F243355

General Info

Members Datasets Scaffolds Average Seq Length
164 111 328 398

Family's Representative Sequence

Representative Sequence 3300005457|Ga0070662_100064858|Ga0070662_1000648583
Length 424
Sequence MEAGGAGGRTAQLMGMISVSIDSIAAGGDGVGRSNGLVVFVPRTAPGDVVTAQISGKSHFARGTLRNIVTASPSRIDPPCPHYTRDKCGGCQLQHMTYESQLAGKQVIIRDAVQRIGKRQVELPMVERSPKEWRYRTKLTLTMKRRGARWIAGLHPYDDPVGIFALADCPITDRRVVAAWREIMQADSFFPDAKELRGSVRITSDGPTFVMMGGRSWDARDQFSAAVPSLSAVWWEPAEEQPRRLLFDKRRDRTPSASFAQVNAETAELLRAYVVERVKAHEPASVVDAYAGAGHTAIALSETGIKVTAIELDQDASEWCAGRLRDPSRAIRARVEDALPGVLPADVVLLNPPRAGVDARVTETLEKEAEHLRAIVYVSCNPATLARDLSRMPSYSIASMHGFDMFPQTSHVETVCELRPVKGS

Samples

Sample ID Description Type Environment
1 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049666 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A4_B_2_control Metagenome Rhizosphere
108 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 4.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070662_100064858 3300005457 Bacteria 2676
2 Ga0065707_10166278 3300005295 Bacteria 1520
3 Ga0070683_100000914 3300005329 Bacteria 21921
4 Ga0070683_100050343 3300005329 Bacteria 3856
5 Ga0070683_100056019 3300005329 Bacteria 3660
6 Ga0070670_100039080 3300005331 Bacteria 4080
7 Ga0070680_100028684 3300005336 Bacteria 4466
8 Ga0070680_100038216 3300005336 Bacteria 3882
9 Ga0070680_100068604 3300005336 Bacteria 2911
10 Ga0070682_100013764 3300005337 Bacteria 4664
11 Ga0068868_100019953 3300005338 Bacteria 5028
12 Ga0070669_100003091 3300005353 Bacteria 11983
13 Ga0070669_100044477 3300005353 Bacteria 3236
14 Ga0070669_100104521 3300005353 Bacteria 2141
15 Ga0070675_100010633 3300005354 Bacteria 7193
16 Ga0070675_100018124 3300005354 Bacteria 5604
17 Ga0070675_100084229 3300005354 Bacteria 2655
18 Ga0070671_100160321 3300005355 Bacteria 1901
19 Ga0070673_100056729 3300005364 Bacteria 3091
20 Ga0070673_100204903 3300005364 Bacteria 1700
21 Ga0070659_100052500 3300005366 Bacteria 3207
22 Ga0070659_100214776 3300005366 Bacteria 1586
23 Ga0070709_10007248 3300005434 Bacteria 6078
24 Ga0070709_10056351 3300005434 Bacteria 2485
25 Ga0070694_100031164 3300005444 Bacteria 3494
26 Ga0070708_100000025 3300005445 Bacteria 98091
27 Ga0070663_100033802 3300005455 Bacteria 3535
28 Ga0070681_10004671 3300005458 Bacteria 13095
29 Ga0070681_10026844 3300005458 Bacteria 5789
30 Ga0070681_10227977 3300005458 Bacteria 1777
31 Ga0068867_100085341 3300005459 Bacteria 2387
32 Ga0070706_100110407 3300005467 Bacteria 2559
33 Ga0070707_100014456 3300005468 Bacteria 7398
34 Ga0070707_100134479 3300005468 Bacteria 2405
35 Ga0070698_100012698 3300005471 Bacteria 8916
36 Ga0070698_100195009 3300005471 Bacteria 1962
37 Ga0070684_100000363 3300005535 Bacteria 31171
38 Ga0070684_100083244 3300005535 Bacteria 2834
39 Ga0068853_100036834 3300005539 Bacteria 4161
40 Ga0070672_100008383 3300005543 Bacteria 7065
41 Ga0070672_100145102 3300005543 Unclassified 1961
42 Ga0070695_100009123 3300005545 Bacteria 5896
43 Ga0070665_100033093 3300005548 Bacteria 5202
44 Ga0070704_100060707 3300005549 Bacteria 2702
45 Ga0068855_100213255 3300005563 Bacteria 2169
46 Ga0070664_100008739 3300005564 Bacteria 8202
47 Ga0068857_100003536 3300005577 Bacteria 13061
48 Ga0068857_100212718 3300005577 Bacteria 1764
49 Ga0068854_100037195 3300005578 Bacteria 3415
50 Ga0068856_100275773 3300005614 Unclassified 1698
51 Ga0068864_100104422 3300005618 Bacteria 2517
52 Ga0068861_100034922 3300005719 Bacteria 3721
53 Ga0068862_100000174 3300005844 Bacteria 71565
54 Ga0068862_100096501 3300005844 Bacteria 2581
55 Ga0070716_100002573 3300006173 Bacteria 8396
56 Ga0070712_100199166 3300006175 Bacteria 1572
57 Ga0075430_100025598 3300006846 Bacteria 5022
58 Ga0075430_100069346 3300006846 Bacteria 2958
59 Ga0075433_10253889 3300006852 Unclassified 1560
60 Ga0075434_100018799 3300006871 Bacteria 6679
61 Ga0075429_100010632 3300006880 Bacteria 7962
62 Ga0075436_100001191 3300006914 Bacteria 17666
63 Ga0111539_10014805 3300009094 Bacteria 9728
64 Ga0111539_10066651 3300009094 Bacteria 4252
65 Ga0105245_10022308 3300009098 Bacteria 5557
66 Ga0114129_10015959 3300009147 Bacteria 10680
67 Ga0105241_10000167 3300009174 Bacteria 48170
68 Ga0105248_10129425 3300009177 Bacteria 2848
69 Ga0105237_10008767 3300009545 Bacteria 10912
70 Ga0105249_10000202 3300009553 Bacteria 68134
71 Ga0157373_10101438 3300013100 Bacteria 2025
72 Ga0157374_10052233 3300013296 Bacteria 3805
73 Ga0157378_10036268 3300013297 Bacteria 4364
74 Ga0157378_10207268 3300013297 Bacteria 1857
75 Ga0163162_10070016 3300013306 Bacteria 3560
76 Ga0157372_10047935 3300013307 Bacteria 4748
77 Ga0157372_10114661 3300013307 Bacteria 3089
78 Ga0157375_10010576 3300013308 Bacteria 8125
79 Ga0157375_10021675 3300013308 Bacteria 5898
80 Ga0157375_10028863 3300013308 Bacteria 5208
81 Ga0157380_10164673 3300014326 Bacteria 1931
82 Ga0182008_10057655 3300014497 Unclassified 1918
83 Ga0157377_10065559 3300014745 Bacteria 2087
84 Ga0207642_10089177 3300025899 Bacteria 1519
85 Ga0207699_10024616 3300025906 Bacteria 3294
86 Ga0207699_10102287 3300025906 Bacteria 1820
87 Ga0207645_10080124 3300025907 Bacteria 2093
88 Ga0207643_10027151 3300025908 Bacteria 3173
89 Ga0207684_10108079 3300025910 Bacteria 2380
90 Ga0207707_10017340 3300025912 Bacteria 6278
91 Ga0207707_10056029 3300025912 Bacteria 3428
92 Ga0207707_10321847 3300025912 Bacteria 1335
93 Ga0207660_10051310 3300025917 Bacteria 2932
94 Ga0207649_10064969 3300025920 Bacteria 2309
95 Ga0207646_10031356 3300025922 Bacteria 4812
96 Ga0207646_10035947 3300025922 Bacteria 4472
97 Ga0207681_10000517 3300025923 Bacteria 26784
98 Ga0207681_10005336 3300025923 Bacteria 7897
99 Ga0207659_10020624 3300025926 Bacteria 4359
100 Ga0207659_10046814 3300025926 Bacteria 3056
101 Ga0207659_10222820 3300025926 Bacteria 1517
102 Ga0207644_10024362 3300025931 Bacteria 4154
103 Ga0207644_10105016 3300025931 Bacteria 2128
104 Ga0207690_10020262 3300025932 Bacteria 4106
105 Ga0207706_10043989 3300025933 Bacteria 3958
106 Ga0207706_10076399 3300025933 Bacteria 2945
107 Ga0207706_10112611 3300025933 Bacteria 2394
108 Ga0207706_10125725 3300025933 Bacteria 2255
109 Ga0207704_10067366 3300025938 Bacteria 2252
110 Ga0207665_10003633 3300025939 Bacteria 10303
111 Ga0207691_10002376 3300025940 Bacteria 18427
112 Ga0207661_10029339 3300025944 Bacteria 4224
113 Ga0207661_10123783 3300025944 Unclassified 2206
114 Ga0207679_10030205 3300025945 Bacteria 3782
115 Ga0207679_10157297 3300025945 Bacteria 1857
116 Ga0207667_10133635 3300025949 Bacteria 2555
117 Ga0207667_10153568 3300025949 Bacteria 2369
118 Ga0207651_10010185 3300025960 Bacteria 5197
119 Ga0207651_10024183 3300025960 Bacteria 3753
120 Ga0207712_10000387 3300025961 Bacteria 38262
121 Ga0207640_10005229 3300025981 Bacteria 7063
122 Ga0207640_10024435 3300025981 Bacteria 3646
123 Ga0207677_10021298 3300026023 Bacteria 3958
124 Ga0207648_10013287 3300026089 Bacteria 7669
125 Ga0207648_10052193 3300026089 Bacteria 3575
126 Ga0207676_10117010 3300026095 Bacteria 2241
127 Ga0207674_10004081 3300026116 Bacteria 17697
128 Ga0207674_10004541 3300026116 Bacteria 16669
129 Ga0207675_100214395 3300026118 Bacteria 1853
130 Ga0209966_1004846 3300027695 Bacteria 2294
131 Ga0209998_10001512 3300027717 Bacteria 5588
132 Ga0207428_10054804 3300027907 Bacteria 3174
133 Ga0268265_10000317 3300028380 Bacteria 53095
134 Ga0268265_10045545 3300028380 Bacteria 3274
135 Ga0307408_100057774 3300031548 Bacteria 2818
136 Ga0307408_100101864 3300031548 Bacteria 2189
137 Ga0307405_10011534 3300031731 Bacteria 4640
138 Ga0307405_10017985 3300031731 Bacteria 3891
139 Ga0307410_10040555 3300031852 Bacteria 3065
140 Ga0307412_10004215 3300031911 Bacteria 8018
141 Ga0307412_10225748 3300031911 Bacteria 1439
142 Ga0307409_100252752 3300031995 Bacteria 1612
143 Ga0307416_100000944 3300032002 Bacteria 15391
144 Ga0307416_100026165 3300032002 Bacteria 4293
145 Ga0307414_10118413 3300032004 Bacteria 2031
146 Ga0307411_10078351 3300032005 Bacteria 2265
147 Ga0307411_10114585 3300032005 Bacteria 1937
148 Ga0307415_100139778 3300032126 Bacteria 1848
149 Ga0373941_0012629 3300035115 Bacteria 2213
150 Ga0451577_0017501 3300042876 Bacteria 6620
151 Ga0451577_0032642 3300042876 Bacteria 4690
152 Ga0466966_0030800 3300044684 Bacteria 3480
153 Ga0453684_0000368 3300044712 Bacteria 185018
154 Ga0453684_0008500 3300044712 Bacteria 18357
155 Ga0453684_0153520 3300044712 Bacteria 2733
156 Ga0466959_0061499 3300045049 Bacteria 2730
157 Ga0495590_0038490 3300046457 Bacteria 1668
158 Ga0501047_0012509 3300049581 Bacteria 8037
159 Ga0501228_002774 3300049666 Unclassified 1399
160 Ga0501270_003015 3300049767 Unclassified 1783
161 Ga0501035_0032236 3300049822 Bacteria 4769
162 nmdc:mga08y16_116897_c1 3300050511 Bacteria 2776
163 nmdc:mga08y16_551658_c1 3300050511 Unclassified 1166
164 nmdc:mga08x19_10660_c1 3300050514 Bacteria 5526
165 Ga0070662_100064858
166 Ga0065707_10166278
167 Ga0070683_100000914
168 Ga0070683_100050343
169 Ga0070683_100056019
170 Ga0070670_100039080
171 Ga0070680_100028684
172 Ga0070680_100038216
173 Ga0070680_100068604
174 Ga0070682_100013764
175 Ga0068868_100019953
176 Ga0070669_100003091
177 Ga0070669_100044477
178 Ga0070669_100104521
179 Ga0070675_100010633
180 Ga0070675_100018124
181 Ga0070675_100084229
182 Ga0070671_100160321
183 Ga0070673_100056729
184 Ga0070673_100204903
185 Ga0070659_100052500
186 Ga0070659_100214776
187 Ga0070709_10007248
188 Ga0070709_10056351
189 Ga0070694_100031164
190 Ga0070708_100000025
191 Ga0070663_100033802
192 Ga0070681_10004671
193 Ga0070681_10026844
194 Ga0070681_10227977
195 Ga0068867_100085341
196 Ga0070706_100110407
197 Ga0070707_100014456
198 Ga0070707_100134479
199 Ga0070698_100012698
200 Ga0070698_100195009
201 Ga0070684_100000363
202 Ga0070684_100083244
203 Ga0068853_100036834
204 Ga0070672_100008383
205 Ga0070672_100145102
206 Ga0070695_100009123
207 Ga0070665_100033093
208 Ga0070704_100060707
209 Ga0068855_100213255
210 Ga0070664_100008739
211 Ga0068857_100003536
212 Ga0068857_100212718
213 Ga0068854_100037195
214 Ga0068856_100275773
215 Ga0068864_100104422
216 Ga0068861_100034922
217 Ga0068862_100000174
218 Ga0068862_100096501
219 Ga0070716_100002573
220 Ga0070712_100199166
221 Ga0075430_100025598
222 Ga0075430_100069346
223 Ga0075433_10253889
224 Ga0075434_100018799
225 Ga0075429_100010632
226 Ga0075436_100001191
227 Ga0111539_10014805
228 Ga0111539_10066651
229 Ga0105245_10022308
230 Ga0114129_10015959
231 Ga0105241_10000167
232 Ga0105248_10129425
233 Ga0105237_10008767
234 Ga0105249_10000202
235 Ga0157373_10101438
236 Ga0157374_10052233
237 Ga0157378_10036268
238 Ga0157378_10207268
239 Ga0163162_10070016
240 Ga0157372_10047935
241 Ga0157372_10114661
242 Ga0157375_10010576
243 Ga0157375_10021675
244 Ga0157375_10028863
245 Ga0157380_10164673
246 Ga0182008_10057655
247 Ga0157377_10065559
248 Ga0207642_10089177
249 Ga0207699_10024616
250 Ga0207699_10102287
251 Ga0207645_10080124
252 Ga0207643_10027151
253 Ga0207684_10108079
254 Ga0207707_10017340
255 Ga0207707_10056029
256 Ga0207707_10321847
257 Ga0207660_10051310
258 Ga0207649_10064969
259 Ga0207646_10031356
260 Ga0207646_10035947
261 Ga0207681_10000517
262 Ga0207681_10005336
263 Ga0207659_10020624
264 Ga0207659_10046814
265 Ga0207659_10222820
266 Ga0207644_10024362
267 Ga0207644_10105016
268 Ga0207690_10020262
269 Ga0207706_10043989
270 Ga0207706_10076399
271 Ga0207706_10112611
272 Ga0207706_10125725
273 Ga0207704_10067366
274 Ga0207665_10003633
275 Ga0207691_10002376
276 Ga0207661_10029339
277 Ga0207661_10123783
278 Ga0207679_10030205
279 Ga0207679_10157297
280 Ga0207667_10133635
281 Ga0207667_10153568
282 Ga0207651_10010185
283 Ga0207651_10024183
284 Ga0207712_10000387
285 Ga0207640_10005229
286 Ga0207640_10024435
287 Ga0207677_10021298
288 Ga0207648_10013287
289 Ga0207648_10052193
290 Ga0207676_10117010
291 Ga0207674_10004081
292 Ga0207674_10004541
293 Ga0207675_100214395
294 Ga0209966_1004846
295 Ga0209998_10001512
296 Ga0207428_10054804
297 Ga0268265_10000317
298 Ga0268265_10045545
299 Ga0307408_100057774
300 Ga0307408_100101864
301 Ga0307405_10011534
302 Ga0307405_10017985
303 Ga0307410_10040555
304 Ga0307412_10004215
305 Ga0307412_10225748
306 Ga0307409_100252752
307 Ga0307416_100000944
308 Ga0307416_100026165
309 Ga0307414_10118413
310 Ga0307411_10078351
311 Ga0307411_10114585
312 Ga0307415_100139778
313 Ga0373941_0012629
314 Ga0451577_0017501
315 Ga0451577_0032642
316 Ga0466966_0030800
317 Ga0453684_0000368
318 Ga0453684_0008500
319 Ga0453684_0153520
320 Ga0466959_0061499
321 Ga0495590_0038490
322 Ga0501047_0012509
323 Ga0501228_002774
324 Ga0501270_003015
325 Ga0501035_0032236
326 nmdc:mga08y16_116897_c1
327 nmdc:mga08y16_551658_c1
328 nmdc:mga08x19_10660_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05958

tRNA_U5-meth_tr

tRNA (Uracil-5-)-methyltransferase

333

420

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yvc-assembly1.cif.gz_A solution structure of the conserved protein from the gene locus mmp0076 of methanococcus maripaludis. northeast structural genomics target mrr5. 0.8998 2 51
5zq8-assembly1.cif.gz_B crystal structure of sprlmcd with u747 stemloop rna 0.8557 2 403
5dnk-assembly1.cif.gz_B the structure of pkmt1 from rickettsia prowazekii in complex with adohcy 0.8496 268 361
5zq8-assembly1.cif.gz_B crystal structure of sprlmcd with u747 stemloop rna 0.846 2 403
4pyj-assembly1.cif.gz_A human apo-comt, single domain swap 0.8264 257 336
ID Description Score Start End Superfamily
af_Q58074_11_77_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9517 2 51 2.40.50.140
af_Q2FWZ3_2_80_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9361 2 70 2.40.50.140
af_P75817_215_375_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9313 249 404 3.40.50.150
2bh2B01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9297 1 70 2.40.50.140
af_O07191_4_80_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9175 2 66 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A2V7JQL3-F1-model_v4 TRAM domain-containing protein 0.9792 3 349 GO:0070041
GO:0070475
AF-A0A7Y5K298-F1-model_v4 Class I SAM-dependent RNA methyltransferase 0.9694 54 406 GO:0070041
GO:0070475
AF-A0A7V9ZGD9-F1-model_v4 Class I SAM-dependent RNA methyltransferase 0.9574 1 238 GO:0070041
GO:0070475
AF-A0A7Y5K298-F1-model_v4 Class I SAM-dependent RNA methyltransferase 0.9561 54 406 GO:0070041
GO:0070475
AF-A0A2V7IWD0-F1-model_v4 TRAM domain-containing protein 0.9446 2 176 GO:0070041
GO:0070475

Map