F245587

General Info

Members Datasets Scaffolds Average Seq Length
165 142 152 560

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100149931|Ga0070708_1001499311
Length 657
Sequence MDTTAQHESIVPQLSSQGGYFFVSYRRAQFGNGEERPTGLLIHNEPRRCGCFELDARRGMIEIRGETMKPSYTHGVSDVPLIGKTIGDWLDDIAGEFAANEALVSVFENQRFSYAAFLDEVNRCARALMALGVQKGDRVGIWSTNCVAWMVVQFATAKIGAVLVNINPAYRLHELKFALQQSECNVLISGEGFKDADYVAMLHQLVPELASADPGKDVRSEKFPHLRRLVFLGEATESATGPLPALSHPMGEGGRRPGEGKPGMLSWSEVLTCAERVAPDALAERQASLDFDDVINIQYTSGTTGFPKGAMLTHHNILNNGFWIGERMRFTHCDRLCIPVPFYHCFGMVLGNLACVTHGATMVLPAPHFSPVHTLQSVAQERCTALHGVPTMFIAELDHPQFREFDLSSLRTGIMAGAPCPVEVMKRVMTEMHCREITIACGMTETSPVCNMTEVDDPIELRVRSVGKVMPHQEQKIIDPTTGEVLSRGEHGELCYRGYHVMRGYYNNPEGTKQTIDEAGWLHGGDLAVMDEQGYVRITGRLKDMICRGGEKIFPREVEEFLFTHPKIAEAYVIGVPDTYYGEQVIAWVKLKEDATMSAAEVQAFCHGQIMDYKIPRRVKFVAEFPTTVTGKIQKFRMREISTRELGLENVVKTGAG

Samples

Sample ID Description Type Environment
1 2511231008 Pseudomonas sp. GM21 Isolate Nodule
2 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
3 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
4 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
5 2738543012 Acidovorax sp. CF301 Isolate Unclassified
6 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
7 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
8 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
9 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
10 2919085039 Luteibacter sp. 1214 Isolate Unclassified
11 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
12 2941471342 Luteibacter sp. 621 Isolate Unclassified
13 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
14 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
27 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
28 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
29 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
41 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
47 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
48 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
63 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
64 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
86 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
110 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
113 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
114 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
115 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
123 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
127 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.12
Metatranscriptomes 0
Isolates 7.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.82
Nodule 1.82
Rhizoplane 3.64
Rhizosphere 82.42
Stem 0
Stem Tuber 0
Unclassified 10.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1002390 3300001904 Bacteria 3313
2 JGI24738J21930_10000516 3300002075 Bacteria 11035
3 Ga0055531_10003343 3300003794 Bacteria 10266
4 Ga0070658_10108801 3300005327 Bacteria 2295
5 Ga0070683_100110044 3300005329 Bacteria 2598
6 Ga0070670_100011572 3300005331 Bacteria 7542
7 Ga0070670_100016370 3300005331 Bacteria 6368
8 Ga0070666_10008124 3300005335 Bacteria 6499
9 Ga0070680_100012488 3300005336 Bacteria 6601
10 Ga0070687_100016617 3300005343 Bacteria 3362
11 Ga0070675_100003345 3300005354 Bacteria 12142
12 Ga0070675_100011984 3300005354 Bacteria 6794
13 Ga0070675_100023557 3300005354 Bacteria 4925
14 Ga0070671_100031165 3300005355 Bacteria 4404
15 Ga0070671_100107200 3300005355 Bacteria 2346
16 Ga0070673_100018515 3300005364 Bacteria 4977
17 Ga0070659_100004523 3300005366 Bacteria 9934
18 Ga0070703_10002943 3300005406 Bacteria 4872
19 Ga0070709_10005778 3300005434 Bacteria 6707
20 Ga0070711_100099540 3300005439 Bacteria 2112
21 Ga0070705_100000567 3300005440 Bacteria 21398
22 Ga0070694_100001600 3300005444 Bacteria 13292
23 Ga0070708_100149931 3300005445 Bacteria 2168
24 Ga0070678_100093426 3300005456 Bacteria 2313
25 Ga0070662_100002250 3300005457 Bacteria 11839
26 Ga0070706_100044684 3300005467 Bacteria 4092
27 Ga0070699_100042542 3300005518 Bacteria 3932
28 Ga0070679_100012641 3300005530 Bacteria 8075
29 Ga0070697_100053406 3300005536 Bacteria 3284
30 Ga0070672_100000951 3300005543 Bacteria 17441
31 Ga0070695_100001439 3300005545 Bacteria 13203
32 Ga0070696_100000455 3300005546 Bacteria 25623
33 Ga0070693_100000054 3300005547 Bacteria 43910
34 Ga0070665_100007020 3300005548 Bacteria 11443
35 Ga0070665_100031872 3300005548 Bacteria 5306
36 Ga0070664_100016584 3300005564 Bacteria 6042
37 Ga0068852_100144652 3300005616 Bacteria 2204
38 Ga0068870_10069209 3300005840 Bacteria 1920
39 Ga0079104_1000004 3300006946 Bacteria 444549
40 Ga0099795_10000620 3300007788 Bacteria 6831
41 Ga0105250_10001906 3300009092 Bacteria 10827
42 Ga0111539_10093772 3300009094 Bacteria 3526
43 Ga0105245_10101942 3300009098 Bacteria 2658
44 Ga0105243_10005282 3300009148 Bacteria 10098
45 Ga0105248_10097062 3300009177 Bacteria 3320
46 Ga0105237_10028200 3300009545 Bacteria 5722
47 Ga0099796_10001611 3300010159 Bacteria 4644
48 Ga0105239_10001675 3300010375 Bacteria 29217
49 Ga0105239_10191982 3300010375 Bacteria 2286
50 Ga0105239_10206617 3300010375 Bacteria 2200
51 Ga0157370_10000224 3300013104 Bacteria 71976
52 Ga0157370_10013158 3300013104 Bacteria 8533
53 Ga0157370_10061604 3300013104 Bacteria 3560
54 Ga0157369_10001932 3300013105 Bacteria 24976
55 Ga0157375_10000016 3300013308 Bacteria 295002
56 Ga0157375_10014862 3300013308 Bacteria 6957
57 Ga0163163_10000049 3300014325 Bacteria 130036
58 Ga0157380_10056251 3300014326 Bacteria 3128
59 Ga0182008_10003471 3300014497 Bacteria 9509
60 Ga0182006_1000098 3300015261 Bacteria 101707
61 Ga0182005_1000015 3300015265 Bacteria 387565
62 Ga0182005_1001334 3300015265 Bacteria 10082
63 Ga0209676_1004399 3300025292 Bacteria 7869
64 Ga0209257_1000877 3300025304 Bacteria 42562
65 Ga0207696_1002115 3300025711 Bacteria 9981
66 Ga0207647_10000005 3300025904 Bacteria 223490
67 Ga0207699_10015779 3300025906 Bacteria 3934
68 Ga0207684_10013380 3300025910 Bacteria 7097
69 Ga0207684_10029395 3300025910 Bacteria 4681
70 Ga0207671_10031222 3300025914 Bacteria 3969
71 Ga0207662_10025099 3300025918 Bacteria 3432
72 Ga0207681_10021198 3300025923 Bacteria 4128
73 Ga0207650_10013267 3300025925 Bacteria 5701
74 Ga0207650_10017189 3300025925 Bacteria 5062
75 Ga0207659_10001027 3300025926 Bacteria 16603
76 Ga0207690_10088339 3300025932 Bacteria 2183
77 Ga0207706_10005418 3300025933 Bacteria 11894
78 Ga0207709_10009455 3300025935 Bacteria 5363
79 Ga0207670_10070108 3300025936 Bacteria 2420
80 Ga0207691_10002269 3300025940 Bacteria 18838
81 Ga0207711_10026649 3300025941 Bacteria 4851
82 Ga0207651_10009265 3300025960 Bacteria 5376
83 Ga0207658_10013869 3300025986 Bacteria 5515
84 Ga0207703_10076222 3300026035 Bacteria 2781
85 Ga0207641_10195006 3300026088 Bacteria 1864
86 Ga0209281_1000005 3300027111 Bacteria 1242284
87 Ga0209179_1001258 3300027512 Bacteria 3035
88 Ga0268266_10091378 3300028379 Bacteria 2669
89 Ga0307512_10007463 3300030522 Eukaryota 10842
90 Ga0307508_10001444 3300031616 Eukaryota 26745
91 Ga0316575_10001477 3300031665 Bacteria 7581
92 Ga0307516_10000986 3300031730 Eukaryota 39341
93 Ga0307405_10011993 3300031731 Bacteria 4567
94 Ga0307412_10003348 3300031911 Bacteria 8903
95 Ga0307412_10025990 3300031911 Bacteria 3634
96 Ga0307416_100002442 3300032002 Bacteria 10674
97 Ga0307415_100003332 3300032126 Bacteria 8155
98 Ga0316574_0013147 3300035398 Bacteria 4753
99 Ga0316574_0030142 3300035398 Bacteria 3283
100 Ga0373927_0000566 3300035695 Bacteria 28233
101 Ga0373933_0003449 3300035724 Bacteria 8800
102 Ga0373937_0000074 3300036401 Bacteria 91289
103 Ga0373925_0000881 3300037068 Bacteria 27431
104 Ga0395899_0000918 3300037312 Bacteria 27694
105 Ga0436364_1561789 3300037853 Bacteria 2218
106 Ga0395901_0111122 3300038443 Bacteria 2878
107 Ga0436361_1065580 3300039447 Bacteria 12575
108 Ga0439436_0000003 3300041404 Bacteria 186684
109 Ga0439465_0009178 3300041413 Bacteria 3116
110 Ga0439462_0004886 3300042015 Bacteria 3290
111 Ga0466970_0007835 3300044765 Bacteria 5362
112 Ga0495617_000031 3300046452 Bacteria 151115
113 Ga0495650_0001657 3300046471 Bacteria 20596
114 Ga0495607_0023594 3300046501 Bacteria 3848
115 Ga0495606_0000859 3300046507 Bacteria 45541
116 Ga0495606_0001351 3300046507 Bacteria 33295
117 Ga0495606_0018011 3300046507 Bacteria 5312
118 Ga0495606_0079407 3300046507 Bacteria 2043
119 Ga0495610_0005276 3300046512 Bacteria 9243
120 Ga0495620_0000403 3300046515 Bacteria 28921
121 Ga0495631_0000195 3300046518 Bacteria 41629
122 Ga0495632_0000005 3300046519 Bacteria 362872
123 Ga0495632_0012981 3300046519 Bacteria 4775
124 Ga0495648_0003793 3300046524 Bacteria 13144
125 Ga0495587_0001511 3300046536 Bacteria 15478
126 Ga0495611_0000049 3300046648 Bacteria 85148
127 Ga0495625_0027391 3300046660 Bacteria 4291
128 Ga0495658_0008193 3300046683 Bacteria 5178
129 Ga0495669_0002050 3300046684 Bacteria 8260
130 Ga0495669_0007927 3300046684 Bacteria 4458
131 Ga0495670_0001742 3300046691 Bacteria 10707
132 Ga0495687_000160 3300047443 Bacteria 100989
133 Ga0495675_0004169 3300047444 Bacteria 8743
134 Ga0495673_0000045 3300047469 Bacteria 280765
135 Ga0495673_0033555 3300047469 Bacteria 2381
136 Ga0495681_0000838 3300047470 Bacteria 23671
137 Ga0495686_0001392 3300047472 Bacteria 26810
138 Ga0495686_0033407 3300047472 Bacteria 3321
139 Ga0495602_0000069 3300048088 Bacteria 101160
140 Ga0496101_0000679 3300048904 Bacteria 20546
141 Ga0496102_0000895 3300048905 Bacteria 28264
142 Ga0496109_0022207 3300048912 Bacteria 5619
143 Ga0496110_0016153 3300048913 Bacteria 6225
144 Ga0496111_0018863 3300048914 Bacteria 4783
145 Ga0496115_0113376 3300048918 Bacteria 2228
146 Ga0496118_0003667 3300048921 Bacteria 19069
147 Ga0496121_0000464 3300048924 Bacteria 79337
148 Ga0496122_0025519 3300048925 Bacteria 5129
149 Ga0496123_0011479 3300048926 Bacteria 7674
150 Ga0496123_0024551 3300048926 Bacteria 4578
151 Ga0496125_0004172 3300048928 Bacteria 16849
152 Ga0496126_0007366 3300048929 Bacteria 12074

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005548 Ga0070665_100007020 Ga0070665_1000070208 529
2 3300005354 Ga0070675_100003345 Ga0070675_1000033455 531
3 3300005840 Ga0068870_10069209 Ga0068870_100692092 531
4 3300025926 Ga0207659_10001027 Ga0207659_1000102712 531
5 3300010375 Ga0105239_10206617 Ga0105239_102066172 533
6 3300009545 Ga0105237_10028200 Ga0105237_100282003 535
7 3300025914 Ga0207671_10031222 Ga0207671_100312222 535
8 3300026035 Ga0207703_10076222 Ga0207703_100762221 535
9 3300046660 Ga0495625_0027391 Ga0495625_0027391_27_1637 536
10 iso_pu_bacteria 2852673933 2852676731 537
11 iso_pu_bacteria 2928510474 2928512883 537
12 3300014325 Ga0163163_10000049 Ga0163163_1000004918 539
13 3300030522 Ga0307512_10007463 Ga0307512_100074634 540
14 3300031616 Ga0307508_10001444 Ga0307508_100014445 540
15 3300031730 Ga0307516_10000986 Ga0307516_100009865 540
16 iso_pu_bacteria 8057632132 8057634733 540
17 3300005439 Ga0070711_100099540 Ga0070711_1000995401 541
18 3300048918 Ga0496115_0113376 Ga0496115_0113376_223_1863 541
19 3300005329 Ga0070683_100110044 Ga0070683_1001100442 543
20 3300005616 Ga0068852_100144652 Ga0068852_1001446521 543
21 3300003794 Ga0055531_10003343 Ga0055531_100033432 544
22 3300025292 Ga0209676_1004399 Ga0209676_10043992 544
23 3300025304 Ga0209257_1000877 Ga0209257_100087729 544
24 3300031911 Ga0307412_10025990 Ga0307412_100259902 544
25 3300037853 Ga0436364_1561789 Ga0436364_1561789_50_1699 544
26 3300005355 Ga0070671_100107200 Ga0070671_1001072002 545
27 3300042015 Ga0439462_0004886 Ga0439462_0004886_283_1923 545
28 3300046684 Ga0495669_0007927 Ga0495669_0007927_820_2460 545
29 3300025936 Ga0207670_10070108 Ga0207670_100701081 548
30 3300005327 Ga0070658_10108801 Ga0070658_101088012 549
31 3300005331 Ga0070670_100016370 Ga0070670_1000163705 549
32 3300005335 Ga0070666_10008124 Ga0070666_100081242 549
33 3300005354 Ga0070675_100023557 Ga0070675_1000235572 549
34 3300005355 Ga0070671_100031165 Ga0070671_1000311652 549
35 3300005364 Ga0070673_100018515 Ga0070673_1000185152 549
36 3300005366 Ga0070659_100004523 Ga0070659_1000045232 549
37 3300005456 Ga0070678_100093426 Ga0070678_1000934262 549
38 3300005457 Ga0070662_100002250 Ga0070662_10000225012 549
39 3300005543 Ga0070672_100000951 Ga0070672_10000095122 549
40 3300005548 Ga0070665_100031872 Ga0070665_1000318722 549
41 3300005564 Ga0070664_100016584 Ga0070664_1000165843 549
42 3300009177 Ga0105248_10097062 Ga0105248_100970623 549
43 3300013308 Ga0157375_10014862 Ga0157375_100148622 549
44 3300025923 Ga0207681_10021198 Ga0207681_100211982 549
45 3300025925 Ga0207650_10017189 Ga0207650_100171895 549
46 3300025932 Ga0207690_10088339 Ga0207690_100883391 549
47 3300025933 Ga0207706_10005418 Ga0207706_1000541812 549
48 3300025940 Ga0207691_10002269 Ga0207691_100022695 549
49 3300025941 Ga0207711_10026649 Ga0207711_100266494 549
50 3300025960 Ga0207651_10009265 Ga0207651_100092653 549
51 3300025986 Ga0207658_10013869 Ga0207658_100138693 549
52 3300028379 Ga0268266_10091378 Ga0268266_100913783 549
53 3300032002 Ga0307416_100002442 Ga0307416_1000024421 549
54 3300032126 Ga0307415_100003332 Ga0307415_1000033324 549
55 3300046684 Ga0495669_0002050 Ga0495669_0002050_4316_5974 549
56 3300048912 Ga0496109_0022207 Ga0496109_0022207_3647_5305 549
57 3300048913 Ga0496110_0016153 Ga0496110_0016153_3192_4850 549
58 3300048914 Ga0496111_0018863 Ga0496111_0018863_2766_4424 549
59 3300009094 Ga0111539_10093772 Ga0111539_100937722 550
60 3300005354 Ga0070675_100011984 Ga0070675_1000119842 551
61 3300009092 Ga0105250_10001906 Ga0105250_100019064 551
62 3300014326 Ga0157380_10056251 Ga0157380_100562512 551
63 3300025711 Ga0207696_1002115 Ga0207696_10021157 551
64 iso_pu_bacteria 2511231008 2511278462 554
65 3300010159 Ga0099796_10001611 Ga0099796_100016112 555
66 3300027512 Ga0209179_1001258 Ga0209179_10012583 555
67 iso_pu_bacteria 2513020051 2513231970 555
68 iso_pu_bacteria 2643221603 2644025995 555
69 iso_pu_bacteria 2718218334 2721029243 555
70 iso_pu_bacteria 2738543012 2739245592 555
71 iso_pu_bacteria 2842914999 2842916832 555
72 iso_pu_bacteria 2842918807 2842922306 555
73 iso_pu_bacteria 2919085039 2919088114 555
74 3300026088 Ga0207641_10195006 Ga0207641_101950061 556
75 iso_pu_bacteria 2941471342 2941475279 556
76 3300005331 Ga0070670_100011572 Ga0070670_1000115722 557
77 3300005343 Ga0070687_100016617 Ga0070687_1000166172 557
78 3300005536 Ga0070697_100053406 Ga0070697_1000534063 557
79 3300007788 Ga0099795_10000620 Ga0099795_100006203 557
80 3300009098 Ga0105245_10101942 Ga0105245_101019421 557
81 3300010375 Ga0105239_10001675 Ga0105239_1000167514 557
82 3300013308 Ga0157375_10000016 Ga0157375_10000016218 557
83 3300025918 Ga0207662_10025099 Ga0207662_100250992 557
84 3300025925 Ga0207650_10013267 Ga0207650_100132673 557
85 3300035695 Ga0373927_0000566 Ga0373927_0000566_19591_21294 557
86 3300037068 Ga0373925_0000881 Ga0373925_0000881_20264_21967 557
87 3300039447 Ga0436361_1065580 Ga0436361_1065580_9068_10756 557
88 3300046683 Ga0495658_0008193 Ga0495658_0008193_3471_5165 557
89 3300048926 Ga0496123_0011479 Ga0496123_0011479_4234_5907 557
90 3300035398 Ga0316574_0030142 Ga0316574_0030142_1557_3263 558
91 3300046507 Ga0495606_0000859 Ga0495606_0000859_2807_4492 558
92 3300046519 Ga0495632_0000005 Ga0495632_0000005_120592_122268 558
93 3300046519 Ga0495632_0012981 Ga0495632_0012981_1400_3085 558
94 3300047443 Ga0495687_000160 Ga0495687_000160_68825_70510 558
95 3300047470 Ga0495681_0000838 Ga0495681_0000838_14527_16212 558
96 3300002075 JGI24738J21930_10000516 JGI24738J21930_100005163 559
97 3300006946 Ga0079104_1000004 Ga0079104_1000004219 559
98 3300009148 Ga0105243_10005282 Ga0105243_100052827 559
99 3300010375 Ga0105239_10191982 Ga0105239_101919822 559
100 3300013104 Ga0157370_10000224 Ga0157370_1000022438 559
101 3300015265 Ga0182005_1000015 Ga0182005_1000015218 559
102 3300025935 Ga0207709_10009455 Ga0207709_100094555 559
103 3300027111 Ga0209281_1000005 Ga0209281_1000005428 559
104 3300031731 Ga0307405_10011993 Ga0307405_100119932 559
105 3300031911 Ga0307412_10003348 Ga0307412_100033485 559
106 3300037312 Ga0395899_0000918 Ga0395899_0000918_18983_20677 559
107 3300041404 Ga0439436_0000003 Ga0439436_0000003_109583_111262 559
108 3300041413 Ga0439465_0009178 Ga0439465_0009178_901_2586 559
109 3300044765 Ga0466970_0007835 Ga0466970_0007835_3636_5330 559
110 3300046452 Ga0495617_000031 Ga0495617_000031_135098_136777 559
111 3300046471 Ga0495650_0001657 Ga0495650_0001657_1476_3155 559
112 3300046501 Ga0495607_0023594 Ga0495607_0023594_1172_2851 559
113 3300046507 Ga0495606_0001351 Ga0495606_0001351_27637_29316 559
114 3300046507 Ga0495606_0018011 Ga0495606_0018011_510_2204 559
115 3300046507 Ga0495606_0079407 Ga0495606_0079407_89_1768 559
116 3300046512 Ga0495610_0005276 Ga0495610_0005276_5962_7641 559
117 3300046515 Ga0495620_0000403 Ga0495620_0000403_13281_14960 559
118 3300046518 Ga0495631_0000195 Ga0495631_0000195_23499_25178 559
119 3300046524 Ga0495648_0003793 Ga0495648_0003793_8811_10490 559
120 3300046648 Ga0495611_0000049 Ga0495611_0000049_2630_4309 559
121 3300047469 Ga0495673_0000045 Ga0495673_0000045_198668_200347 559
122 3300047469 Ga0495673_0033555 Ga0495673_0033555_248_1927 559
123 3300047472 Ga0495686_0001392 Ga0495686_0001392_14505_16184 559
124 3300047472 Ga0495686_0033407 Ga0495686_0033407_370_2049 559
125 3300048904 Ga0496101_0000679 Ga0496101_0000679_10537_12216 559
126 3300048905 Ga0496102_0000895 Ga0496102_0000895_696_2387 559
127 3300001904 JGI24736J21556_1002390 JGI24736J21556_10023901 560
128 3300005336 Ga0070680_100012488 Ga0070680_1000124883 560
129 3300005406 Ga0070703_10002943 Ga0070703_100029434 560
130 3300005434 Ga0070709_10005778 Ga0070709_100057784 560
131 3300005440 Ga0070705_100000567 Ga0070705_1000005672 560
132 3300005444 Ga0070694_100001600 Ga0070694_1000016004 560
133 3300005445 Ga0070708_100149931 Ga0070708_1001499311 560
134 3300005467 Ga0070706_100044684 Ga0070706_1000446842 560
135 3300005518 Ga0070699_100042542 Ga0070699_1000425423 560
136 3300005530 Ga0070679_100012641 Ga0070679_1000126415 560
137 3300005545 Ga0070695_100001439 Ga0070695_1000014399 560
138 3300005546 Ga0070696_100000455 Ga0070696_10000045517 560
139 3300005547 Ga0070693_100000054 Ga0070693_10000005418 560
140 3300013104 Ga0157370_10013158 Ga0157370_100131583 560
141 3300013104 Ga0157370_10061604 Ga0157370_100616043 560
142 3300013105 Ga0157369_10001932 Ga0157369_1000193216 560
143 3300014497 Ga0182008_10003471 Ga0182008_100034717 560
144 3300015261 Ga0182006_1000098 Ga0182006_100009834 560
145 3300015265 Ga0182005_1001334 Ga0182005_10013343 560
146 3300025904 Ga0207647_10000005 Ga0207647_100000058 560
147 3300025906 Ga0207699_10015779 Ga0207699_100157792 560
148 3300025910 Ga0207684_10013380 Ga0207684_100133802 560
149 3300025910 Ga0207684_10029395 Ga0207684_100293952 560
150 3300031665 Ga0316575_10001477 Ga0316575_100014773 560
151 3300035398 Ga0316574_0013147 Ga0316574_0013147_338_2071 560
152 3300035724 Ga0373933_0003449 Ga0373933_0003449_3662_5371 560
153 3300036401 Ga0373937_0000074 Ga0373937_0000074_42842_44551 560
154 3300038443 Ga0395901_0111122 Ga0395901_0111122_923_2728 560
155 3300046536 Ga0495587_0001511 Ga0495587_0001511_1720_3429 560
156 3300046691 Ga0495670_0001742 Ga0495670_0001742_3047_4765 560
157 3300047444 Ga0495675_0004169 Ga0495675_0004169_4533_6242 560
158 3300048088 Ga0495602_0000069 Ga0495602_0000069_54119_55828 560
159 3300048921 Ga0496118_0003667 Ga0496118_0003667_6308_7990 560
160 3300048924 Ga0496121_0000464 Ga0496121_0000464_33472_35154 560
161 3300048925 Ga0496122_0025519 Ga0496122_0025519_1467_3149 560
162 3300048926 Ga0496123_0024551 Ga0496123_0024551_1964_3646 560
163 3300048928 Ga0496125_0004172 Ga0496125_0004172_5058_6740 560
164 3300048929 Ga0496126_0007366 Ga0496126_0007366_3340_5022 560
165 iso_pu_bacteria 2916178963 2916182381 560

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

557

632

0.97

PF00501

AMP-binding

AMP-binding enzyme

90

506

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.9234 19 449
3ni2-assembly1.cif.gz_A crystal structures and enzymatic mechanisms of a populus tomentosa 4-coumarate:coa ligase 0.9146 11 548
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.9143 19 449
5u95-assembly1.cif.gz_A structure of the open conformation of 4-coumarate-coa ligase from nicotiana tabacum 0.9075 9 451
5wm5-assembly1.cif.gz_A crystal structure of cahj in complex with 5-methylsalicyl adenylate 0.9065 19 550
ID Description Score Start End Superfamily
af_A0A1D6KNL0_124_190_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9881 456 516 3.30.300.30
af_Q9UAV8_59_500_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9812 13 447 3.40.50.12780
af_Q499N5_66_508_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9805 15 449 3.40.50.12780
af_Q96CM8_510_614_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9794 451 554 3.30.300.30
af_O18693_47_492_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9781 9 447 3.40.50.12780
ID Description Score Start End GO Terms
AF-A0A182GGA2-F1-model_v4 deleted 0.9712 1 435
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.9712 451 556 GO:0006631
GO:0031956
AF-A0A7X9BE38-F1-model_v4 AMP-binding protein 0.9656 30 414 GO:0006631
GO:0031956
AF-A0A7X9BE38-F1-model_v4 AMP-binding protein 0.9534 30 414 GO:0006631
GO:0031956
AF-A0A2R5L714-F1-model_v4 Medium-chain acyl-CoA ligase ACSF2, mitochondrial (EC 6.2.1.2) 0.9518 126 417 GO:0006631
GO:0031956

Feature Viewer

pLDDT pTM Quality
90.13 0.85 High
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Predicted Structure (AlphaFold2)

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