331_102379312 | 102 |
| 155 | 3300031548 | Ga0307408_100579193 | Ga0307408_1005791932 | 102 |
| 156 | 3300031712 | Ga0265342_10051844 | Ga0265342_100518443 | 102 |
| 157 | 3300031731 | Ga0307405_10024824 | Ga0307405_100248243 | 102 |
| 158 | 3300031901 | Ga0307406_10207862 | Ga0307406_102078623 | 102 |
| 159 | 3300031911 | Ga0307412_10986437 | Ga0307412_109864372 | 102 |
| 160 | 3300032002 | Ga0307416_100383408 | Ga0307416_1003834082 | 102 |
| 161 | 3300032004 | Ga0307414_11792625 | Ga0307414_117926251 | 102 |
| 162 | 3300039447 | Ga0436361_0521381 | Ga0436361_0521381_834_1142 | 102 |
| 163 | 3300045051 | Ga0451576_2646129 | Ga0451576_2646129_177_485 | 102 |
| 164 | 3300053119 | Ga0500595_066612 | Ga0500595_066612_175_483 | 102 |
| 165 | 3300053123 | Ga0500614_198871 | Ga0500614_198871_144_461 | 102 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4gy7-assembly1.cif.gz_A | crystallographic structure analysis of urease from jack bean (canavalia ensiformis) at 1.49 a resolution | 0.9412 | 13 | 102 |
| 7kns-assembly1.cif.gz_F | cryo-em structure of jack bean urease | 0.9401 | 13 | 102 |
| 4goa-assembly1.cif.gz_A | crystal structure of jack bean urease inhibited with fluoride | 0.9397 | 15 | 102 |
| 4g7e-assembly1.cif.gz_B-3 | crystal structure of pigeon pea urease | 0.9385 | 13 | 102 |
| 4g7e-assembly1.cif.gz_A | crystal structure of pigeon pea urease | 0.9372 | 13 | 102 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3la4A03 | Mainly Beta;Ribbon;Urease, subunit B;Urease, beta subunit | 0.9511 | 21 | 102 | 2.10.150.10 |
| 3qgaA02 | Mainly Beta;Ribbon;Urease, subunit B;Urease, beta subunit | 0.8759 | 1 | 102 | 2.10.150.10 |
| 1a5kB00 | Mainly Beta;Ribbon;Urease, subunit B;Urease, beta subunit | 0.8684 | 1 | 99 | 2.10.150.10 |
| 3qgaA02 | Mainly Beta;Ribbon;Urease, subunit B;Urease, beta subunit | 0.8679 | 1 | 102 | 2.10.150.10 |
| 1s3tB00 | Mainly Beta;Ribbon;Urease, subunit B;Urease, beta subunit | 0.8664 | 1 | 101 | 2.10.150.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3C0N2Z2-F1-model_v4 | Urease subunit beta | 1.015 | 27 | 77 |
GO:0009039
GO:0035550 GO:0043419 |
| AF-A0A0F7GA08-F1-model_v4 | Urease B (EC 3.5.1.5) | 0.9926 | 18 | 82 |
GO:0009039
GO:0035550 GO:0043419 |
| AF-A0A0K6FSH9-F1-model_v4 | urease (EC 3.5.1.5) | 0.9894 | 13 | 83 |
GO:0009039
GO:0016151 GO:0035550 GO:0043419 |
| AF-A0A821ZK10-F1-model_v4 | Urease | 0.9851 | 30 | 88 |
GO:0016787
GO:0035550 GO:0043419 |
| AF-A0A0C9TB35-F1-model_v4 | Urease alpha-subunit N-terminal domain-containing protein | 0.9769 | 13 | 86 |
GO:0009039
GO:0016151 GO:0035550 GO:0043419 |
Predicted Structure (AlphaFold2)
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