F246192

General Info

Members Datasets Scaffolds Average Seq Length
165 110 163 364

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10000072|Ga0157375_1000007264
Length 407
Sequence MIRKGPPLTTQKKQNMRNTRAQNVLVAAVSPLSLTADERSPISDHRPLATRHLALCLGLAAAGIFTGCHHLGPKTVAVDRFDYSTAIGDSWKQQTLLNIVKLRYMDLPVFVDVASVVSGYSLQTGVSVNGTVSSDRAVQGNFASAGGQVIYTDRPTITYVPLTGDKFMRGLITPIDPKNIFFLLQAGYAADFILALAVESLNGVRNRSTFGGTVREADPAFIRALDLLRDVQGAGAFGMRVEEDKVKGSTAVVFFQRDDVSAEIAEKGAEIRRLLKLPAEPHKFVLTYSPMRGAENELAVNSRSMLQIMQAFATFVDVPEAHLKDRSAWPAPQIAPTEEGRRPTVRIHSGKDKPASTFAAVRFRDYWFWVDNGDLQTKRALTVVMFFFTLADTGSPEKLPLITIPAQ

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
11 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
25 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
37 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
40 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
41 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
42 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
43 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
44 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
45 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
46 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
47 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
48 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
49 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
50 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
51 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
52 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
53 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
54 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
56 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
57 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
58 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
59 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
60 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
61 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
62 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
63 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
64 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
65 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
66 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
67 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
68 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
69 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
70 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
71 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
76 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
77 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
80 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
81 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
82 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
85 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
86 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
87 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
99 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
100 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
110 642555112 Paraburkholderia phymatum STM815 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.79
Metatranscriptomes 0
Isolates 1.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.61
Rhizoplane 2.42
Rhizosphere 96.97
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10042449 3300001979 Bacteria 1363
2 JGI24735J21928_10000481 3300002067 Bacteria 14059
3 Ga0065707_10001077 3300005295 Bacteria 13582
4 Ga0070689_100007661 3300005340 Bacteria 7564
5 Ga0070689_100049013 3300005340 Unclassified 3259
6 Ga0070674_100129213 3300005356 Unclassified 1881
7 Ga0070673_100117305 3300005364 Unclassified 2215
8 Ga0070688_100043416 3300005365 Bacteria 2770
9 Ga0070688_100093827 3300005365 Bacteria 1966
10 Ga0070714_100032107 3300005435 Unclassified 4383
11 Ga0070665_100001117 3300005548 Bacteria 32975
12 Ga0070665_100071411 3300005548 Unclassified 3478
13 Ga0068858_100062219 3300005842 Bacteria 3451
14 Ga0097621_100176589 3300006237 Bacteria 1844
15 Ga0097621_100214036 3300006237 Bacteria 1677
16 Ga0075428_100074851 3300006844 Bacteria 3698
17 Ga0075431_100142605 3300006847 Bacteria 2470
18 Ga0075429_100163623 3300006880 Bacteria 1949
19 Ga0105240_10006233 3300009093 Bacteria 17546
20 Ga0111539_10013254 3300009094 Bacteria 10307
21 Ga0105245_10067260 3300009098 Bacteria 3245
22 Ga0105245_10162303 3300009098 Bacteria 2121
23 Ga0114129_10239419 3300009147 Bacteria 2440
24 Ga0105248_10052083 3300009177 Bacteria 4593
25 Ga0157369_10066818 3300013105 Bacteria 3867
26 Ga0157369_10105886 3300013105 Bacteria 2994
27 Ga0163162_10152362 3300013306 Bacteria 2430
28 Ga0157375_10000072 3300013308 Bacteria 106823
29 Ga0157375_10168672 3300013308 Bacteria 2335
30 Ga0163163_10000167 3300014325 Bacteria 68931
31 Ga0157379_10183228 3300014968 Bacteria 1892
32 Ga0207695_10020266 3300025913 Bacteria 7621
33 Ga0207664_10026408 3300025929 Unclassified 4389
34 Ga0207686_10242670 3300025934 Bacteria 1312
35 Ga0207670_10001176 3300025936 Bacteria 13820
36 Ga0207704_10204689 3300025938 Bacteria 1447
37 Ga0207691_10045454 3300025940 Bacteria 4036
38 Ga0207711_10033507 3300025941 Bacteria 4346
39 Ga0207667_10141142 3300025949 Unclassified 2480
40 Ga0207703_10047514 3300026035 Bacteria 3461
41 Ga0207702_10005717 3300026078 Bacteria 10841
42 Ga0207641_10051519 3300026088 Bacteria 3486
43 Ga0207428_10005436 3300027907 Bacteria 11881
44 Ga0265337_1000081 3300028556 Bacteria 45619
45 Ga0265337_1015449 3300028556 Bacteria 2497
46 Ga0265338_10002814 3300028800 Bacteria 25398
47 Ga0373930_0006216 3300034816 Bacteria 2012
48 Ga0373928_0000805 3300035084 Bacteria 6111
49 Ga0373929_0001256 3300035085 Bacteria 4895
50 Ga0373944_0012436 3300035089 Bacteria 2345
51 Ga0373944_0071255 3300035089 Bacteria 1132
52 Ga0373949_0000741 3300035090 Bacteria 10552
53 Ga0373951_0001147 3300035091 Bacteria 7020
54 Ga0373932_0000002 3300035112 Bacteria 711821
55 Ga0373962_0000017 3300035242 Bacteria 47185
56 Ga0316574_0145363 3300035398 Bacteria 1528
57 Ga0373931_0000025 3300035691 Bacteria 129499
58 Ga0373927_0002391 3300035695 Bacteria 13684
59 Ga0373933_0102734 3300035724 Bacteria 1775
60 Ga0373937_0070013 3300036401 Bacteria 3235
61 Ga0316582_0019166 3300036647 Bacteria 3998
62 Ga0316584_0184746 3300036712 Bacteria 1543
63 Ga0373925_0000059 3300037068 Bacteria 120259
64 Ga0395905_0185304 3300037471 Bacteria 1954
65 Ga0395905_0369837 3300037471 Unclassified 1327
66 Ga0451577_0002532 3300042876 Bacteria 21617
67 Ga0451577_0003269 3300042876 Bacteria 18241
68 Ga0451577_0003759 3300042876 Bacteria 16542
69 Ga0451577_0011449 3300042876 Bacteria 8392
70 Ga0453684_0009932 3300044712 Bacteria 16422
71 Ga0453684_0010413 3300044712 Bacteria 15910
72 Ga0453684_0100038 3300044712 Bacteria 3550
73 Ga0453684_0189574 3300044712 Unclassified 2406
74 Ga0453684_0226924 3300044712 Unclassified 2159
75 Ga0453684_0302470 3300044712 Bacteria 1817
76 Ga0451576_0071494 3300045051 Bacteria 3611
77 Ga0451576_0244619 3300045051 Unclassified 1874
78 Ga0495592_0000108 3300046454 Bacteria 74029
79 Ga0495592_0008009 3300046454 Bacteria 7930
80 Ga0495603_0092902 3300046455 Bacteria 1764
81 Ga0495591_000896 3300046458 Bacteria 20833
82 Ga0495629_0000468 3300046459 Bacteria 33837
83 Ga0495629_0008852 3300046459 Bacteria 7401
84 Ga0495651_0027531 3300046462 Bacteria 4428
85 Ga0495653_0035829 3300046463 Bacteria 3913
86 Ga0495653_0167872 3300046463 Bacteria 1518
87 Ga0495580_0167476 3300046472 Unclassified 1520
88 Ga0495582_0003195 3300046473 Bacteria 9210
89 Ga0495662_0069070 3300046476 Bacteria 1711
90 Ga0495662_0107937 3300046476 Bacteria 1363
91 Ga0495664_0005384 3300046477 Bacteria 7025
92 Ga0495596_0004960 3300046500 Bacteria 6380
93 Ga0495608_0040255 3300046511 Bacteria 3131
94 Ga0495608_0081953 3300046511 Bacteria 2096
95 Ga0495608_0122087 3300046511 Bacteria 1670
96 Ga0495610_0008128 3300046512 Bacteria 6853
97 Ga0495618_0002516 3300046514 Bacteria 11749
98 Ga0495618_0015213 3300046514 Bacteria 4694
99 Ga0495628_0000042 3300046516 Bacteria 102062
100 Ga0495628_0001904 3300046516 Bacteria 18928
101 Ga0495628_0023865 3300046516 Bacteria 5015
102 Ga0495628_0193045 3300046516 Bacteria 1537
103 Ga0495630_0000749 3300046517 Bacteria 22893
104 Ga0495630_0001507 3300046517 Bacteria 16105
105 Ga0495630_0072617 3300046517 Bacteria 2590
106 Ga0495648_0020860 3300046524 Bacteria 4556
107 Ga0495666_0013148 3300046526 Bacteria 4123
108 Ga0495665_0014030 3300046531 Bacteria 4326
109 Ga0495640_0015316 3300046533 Bacteria 5773
110 Ga0495640_0029045 3300046533 Bacteria 3974
111 Ga0495586_0000387 3300046535 Bacteria 27000
112 Ga0495586_0129421 3300046535 Bacteria 1413
113 Ga0495587_0002324 3300046536 Bacteria 12711
114 Ga0495645_0007544 3300046543 Bacteria 7566
115 Ga0495645_0035017 3300046543 Bacteria 3661
116 Ga0495645_0048935 3300046543 Bacteria 3079
117 Ga0495645_0114972 3300046543 Bacteria 1901
118 Ga0495645_0132730 3300046543 Bacteria 1744
119 Ga0495667_0109099 3300046559 Bacteria 1788
120 Ga0495667_0156645 3300046559 Bacteria 1466
121 Ga0495635_0018959 3300046663 Bacteria 4802
122 Ga0495635_0066655 3300046663 Bacteria 2469
123 Ga0495661_0006791 3300046665 Bacteria 8023
124 Ga0495599_0008272 3300046678 Bacteria 6323
125 Ga0495599_0013435 3300046678 Bacteria 5058
126 Ga0495599_0032627 3300046678 Bacteria 3269
127 Ga0495623_0006580 3300046679 Bacteria 7561
128 Ga0495623_0011862 3300046679 Bacteria 5646
129 Ga0495646_0011301 3300046680 Bacteria 5668
130 Ga0495646_0078663 3300046680 Unclassified 1927
131 Ga0495613_0004242 3300046689 Bacteria 10738
132 Ga0495613_0249903 3300046689 Bacteria 1238
133 Ga0495624_0015389 3300046690 Bacteria 5165
134 Ga0495624_0022057 3300046690 Unclassified 4215
135 Ga0495624_0031953 3300046690 Bacteria 3417
136 Ga0495624_0037806 3300046690 Bacteria 3104
137 Ga0495589_0033094 3300046794 Bacteria 2597
138 Ga0495600_0001102 3300046809 Bacteria 14716
139 Ga0495581_0034290 3300047315 Bacteria 2937
140 Ga0495604_0027600 3300047317 Bacteria 4514
141 Ga0495674_0006658 3300047319 Bacteria 11070
142 Ga0495674_0023470 3300047319 Bacteria 5684
143 Ga0495674_0063279 3300047319 Bacteria 3218
144 Ga0495683_0002832 3300047323 Bacteria 10278
145 Ga0495687_044818 3300047443 Bacteria 1919
146 Ga0495675_0025158 3300047444 Bacteria 3796
147 Ga0495675_0035437 3300047444 Bacteria 3187
148 Ga0495673_0006623 3300047469 Bacteria 6789
149 Ga0495684_0000885 3300047471 Bacteria 24252
150 Ga0495684_0101148 3300047471 Bacteria 2179
151 Ga0495593_0003062 3300047673 Bacteria 10073
152 Ga0495602_0006736 3300048088 Bacteria 12057
153 Ga0495602_0007246 3300048088 Bacteria 11613
154 Ga0495602_0045811 3300048088 Bacteria 3955
155 Ga0495614_0012183 3300048089 Bacteria 3775
156 Ga0495614_0077974 3300048089 Unclassified 1433
157 Ga0496107_0095452 3300048910 Bacteria 2176
158 Ga0496107_0098688 3300048910 Bacteria 2139
159 Ga0496115_0020784 3300048918 Bacteria 5065
160 Ga0501035_0080590 3300049822 Unclassified 2874
161 Ga0501044_0000060 3300049823 Bacteria 133279
162 nmdc:mga09592_203099_c1 3300050508 Bacteria 1716
163 nmdc:mga06r32_23036_c2 3300050510 Bacteria 5366

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009177 Ga0105248_10052083 Ga0105248_100520833 329
2 3300025941 Ga0207711_10033507 Ga0207711_100335072 329
3 3300046454 Ga0495592_0000108 Ga0495592_0000108_36853_37842 329
4 3300046476 Ga0495662_0107937 Ga0495662_0107937_102_1091 329
5 3300046477 Ga0495664_0005384 Ga0495664_0005384_1903_2892 329
6 3300046514 Ga0495618_0015213 Ga0495618_0015213_2609_3598 329
7 3300046517 Ga0495630_0072617 Ga0495630_0072617_1543_2532 329
8 3300046533 Ga0495640_0015316 Ga0495640_0015316_4459_5448 329
9 3300046535 Ga0495586_0000387 Ga0495586_0000387_13151_14140 329
10 3300046678 Ga0495599_0013435 Ga0495599_0013435_3704_4693 329
11 3300046689 Ga0495613_0249903 Ga0495613_0249903_35_1027 329
12 3300046690 Ga0495624_0031953 Ga0495624_0031953_1665_2654 329
13 3300037471 Ga0395905_0369837 Ga0395905_0369837_153_1238 331
14 3300046455 Ga0495603_0092902 Ga0495603_0092902_62_1135 334
15 3300046463 Ga0495653_0167872 Ga0495653_0167872_241_1314 334
16 3300046516 Ga0495628_0023865 Ga0495628_0023865_2834_3907 334
17 3300046535 Ga0495586_0129421 Ga0495586_0129421_305_1390 334
18 3300046690 Ga0495624_0037806 Ga0495624_0037806_1301_2374 334
19 3300013105 Ga0157369_10066818 Ga0157369_100668184 342
20 3300046512 Ga0495610_0008128 Ga0495610_0008128_3959_5005 342
21 3300009098 Ga0105245_10162303 Ga0105245_101623033 344
22 3300046511 Ga0495608_0122087 Ga0495608_0122087_589_1623 344
23 3300046680 Ga0495646_0078663 Ga0495646_0078663_19_1053 344
24 3300025934 Ga0207686_10242670 Ga0207686_102426701 345
25 3300048918 Ga0496115_0020784 Ga0496115_0020784_670_1710 345
26 3300042876 Ga0451577_0003269 Ga0451577_0003269_9879_10976 346
27 3300044712 Ga0453684_0009932 Ga0453684_0009932_1309_2406 346
28 3300047315 Ga0495581_0034290 Ga0495581_0034290_1261_2301 346
29 3300046516 Ga0495628_0000042 Ga0495628_0000042_53619_54704 347
30 3300046543 Ga0495645_0007544 Ga0495645_0007544_1512_2597 347
31 3300046543 Ga0495645_0048935 Ga0495645_0048935_580_1653 350
32 3300005340 Ga0070689_100007661 Ga0070689_1000076612 352
33 3300005365 Ga0070688_100043416 Ga0070688_1000434163 352
34 3300025936 Ga0207670_10001176 Ga0207670_100011763 352
35 3300026088 Ga0207641_10051519 Ga0207641_100515192 352
36 3300036647 Ga0316582_0019166 Ga0316582_0019166_1630_2691 352
37 3300036712 Ga0316584_0184746 Ga0316584_0184746_99_1160 352
38 3300044712 Ga0453684_0189574 Ga0453684_0189574_838_1899 352
39 3300045051 Ga0451576_0244619 Ga0451576_0244619_790_1851 352
40 3300005548 Ga0070665_100001117 Ga0070665_10000111714 353
41 3300049822 Ga0501035_0080590 Ga0501035_0080590_908_1969 353
42 3300049823 Ga0501044_0000060 Ga0501044_0000060_44013_45074 353
43 3300006844 Ga0075428_100074851 Ga0075428_1000748513 354
44 3300009147 Ga0114129_10239419 Ga0114129_102394192 354
45 3300005295 Ga0065707_10001077 Ga0065707_1000107711 355
46 3300009098 Ga0105245_10067260 Ga0105245_100672602 355
47 3300035398 Ga0316574_0145363 Ga0316574_0145363_256_1323 355
48 3300013306 Ga0163162_10152362 Ga0163162_101523621 356
49 3300014968 Ga0157379_10183228 Ga0157379_101832283 356
50 3300037471 Ga0395905_0185304 Ga0395905_0185304_20_1090 356
51 3300048910 Ga0496107_0095452 Ga0496107_0095452_469_1542 356
52 3300009094 Ga0111539_10013254 Ga0111539_100132545 358
53 3300027907 Ga0207428_10005436 Ga0207428_100054363 358
54 3300035089 Ga0373944_0071255 Ga0373944_0071255_15_1091 358
55 3300035724 Ga0373933_0102734 Ga0373933_0102734_254_1333 358
56 3300036401 Ga0373937_0070013 Ga0373937_0070013_1309_2388 358
57 3300046543 Ga0495645_0114972 Ga0495645_0114972_25_1101 358
58 3300047471 Ga0495684_0101148 Ga0495684_0101148_317_1396 358
59 3300028800 Ga0265338_10002814 Ga0265338_1000281419 359
60 3300042876 Ga0451577_0002532 Ga0451577_0002532_12328_13407 359
61 3300044712 Ga0453684_0100038 Ga0453684_0100038_2415_3494 359
62 3300044712 Ga0453684_0302470 Ga0453684_0302470_193_1323 359
63 3300046472 Ga0495580_0167476 Ga0495580_0167476_232_1311 359
64 3300046511 Ga0495608_0081953 Ga0495608_0081953_342_1427 359
65 3300046517 Ga0495630_0000749 Ga0495630_0000749_5512_6591 359
66 3300046559 Ga0495667_0156645 Ga0495667_0156645_152_1237 359
67 3300046663 Ga0495635_0066655 Ga0495635_0066655_54_1133 359
68 3300046690 Ga0495624_0022057 Ga0495624_0022057_143_1222 359
69 3300047319 Ga0495674_0006658 Ga0495674_0006658_9096_10175 359
70 3300047471 Ga0495684_0000885 Ga0495684_0000885_14828_15907 359
71 3300048089 Ga0495614_0077974 Ga0495614_0077974_95_1174 359
72 3300006847 Ga0075431_100142605 Ga0075431_1001426052 360
73 3300006880 Ga0075429_100163623 Ga0075429_1001636232 360
74 3300028556 Ga0265337_1000081 Ga0265337_10000819 360
75 3300034816 Ga0373930_0006216 Ga0373930_0006216_243_1328 360
76 3300035084 Ga0373928_0000805 Ga0373928_0000805_1650_2819 360
77 3300035085 Ga0373929_0001256 Ga0373929_0001256_1119_2288 360
78 3300035089 Ga0373944_0012436 Ga0373944_0012436_260_1342 360
79 3300035090 Ga0373949_0000741 Ga0373949_0000741_2450_3619 360
80 3300035091 Ga0373951_0001147 Ga0373951_0001147_1053_2222 360
81 3300035112 Ga0373932_0000002 Ga0373932_0000002_552557_553726 360
82 3300035242 Ga0373962_0000017 Ga0373962_0000017_39568_40737 360
83 3300035691 Ga0373931_0000025 Ga0373931_0000025_79775_80944 360
84 3300035695 Ga0373927_0002391 Ga0373927_0002391_5523_6605 360
85 3300037068 Ga0373925_0000059 Ga0373925_0000059_71699_72781 360
86 3300046543 Ga0495645_0132730 Ga0495645_0132730_76_1158 360
87 3300050508 nmdc:mga09592_203099_c1 nmdc:mga09592_203099_c1_71_1153 360
88 3300050510 nmdc:mga06r32_23036_c2 nmdc:mga06r32_23036_c2_1507_2589 360
89 3300005435 Ga0070714_100032107 Ga0070714_1000321074 361
90 3300025929 Ga0207664_10026408 Ga0207664_100264083 361
91 3300025949 Ga0207667_10141142 Ga0207667_101411423 361
92 3300026078 Ga0207702_10005717 Ga0207702_100057177 361
93 3300042876 Ga0451577_0003759 Ga0451577_0003759_4217_5302 361
94 3300044712 Ga0453684_0226924 Ga0453684_0226924_521_1606 361
95 3300046516 Ga0495628_0193045 Ga0495628_0193045_244_1341 361
96 3300046678 Ga0495599_0032627 Ga0495599_0032627_690_1790 361
97 3300028556 Ga0265337_1015449 Ga0265337_10154492 362
98 3300042876 Ga0451577_0011449 Ga0451577_0011449_4158_5249 362
99 3300044712 Ga0453684_0010413 Ga0453684_0010413_3237_4328 362
100 3300048910 Ga0496107_0098688 Ga0496107_0098688_826_1977 362
101 3300005340 Ga0070689_100049013 Ga0070689_1000490133 363
102 3300005365 Ga0070688_100093827 Ga0070688_1000938272 363
103 3300009093 Ga0105240_10006233 Ga0105240_1000623312 363
104 3300025913 Ga0207695_10020266 Ga0207695_100202663 363
105 3300005842 Ga0068858_100062219 Ga0068858_1000622192 364
106 3300014325 Ga0163163_10000167 Ga0163163_100001678 364
107 3300026035 Ga0207703_10047514 Ga0207703_100475143 364
108 3300006237 Ga0097621_100176589 Ga0097621_1001765892 368
109 3300025938 Ga0207704_10204689 Ga0207704_102046892 368
110 3300013308 Ga0157375_10168672 Ga0157375_101686723 369
111 3300045051 Ga0451576_0071494 Ga0451576_0071494_1683_2795 369
112 iso_pu_bacteria 642555112 642594186 369
113 3300005356 Ga0070674_100129213 Ga0070674_1001292132 370
114 3300005364 Ga0070673_100117305 Ga0070673_1001173052 370
115 3300025940 Ga0207691_10045454 Ga0207691_100454542 370
116 3300002067 JGI24735J21928_10000481 JGI24735J21928_1000048116 371
117 iso_pu_bacteria 641736151 642425020 371
118 3300005548 Ga0070665_100071411 Ga0070665_1000714113 374
119 3300006237 Ga0097621_100214036 Ga0097621_1002140362 374
120 3300013308 Ga0157375_10000072 Ga0157375_1000007264 374
121 3300046454 Ga0495592_0008009 Ga0495592_0008009_5756_6880 374
122 3300046458 Ga0495591_000896 Ga0495591_000896_1804_2928 374
123 3300046459 Ga0495629_0000468 Ga0495629_0000468_5959_7083 374
124 3300046473 Ga0495582_0003195 Ga0495582_0003195_3182_4306 374
125 3300046476 Ga0495662_0069070 Ga0495662_0069070_523_1647 374
126 3300046500 Ga0495596_0004960 Ga0495596_0004960_695_1819 374
127 3300046511 Ga0495608_0040255 Ga0495608_0040255_31_1155 374
128 3300046514 Ga0495618_0002516 Ga0495618_0002516_9891_11015 374
129 3300046517 Ga0495630_0001507 Ga0495630_0001507_7927_9051 374
130 3300046524 Ga0495648_0020860 Ga0495648_0020860_1041_2165 374
131 3300046526 Ga0495666_0013148 Ga0495666_0013148_2919_4043 374
132 3300046531 Ga0495665_0014030 Ga0495665_0014030_1566_2690 374
133 3300046533 Ga0495640_0029045 Ga0495640_0029045_189_1313 374
134 3300046536 Ga0495587_0002324 Ga0495587_0002324_5667_6791 374
135 3300046543 Ga0495645_0035017 Ga0495645_0035017_1237_2454 374
136 3300046559 Ga0495667_0109099 Ga0495667_0109099_484_1608 374
137 3300046663 Ga0495635_0018959 Ga0495635_0018959_688_1812 374
138 3300046665 Ga0495661_0006791 Ga0495661_0006791_6309_7433 374
139 3300046679 Ga0495623_0006580 Ga0495623_0006580_6106_7230 374
140 3300046680 Ga0495646_0011301 Ga0495646_0011301_2175_3299 374
141 3300046689 Ga0495613_0004242 Ga0495613_0004242_7048_8172 374
142 3300046690 Ga0495624_0015389 Ga0495624_0015389_1051_2175 374
143 3300046794 Ga0495589_0033094 Ga0495589_0033094_561_1685 374
144 3300046809 Ga0495600_0001102 Ga0495600_0001102_5239_6363 374
145 3300047319 Ga0495674_0063279 Ga0495674_0063279_456_1580 374
146 3300047323 Ga0495683_0002832 Ga0495683_0002832_2350_3474 374
147 3300047444 Ga0495675_0035437 Ga0495675_0035437_128_1252 374
148 3300047469 Ga0495673_0006623 Ga0495673_0006623_493_1617 374
149 3300047673 Ga0495593_0003062 Ga0495593_0003062_6173_7297 374
150 3300048089 Ga0495614_0012183 Ga0495614_0012183_2527_3651 374
151 3300001979 JGI24740J21852_10042449 JGI24740J21852_100424492 375
152 3300013105 Ga0157369_10105886 Ga0157369_101058862 375
153 3300046459 Ga0495629_0008852 Ga0495629_0008852_4211_5365 375
154 3300046462 Ga0495651_0027531 Ga0495651_0027531_2617_3744 375
155 3300046463 Ga0495653_0035829 Ga0495653_0035829_1980_3107 375
156 3300046516 Ga0495628_0001904 Ga0495628_0001904_14313_15440 375
157 3300046678 Ga0495599_0008272 Ga0495599_0008272_219_1469 375
158 3300046679 Ga0495623_0011862 Ga0495623_0011862_3160_4410 375
159 3300047317 Ga0495604_0027600 Ga0495604_0027600_2159_3409 375
160 3300047319 Ga0495674_0023470 Ga0495674_0023470_4202_5356 375
161 3300047443 Ga0495687_044818 Ga0495687_044818_348_1475 375
162 3300047444 Ga0495675_0025158 Ga0495675_0025158_1988_3238 375
163 3300048088 Ga0495602_0006736 Ga0495602_0006736_8061_9188 375
164 3300048088 Ga0495602_0007246 Ga0495602_0007246_5051_6178 375
165 3300048088 Ga0495602_0045811 Ga0495602_0045811_559_1809 375

Structural Annotation

Top 5 Hits

ID Description Score Start End
5o3x-assembly1.cif.gz_B structural characterization of the fast and promiscuous macrocyclase from plant - apo pcy1 0.7299 206 230
5v3n-assembly1.cif.gz_A-2 structure of s. cerevisiae ulp2-tof2-csm1 complex 0.4797 208 296
3vhx-assembly2.cif.gz_H the crystal structure of arf6-mklp1 (mitotic kinesin-like protein 1) complex 0.4673 206 273
4x7j-assembly1.cif.gz_A co-crystal structure of perk with 2-amino-n-[4-methoxy-3-(trifluoromethyl)phenyl]-4-methyl-3-[2-(methylamino)quinazolin-6-yl]benzamide inhibitor 0.4667 203 247
4cti-assembly2.cif.gz_A escherichia coli envz histidine kinase catalytic part fused to archaeoglobus fulgidus af1503 hamp domain 0.4549 189 243
ID Description Score Start End Superfamily
af_Q54H73_43_283_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7332 199 227 3.40.50.1820
af_I1JSY1_436_727_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.7315 206 230 3.40.50.1820
3njaD02 Mainly Beta;Ribbon;Complement Module; domain 1; 0.7241 206 232 2.10.70.100
af_Q17538_24_127_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7095 205 227 2.60.40.10
3n54B01 Special;Other non-globular;Nuclear Transport Factor 2; Chain: A,;Nutrient germinant receptor protein C, domain 1 0.6569 205 228 6.20.190.10
ID Description Score Start End GO Terms
AF-A0A0S8DIA1-F1-model_v4 Uncharacterized protein 0.8641 67 375
AF-A0A172UF15-F1-model_v4 Uncharacterized protein 0.8641 140 375
AF-A0A0S8DIA1-F1-model_v4 Uncharacterized protein 0.8588 67 375
AF-A0A172UF15-F1-model_v4 Uncharacterized protein 0.8571 140 375
AF-I3IMT9-F1-model_v4 Uncharacterized protein 0.8558 141 375

Feature Viewer

pLDDT pTM Quality
70.39 0.66 Medium
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Predicted Structure (AlphaFold2)

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