F246165

General Info

Members Datasets Scaffolds Average Seq Length
165 129 330 392

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10059923|Ga0157378_100599233
Length 424
Sequence LNSRFNERSHTKAQSTKYKAPMAKLSIRDLDLKGKRVFIRVDFNVPIKDGEVTDDQRIRAAIPTIRYATDAGARVILASHLGRPKGQRVDKYSLAPVAKHLSTLLGKPVAFADDCVGEPATRAADLAKDGDVVLLENLRFHPEEEKNDPTFAAQLASLCDGLYVNDAFGAAHRAHASTAGITRFARQSAAGLLMEKELEYLGRVIENPEHPFVAILGGAKVSDKIPVISALIDRKVDRLLIGGAMAYTFLKVEGFTVGKSLVENDQLETATQIKERCDQSGVALLLPTDHQVVDSYEPVKGSEILAKTIPIEFTNAGHAGMDIGVETVAHFASALQDAKTIIWNGPMGVFEEPPFDQGTIGIAHAVAQAADHGATVVVGGGDSVAAVTKAGVADHITHMSTGGGATLEFLAGEELPGVTALTDK

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
77 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
78 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
79 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
80 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
81 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
85 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
99 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
100 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
101 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
105 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
111 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
124 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
125 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
127 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
128 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.61
Rhizosphere 95.15
Stem 0
Stem Tuber 0
Unclassified 3.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_10059923 3300013297 Unclassified 3397
2 JGI24748J21848_1000022 3300002074 Bacteria 106580
3 JGI24034J26672_10000026 3300002239 Bacteria 109498
4 Ga0065712_10078645 3300005290 Bacteria 3317
5 Ga0070683_100027733 3300005329 Bacteria 5111
6 Ga0070683_100078913 3300005329 Bacteria 3081
7 Ga0070691_10000195 3300005341 Bacteria 20331
8 Ga0070714_100049956 3300005435 Bacteria 3561
9 Ga0070713_100173359 3300005436 Bacteria 1934
10 Ga0070711_100043220 3300005439 Bacteria 3051
11 Ga0070694_100111644 3300005444 Bacteria 1948
12 Ga0070694_100200590 3300005444 Bacteria 1487
13 Ga0070708_100058677 3300005445 Bacteria 3429
14 Ga0070707_100011087 3300005468 Bacteria 8394
15 Ga0070707_100387674 3300005468 Bacteria 1357
16 Ga0070698_100000068 3300005471 Bacteria 76418
17 Ga0070699_100077943 3300005518 Bacteria 2886
18 Ga0070699_100293317 3300005518 Bacteria 1458
19 Ga0070679_100066292 3300005530 Bacteria 3599
20 Ga0070695_100096248 3300005545 Bacteria 1986
21 Ga0070696_100006040 3300005546 Bacteria 8082
22 Ga0070665_100014215 3300005548 Bacteria 7997
23 Ga0070665_100188292 3300005548 Bacteria 2065
24 Ga0070704_100015131 3300005549 Bacteria 4837
25 Ga0068857_100033518 3300005577 Bacteria 4542
26 Ga0068857_100184378 3300005577 Bacteria 1900
27 Ga0068856_100024491 3300005614 Bacteria 5877
28 Ga0068859_100325377 3300005617 Bacteria 1631
29 Ga0068864_100313674 3300005618 Bacteria 1471
30 Ga0068866_10039397 3300005718 Bacteria 2333
31 Ga0068858_100006538 3300005842 Bacteria 11336
32 Ga0081539_10029513 3300005985 Bacteria 3424
33 Ga0097621_100185948 3300006237 Bacteria 1797
34 Ga0075428_100198756 3300006844 Bacteria 2168
35 Ga0075434_100110623 3300006871 Bacteria 2758
36 Ga0075429_100191462 3300006880 Bacteria 1792
37 Ga0075436_100027219 3300006914 Bacteria 3936
38 Ga0097620_100325400 3300006931 Bacteria 1631
39 Ga0099794_10088765 3300007265 Bacteria 1532
40 Ga0105240_10023929 3300009093 Bacteria 8069
41 Ga0111539_10003878 3300009094 Bacteria 19689
42 Ga0111539_10356078 3300009094 Bacteria 1703
43 Ga0105247_10000047 3300009101 Bacteria 151385
44 Ga0114129_10002715 3300009147 Bacteria 24647
45 Ga0114129_10022076 3300009147 Bacteria 9032
46 Ga0114129_10125096 3300009147 Bacteria 3536
47 Ga0114129_10211601 3300009147 Bacteria 2621
48 Ga0105241_10008675 3300009174 Bacteria 7472
49 Ga0105242_10108006 3300009176 Bacteria 2368
50 Ga0105248_10370604 3300009177 Bacteria 1612
51 Ga0105237_10003657 3300009545 Bacteria 18139
52 Ga0105237_10016140 3300009545 Bacteria 7767
53 Ga0105249_10018482 3300009553 Bacteria 6204
54 Ga0105239_10000747 3300010375 Bacteria 46191
55 Ga0105239_10011923 3300010375 Bacteria 9696
56 Ga0105239_10175253 3300010375 Unclassified 2398
57 Ga0105239_10181632 3300010375 Bacteria 2354
58 Ga0157371_10038805 3300013102 Bacteria 3406
59 Ga0157369_10002365 3300013105 Bacteria 22675
60 Ga0157369_10088406 3300013105 Bacteria 3307
61 Ga0157374_10029261 3300013296 Bacteria 4985
62 Ga0157378_10000151 3300013297 Bacteria 65215
63 Ga0157378_10005648 3300013297 Bacteria 10955
64 Ga0157378_10339473 3300013297 Bacteria 1464
65 Ga0157372_10021116 3300013307 Bacteria 7032
66 Ga0157375_10553640 3300013308 Bacteria 1312
67 Ga0157380_10262934 3300014326 Bacteria 1568
68 Ga0213876_10002770 3300021384 Bacteria 10215
69 Ga0207710_10000001 3300025900 Bacteria 1797433
70 Ga0207680_10014817 3300025903 Bacteria 4049
71 Ga0207684_10021585 3300025910 Bacteria 5498
72 Ga0207695_10001608 3300025913 Bacteria 36608
73 Ga0207695_10012806 3300025913 Bacteria 10043
74 Ga0207695_10062946 3300025913 Bacteria 3827
75 Ga0207671_10019161 3300025914 Bacteria 5238
76 Ga0207662_10100435 3300025918 Bacteria 1792
77 Ga0207662_10139602 3300025918 Bacteria 1534
78 Ga0207657_10003910 3300025919 Bacteria 15812
79 Ga0207652_10358513 3300025921 Bacteria 1316
80 Ga0207646_10004552 3300025922 Bacteria 15002
81 Ga0207646_10101442 3300025922 Bacteria 2580
82 Ga0207646_10233582 3300025922 Bacteria 1661
83 Ga0207664_10088056 3300025929 Bacteria 2540
84 Ga0207644_10000285 3300025931 Bacteria 33388
85 Ga0207644_10143501 3300025931 Bacteria 1841
86 Ga0207686_10110619 3300025934 Bacteria 1852
87 Ga0207665_10108337 3300025939 Bacteria 1949
88 Ga0207667_10000761 3300025949 Bacteria 41908
89 Ga0207667_10045322 3300025949 Bacteria 4658
90 Ga0207712_10003081 3300025961 Bacteria 10642
91 Ga0207703_10000867 3300026035 Bacteria 29660
92 Ga0207703_10071280 3300026035 Bacteria 2870
93 Ga0207702_10051496 3300026078 Bacteria 3480
94 Ga0207641_10130030 3300026088 Bacteria 2260
95 Ga0207676_10058864 3300026095 Bacteria 3032
96 Ga0207674_10003758 3300026116 Bacteria 18521
97 Ga0207674_10016981 3300026116 Bacteria 7947
98 Ga0207675_100001958 3300026118 Bacteria 20583
99 Ga0207698_10156902 3300026142 Bacteria 1984
100 Ga0268266_10055975 3300028379 Bacteria 3392
101 Ga0268264_10154875 3300028381 Bacteria 2059
102 Ga0265338_10147741 3300028800 Bacteria 1831
103 Ga0265330_10034126 3300031235 Bacteria 2273
104 Ga0265332_10000082 3300031238 Bacteria 83381
105 Ga0265328_10017572 3300031239 Bacteria 2769
106 Ga0265320_10044843 3300031240 Bacteria 2176
107 Ga0265329_10021636 3300031242 Bacteria 2158
108 Ga0265331_10000163 3300031250 Bacteria 83373
109 Ga0265316_10003354 3300031344 Bacteria 16230
110 Ga0307408_100119114 3300031548 Bacteria 2042
111 Ga0265313_10009878 3300031595 Bacteria 6136
112 Ga0316575_10023904 3300031665 Bacteria 2364
113 Ga0265314_10003952 3300031711 Bacteria 14055
114 Ga0265342_10003281 3300031712 Bacteria 13412
115 Ga0307413_10244116 3300031824 Bacteria 1328
116 Ga0307416_100018060 3300032002 Bacteria 4957
117 Ga0307414_10070657 3300032004 Bacteria 2515
118 Ga0373923_0014119 3300035111 Bacteria 2994
119 Ga0373923_0112838 3300035111 Unclassified 1208
120 Ga0373956_0002835 3300035119 Bacteria 7011
121 Ga0373955_0034158 3300035172 Bacteria 2683
122 Ga0316574_0016584 3300035398 Bacteria 4296
123 Ga0373927_0061051 3300035695 Bacteria 2439
124 Ga0373937_0001212 3300036401 Bacteria 21715
125 Ga0373937_0019218 3300036401 Bacteria 6117
126 Ga0395905_0021014 3300037471 Bacteria 6181
127 Ga0400490_54982 3300038726 Bacteria 23648
128 Ga0400491_16422 3300038727 Bacteria 2605
129 Ga0400486_29952 3300038742 Bacteria 1926
130 Ga0242420_005507 3300038996 Bacteria 1967
131 Ga0436365_0828078 3300039437 Bacteria 3559
132 Ga0436365_1893255 3300039437 Bacteria 8837
133 Ga0436363_1275085 3300039450 Bacteria 1728
134 Ga0451807_2651303 3300041486 Bacteria 1292
135 Ga0439446_0018912 3300042156 Bacteria 1934
136 Ga0453683_0007766 3300044673 Bacteria 7251
137 Ga0453683_0042438 3300044673 Bacteria 2855
138 Ga0466964_0067158 3300044706 Bacteria 1507
139 Ga0453684_0195613 3300044712 Bacteria 2362
140 Ga0451576_0002431 3300045051 Bacteria 27837
141 Ga0451576_0108070 3300045051 Bacteria 2895
142 Ga0451576_0116061 3300045051 Bacteria 2787
143 Ga0451576_0548804 3300045051 Bacteria 1214
144 Ga0495580_0058018 3300046472 Unclassified 2724
145 Ga0495662_0019710 3300046476 Bacteria 3263
146 Ga0495628_0157564 3300046516 Bacteria 1727
147 Ga0501034_0098534 3300049571 Bacteria 2919
148 Ga0501034_0130279 3300049571 Bacteria 2499
149 Ga0501040_0097202 3300049576 Bacteria 2051
150 Ga0501046_0070608 3300049580 Bacteria 2715
151 Ga0501048_0096418 3300049582 Bacteria 2086
152 Ga0501230_014615 3300049667 Unclassified 1291
153 Ga0501081_0146393 3300049743 Bacteria 1695
154 Ga0501045_0061990 3300049824 Bacteria 2744
155 nmdc:mga05p37_115286_c1 3300050507 Bacteria 3303
156 nmdc:mga05p37_864_c1 3300050507 Bacteria 34088
157 nmdc:mga08y16_86150_c1 3300050511 Bacteria 3274
158 nmdc:mga0n895_40124_c1 3300050512 Bacteria 4546
159 nmdc:mga0rr50_6828_c1 3300050513 Bacteria 6994
160 nmdc:mga0a205_483180_c1 3300050515 Bacteria 1097
161 Ga0495655_0017757 3300053083 Bacteria 1554
162 Ga0501084_0129121 3300054114 Bacteria 2127
163 Ga0590071_002345 3300059421 Bacteria 4783
164 Ga0590075_002268 3300059424 Bacteria 4623
165 Ga0590077_000261 3300059426 Bacteria 15066
166 Ga0157378_10059923
167 JGI24748J21848_1000022
168 JGI24034J26672_10000026
169 Ga0065712_10078645
170 Ga0070683_100027733
171 Ga0070683_100078913
172 Ga0070691_10000195
173 Ga0070714_100049956
174 Ga0070713_100173359
175 Ga0070711_100043220
176 Ga0070694_100111644
177 Ga0070694_100200590
178 Ga0070708_100058677
179 Ga0070707_100011087
180 Ga0070707_100387674
181 Ga0070698_100000068
182 Ga0070699_100077943
183 Ga0070699_100293317
184 Ga0070679_100066292
185 Ga0070695_100096248
186 Ga0070696_100006040
187 Ga0070665_100014215
188 Ga0070665_100188292
189 Ga0070704_100015131
190 Ga0068857_100033518
191 Ga0068857_100184378
192 Ga0068856_100024491
193 Ga0068859_100325377
194 Ga0068864_100313674
195 Ga0068866_10039397
196 Ga0068858_100006538
197 Ga0081539_10029513
198 Ga0097621_100185948
199 Ga0075428_100198756
200 Ga0075434_100110623
201 Ga0075429_100191462
202 Ga0075436_100027219
203 Ga0097620_100325400
204 Ga0099794_10088765
205 Ga0105240_10023929
206 Ga0111539_10003878
207 Ga0111539_10356078
208 Ga0105247_10000047
209 Ga0114129_10002715
210 Ga0114129_10022076
211 Ga0114129_10125096
212 Ga0114129_10211601
213 Ga0105241_10008675
214 Ga0105242_10108006
215 Ga0105248_10370604
216 Ga0105237_10003657
217 Ga0105237_10016140
218 Ga0105249_10018482
219 Ga0105239_10000747
220 Ga0105239_10011923
221 Ga0105239_10175253
222 Ga0105239_10181632
223 Ga0157371_10038805
224 Ga0157369_10002365
225 Ga0157369_10088406
226 Ga0157374_10029261
227 Ga0157378_10000151
228 Ga0157378_10005648
229 Ga0157378_10339473
230 Ga0157372_10021116
231 Ga0157375_10553640
232 Ga0157380_10262934
233 Ga0213876_10002770
234 Ga0207710_10000001
235 Ga0207680_10014817
236 Ga0207684_10021585
237 Ga0207695_10001608
238 Ga0207695_10012806
239 Ga0207695_10062946
240 Ga0207671_10019161
241 Ga0207662_10100435
242 Ga0207662_10139602
243 Ga0207657_10003910
244 Ga0207652_10358513
245 Ga0207646_10004552
246 Ga0207646_10101442
247 Ga0207646_10233582
248 Ga0207664_10088056
249 Ga0207644_10000285
250 Ga0207644_10143501
251 Ga0207686_10110619
252 Ga0207665_10108337
253 Ga0207667_10000761
254 Ga0207667_10045322
255 Ga0207712_10003081
256 Ga0207703_10000867
257 Ga0207703_10071280
258 Ga0207702_10051496
259 Ga0207641_10130030
260 Ga0207676_10058864
261 Ga0207674_10003758
262 Ga0207674_10016981
263 Ga0207675_100001958
264 Ga0207698_10156902
265 Ga0268266_10055975
266 Ga0268264_10154875
267 Ga0265338_10147741
268 Ga0265330_10034126
269 Ga0265332_10000082
270 Ga0265328_10017572
271 Ga0265320_10044843
272 Ga0265329_10021636
273 Ga0265331_10000163
274 Ga0265316_10003354
275 Ga0307408_100119114
276 Ga0265313_10009878
277 Ga0316575_10023904
278 Ga0265314_10003952
279 Ga0265342_10003281
280 Ga0307413_10244116
281 Ga0307416_100018060
282 Ga0307414_10070657
283 Ga0373923_0014119
284 Ga0373923_0112838
285 Ga0373956_0002835
286 Ga0373955_0034158
287 Ga0316574_0016584
288 Ga0373927_0061051
289 Ga0373937_0001212
290 Ga0373937_0019218
291 Ga0395905_0021014
292 Ga0400490_54982
293 Ga0400491_16422
294 Ga0400486_29952
295 Ga0242420_005507
296 Ga0436365_0828078
297 Ga0436365_1893255
298 Ga0436363_1275085
299 Ga0451807_2651303
300 Ga0439446_0018912
301 Ga0453683_0007766
302 Ga0453683_0042438
303 Ga0466964_0067158
304 Ga0453684_0195613
305 Ga0451576_0002431
306 Ga0451576_0108070
307 Ga0451576_0116061
308 Ga0451576_0548804
309 Ga0495580_0058018
310 Ga0495662_0019710
311 Ga0495628_0157564
312 Ga0501034_0098534
313 Ga0501034_0130279
314 Ga0501040_0097202
315 Ga0501046_0070608
316 Ga0501048_0096418
317 Ga0501230_014615
318 Ga0501081_0146393
319 Ga0501045_0061990
320 nmdc:mga05p37_115286_c1
321 nmdc:mga05p37_864_c1
322 nmdc:mga08y16_86150_c1
323 nmdc:mga0n895_40124_c1
324 nmdc:mga0rr50_6828_c1
325 nmdc:mga0a205_483180_c1
326 Ga0495655_0017757
327 Ga0501084_0129121
328 Ga0590071_002345
329 Ga0590075_002268
330 Ga0590077_000261

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00162

PGK

Phosphoglycerate kinase

27

413

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v6s-assembly2.cif.gz_B crystal structure of phosphoglycerate kinase from thermus thermophilus hb8 0.9185 4 407
3uwd-assembly1.cif.gz_A crystal structure of phosphoglycerate kinase from bacillus anthracis 0.9148 1 410
1php-assembly1.cif.gz_A structure of the adp complex of the 3-phosphoglycerate kinase from bacillus stearothermophilus at 1.65 angstroms 0.9136 1 410
3uwd-assembly1.cif.gz_A crystal structure of phosphoglycerate kinase from bacillus anthracis 0.9125 1 410
1php-assembly1.cif.gz_A structure of the adp complex of the 3-phosphoglycerate kinase from bacillus stearothermophilus at 1.65 angstroms 0.9113 1 410
ID Description Score Start End Superfamily
af_A0A0P0V994_190_315_3.40.50.1260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9651 203 332 3.40.50.1260
3q3vB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9553 197 387 3.40.50.1260
af_A0A0P0V994_190_315_3.40.50.1260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9503 203 332 3.40.50.1260
af_A0A1D6FSN1_4_156_3.40.50.1260 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9464 245 388 3.40.50.1260
1hdiA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain 0.9424 196 385 3.40.50.1260
ID Description Score Start End GO Terms
AF-A0A382Y1K5-F1-model_v4 phosphoglycerate kinase (EC 2.7.2.3) 0.9833 3 195 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531
AF-A0A534R9Q6-F1-model_v4 Phosphoglycerate kinase (EC 2.7.2.3) 0.9788 6 162 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531
AF-A0A7V5Y5C1-F1-model_v4 Phosphoglycerate kinase (EC 2.7.2.3) 0.9781 6 147 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531
AF-K2AFZ1-F1-model_v4 Phosphoglycerate kinase (EC 2.7.2.3) 0.9699 1 181 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531
AF-A0A7C4FLR6-F1-model_v4 Phosphoglycerate kinase (EC 2.7.2.3) 0.9683 6 155 GO:0004618
GO:0005524
GO:0005829
GO:0006094
GO:0006096
GO:0043531

Map