F246705

General Info

Members Datasets Scaffolds Average Seq Length
165 113 330 358

Family's Representative Sequence

Representative Sequence 3300041413|Ga0439465_0011729|Ga0439465_0011729_282_1448
Length 388
Sequence LEKIIYPYYFYTSIFDSWEKGRFINHFLNFNMARLQSVITATGSYLPEHIVFNNDFIHHHFFQKDGSVVPGTTQRNIEKFKEITGIGQRRYAGDEQNASDLAFLAATDALTNAGINKESLDYIIVAHNFGDVVHGSNRINLLPSLATKVKFLLQIKNPRCIAYDLVFGCPGWLQGLIQADYYLRSGDAKRCLVIGTETLSRVIDEYDRDCMIYADGAGAVVVEAVQNAAAGIISHQTQTYASEHAMLLTMDRSYKQPCDNNNTYLKMNGRGVYEFALQYVPQVVKQTLDKAQVHISEIKKVLIHQANEKMDQAILHRLFKLYDINSFSSDIMPMTISWLGNSSVATIPTLLDLIRKDKLDQHQIRPGDKVVFASVGAGMNINALLYQF

Samples

Sample ID Description Type Environment
1 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
33 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
36 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
53 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
54 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
55 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
56 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
57 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
58 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
62 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
63 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
64 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
65 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
76 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
77 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
83 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
84 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
85 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
86 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
95 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
103 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
104 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
108 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
109 2738541283 Pedobacter sp. OK701 Isolate Unclassified
110 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
111 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
112 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
113 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.97
Metatranscriptomes 0
Isolates 3.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.64
Nodule 0
Rhizoplane 1.82
Rhizosphere 86.06
Stem 0
Stem Tuber 0
Unclassified 7.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439465_0011729 3300041413 Bacteria 2747
2 JGI24740J21852_10006463 3300001979 Unclassified 4849
3 JGI24740J21852_10007098 3300001979 Bacteria 4585
4 rootH1_10067657 3300003316 Bacteria 3036
5 rootH1_10113888 3300003316 Bacteria 5062
6 rootL2_10325307 3300003322 Bacteria 2609
7 Ga0055531_10000067 3300003794 Bacteria 114289
8 Ga0065165_1000481 3300005262 Bacteria 62027
9 Ga0070658_10000153 3300005327 Bacteria 60625
10 Ga0070670_100012059 3300005331 Bacteria 7395
11 Ga0070660_100105452 3300005339 Bacteria 2237
12 Ga0070659_100000016 3300005366 Bacteria 169522
13 Ga0070714_100111861 3300005435 Bacteria 2419
14 Ga0070713_100064431 3300005436 Bacteria 3076
15 Ga0070678_100168805 3300005456 Bacteria 1780
16 Ga0068853_100210277 3300005539 Bacteria 1773
17 Ga0070672_100292684 3300005543 Unclassified 1379
18 Ga0070665_100009738 3300005548 Bacteria 9716
19 Ga0068855_100000354 3300005563 Bacteria 56753
20 Ga0068855_100061396 3300005563 Bacteria 4392
21 Ga0068856_100105217 3300005614 Bacteria 2816
22 Ga0075428_100011259 3300006844 Bacteria 9949
23 Ga0105240_10132774 3300009093 Bacteria 2984
24 Ga0105240_10222962 3300009093 Bacteria 2195
25 Ga0111539_10029963 3300009094 Bacteria 6619
26 Ga0105245_10391640 3300009098 Bacteria 1386
27 Ga0114129_10068318 3300009147 Bacteria 4955
28 Ga0105242_10007275 3300009176 Bacteria 8538
29 Ga0105242_10033159 3300009176 Bacteria 4134
30 Ga0105237_10000311 3300009545 Bacteria 67880
31 Ga0105237_10201132 3300009545 Bacteria 1992
32 Ga0105239_10051011 3300010375 Bacteria 4537
33 Ga0105239_10290021 3300010375 Bacteria 1843
34 Ga0157373_10001835 3300013100 Bacteria 16170
35 Ga0157370_10008058 3300013104 Bacteria 11408
36 Ga0157370_10023247 3300013104 Bacteria 6155
37 Ga0157370_10415443 3300013104 Bacteria 1238
38 Ga0157369_10000566 3300013105 Bacteria 48674
39 Ga0157369_10066994 3300013105 Bacteria 3862
40 Ga0157375_10032921 3300013308 Bacteria 4921
41 Ga0157380_10018055 3300014326 Bacteria 5232
42 Ga0157380_10018070 3300014326 Bacteria 5230
43 Ga0157380_10096632 3300014326 Bacteria 2449
44 Ga0182008_10001521 3300014497 Bacteria 15458
45 Ga0182006_1002324 3300015261 Bacteria 10455
46 Ga0163161_10000622 3300017792 Bacteria 28395
47 Ga0163161_10009531 3300017792 Bacteria 6715
48 Ga0209026_1002427 3300025250 Bacteria 7008
49 Ga0209455_1004961 3300025272 Bacteria 4221
50 Ga0209257_1000005 3300025304 Bacteria 1592528
51 Ga0207647_10008568 3300025904 Bacteria 7321
52 Ga0207705_10000108 3300025909 Bacteria 93501
53 Ga0207695_10005271 3300025913 Bacteria 17237
54 Ga0207695_10213410 3300025913 Bacteria 1840
55 Ga0207671_10000991 3300025914 Bacteria 34985
56 Ga0207657_10120998 3300025919 Bacteria 2154
57 Ga0207690_10000099 3300025932 Bacteria 71527
58 Ga0207686_10016536 3300025934 Bacteria 4140
59 Ga0207667_10000463 3300025949 Bacteria 54624
60 Ga0207667_10147679 3300025949 Bacteria 2420
61 Ga0207702_10163606 3300026078 Bacteria 2034
62 Ga0207674_10015043 3300026116 Bacteria 8523
63 Ga0207683_10205038 3300026121 Bacteria 1793
64 Ga0268266_10008636 3300028379 Bacteria 9045
65 Ga0307515_10000061 3300028794 Bacteria 251841
66 Ga0307515_10090640 3300028794 Unclassified 3832
67 Ga0307515_10132656 3300028794 Bacteria 2731
68 Ga0265338_10239344 3300028800 Bacteria 1345
69 Ga0316177_1155453 3300030731 Bacteria 9961
70 Ga0316176_1071164 3300030732 Bacteria 13372
71 Ga0314311_1254455 3300030733 Bacteria 2029
72 Ga0316183_1151794 3300030742 Bacteria 80156
73 Ga0316181_1102158 3300030744 Bacteria 5448
74 Ga0316181_1170118 3300030744 Bacteria 1334
75 Ga0265332_10060124 3300031238 Bacteria 1626
76 Ga0265339_10024328 3300031249 Bacteria 3491
77 Ga0265327_10000837 3300031251 Bacteria 45956
78 Ga0265316_10080710 3300031344 Bacteria 2494
79 Ga0307509_10048902 3300031507 Bacteria 4538
80 Ga0307514_10122052 3300031649 Bacteria 1815
81 Ga0316575_10021471 3300031665 Bacteria 2485
82 Ga0316575_10022821 3300031665 Bacteria 2416
83 Ga0316575_10032897 3300031665 Unclassified 2033
84 Ga0316575_10039623 3300031665 Unclassified 1860
85 Ga0316579_10008926 3300031691 Bacteria 4202
86 Ga0316579_10011192 3300031691 Unclassified 3808
87 Ga0316579_10032132 3300031691 Unclassified 2406
88 Ga0265314_10008603 3300031711 Bacteria 8731
89 Ga0316576_10006687 3300031727 Bacteria 7203
90 Ga0316576_10061454 3300031727 Bacteria 2753
91 Ga0316576_10108533 3300031727 Bacteria 2079
92 Ga0316576_10181484 3300031727 Unclassified 1587
93 Ga0316576_10295793 3300031727 Bacteria 1210
94 Ga0316578_10002028 3300031728 Bacteria 8628
95 Ga0316578_10013681 3300031728 Bacteria 4310
96 Ga0316578_10014972 3300031728 Bacteria 4158
97 Ga0316578_10108688 3300031728 Bacteria 1665
98 Ga0307405_10000005 3300031731 Bacteria 376536
99 Ga0316577_10002223 3300031733 Bacteria 9542
100 Ga0316577_10002320 3300031733 Bacteria 9389
101 Ga0316577_10007137 3300031733 Bacteria 5944
102 Ga0316577_10008565 3300031733 Bacteria 5485
103 Ga0307412_10011304 3300031911 Bacteria 5165
104 Ga0307409_100023084 3300031995 Bacteria 4303
105 Ga0307416_100005507 3300032002 Bacteria 7784
106 Ga0307414_10001825 3300032004 Bacteria 11002
107 Ga0307415_100078964 3300032126 Bacteria 2343
108 Ga0316583_10009215 3300032133 Unclassified 3558
109 Ga0316583_10020959 3300032133 Bacteria 2343
110 Ga0316585_10001698 3300032137 Bacteria 5857
111 Ga0316585_10002320 3300032137 Bacteria 5121
112 Ga0316585_10005581 3300032137 Bacteria 3557
113 Ga0316580_10010774 3300032139 Bacteria 2769
114 Ga0316580_10015562 3300032139 Bacteria 2328
115 Ga0316574_0005005 3300035398 Bacteria 7032
116 Ga0316574_0007148 3300035398 Bacteria 6102
117 Ga0373935_0089308 3300035692 Bacteria 2015
118 Ga0316582_0006068 3300036647 Bacteria 6301
119 Ga0316582_0025155 3300036647 Bacteria 3571
120 Ga0316582_0081342 3300036647 Bacteria 2116
121 Ga0316582_0115816 3300036647 Bacteria 1788
122 Ga0316584_0020460 3300036712 Bacteria 4798
123 Ga0316584_0037805 3300036712 Bacteria 3588
124 Ga0316584_0049038 3300036712 Bacteria 3156
125 Ga0316584_0163938 3300036712 Bacteria 1650
126 Ga0316581_0003432 3300037588 Bacteria 3944
127 Ga0400483_035741 3300039062 Bacteria 7100
128 Ga0400489_80985 3300039093 Bacteria 1286
129 Ga0439431_0004871 3300041997 Bacteria 2959
130 Ga0451577_0001788 3300042876 Bacteria 27572
131 Ga0451577_0011035 3300042876 Bacteria 8582
132 Ga0451577_0274524 3300042876 Bacteria 1527
133 Ga0453683_0129370 3300044673 Bacteria 1590
134 Ga0453684_0000880 3300044712 Bacteria 100396
135 Ga0453684_0004825 3300044712 Bacteria 27702
136 Ga0453684_0029837 3300044712 Bacteria 7727
137 Ga0453684_0076326 3300044712 Bacteria 4208
138 Ga0453684_0276132 3300044712 Unclassified 1918
139 Ga0451576_0002946 3300045051 Bacteria 24140
140 Ga0451576_0040447 3300045051 Bacteria 4934
141 Ga0495580_0128113 3300046472 Bacteria 1762
142 Ga0495582_0012034 3300046473 Bacteria 4767
143 Ga0495606_0021268 3300046507 Unclassified 4755
144 Ga0495652_0064554 3300046529 Bacteria 3079
145 Ga0495665_0034218 3300046531 Bacteria 2717
146 Ga0495609_0007971 3300046538 Bacteria 5233
147 Ga0495613_0053696 3300046689 Bacteria 2964
148 Ga0496114_0376404 3300048917 Bacteria 1257
149 Ga0496115_0025945 3300048918 Bacteria 4568
150 Ga0496115_0185693 3300048918 Bacteria 1718
151 Ga0496122_0000783 3300048925 Bacteria 61156
152 Ga0496123_0002343 3300048926 Bacteria 23754
153 Ga0501034_0019140 3300049571 Bacteria 7010
154 Ga0501202_003949 3300049652 Bacteria 2568
155 Ga0501223_000884 3300049663 Bacteria 7106
156 Ga0501257_002790 3300049686 Bacteria 3694
157 nmdc:mga05p37_37803_c1 3300050507 Bacteria 5920
158 nmdc:mga08y16_113849_c1 3300050511 Unclassified 2816
159 Ga0500562_000062 3300053108 Bacteria 53042
160 Ga0500622_0009568 3300053156 Bacteria 5359
161 2738755763 2738541283 Bacteria 7222293
162 2896111121 2896109856 Bacteria 7140722
163 2902049579 2902048731 Bacteria 4976191
164 2911140694 2911138879 Bacteria 5811561
165 8055591710 8055588893 Bacteria 3619545
166 Ga0439465_0011729
167 JGI24740J21852_10006463
168 JGI24740J21852_10007098
169 rootH1_10067657
170 rootH1_10113888
171 rootL2_10325307
172 Ga0055531_10000067
173 Ga0065165_1000481
174 Ga0070658_10000153
175 Ga0070670_100012059
176 Ga0070660_100105452
177 Ga0070659_100000016
178 Ga0070714_100111861
179 Ga0070713_100064431
180 Ga0070678_100168805
181 Ga0068853_100210277
182 Ga0070672_100292684
183 Ga0070665_100009738
184 Ga0068855_100000354
185 Ga0068855_100061396
186 Ga0068856_100105217
187 Ga0075428_100011259
188 Ga0105240_10132774
189 Ga0105240_10222962
190 Ga0111539_10029963
191 Ga0105245_10391640
192 Ga0114129_10068318
193 Ga0105242_10007275
194 Ga0105242_10033159
195 Ga0105237_10000311
196 Ga0105237_10201132
197 Ga0105239_10051011
198 Ga0105239_10290021
199 Ga0157373_10001835
200 Ga0157370_10008058
201 Ga0157370_10023247
202 Ga0157370_10415443
203 Ga0157369_10000566
204 Ga0157369_10066994
205 Ga0157375_10032921
206 Ga0157380_10018055
207 Ga0157380_10018070
208 Ga0157380_10096632
209 Ga0182008_10001521
210 Ga0182006_1002324
211 Ga0163161_10000622
212 Ga0163161_10009531
213 Ga0209026_1002427
214 Ga0209455_1004961
215 Ga0209257_1000005
216 Ga0207647_10008568
217 Ga0207705_10000108
218 Ga0207695_10005271
219 Ga0207695_10213410
220 Ga0207671_10000991
221 Ga0207657_10120998
222 Ga0207690_10000099
223 Ga0207686_10016536
224 Ga0207667_10000463
225 Ga0207667_10147679
226 Ga0207702_10163606
227 Ga0207674_10015043
228 Ga0207683_10205038
229 Ga0268266_10008636
230 Ga0307515_10000061
231 Ga0307515_10090640
232 Ga0307515_10132656
233 Ga0265338_10239344
234 Ga0316177_1155453
235 Ga0316176_1071164
236 Ga0314311_1254455
237 Ga0316183_1151794
238 Ga0316181_1102158
239 Ga0316181_1170118
240 Ga0265332_10060124
241 Ga0265339_10024328
242 Ga0265327_10000837
243 Ga0265316_10080710
244 Ga0307509_10048902
245 Ga0307514_10122052
246 Ga0316575_10021471
247 Ga0316575_10022821
248 Ga0316575_10032897
249 Ga0316575_10039623
250 Ga0316579_10008926
251 Ga0316579_10011192
252 Ga0316579_10032132
253 Ga0265314_10008603
254 Ga0316576_10006687
255 Ga0316576_10061454
256 Ga0316576_10108533
257 Ga0316576_10181484
258 Ga0316576_10295793
259 Ga0316578_10002028
260 Ga0316578_10013681
261 Ga0316578_10014972
262 Ga0316578_10108688
263 Ga0307405_10000005
264 Ga0316577_10002223
265 Ga0316577_10002320
266 Ga0316577_10007137
267 Ga0316577_10008565
268 Ga0307412_10011304
269 Ga0307409_100023084
270 Ga0307416_100005507
271 Ga0307414_10001825
272 Ga0307415_100078964
273 Ga0316583_10009215
274 Ga0316583_10020959
275 Ga0316585_10001698
276 Ga0316585_10002320
277 Ga0316585_10005581
278 Ga0316580_10010774
279 Ga0316580_10015562
280 Ga0316574_0005005
281 Ga0316574_0007148
282 Ga0373935_0089308
283 Ga0316582_0006068
284 Ga0316582_0025155
285 Ga0316582_0081342
286 Ga0316582_0115816
287 Ga0316584_0020460
288 Ga0316584_0037805
289 Ga0316584_0049038
290 Ga0316584_0163938
291 Ga0316581_0003432
292 Ga0400483_035741
293 Ga0400489_80985
294 Ga0439431_0004871
295 Ga0451577_0001788
296 Ga0451577_0011035
297 Ga0451577_0274524
298 Ga0453683_0129370
299 Ga0453684_0000880
300 Ga0453684_0004825
301 Ga0453684_0029837
302 Ga0453684_0076326
303 Ga0453684_0276132
304 Ga0451576_0002946
305 Ga0451576_0040447
306 Ga0495580_0128113
307 Ga0495582_0012034
308 Ga0495606_0021268
309 Ga0495652_0064554
310 Ga0495665_0034218
311 Ga0495609_0007971
312 Ga0495613_0053696
313 Ga0496114_0376404
314 Ga0496115_0025945
315 Ga0496115_0185693
316 Ga0496122_0000783
317 Ga0496123_0002343
318 Ga0501034_0019140
319 Ga0501202_003949
320 Ga0501223_000884
321 Ga0501257_002790
322 nmdc:mga05p37_37803_c1
323 nmdc:mga08y16_113849_c1
324 Ga0500562_000062
325 Ga0500622_0009568
326 2738755763
327 2896111121
328 2902049579
329 2911140694
330 8055591710

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08545

ACP_syn_III

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III

163

241

0.93

PF08541

ACP_syn_III_C

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

288

388

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bnr-assembly1.cif.gz_A-2 e. coli fabh with small molecule inhibitor 2 0.9351 11 364
5bnr-assembly1.cif.gz_A-2 e. coli fabh with small molecule inhibitor 2 0.9292 11 364
4x9o-assembly1.cif.gz_A beta-ketoacyl-acp synthase iii -2 (fabh2) (c113a) from vibrio cholerae soaked with octanoyl-coa: conformational changes without clearly bound substrate 0.9252 10 366
4z19-assembly1.cif.gz_A-2 crystal structure of beta-ketoacyl-acp synthase iii (fabh) from yersinia pestis with acetylated active site cysteine 0.9242 11 364
4nhd-assembly2.cif.gz_B crystal structure of beta-ketoacyl-acp synthase iii (fabh) from vibrio cholerae in complex with coenzyme a 0.9203 11 364
ID Description Score Start End Superfamily
af_Q2FZS0_1_313_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.939 11 366 3.40.47.10
af_Q2FZS0_1_313_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9332 11 366 3.40.47.10
af_P0A6R0_1_317_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.92 11 364 3.40.47.10
af_P0A6R0_1_317_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9144 11 364 3.40.47.10
1zowB01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9143 11 198 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A4U6D891-F1-model_v4 Ketoacyl-ACP synthase III 0.9993 7 366 GO:0004315
GO:0006633
GO:0044550
AF-X1BZY9-F1-model_v4 Beta-ketoacyl-[acyl-carrier-protein] synthase III N-terminal domain-containing protein 0.9965 7 289 GO:0004315
GO:0006633
GO:0044550
AF-A0A519MN43-F1-model_v4 deleted 0.9957 8 329
AF-A0A5M4AXJ2-F1-model_v4 3-oxoacyl-ACP synthase 0.9949 7 365 GO:0004315
GO:0006633
GO:0044550
AF-A0A2N5ZN07-F1-model_v4 3-oxoacyl-ACP synthase 0.9939 8 276 GO:0004315
GO:0006633
GO:0044550

Map