F246550

General Info

Members Datasets Scaffolds Average Seq Length
165 36 330 74

Family's Representative Sequence

Representative Sequence 3300033524|Ga0316592_1085137|Ga0316592_10851371
Length 87
Sequence MEPIEGTERPDKGKRYMEKEFIDQIGKGFGEKNFGDVMVVGGGVSGIQASLDLATAGFKVYLVEKAPSIGGHMAQLDKTFPTNDCSM

Samples

Sample ID Description Type Environment
1 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
3 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
4 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
5 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
6 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
7 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
8 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
9 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
10 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
11 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
12 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
13 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
14 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
15 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
16 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
18 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
19 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
20 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
21 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
22 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
23 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
24 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
25 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
26 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
27 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
28 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
29 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
30 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
31 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
32 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
33 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
34 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
35 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
36 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.91
Metatranscriptomes 9.09
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 81.21
Stem 0
Stem Tuber 0
Unclassified 0.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316592_1085137 3300033524 Bacteria 721
2 Ga0265323_10006869 3300028653 Bacteria 4759
3 Ga0265322_10031412 3300028654 Bacteria 1516
4 Ga0265330_10076162 3300031235 Bacteria 1448
5 Ga0265329_10260921 3300031242 Bacteria 579
6 Ga0265316_10019832 3300031344 Bacteria 5740
7 Ga0265316_10020577 3300031344 Bacteria 5614
8 Ga0265316_10026501 3300031344 Bacteria 4819
9 Ga0265316_10067939 3300031344 Bacteria 2755
10 Ga0265316_10825912 3300031344 Bacteria 649
11 Ga0316575_10022400 3300031665 Bacteria 2437
12 Ga0316575_10038604 3300031665 Bacteria 1883
13 Ga0316575_10045139 3300031665 Bacteria 1749
14 Ga0316579_10037044 3300031691 Bacteria 2251
15 Ga0316579_10038277 3300031691 Bacteria 2217
16 Ga0316579_10041385 3300031691 Bacteria 2139
17 Ga0316579_10098696 3300031691 Bacteria 1397
18 Ga0265342_10257872 3300031712 Bacteria 929
19 Ga0265342_10459868 3300031712 Bacteria 652
20 Ga0265342_10535477 3300031712 Bacteria 595
21 Ga0316576_10001336 3300031727 Bacteria 13106
22 Ga0316576_10006686 3300031727 Bacteria 7203
23 Ga0316576_10020420 3300031727 Bacteria 4559
24 Ga0316576_10052943 3300031727 Bacteria 2956
25 Ga0316576_10057169 3300031727 Bacteria 2850
26 Ga0316576_10063829 3300031727 Bacteria 2704
27 Ga0316576_10086765 3300031727 Bacteria 2328
28 Ga0316576_10141867 3300031727 Bacteria 1809
29 Ga0316576_10146667 3300031727 Bacteria 1778
30 Ga0316576_10163157 3300031727 Bacteria 1681
31 Ga0316576_10209079 3300031727 Bacteria 1469
32 Ga0316576_10216607 3300031727 Bacteria 1441
33 Ga0316576_10235556 3300031727 Bacteria 1376
34 Ga0316576_10313269 3300031727 Bacteria 1172
35 Ga0316576_10341981 3300031727 Bacteria 1114
36 Ga0316576_10380893 3300031727 Bacteria 1047
37 Ga0316576_10381067 3300031727 Bacteria 1047
38 Ga0316576_10449661 3300031727 Bacteria 952
39 Ga0316576_10624018 3300031727 Bacteria 786
40 Ga0316576_10694577 3300031727 Bacteria 738
41 Ga0316576_10829846 3300031727 Bacteria 664
42 Ga0316576_10879079 3300031727 Bacteria 642
43 Ga0316578_10001456 3300031728 Bacteria 9631
44 Ga0316578_10032086 3300031728 Bacteria 2997
45 Ga0316578_10067504 3300031728 Bacteria 2114
46 Ga0316578_10160145 3300031728 Bacteria 1356
47 Ga0316578_10407934 3300031728 Bacteria 805
48 Ga0316578_10504510 3300031728 Bacteria 713
49 Ga0316578_10645004 3300031728 Bacteria 618
50 Ga0316578_10736786 3300031728 Bacteria 573
51 Ga0316577_10012394 3300031733 Bacteria 4645
52 Ga0316577_10033909 3300031733 Bacteria 2852
53 Ga0316577_10167259 3300031733 Bacteria 1240
54 Ga0316577_10168994 3300031733 Bacteria 1234
55 Ga0316577_10421154 3300031733 Bacteria 759
56 Ga0316583_10004606 3300032133 Bacteria 4917
57 Ga0316583_10005502 3300032133 Bacteria 4546
58 Ga0316583_10055927 3300032133 Bacteria 1386
59 Ga0316585_10005375 3300032137 Bacteria 3612
60 Ga0316585_10005865 3300032137 Bacteria 3484
61 Ga0316585_10041383 3300032137 Bacteria 1468
62 Ga0316580_10001256 3300032139 Bacteria 6534
63 Ga0316580_10003410 3300032139 Bacteria 4511
64 Ga0316580_10027900 3300032139 Bacteria 1744
65 Ga0316580_10043909 3300032139 Bacteria 1379
66 Ga0316593_10037021 3300032168 Bacteria 1611
67 Ga0316593_10077417 3300032168 Bacteria 1156
68 Ga0316593_10089759 3300032168 Bacteria 1081
69 Ga0316593_10171065 3300032168 Unclassified 796
70 Ga0316592_1107487 3300033524 Bacteria 644
71 Ga0316592_1135825 3300033524 Bacteria 575
72 Ga0316592_1143023 3300033524 Bacteria 562
73 Ga0316592_1158438 3300033524 Bacteria 536
74 Ga0316592_1174124 3300033524 Bacteria 513
75 Ga0316586_1073839 3300033527 Bacteria 631
76 Ga0316596_1034844 3300033541 Bacteria 1315
77 Ga0316596_1106275 3300033541 Bacteria 760
78 Ga0316596_1135661 3300033541 Bacteria 673
79 Ga0316596_1171216 3300033541 Bacteria 599
80 Ga0316574_0012421 3300035398 Bacteria 4871
81 Ga0316574_0018391 3300035398 Bacteria 4105
82 Ga0316574_0070072 3300035398 Bacteria 2214
83 Ga0316574_0085922 3300035398 Bacteria 2002
84 Ga0316574_0149456 3300035398 Bacteria 1505
85 Ga0316574_0181389 3300035398 Bacteria 1354
86 Ga0316574_0182382 3300035398 Bacteria 1350
87 Ga0316582_0008839 3300036647 Bacteria 5430
88 Ga0316582_0026535 3300036647 Bacteria 3488
89 Ga0316582_0041317 3300036647 Bacteria 2882
90 Ga0316582_0048111 3300036647 Bacteria 2695
91 Ga0316582_0072277 3300036647 Bacteria 2236
92 Ga0316582_0079976 3300036647 Bacteria 2132
93 Ga0316582_0107393 3300036647 Bacteria 1855
94 Ga0316582_0140069 3300036647 Bacteria 1630
95 Ga0316582_0167100 3300036647 Bacteria 1492
96 Ga0316582_0247616 3300036647 Bacteria 1221
97 Ga0316582_0315964 3300036647 Bacteria 1073
98 Ga0316582_0327108 3300036647 Bacteria 1054
99 Ga0316582_0437276 3300036647 Bacteria 902
100 Ga0316582_0457432 3300036647 Bacteria 880
101 Ga0316582_0500620 3300036647 Bacteria 837
102 Ga0316582_0573221 3300036647 Bacteria 777
103 Ga0316582_0975131 3300036647 Bacteria 579
104 Ga0316582_1004392 3300036647 Bacteria 569
105 Ga0316584_0018832 3300036712 Bacteria 4985
106 Ga0316584_0049780 3300036712 Bacteria 3132
107 Ga0316584_0087610 3300036712 Bacteria 2330
108 Ga0316584_0097077 3300036712 Bacteria 2206
109 Ga0316584_0171268 3300036712 Bacteria 1610
110 Ga0316584_0247656 3300036712 Bacteria 1302
111 Ga0316584_0346944 3300036712 Bacteria 1066
112 Ga0316584_0432962 3300036712 Bacteria 932
113 Ga0316584_0600736 3300036712 Bacteria 763
114 Ga0316584_0630721 3300036712 Bacteria 740
115 Ga0316584_0653217 3300036712 Bacteria 725
116 Ga0316584_0658969 3300036712 Bacteria 721
117 Ga0316584_0762747 3300036712 Bacteria 659
118 Ga0316584_0799006 3300036712 Bacteria 641
119 Ga0316584_0818561 3300036712 Bacteria 631
120 Ga0316584_0839413 3300036712 Bacteria 622
121 Ga0316584_0979585 3300036712 Bacteria 566
122 Ga0316581_0057162 3300037588 Bacteria 1196
123 Ga0316581_0079482 3300037588 Bacteria 1009
124 Ga0316581_0141908 3300037588 Bacteria 740
125 Ga0316581_0234371 3300037588 Bacteria 564
126 Ga0400484_17578 3300038725 Bacteria 1904
127 Ga0400484_43782 3300038725 Bacteria 5594
128 Ga0400490_03867 3300038726 Bacteria 1433
129 Ga0400490_21008 3300038726 Bacteria 1143
130 Ga0400490_32706 3300038726 Bacteria 4262
131 Ga0400491_19760 3300038727 Bacteria 1389
132 Ga0400491_27900 3300038727 Bacteria 2785
133 Ga0400485_06555 3300038735 Bacteria 71659
134 Ga0400488_45093 3300038741 Bacteria 6433
135 Ga0400488_52040 3300038741 Bacteria 4185
136 Ga0400488_59103 3300038741 Bacteria 1211
137 Ga0400488_61207 3300038741 Bacteria 2632
138 Ga0400486_07526 3300038742 Bacteria 30531
139 Ga0400483_058147 3300039062 Bacteria 10652
140 Ga0400483_127036 3300039062 Bacteria 4723
141 Ga0400483_206055 3300039062 Bacteria 2142
142 Ga0400483_233830 3300039062 Bacteria 10713
143 Ga0400483_237483 3300039062 Bacteria 3878
144 Ga0400483_292177 3300039062 Bacteria 1388
145 Ga0400489_04933 3300039093 Bacteria 3056
146 Ga0400489_05066 3300039093 Bacteria 2204
147 Ga0400489_05667 3300039093 Bacteria 1030
148 Ga0400489_20232 3300039093 Bacteria 5559
149 Ga0400489_31812 3300039093 Bacteria 47302
150 Ga0400489_44795 3300039093 Bacteria 1650
151 Ga0400489_62560 3300039093 Bacteria 13681
152 Ga0400489_67167 3300039093 Bacteria 12017
153 Ga0400489_76400 3300039093 Bacteria 1139
154 Ga0400489_76486 3300039093 Bacteria 1553
155 Ga0400487_06228 3300039110 Bacteria 38638
156 Ga0400487_52071 3300039110 Bacteria 2750
157 Ga0451577_0482930 3300042876 Bacteria 1125
158 Ga0451577_1298470 3300042876 Bacteria 647
159 Ga0453683_1182914 3300044673 Bacteria 511
160 Ga0453684_0139802 3300044712 Bacteria 2894
161 Ga0453684_0248514 3300044712 Bacteria 2044
162 Ga0453684_0599235 3300044712 Bacteria 1208
163 Ga0451576_0081483 3300045051 Bacteria 3365
164 Ga0451576_1560645 3300045051 Bacteria 685
165 Ga0501082_1849885 3300060353 Bacteria 527
166 Ga0316592_1085137
167 Ga0265323_10006869
168 Ga0265322_10031412
169 Ga0265330_10076162
170 Ga0265329_10260921
171 Ga0265316_10019832
172 Ga0265316_10020577
173 Ga0265316_10026501
174 Ga0265316_10067939
175 Ga0265316_10825912
176 Ga0316575_10022400
177 Ga0316575_10038604
178 Ga0316575_10045139
179 Ga0316579_10037044
180 Ga0316579_10038277
181 Ga0316579_10041385
182 Ga0316579_10098696
183 Ga0265342_10257872
184 Ga0265342_10459868
185 Ga0265342_10535477
186 Ga0316576_10001336
187 Ga0316576_10006686
188 Ga0316576_10020420
189 Ga0316576_10052943
190 Ga0316576_10057169
191 Ga0316576_10063829
192 Ga0316576_10086765
193 Ga0316576_10141867
194 Ga0316576_10146667
195 Ga0316576_10163157
196 Ga0316576_10209079
197 Ga0316576_10216607
198 Ga0316576_10235556
199 Ga0316576_10313269
200 Ga0316576_10341981
201 Ga0316576_10380893
202 Ga0316576_10381067
203 Ga0316576_10449661
204 Ga0316576_10624018
205 Ga0316576_10694577
206 Ga0316576_10829846
207 Ga0316576_10879079
208 Ga0316578_10001456
209 Ga0316578_10032086
210 Ga0316578_10067504
211 Ga0316578_10160145
212 Ga0316578_10407934
213 Ga0316578_10504510
214 Ga0316578_10645004
215 Ga0316578_10736786
216 Ga0316577_10012394
217 Ga0316577_10033909
218 Ga0316577_10167259
219 Ga0316577_10168994
220 Ga0316577_10421154
221 Ga0316583_10004606
222 Ga0316583_10005502
223 Ga0316583_10055927
224 Ga0316585_10005375
225 Ga0316585_10005865
226 Ga0316585_10041383
227 Ga0316580_10001256
228 Ga0316580_10003410
229 Ga0316580_10027900
230 Ga0316580_10043909
231 Ga0316593_10037021
232 Ga0316593_10077417
233 Ga0316593_10089759
234 Ga0316593_10171065
235 Ga0316592_1107487
236 Ga0316592_1135825
237 Ga0316592_1143023
238 Ga0316592_1158438
239 Ga0316592_1174124
240 Ga0316586_1073839
241 Ga0316596_1034844
242 Ga0316596_1106275
243 Ga0316596_1135661
244 Ga0316596_1171216
245 Ga0316574_0012421
246 Ga0316574_0018391
247 Ga0316574_0070072
248 Ga0316574_0085922
249 Ga0316574_0149456
250 Ga0316574_0181389
251 Ga0316574_0182382
252 Ga0316582_0008839
253 Ga0316582_0026535
254 Ga0316582_0041317
255 Ga0316582_0048111
256 Ga0316582_0072277
257 Ga0316582_0079976
258 Ga0316582_0107393
259 Ga0316582_0140069
260 Ga0316582_0167100
261 Ga0316582_0247616
262 Ga0316582_0315964
263 Ga0316582_0327108
264 Ga0316582_0437276
265 Ga0316582_0457432
266 Ga0316582_0500620
267 Ga0316582_0573221
268 Ga0316582_0975131
269 Ga0316582_1004392
270 Ga0316584_0018832
271 Ga0316584_0049780
272 Ga0316584_0087610
273 Ga0316584_0097077
274 Ga0316584_0171268
275 Ga0316584_0247656
276 Ga0316584_0346944
277 Ga0316584_0432962
278 Ga0316584_0600736
279 Ga0316584_0630721
280 Ga0316584_0653217
281 Ga0316584_0658969
282 Ga0316584_0762747
283 Ga0316584_0799006
284 Ga0316584_0818561
285 Ga0316584_0839413
286 Ga0316584_0979585
287 Ga0316581_0057162
288 Ga0316581_0079482
289 Ga0316581_0141908
290 Ga0316581_0234371
291 Ga0400484_17578
292 Ga0400484_43782
293 Ga0400490_03867
294 Ga0400490_21008
295 Ga0400490_32706
296 Ga0400491_19760
297 Ga0400491_27900
298 Ga0400485_06555
299 Ga0400488_45093
300 Ga0400488_52040
301 Ga0400488_59103
302 Ga0400488_61207
303 Ga0400486_07526
304 Ga0400483_058147
305 Ga0400483_127036
306 Ga0400483_206055
307 Ga0400483_233830
308 Ga0400483_237483
309 Ga0400483_292177
310 Ga0400489_04933
311 Ga0400489_05066
312 Ga0400489_05667
313 Ga0400489_20232
314 Ga0400489_31812
315 Ga0400489_44795
316 Ga0400489_62560
317 Ga0400489_67167
318 Ga0400489_76400
319 Ga0400489_76486
320 Ga0400487_06228
321 Ga0400487_52071
322 Ga0451577_0482930
323 Ga0451577_1298470
324 Ga0453683_1182914
325 Ga0453684_0139802
326 Ga0453684_0248514
327 Ga0453684_0599235
328 Ga0451576_0081483
329 Ga0451576_1560645
330 Ga0501082_1849885

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

36

75

0.97

PF12831

FAD_oxidored

FAD dependent oxidoreductase

36

83

0.95

PF01266

DAO

FAD dependent oxidoreductase

36

75

0.94

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

39

85

0.94

PF01134

GIDA

Glucose inhibited division protein A

36

85

0.84

Map