F247086

General Info

Members Datasets Scaffolds Average Seq Length
165 107 136 291

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0013185|Ga0501033_0013185_4776_5699
Length 307
Sequence MAGRARREVFGVTTRIFLLGAGYSARAFAALQRDRDDAIFGTTRSAEKLDALRKDGIEPLLFDGDTINADMAEALRKTTHLVLSAAPETGALSAGGDPFLPHIEDRLRHLMPELRWIGYLSTVGVYGDHGGAWVDEESECRPVSRRSIARLAAERAWQALAEKERLPLAILRLAGIYGPGRNALVNLAAGTARRIVKHGQVFNRIHVDDIAGALSLLAEREAGGIFNLADNAPSPPQDVIAFAARLMGVEPPPETPFDAAEMTPMARSFYGENKRVSNARLRDAGYSLIHPDYSSALTRMWRENSWR

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
3 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
4 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
5 2643221733 Bosea sp. Root381 Isolate Unclassified
6 2643221734 Bosea sp. Root670 Isolate Unclassified
7 2643221736 Bosea sp. Root483D1 Isolate Unclassified
8 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
9 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
10 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
11 2773857925 Microvirga vignae BR3299 Isolate Unclassified
12 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
13 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
14 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
15 2818991467 Bosea vestrisii 3192 Isolate Unclassified
16 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
17 2841760612 Bosea sp. Tri-49 Isolate Nodule
18 2844104063 Bosea sp. Tri-39 Isolate Nodule
19 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
20 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
21 2851182111 Bosea sp. Tri-44 Isolate Nodule
22 2851246043 Bosea sp. Tri-54 Isolate Nodule
23 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
24 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
25 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
26 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
27 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
28 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
31 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
32 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
36 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
37 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
38 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
41 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
43 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
47 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
50 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
51 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
52 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
62 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
63 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
68 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
69 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
70 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
71 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
72 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
73 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
74 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
75 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
87 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
88 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
92 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
93 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
94 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
100 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
101 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
102 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
103 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
106 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
107 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.42
Metatranscriptomes 0
Isolates 17.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.15
Nodule 13.94
Rhizoplane 0.61
Rhizosphere 57.58
Stem 0
Stem Tuber 0
Unclassified 12.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000188 3300003187 Bacteria 76686
2 Ga0055526_1001324 3300003771 Bacteria 17726
3 Ga0055526_1001443 3300003771 Bacteria 16900
4 Ga0055524_1000989 3300003775 Bacteria 17732
5 Ga0055524_1009609 3300003775 Bacteria 3914
6 Ga0065165_1000150 3300005262 Bacteria 121992
7 Ga0065165_1002307 3300005262 Bacteria 16709
8 Ga0068869_100184812 3300005334 Bacteria 1636
9 Ga0070663_100318100 3300005455 Bacteria 1251
10 Ga0070665_100108538 3300005548 Bacteria 2778
11 Ga0099825_1025744 3300006941 Bacteria 3231
12 Ga0099824_1017411 3300006942 Bacteria 6229
13 Ga0099822_1004073 3300006943 Bacteria 18929
14 Ga0079104_1000033 3300006946 Bacteria 202636
15 Ga0157380_10119916 3300014326 Bacteria 2226
16 Ga0214542_1017378 3300021321 Bacteria 6522
17 Ga0209673_1021273 3300025273 Bacteria 2274
18 Ga0209130_1000187 3300025284 Bacteria 87082
19 Ga0209130_1010496 3300025284 Bacteria 2546
20 Ga0209675_1002417 3300025291 Bacteria 9632
21 Ga0209025_1000187 3300025294 Bacteria 154788
22 Ga0209025_1001133 3300025294 Bacteria 38135
23 Ga0209025_1019946 3300025294 Bacteria 3697
24 Ga0209564_1000052 3300025295 Bacteria 356578
25 Ga0209564_1000632 3300025295 Bacteria 53684
26 Ga0209758_1004699 3300025297 Bacteria 11153
27 Ga0209256_1000099 3300025299 Bacteria 203782
28 Ga0209256_1000240 3300025299 Bacteria 97229
29 Ga0207678_10148135 3300026067 Bacteria 2003
30 Ga0209281_1000043 3300027111 Bacteria 341543
31 Ga0209589_1000006 3300027357 Bacteria 436292
32 Ga0209489_100007 3300027361 Bacteria 436292
33 Ga0209700_100008 3300027363 Bacteria 436292
34 Ga0307408_100277537 3300031548 Bacteria 1394
35 Ga0307408_100507150 3300031548 Bacteria 1057
36 Ga0307410_10027354 3300031852 Bacteria 3604
37 Ga0307406_10275544 3300031901 Bacteria 1280
38 Ga0307406_10459398 3300031901 Bacteria 1023
39 Ga0307416_100533042 3300032002 Bacteria 1244
40 Ga0307414_10211565 3300032004 Bacteria 1585
41 Ga0307411_10064507 3300032005 Bacteria 2453
42 Ga0307411_10152145 3300032005 Bacteria 1721
43 Ga0307415_100026382 3300032126 Bacteria 3664
44 Ga0395901_0038177 3300038443 Bacteria 4968
45 Ga0436363_0098989 3300039450 Bacteria 2303
46 Ga0439462_0034823 3300042015 Bacteria 1337
47 Ga0466966_0046663 3300044684 Bacteria 2765
48 Ga0466971_0021810 3300044719 Bacteria 2851
49 Ga0466957_0185174 3300044842 Bacteria 1361
50 Ga0466959_0079826 3300045049 Bacteria 2359
51 Ga0495660_0122777 3300046810 Bacteria 1312
52 Ga0496101_0146444 3300048904 Bacteria 1804
53 Ga0496117_0050003 3300048920 Bacteria 2967
54 Ga0496117_0065468 3300048920 Bacteria 2471
55 Ga0496118_0083991 3300048921 Bacteria 2224
56 Ga0496122_0000018 3300048925 Bacteria 426350
57 Ga0496122_0020850 3300048925 Bacteria 5895
58 Ga0496122_0174681 3300048925 Bacteria 1289
59 Ga0496123_0000015 3300048926 Bacteria 426088
60 Ga0496124_0161698 3300048927 Bacteria 1744
61 Ga0496126_0395651 3300048929 Bacteria 1122
62 Ga0501031_0000243 3300049568 Bacteria 30699
63 Ga0501031_0025183 3300049568 Bacteria 3880
64 Ga0501031_0074382 3300049568 Bacteria 2212
65 Ga0501032_0002337 3300049569 Bacteria 14871
66 Ga0501033_0004831 3300049570 Bacteria 10754
67 Ga0501033_0013185 3300049570 Bacteria 6297
68 Ga0501033_0091858 3300049570 Bacteria 2220
69 Ga0501033_0119843 3300049570 Bacteria 1910
70 Ga0501033_0218281 3300049570 Bacteria 1358
71 Ga0501034_0002538 3300049571 Bacteria 21830
72 Ga0501034_0033827 3300049571 Bacteria 5181
73 Ga0501034_0056140 3300049571 Bacteria 3963
74 Ga0501034_0249510 3300049571 Bacteria 1719
75 Ga0501034_0260392 3300049571 Bacteria 1677
76 Ga0501034_0339518 3300049571 Bacteria 1432
77 Ga0501037_0000236 3300049573 Bacteria 47586
78 Ga0501037_0014542 3300049573 Bacteria 5790
79 Ga0501037_0024883 3300049573 Bacteria 4425
80 Ga0501037_0166913 3300049573 Bacteria 1567
81 Ga0501037_0179675 3300049573 Bacteria 1502
82 Ga0501038_0101824 3300049574 Bacteria 2391
83 Ga0501039_0061573 3300049575 Bacteria 2907
84 Ga0501040_0022855 3300049576 Bacteria 4189
85 Ga0501042_0002746 3300049578 Bacteria 10858
86 Ga0501043_0000065 3300049579 Bacteria 93521
87 Ga0501043_0011089 3300049579 Bacteria 7058
88 Ga0501043_0167855 3300049579 Bacteria 1713
89 Ga0501047_0024316 3300049581 Bacteria 5815
90 Ga0501047_0030704 3300049581 Bacteria 5179
91 Ga0501047_0053804 3300049581 Bacteria 3894
92 Ga0501067_0001388 3300049583 Bacteria 13142
93 Ga0501067_0033788 3300049583 Bacteria 2837
94 Ga0501068_0015856 3300049584 Bacteria 4338
95 Ga0501069_0000002 3300049585 Bacteria 269636
96 Ga0501069_0010934 3300049585 Bacteria 4810
97 Ga0501070_0000339 3300049586 Bacteria 42523
98 Ga0501070_0002288 3300049586 Bacteria 16831
99 Ga0501070_0008282 3300049586 Bacteria 8788
100 Ga0501071_0038302 3300049587 Bacteria 3426
101 Ga0501073_0038541 3300049589 Bacteria 3389
102 Ga0501074_0000009 3300049590 Bacteria 100578
103 Ga0501074_0011611 3300049590 Bacteria 6403
104 Ga0501074_0030437 3300049590 Bacteria 3912
105 Ga0501074_0130173 3300049590 Bacteria 1800
106 Ga0501076_0168132 3300049592 Bacteria 1787
107 Ga0501077_0022693 3300049593 Bacteria 3977
108 Ga0501080_0000617 3300049742 Bacteria 28211
109 Ga0501080_0010903 3300049742 Bacteria 8316
110 Ga0501083_0000522 3300049744 Bacteria 24553
111 Ga0501083_0402646 3300049744 Bacteria 890
112 Ga0501035_0000124 3300049822 Bacteria 93561
113 Ga0501035_0004856 3300049822 Bacteria 12747
114 Ga0501035_0005548 3300049822 Bacteria 11918
115 Ga0501035_0006220 3300049822 Bacteria 11232
116 Ga0501035_0127566 3300049822 Bacteria 2220
117 Ga0501044_0000087 3300049823 Bacteria 112979
118 Ga0501044_0015756 3300049823 Bacteria 8141
119 Ga0501044_0088666 3300049823 Bacteria 3122
120 Ga0501044_0143821 3300049823 Bacteria 2372
121 Ga0501044_0151748 3300049823 Bacteria 2299
122 Ga0501044_0373427 3300049823 Bacteria 1342
123 Ga0500608_158138 3300053122 Bacteria 985
124 Ga0500618_000415 3300053125 Bacteria 28810
125 Ga0500616_0006659 3300053153 Bacteria 7513
126 Ga0500616_0010637 3300053153 Bacteria 5491
127 Ga0500633_0035958 3300053160 Bacteria 1635
128 Ga0500636_0060213 3300053177 Bacteria 2217
129 Ga0501084_0025923 3300054114 Bacteria 4888
130 Ga0501084_0096445 3300054114 Bacteria 2484
131 Ga0501084_0369793 3300054114 Bacteria 1211
132 Ga0501082_0008377 3300060353 Bacteria 8917
133 Ga0501082_0055477 3300060353 Bacteria 3414
134 Ga0501082_0100790 3300060353 Bacteria 2498
135 Ga0501082_0138613 3300060353 Bacteria 2111
136 Ga0501082_0585514 3300060353 Bacteria 976

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049744 Ga0501083_0402646 Ga0501083_0402646_108_869 239
2 3300049573 Ga0501037_0166913 Ga0501037_0166913_12_782 248
3 3300049583 Ga0501067_0001388 Ga0501067_0001388_10857_11672 256
4 3300049592 Ga0501076_0168132 Ga0501076_0168132_945_1760 256
5 3300054114 Ga0501084_0025923 Ga0501084_0025923_2374_3189 256
6 3300060353 Ga0501082_0008377 Ga0501082_0008377_822_1637 256
7 3300049583 Ga0501067_0033788 Ga0501067_0033788_1535_2344 261
8 3300049593 Ga0501077_0022693 Ga0501077_0022693_2312_3121 261
9 3300060353 Ga0501082_0138613 Ga0501082_0138613_1011_1820 261
10 3300054114 Ga0501084_0369793 Ga0501084_0369793_299_1114 262
11 3300060353 Ga0501082_0100790 Ga0501082_0100790_245_1063 262
12 3300060353 Ga0501082_0585514 Ga0501082_0585514_138_953 262
13 3300031548 Ga0307408_100277537 Ga0307408_1002775372 272
14 3300031852 Ga0307410_10027354 Ga0307410_100273542 272
15 3300031901 Ga0307406_10275544 Ga0307406_102755442 272
16 3300032002 Ga0307416_100533042 Ga0307416_1005330421 272
17 3300032004 Ga0307414_10211565 Ga0307414_102115652 272
18 3300032005 Ga0307411_10064507 Ga0307411_100645072 272
19 3300032126 Ga0307415_100026382 Ga0307415_1000263822 272
20 3300049571 Ga0501034_0260392 Ga0501034_0260392_587_1510 277
21 iso_pu_bacteria 2837651117 2837651471 281
22 3300025297 Ga0209758_1004699 Ga0209758_10046995 282
23 3300048904 Ga0496101_0146444 Ga0496101_0146444_699_1595 282
24 iso_pu_bacteria 2508501122 2509111769 282
25 iso_pu_bacteria 2690316117 2692317664 282
26 iso_pu_bacteria 2751185821 2753459864 282
27 iso_pu_bacteria 2791355091 2792621053 282
28 iso_pu_bacteria 2791355092 2792625268 282
29 iso_pu_bacteria 2791355253 2793282559 282
30 iso_pu_bacteria 2847417321 2847421356 282
31 iso_pu_bacteria 2848992105 2848996141 282
32 iso_pu_bacteria 2855872281 2855877849 282
33 3300038443 Ga0395901_0038177 Ga0395901_0038177_2766_3641 283
34 3300049571 Ga0501034_0249510 Ga0501034_0249510_550_1425 283
35 3300039450 Ga0436363_0098989 Ga0436363_0098989_1165_2025 284
36 3300044684 Ga0466966_0046663 Ga0466966_0046663_396_1256 284
37 3300044719 Ga0466971_0021810 Ga0466971_0021810_835_1695 284
38 3300044842 Ga0466957_0185174 Ga0466957_0185174_226_1086 284
39 3300045049 Ga0466959_0079826 Ga0466959_0079826_902_1762 284
40 3300049568 Ga0501031_0000243 Ga0501031_0000243_19903_20811 284
41 3300049568 Ga0501031_0025183 Ga0501031_0025183_2271_3170 284
42 3300049570 Ga0501033_0091858 Ga0501033_0091858_177_1076 284
43 3300049571 Ga0501034_0033827 Ga0501034_0033827_1145_2044 284
44 3300049573 Ga0501037_0024883 Ga0501037_0024883_1145_2044 284
45 3300049575 Ga0501039_0061573 Ga0501039_0061573_1369_2259 284
46 3300049576 Ga0501040_0022855 Ga0501040_0022855_1621_2520 284
47 3300049578 Ga0501042_0002746 Ga0501042_0002746_3461_4360 284
48 3300049579 Ga0501043_0011089 Ga0501043_0011089_835_1734 284
49 3300049590 Ga0501074_0011611 Ga0501074_0011611_3672_4571 284
50 3300049822 Ga0501035_0127566 Ga0501035_0127566_177_1076 284
51 3300049823 Ga0501044_0143821 Ga0501044_0143821_1058_1948 284
52 iso_pu_bacteria 2508501050 2508735137 284
53 iso_pu_bacteria 2508501114 2509076616 284
54 iso_pu_bacteria 2643221733 2644730374 284
55 iso_pu_bacteria 2643221734 2644738085 284
56 iso_pu_bacteria 2773857925 2774873304 284
57 iso_pu_bacteria 2818991467 2819720252 284
58 iso_pu_bacteria 2841760612 2841764062 284
59 iso_pu_bacteria 2844104063 2844108483 284
60 iso_pu_bacteria 2851182111 2851185301 284
61 iso_pu_bacteria 2851246043 2851250497 284
62 iso_pu_bacteria 2889790730 2889795462 284
63 iso_pu_bacteria 2889914905 2889917175 284
64 iso_pu_bacteria 2894232714 2894242787 284
65 iso_pu_bacteria 2917699015 2917702172 284
66 iso_pu_bacteria 8057529695 8057534018 284
67 3300005334 Ga0068869_100184812 Ga0068869_1001848121 285
68 3300025284 Ga0209130_1010496 Ga0209130_10104961 285
69 3300032005 Ga0307411_10152145 Ga0307411_101521452 285
70 3300003775 Ga0055524_1009609 Ga0055524_10096093 286
71 3300005262 Ga0065165_1002307 Ga0065165_10023075 286
72 3300005455 Ga0070663_100318100 Ga0070663_1003181002 286
73 3300005548 Ga0070665_100108538 Ga0070665_1001085384 286
74 3300006946 Ga0079104_1000033 Ga0079104_100003345 286
75 3300021321 Ga0214542_1017378 Ga0214542_10173786 286
76 3300026067 Ga0207678_10148135 Ga0207678_101481352 286
77 3300027111 Ga0209281_1000043 Ga0209281_1000043183 286
78 3300031548 Ga0307408_100507150 Ga0307408_1005071501 286
79 3300042015 Ga0439462_0034823 Ga0439462_0034823_93_968 286
80 3300048925 Ga0496122_0000018 Ga0496122_0000018_199959_200834 286
81 3300048926 Ga0496123_0000015 Ga0496123_0000015_199959_200834 286
82 3300048927 Ga0496124_0161698 Ga0496124_0161698_123_998 286
83 3300049568 Ga0501031_0074382 Ga0501031_0074382_637_1521 286
84 3300049569 Ga0501032_0002337 Ga0501032_0002337_5557_6441 286
85 3300049570 Ga0501033_0004831 Ga0501033_0004831_9450_10334 286
86 3300049570 Ga0501033_0013185 Ga0501033_0013185_4776_5699 286
87 3300049570 Ga0501033_0119843 Ga0501033_0119843_770_1690 286
88 3300049571 Ga0501034_0002538 Ga0501034_0002538_11458_12363 286
89 3300049571 Ga0501034_0056140 Ga0501034_0056140_1861_2757 286
90 3300049571 Ga0501034_0339518 Ga0501034_0339518_239_1129 286
91 3300049573 Ga0501037_0000236 Ga0501037_0000236_37332_38216 286
92 3300049574 Ga0501038_0101824 Ga0501038_0101824_1049_1972 286
93 3300049579 Ga0501043_0000065 Ga0501043_0000065_83036_83920 286
94 3300049579 Ga0501043_0167855 Ga0501043_0167855_117_1040 286
95 3300049581 Ga0501047_0024316 Ga0501047_0024316_4441_5364 286
96 3300049581 Ga0501047_0030704 Ga0501047_0030704_309_1205 286
97 3300049581 Ga0501047_0053804 Ga0501047_0053804_1524_2414 286
98 3300049584 Ga0501068_0015856 Ga0501068_0015856_1545_2429 286
99 3300049585 Ga0501069_0000002 Ga0501069_0000002_185717_186601 286
100 3300049585 Ga0501069_0010934 Ga0501069_0010934_1980_2903 286
101 3300049586 Ga0501070_0000339 Ga0501070_0000339_7715_8599 286
102 3300049586 Ga0501070_0002288 Ga0501070_0002288_6867_7790 286
103 3300049586 Ga0501070_0008282 Ga0501070_0008282_7014_7937 286
104 3300049587 Ga0501071_0038302 Ga0501071_0038302_2119_3003 286
105 3300049589 Ga0501073_0038541 Ga0501073_0038541_1521_2444 286
106 3300049590 Ga0501074_0000009 Ga0501074_0000009_86280_87164 286
107 3300049590 Ga0501074_0030437 Ga0501074_0030437_2685_3569 286
108 3300049590 Ga0501074_0130173 Ga0501074_0130173_749_1639 286
109 3300049742 Ga0501080_0000617 Ga0501080_0000617_5038_5922 286
110 3300049742 Ga0501080_0010903 Ga0501080_0010903_4602_5525 286
111 3300049744 Ga0501083_0000522 Ga0501083_0000522_21736_22620 286
112 3300049822 Ga0501035_0000124 Ga0501035_0000124_9735_10619 286
113 3300049822 Ga0501035_0004856 Ga0501035_0004856_6768_7691 286
114 3300049822 Ga0501035_0005548 Ga0501035_0005548_6066_6989 286
115 3300049822 Ga0501035_0006220 Ga0501035_0006220_2448_3338 286
116 3300049823 Ga0501044_0000087 Ga0501044_0000087_56769_57653 286
117 3300049823 Ga0501044_0015756 Ga0501044_0015756_6717_7640 286
118 3300049823 Ga0501044_0088666 Ga0501044_0088666_1001_1924 286
119 3300049823 Ga0501044_0373427 Ga0501044_0373427_262_1185 286
120 3300053125 Ga0500618_000415 Ga0500618_000415_5263_6348 286
121 3300054114 Ga0501084_0096445 Ga0501084_0096445_1110_1994 286
122 3300060353 Ga0501082_0055477 Ga0501082_0055477_423_1307 286
123 iso_pu_bacteria 2512047086 2512535063 286
124 iso_pu_bacteria 2657244999 2657682866 286
125 iso_pu_bacteria 643692032 643827847 286
126 3300003187 JGI25151J46595_10000188 JGI25151J46595_1000018859 288
127 3300003771 Ga0055526_1001324 Ga0055526_100132410 288
128 3300003771 Ga0055526_1001443 Ga0055526_100144314 288
129 3300003775 Ga0055524_1000989 Ga0055524_100098910 288
130 3300005262 Ga0065165_1000150 Ga0065165_1000150102 288
131 3300006941 Ga0099825_1025744 Ga0099825_10257442 288
132 3300006942 Ga0099824_1017411 Ga0099824_10174112 288
133 3300006943 Ga0099822_1004073 Ga0099822_100407318 288
134 3300014326 Ga0157380_10119916 Ga0157380_101199162 288
135 3300025273 Ga0209673_1021273 Ga0209673_10212732 288
136 3300025284 Ga0209130_1000187 Ga0209130_10001874 288
137 3300025291 Ga0209675_1002417 Ga0209675_10024173 288
138 3300025294 Ga0209025_1000187 Ga0209025_1000187136 288
139 3300025294 Ga0209025_1001133 Ga0209025_100113314 288
140 3300025294 Ga0209025_1019946 Ga0209025_10199463 288
141 3300025295 Ga0209564_1000052 Ga0209564_1000052333 288
142 3300025295 Ga0209564_1000632 Ga0209564_100063214 288
143 3300025299 Ga0209256_1000099 Ga0209256_1000099182 288
144 3300025299 Ga0209256_1000240 Ga0209256_100024093 288
145 3300027357 Ga0209589_1000006 Ga0209589_1000006222 288
146 3300027361 Ga0209489_100007 Ga0209489_100007222 288
147 3300027363 Ga0209700_100008 Ga0209700_100008222 288
148 3300031901 Ga0307406_10459398 Ga0307406_104593982 288
149 3300046810 Ga0495660_0122777 Ga0495660_0122777_230_1105 288
150 3300048920 Ga0496117_0050003 Ga0496117_0050003_1343_2209 288
151 3300048920 Ga0496117_0065468 Ga0496117_0065468_636_1502 288
152 3300048921 Ga0496118_0083991 Ga0496118_0083991_715_1581 288
153 3300048925 Ga0496122_0020850 Ga0496122_0020850_656_1522 288
154 3300048925 Ga0496122_0174681 Ga0496122_0174681_289_1155 288
155 3300048929 Ga0496126_0395651 Ga0496126_0395651_29_895 288
156 3300049570 Ga0501033_0218281 Ga0501033_0218281_31_897 288
157 3300049573 Ga0501037_0014542 Ga0501037_0014542_227_1093 288
158 3300049573 Ga0501037_0179675 Ga0501037_0179675_99_965 288
159 3300049823 Ga0501044_0151748 Ga0501044_0151748_319_1185 288
160 3300053122 Ga0500608_158138 Ga0500608_158138_40_906 288
161 3300053153 Ga0500616_0006659 Ga0500616_0006659_1566_2441 288
162 3300053153 Ga0500616_0010637 Ga0500616_0010637_767_1639 288
163 3300053160 Ga0500633_0035958 Ga0500633_0035958_694_1569 288
164 3300053177 Ga0500636_0060213 Ga0500636_0060213_687_1553 288
165 iso_pu_bacteria 2643221736 2644742649 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

16

229

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ius-assembly1.cif.gz_A the structure of a functionally unknown conserved protein from silicibacter pomeroyi dss 0.9397 2 288
3ius-assembly2.cif.gz_B the structure of a functionally unknown conserved protein from silicibacter pomeroyi dss 0.9351 2 288
7z98-assembly1.cif.gz_A crystal structure of f191m variant variovorax paradoxus indole monooxygenase (vpinda1) in complex with methyl phenyl sulfide 0.9282 1 32
3ius-assembly1.cif.gz_A the structure of a functionally unknown conserved protein from silicibacter pomeroyi dss 0.9268 2 288
3ius-assembly2.cif.gz_B the structure of a functionally unknown conserved protein from silicibacter pomeroyi dss 0.9253 2 288
ID Description Score Start End Superfamily
3iusB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9341 2 288 3.40.50.720
3iusB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9242 2 288 3.40.50.720
af_A4HVU0_28_425_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8956 2 32 3.50.50.60
af_B0G160_35_582_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8875 3 32 3.50.50.60
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8874 2 33 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A849ECK4-F1-model_v4 SDR family oxidoreductase 0.982 66 283
AF-A0A7T0BX38-F1-model_v4 SDR family oxidoreductase 0.9809 2 286
AF-A0A836QPR4-F1-model_v4 SDR family oxidoreductase 0.9792 2 223
AF-A0A2S5MD92-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9789 2 288
AF-A0A2E0H3A3-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9783 20 285

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pLDDT pTM Quality
95.41 0.93 High
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Predicted Structure (AlphaFold2)

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