F242693
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 163 | 131 | 163 | 114 |
Family's Representative Sequence
| Representative Sequence | 3300059426|Ga0590077_001139|Ga0590077_001139_1302_1715 |
| Length | 137 |
| Sequence | MRKPELRSFPGAGKLEADMPKYMLLLHDNPSVFTSMSPEEMQKALEKYMAWGNKLRTSGILLASDKLTDEPGRVMRGKNGQVRVTDGPYSETKEVLGGYYAIEAASYDEAMDRARDCPHLAYGGTIEVRQIDDMLGQ |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 | Metagenome | Rhizosphere |
| 2 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 18 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 26 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 27 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 28 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 29 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 30 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 31 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 32 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 33 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 34 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 35 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 36 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 37 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 38 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 59 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 82 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 85 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 86 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 87 | 3300035115 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 | Metagenome | Rhizosphere |
| 88 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 89 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 90 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 91 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 92 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 93 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 94 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 95 | 3300042133 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 | Metagenome | Rhizosphere |
| 96 | 3300042436 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 | Metagenome | Rhizosphere |
| 97 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 98 | 3300042461 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 | Metagenome | Rhizosphere |
| 99 | 3300042530 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 | Metagenome | Rhizosphere |
| 100 | 3300042993 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 | Metagenome | Rhizosphere |
| 101 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 102 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 111 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 112 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 120 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 121 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 122 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 127 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300059421 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 129 | 3300059423 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 130 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 131 | 3300059426 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.29 |
| Nodule | 0 |
| Rhizoplane | 1.23 |
| Rhizosphere | 92.64 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.84 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | MBSR1b_contig_10932331 | 2162886012 | Bacteria | 1091 |
| 2 | Ga0065715_10316580 | 3300005293 | Bacteria | 1010 |
| 3 | Ga0070666_10954256 | 3300005335 | Bacteria | 635 |
| 4 | Ga0070661_101393861 | 3300005344 | Bacteria | 589 |
| 5 | Ga0070668_101287461 | 3300005347 | Bacteria | 664 |
| 6 | Ga0070671_100851379 | 3300005355 | Bacteria | 795 |
| 7 | Ga0070671_101834403 | 3300005355 | Unclassified | 539 |
| 8 | Ga0070659_100338914 | 3300005366 | Bacteria | 1259 |
| 9 | Ga0070667_100413139 | 3300005367 | Bacteria | 1229 |
| 10 | Ga0070709_10126666 | 3300005434 | Bacteria | 1738 |
| 11 | Ga0070709_10187096 | 3300005434 | Unclassified | 1458 |
| 12 | Ga0070709_10608259 | 3300005434 | Bacteria | 842 |
| 13 | Ga0070713_101008001 | 3300005436 | Bacteria | 803 |
| 14 | Ga0070713_102313176 | 3300005436 | Unclassified | 520 |
| 15 | Ga0070711_100588378 | 3300005439 | Bacteria | 927 |
| 16 | Ga0070708_100774241 | 3300005445 | Unclassified | 902 |
| 17 | Ga0070678_101613613 | 3300005456 | Unclassified | 609 |
| 18 | Ga0070681_10090529 | 3300005458 | Unclassified | 3010 |
| 19 | Ga0070706_100178566 | 3300005467 | Bacteria | 1982 |
| 20 | Ga0070707_100894897 | 3300005468 | Unclassified | 852 |
| 21 | Ga0068853_100148810 | 3300005539 | Bacteria | 2106 |
| 22 | Ga0070695_101005897 | 3300005545 | Unclassified | 678 |
| 23 | Ga0070665_100442459 | 3300005548 | Bacteria | 1309 |
| 24 | Ga0068855_100057683 | 3300005563 | Bacteria | 4551 |
| 25 | Ga0070664_100712660 | 3300005564 | Bacteria | 935 |
| 26 | Ga0068856_100781676 | 3300005614 | Bacteria | 974 |
| 27 | Ga0068852_102829605 | 3300005616 | Bacteria | 503 |
| 28 | Ga0068859_100978831 | 3300005617 | Bacteria | 929 |
| 29 | Ga0068861_100471867 | 3300005719 | Bacteria | 1129 |
| 30 | Ga0068858_101257890 | 3300005842 | Bacteria | 728 |
| 31 | Ga0068860_100418010 | 3300005843 | Bacteria | 1329 |
| 32 | Ga0068860_102319957 | 3300005843 | Unclassified | 557 |
| 33 | Ga0081455_10010867 | 3300005937 | Bacteria | 9188 |
| 34 | Ga0075368_10009645 | 3300006042 | Bacteria | 3476 |
| 35 | Ga0075363_100598079 | 3300006048 | Bacteria | 661 |
| 36 | Ga0070716_100338370 | 3300006173 | Bacteria | 1061 |
| 37 | Ga0070712_101326446 | 3300006175 | Bacteria | 627 |
| 38 | Ga0075367_10004920 | 3300006178 | Bacteria | 6582 |
| 39 | Ga0075428_102753539 | 3300006844 | Unclassified | 500 |
| 40 | Ga0075430_100347874 | 3300006846 | Bacteria | 1224 |
| 41 | Ga0075430_101117621 | 3300006846 | Bacteria | 649 |
| 42 | Ga0075431_100004019 | 3300006847 | Bacteria | 14332 |
| 43 | Ga0075431_100148097 | 3300006847 | Unclassified | 2418 |
| 44 | Ga0075431_100784027 | 3300006847 | Bacteria | 927 |
| 45 | Ga0075436_100005938 | 3300006914 | Bacteria | 8388 |
| 46 | Ga0075436_100301426 | 3300006914 | Bacteria | 1149 |
| 47 | Ga0097620_100978814 | 3300006931 | Bacteria | 929 |
| 48 | Ga0105240_10020287 | 3300009093 | Bacteria | 8871 |
| 49 | Ga0111539_10225339 | 3300009094 | Bacteria | 2183 |
| 50 | Ga0111539_10777909 | 3300009094 | Bacteria | 1114 |
| 51 | Ga0105247_10166573 | 3300009101 | Bacteria | 1463 |
| 52 | Ga0105241_10793970 | 3300009174 | Bacteria | 871 |
| 53 | Ga0105248_10000003 | 3300009177 | Bacteria | 1019601 |
| 54 | Ga0105248_10021094 | 3300009177 | Bacteria | 7219 |
| 55 | Ga0105248_10077533 | 3300009177 | Bacteria | 3736 |
| 56 | Ga0105237_11524526 | 3300009545 | Archaea | 675 |
| 57 | Ga0105238_12216011 | 3300009551 | Bacteria | 584 |
| 58 | Ga0105249_11974121 | 3300009553 | Unclassified | 656 |
| 59 | Ga0157371_10815463 | 3300013102 | Bacteria | 704 |
| 60 | Ga0157370_10584766 | 3300013104 | Bacteria | 1023 |
| 61 | Ga0157369_10016752 | 3300013105 | Bacteria | 8237 |
| 62 | Ga0157374_10037649 | 3300013296 | Bacteria | 4442 |
| 63 | Ga0157378_11094341 | 3300013297 | Bacteria | 834 |
| 64 | Ga0157372_10681906 | 3300013307 | Bacteria | 1196 |
| 65 | Ga0157375_10700842 | 3300013308 | Bacteria | 1166 |
| 66 | Ga0163163_10160998 | 3300014325 | Bacteria | 2290 |
| 67 | Ga0163163_10225353 | 3300014325 | Bacteria | 1923 |
| 68 | Ga0157380_10117480 | 3300014326 | Bacteria | 2246 |
| 69 | Ga0157379_10032057 | 3300014968 | Bacteria | 4683 |
| 70 | Ga0157379_10494515 | 3300014968 | Bacteria | 1133 |
| 71 | Ga0157379_10510657 | 3300014968 | Bacteria | 1115 |
| 72 | Ga0157376_10050688 | 3300014969 | Unclassified | 3445 |
| 73 | Ga0157376_11644255 | 3300014969 | Bacteria | 677 |
| 74 | Ga0213875_10232860 | 3300021388 | Unclassified | 868 |
| 75 | Ga0207710_10134991 | 3300025900 | Bacteria | 1187 |
| 76 | Ga0207680_10433369 | 3300025903 | Bacteria | 932 |
| 77 | Ga0207707_10179247 | 3300025912 | Unclassified | 1850 |
| 78 | Ga0207695_10110332 | 3300025913 | Bacteria | 2731 |
| 79 | Ga0207671_10889370 | 3300025914 | Archaea | 704 |
| 80 | Ga0207663_10400950 | 3300025916 | Bacteria | 1049 |
| 81 | Ga0207662_11370129 | 3300025918 | Unclassified | 502 |
| 82 | Ga0207649_10096377 | 3300025920 | Bacteria | 1949 |
| 83 | Ga0207700_11632211 | 3300025928 | Bacteria | 570 |
| 84 | Ga0207669_11264144 | 3300025937 | Bacteria | 626 |
| 85 | Ga0207665_10640161 | 3300025939 | Bacteria | 833 |
| 86 | Ga0207711_10000013 | 3300025941 | Bacteria | 514850 |
| 87 | Ga0207711_10027903 | 3300025941 | Bacteria | 4746 |
| 88 | Ga0207679_10634688 | 3300025945 | Bacteria | 965 |
| 89 | Ga0207667_10085537 | 3300025949 | Bacteria | 3264 |
| 90 | Ga0207712_11270790 | 3300025961 | Unclassified | 657 |
| 91 | Ga0207668_10743210 | 3300025972 | Unclassified | 865 |
| 92 | Ga0207658_10703458 | 3300025986 | Bacteria | 913 |
| 93 | Ga0207703_10368575 | 3300026035 | Bacteria | 1326 |
| 94 | Ga0207703_10529565 | 3300026035 | Unclassified | 1109 |
| 95 | Ga0207639_10000013 | 3300026041 | Bacteria | 293084 |
| 96 | Ga0207639_10005281 | 3300026041 | Bacteria | 8719 |
| 97 | Ga0207675_100077564 | 3300026118 | Bacteria | 3113 |
| 98 | Ga0207698_12254753 | 3300026142 | Bacteria | 557 |
| 99 | Ga0209974_10040047 | 3300027876 | Unclassified | 1559 |
| 100 | Ga0207428_10202988 | 3300027907 | Bacteria | 1491 |
| 101 | Ga0268266_10322649 | 3300028379 | Bacteria | 1446 |
| 102 | Ga0268266_12190604 | 3300028379 | Bacteria | 525 |
| 103 | Ga0268264_10358129 | 3300028381 | Bacteria | 1391 |
| 104 | Ga0268264_12073006 | 3300028381 | Bacteria | 577 |
| 105 | Ga0307405_11547088 | 3300031731 | Unclassified | 584 |
| 106 | Ga0307413_10830695 | 3300031824 | Bacteria | 779 |
| 107 | Ga0307409_101901445 | 3300031995 | Bacteria | 625 |
| 108 | Ga0373941_0172901 | 3300035115 | Bacteria | 806 |
| 109 | Ga0373945_0297898 | 3300035116 | Bacteria | 690 |
| 110 | Ga0373956_0315321 | 3300035119 | Bacteria | 745 |
| 111 | Ga0373935_0409622 | 3300035692 | Unclassified | 975 |
| 112 | Ga0373927_0184251 | 3300035695 | Bacteria | 1370 |
| 113 | Ga0373927_0410381 | 3300035695 | Bacteria | 894 |
| 114 | Ga0373937_1493023 | 3300036401 | Bacteria | 623 |
| 115 | Ga0373937_1870539 | 3300036401 | Bacteria | 546 |
| 116 | Ga0373925_0167420 | 3300037068 | Bacteria | 1734 |
| 117 | Ga0436364_0818921 | 3300037853 | Unclassified | 1110 |
| 118 | Ga0436364_1081482 | 3300037853 | Unclassified | 604 |
| 119 | Ga0450896_032211 | 3300042133 | Bacteria | 797 |
| 120 | Ga0439435_0045656 | 3300042436 | Bacteria | 1239 |
| 121 | Ga0439464_0054909 | 3300042439 | Bacteria | 1158 |
| 122 | Ga0439464_0067386 | 3300042439 | Bacteria | 1055 |
| 123 | Ga0439460_0179604 | 3300042461 | Bacteria | 715 |
| 124 | Ga0450916_022902 | 3300042530 | Bacteria | 869 |
| 125 | Ga0439440_0233706 | 3300042993 | Bacteria | 555 |
| 126 | Ga0451576_0734722 | 3300045051 | Bacteria | 1037 |
| 127 | Ga0495580_0015629 | 3300046472 | Bacteria | 5719 |
| 128 | Ga0495580_0473217 | 3300046472 | Unclassified | 839 |
| 129 | Ga0495666_0460771 | 3300046526 | Bacteria | 569 |
| 130 | Ga0495665_0499446 | 3300046531 | Bacteria | 613 |
| 131 | Ga0495656_0745590 | 3300046615 | Unclassified | 528 |
| 132 | Ga0495634_0068785 | 3300046642 | Bacteria | 2338 |
| 133 | Ga0495658_0835508 | 3300046683 | Unclassified | 589 |
| 134 | Ga0495674_0622991 | 3300047319 | Bacteria | 853 |
| 135 | Ga0495684_0218442 | 3300047471 | Bacteria | 1399 |
| 136 | Ga0496114_1329550 | 3300048917 | Unclassified | 606 |
| 137 | Ga0496115_0178305 | 3300048918 | Bacteria | 1757 |
| 138 | Ga0501036_0418095 | 3300049572 | Unclassified | 1118 |
| 139 | Ga0501036_0838152 | 3300049572 | Bacteria | 756 |
| 140 | Ga0501039_0655252 | 3300049575 | Bacteria | 822 |
| 141 | Ga0501041_0575040 | 3300049577 | Unclassified | 719 |
| 142 | Ga0501075_0195247 | 3300049591 | Bacteria | 1544 |
| 143 | Ga0501076_0471804 | 3300049592 | Bacteria | 1034 |
| 144 | Ga0501076_1100209 | 3300049592 | Bacteria | 654 |
| 145 | Ga0501076_1234761 | 3300049592 | Bacteria | 615 |
| 146 | Ga0501079_1378931 | 3300049741 | Unclassified | 555 |
| 147 | Ga0501081_0951266 | 3300049743 | Unclassified | 648 |
| 148 | Ga0501081_0964173 | 3300049743 | Bacteria | 644 |
| 149 | nmdc:mga03n38_300993_c1 | 3300050490 | Bacteria | 861 |
| 150 | nmdc:mga0k408_54190_c1 | 3300050493 | Unclassified | 2324 |
| 151 | nmdc:mga06z11_44692_c1 | 3300050494 | Unclassified | 2235 |
| 152 | nmdc:mga0qj67_350254_c1 | 3300050509 | Bacteria | 1194 |
| 153 | nmdc:mga06r32_313172_c1 | 3300050510 | Unclassified | 1555 |
| 154 | nmdc:mga06r32_698590_c1 | 3300050510 | Unclassified | 980 |
| 155 | nmdc:mga08y16_365066_c1 | 3300050511 | Bacteria | 1482 |
| 156 | nmdc:mga08x19_20046_c1 | 3300050514 | Bacteria | 4115 |
| 157 | Ga0500595_112210 | 3300053119 | Bacteria | 774 |
| 158 | Ga0501084_0179243 | 3300054114 | Bacteria | 1789 |
| 159 | Ga0590071_000045 | 3300059421 | Bacteria | 31970 |
| 160 | Ga0590071_004156 | 3300059421 | Bacteria | 3531 |
| 161 | Ga0590074_001780 | 3300059423 | Unclassified | 3519 |
| 162 | Ga0590075_001744 | 3300059424 | Bacteria | 5332 |
| 163 | Ga0590077_001139 | 3300059426 | Bacteria | 6493 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300009101 | Ga0105247_10166573 | Ga0105247_101665732 | 102 |
| 2 | 3300009177 | Ga0105248_10000003 | Ga0105248_10000003436 | 102 |
| 3 | 3300014325 | Ga0163163_10225353 | Ga0163163_102253532 | 102 |
| 4 | 3300014968 | Ga0157379_10032057 | Ga0157379_100320572 | 102 |
| 5 | 3300025900 | Ga0207710_10134991 | Ga0207710_101349912 | 102 |
| 6 | 3300025941 | Ga0207711_10000013 | Ga0207711_1000001312 | 102 |
| 7 | 3300053119 | Ga0500595_112210 | Ga0500595_112210_72_416 | 102 |
| 8 | 3300005344 | Ga0070661_101393861 | Ga0070661_1013938612 | 103 |
| 9 | 3300005355 | Ga0070671_100851379 | Ga0070671_1008513792 | 103 |
| 10 | 3300005366 | Ga0070659_100338914 | Ga0070659_1003389142 | 103 |
| 11 | 3300005434 | Ga0070709_10126666 | Ga0070709_101266662 | 103 |
| 12 | 3300005436 | Ga0070713_101008001 | Ga0070713_1010080012 | 103 |
| 13 | 3300005439 | Ga0070711_100588378 | Ga0070711_1005883781 | 103 |
| 14 | 3300005539 | Ga0068853_100148810 | Ga0068853_1001488102 | 103 |
| 15 | 3300005545 | Ga0070695_101005897 | Ga0070695_1010058971 | 103 |
| 16 | 3300005548 | Ga0070665_100442459 | Ga0070665_1004424592 | 103 |
| 17 | 3300005563 | Ga0068855_100057683 | Ga0068855_1000576833 | 103 |
| 18 | 3300005564 | Ga0070664_100712660 | Ga0070664_1007126602 | 103 |
| 19 | 3300005614 | Ga0068856_100781676 | Ga0068856_1007816762 | 103 |
| 20 | 3300005616 | Ga0068852_102829605 | Ga0068852_1028296051 | 103 |
| 21 | 3300006173 | Ga0070716_100338370 | Ga0070716_1003383702 | 103 |
| 22 | 3300006175 | Ga0070712_101326446 | Ga0070712_1013264462 | 103 |
| 23 | 3300009093 | Ga0105240_10020287 | Ga0105240_100202873 | 103 |
| 24 | 3300009174 | Ga0105241_10793970 | Ga0105241_107939702 | 103 |
| 25 | 3300013102 | Ga0157371_10815463 | Ga0157371_108154632 | 103 |
| 26 | 3300013104 | Ga0157370_10584766 | Ga0157370_105847663 | 103 |
| 27 | 3300013105 | Ga0157369_10016752 | Ga0157369_100167528 | 103 |
| 28 | 3300013296 | Ga0157374_10037649 | Ga0157374_100376494 | 103 |
| 29 | 3300013307 | Ga0157372_10681906 | Ga0157372_106819062 | 103 |
| 30 | 3300014969 | Ga0157376_10050688 | Ga0157376_100506882 | 103 |
| 31 | 3300025913 | Ga0207695_10110332 | Ga0207695_101103323 | 103 |
| 32 | 3300025916 | Ga0207663_10400950 | Ga0207663_104009502 | 103 |
| 33 | 3300025918 | Ga0207662_11370129 | Ga0207662_113701292 | 103 |
| 34 | 3300025920 | Ga0207649_10096377 | Ga0207649_100963773 | 103 |
| 35 | 3300025939 | Ga0207665_10640161 | Ga0207665_106401612 | 103 |
| 36 | 3300025945 | Ga0207679_10634688 | Ga0207679_106346881 | 103 |
| 37 | 3300025949 | Ga0207667_10085537 | Ga0207667_100855372 | 103 |
| 38 | 3300026041 | Ga0207639_10000013 | Ga0207639_10000013185 | 103 |
| 39 | 3300026041 | Ga0207639_10005281 | Ga0207639_100052812 | 103 |
| 40 | 3300026142 | Ga0207698_12254753 | Ga0207698_122547532 | 103 |
| 41 | 3300028379 | Ga0268266_10322649 | Ga0268266_103226492 | 103 |
| 42 | 3300035115 | Ga0373941_0172901 | Ga0373941_0172901_136_492 | 103 |
| 43 | 3300035119 | Ga0373956_0315321 | Ga0373956_0315321_388_723 | 103 |
| 44 | 3300037068 | Ga0373925_0167420 | Ga0373925_0167420_149_484 | 103 |
| 45 | 3300046472 | Ga0495580_0473217 | Ga0495580_0473217_68_403 | 103 |
| 46 | 3300046526 | Ga0495666_0460771 | Ga0495666_0460771_119_454 | 103 |
| 47 | 3300047319 | Ga0495674_0622991 | Ga0495674_0622991_29_364 | 103 |
| 48 | 3300048917 | Ga0496114_1329550 | Ga0496114_1329550_38_373 | 103 |
| 49 | 3300048918 | Ga0496115_0178305 | Ga0496115_0178305_1311_1646 | 103 |
| 50 | 3300049743 | Ga0501081_0951266 | Ga0501081_0951266_222_545 | 103 |
| 51 | 3300049743 | Ga0501081_0964173 | Ga0501081_0964173_133_456 | 103 |
| 52 | 2162886012 | MBSR1b_contig_10932331 | MBSR1b_0132.00005790 | 104 |
| 53 | 3300005293 | Ga0065715_10316580 | Ga0065715_103165802 | 104 |
| 54 | 3300005335 | Ga0070666_10954256 | Ga0070666_109542561 | 104 |
| 55 | 3300005347 | Ga0070668_101287461 | Ga0070668_1012874611 | 104 |
| 56 | 3300005355 | Ga0070671_101834403 | Ga0070671_1018344031 | 104 |
| 57 | 3300005367 | Ga0070667_100413139 | Ga0070667_1004131392 | 104 |
| 58 | 3300005434 | Ga0070709_10187096 | Ga0070709_101870962 | 104 |
| 59 | 3300005434 | Ga0070709_10608259 | Ga0070709_106082592 | 104 |
| 60 | 3300005436 | Ga0070713_102313176 | Ga0070713_1023131761 | 104 |
| 61 | 3300005445 | Ga0070708_100774241 | Ga0070708_1007742412 | 104 |
| 62 | 3300005456 | Ga0070678_101613613 | Ga0070678_1016136132 | 104 |
| 63 | 3300005458 | Ga0070681_10090529 | Ga0070681_100905294 | 104 |
| 64 | 3300005467 | Ga0070706_100178566 | Ga0070706_1001785662 | 104 |
| 65 | 3300005468 | Ga0070707_100894897 | Ga0070707_1008948972 | 104 |
| 66 | 3300005617 | Ga0068859_100978831 | Ga0068859_1009788312 | 104 |
| 67 | 3300005719 | Ga0068861_100471867 | Ga0068861_1004718672 | 104 |
| 68 | 3300005842 | Ga0068858_101257890 | Ga0068858_1012578902 | 104 |
| 69 | 3300005843 | Ga0068860_100418010 | Ga0068860_1004180101 | 104 |
| 70 | 3300005843 | Ga0068860_102319957 | Ga0068860_1023199572 | 104 |
| 71 | 3300005937 | Ga0081455_10010867 | Ga0081455_100108671 | 104 |
| 72 | 3300006042 | Ga0075368_10009645 | Ga0075368_100096452 | 104 |
| 73 | 3300006048 | Ga0075363_100598079 | Ga0075363_1005980792 | 104 |
| 74 | 3300006178 | Ga0075367_10004920 | Ga0075367_100049203 | 104 |
| 75 | 3300006844 | Ga0075428_102753539 | Ga0075428_1027535392 | 104 |
| 76 | 3300006846 | Ga0075430_100347874 | Ga0075430_1003478742 | 104 |
| 77 | 3300006846 | Ga0075430_101117621 | Ga0075430_1011176211 | 104 |
| 78 | 3300006847 | Ga0075431_100004019 | Ga0075431_1000040194 | 104 |
| 79 | 3300006847 | Ga0075431_100148097 | Ga0075431_1001480972 | 104 |
| 80 | 3300006847 | Ga0075431_100784027 | Ga0075431_1007840272 | 104 |
| 81 | 3300006914 | Ga0075436_100005938 | Ga0075436_1000059383 | 104 |
| 82 | 3300006914 | Ga0075436_100301426 | Ga0075436_1003014262 | 104 |
| 83 | 3300006931 | Ga0097620_100978814 | Ga0097620_1009788142 | 104 |
| 84 | 3300009094 | Ga0111539_10225339 | Ga0111539_102253392 | 104 |
| 85 | 3300009094 | Ga0111539_10777909 | Ga0111539_107779091 | 104 |
| 86 | 3300009177 | Ga0105248_10021094 | Ga0105248_100210942 | 104 |
| 87 | 3300009177 | Ga0105248_10077533 | Ga0105248_100775334 | 104 |
| 88 | 3300009545 | Ga0105237_11524526 | Ga0105237_115245262 | 104 |
| 89 | 3300009551 | Ga0105238_12216011 | Ga0105238_122160112 | 104 |
| 90 | 3300009553 | Ga0105249_11974121 | Ga0105249_119741212 | 104 |
| 91 | 3300013297 | Ga0157378_11094341 | Ga0157378_110943411 | 104 |
| 92 | 3300013308 | Ga0157375_10700842 | Ga0157375_107008421 | 104 |
| 93 | 3300014325 | Ga0163163_10160998 | Ga0163163_101609982 | 104 |
| 94 | 3300014326 | Ga0157380_10117480 | Ga0157380_101174802 | 104 |
| 95 | 3300014968 | Ga0157379_10494515 | Ga0157379_104945152 | 104 |
| 96 | 3300014968 | Ga0157379_10510657 | Ga0157379_105106572 | 104 |
| 97 | 3300014969 | Ga0157376_11644255 | Ga0157376_116442552 | 104 |
| 98 | 3300021388 | Ga0213875_10232860 | Ga0213875_102328601 | 104 |
| 99 | 3300025903 | Ga0207680_10433369 | Ga0207680_104333691 | 104 |
| 100 | 3300025912 | Ga0207707_10179247 | Ga0207707_101792472 | 104 |
| 101 | 3300025914 | Ga0207671_10889370 | Ga0207671_108893702 | 104 |
| 102 | 3300025928 | Ga0207700_11632211 | Ga0207700_116322111 | 104 |
| 103 | 3300025937 | Ga0207669_11264144 | Ga0207669_112641442 | 104 |
| 104 | 3300025941 | Ga0207711_10027903 | Ga0207711_100279032 | 104 |
| 105 | 3300025961 | Ga0207712_11270790 | Ga0207712_112707902 | 104 |
| 106 | 3300025972 | Ga0207668_10743210 | Ga0207668_107432102 | 104 |
| 107 | 3300025986 | Ga0207658_10703458 | Ga0207658_107034581 | 104 |
| 108 | 3300026035 | Ga0207703_10368575 | Ga0207703_103685752 | 104 |
| 109 | 3300026035 | Ga0207703_10529565 | Ga0207703_105295651 | 104 |
| 110 | 3300026118 | Ga0207675_100077564 | Ga0207675_1000775641 | 104 |
| 111 | 3300027876 | Ga0209974_10040047 | Ga0209974_100400471 | 104 |
| 112 | 3300027907 | Ga0207428_10202988 | Ga0207428_102029882 | 104 |
| 113 | 3300028379 | Ga0268266_12190604 | Ga0268266_121906042 | 104 |
| 114 | 3300028381 | Ga0268264_10358129 | Ga0268264_103581292 | 104 |
| 115 | 3300028381 | Ga0268264_12073006 | Ga0268264_120730061 | 104 |
| 116 | 3300031731 | Ga0307405_11547088 | Ga0307405_115470881 | 104 |
| 117 | 3300031824 | Ga0307413_10830695 | Ga0307413_108306951 | 104 |
| 118 | 3300031995 | Ga0307409_101901445 | Ga0307409_1019014452 | 104 |
| 119 | 3300035116 | Ga0373945_0297898 | Ga0373945_0297898_219_557 | 104 |
| 120 | 3300035692 | Ga0373935_0409622 | Ga0373935_0409622_219_557 | 104 |
| 121 | 3300035695 | Ga0373927_0184251 | Ga0373927_0184251_871_1209 | 104 |
| 122 | 3300035695 | Ga0373927_0410381 | Ga0373927_0410381_21_359 | 104 |
| 123 | 3300036401 | Ga0373937_1493023 | Ga0373937_1493023_16_354 | 104 |
| 124 | 3300036401 | Ga0373937_1870539 | Ga0373937_1870539_67_405 | 104 |
| 125 | 3300037853 | Ga0436364_0818921 | Ga0436364_0818921_717_1088 | 104 |
| 126 | 3300037853 | Ga0436364_1081482 | Ga0436364_1081482_251_589 | 104 |
| 127 | 3300042133 | Ga0450896_032211 | Ga0450896_032211_59_418 | 104 |
| 128 | 3300042436 | Ga0439435_0045656 | Ga0439435_0045656_330_656 | 104 |
| 129 | 3300042439 | Ga0439464_0054909 | Ga0439464_0054909_134_472 | 104 |
| 130 | 3300042439 | Ga0439464_0067386 | Ga0439464_0067386_133_492 | 104 |
| 131 | 3300042461 | Ga0439460_0179604 | Ga0439460_0179604_19_378 | 104 |
| 132 | 3300042530 | Ga0450916_022902 | Ga0450916_022902_106_423 | 104 |
| 133 | 3300042993 | Ga0439440_0233706 | Ga0439440_0233706_76_414 | 104 |
| 134 | 3300045051 | Ga0451576_0734722 | Ga0451576_0734722_11_349 | 104 |
| 135 | 3300046472 | Ga0495580_0015629 | Ga0495580_0015629_2225_2563 | 104 |
| 136 | 3300046531 | Ga0495665_0499446 | Ga0495665_0499446_83_421 | 104 |
| 137 | 3300046615 | Ga0495656_0745590 | Ga0495656_0745590_152_502 | 104 |
| 138 | 3300046642 | Ga0495634_0068785 | Ga0495634_0068785_594_932 | 104 |
| 139 | 3300046683 | Ga0495658_0835508 | Ga0495658_0835508_237_575 | 104 |
| 140 | 3300047471 | Ga0495684_0218442 | Ga0495684_0218442_206_544 | 104 |
| 141 | 3300049572 | Ga0501036_0418095 | Ga0501036_0418095_406_762 | 104 |
| 142 | 3300049572 | Ga0501036_0838152 | Ga0501036_0838152_371_730 | 104 |
| 143 | 3300049575 | Ga0501039_0655252 | Ga0501039_0655252_255_614 | 104 |
| 144 | 3300049577 | Ga0501041_0575040 | Ga0501041_0575040_91_450 | 104 |
| 145 | 3300049591 | Ga0501075_0195247 | Ga0501075_0195247_333_659 | 104 |
| 146 | 3300049592 | Ga0501076_0471804 | Ga0501076_0471804_467_817 | 104 |
| 147 | 3300049592 | Ga0501076_1100209 | Ga0501076_1100209_215_553 | 104 |
| 148 | 3300049592 | Ga0501076_1234761 | Ga0501076_1234761_47_406 | 104 |
| 149 | 3300049741 | Ga0501079_1378931 | Ga0501079_1378931_64_402 | 104 |
| 150 | 3300050490 | nmdc:mga03n38_300993_c1 | nmdc:mga03n38_300993_c1_327_692 | 104 |
| 151 | 3300050493 | nmdc:mga0k408_54190_c1 | nmdc:mga0k408_54190_c1_283_648 | 104 |
| 152 | 3300050494 | nmdc:mga06z11_44692_c1 | nmdc:mga06z11_44692_c1_1396_1761 | 104 |
| 153 | 3300050509 | nmdc:mga0qj67_350254_c1 | nmdc:mga0qj67_350254_c1_293_652 | 104 |
| 154 | 3300050510 | nmdc:mga06r32_313172_c1 | nmdc:mga06r32_313172_c1_871_1230 | 104 |
| 155 | 3300050510 | nmdc:mga06r32_698590_c1 | nmdc:mga06r32_698590_c1_190_555 | 104 |
| 156 | 3300050511 | nmdc:mga08y16_365066_c1 | nmdc:mga08y16_365066_c1_1120_1434 | 104 |
| 157 | 3300050514 | nmdc:mga08x19_20046_c1 | nmdc:mga08x19_20046_c1_24_365 | 104 |
| 158 | 3300054114 | Ga0501084_0179243 | Ga0501084_0179243_328_654 | 104 |
| 159 | 3300059421 | Ga0590071_000045 | Ga0590071_000045_4835_5194 | 104 |
| 160 | 3300059421 | Ga0590071_004156 | Ga0590071_004156_965_1324 | 104 |
| 161 | 3300059423 | Ga0590074_001780 | Ga0590074_001780_2132_2491 | 104 |
| 162 | 3300059424 | Ga0590075_001744 | Ga0590075_001744_270_629 | 104 |
| 163 | 3300059426 | Ga0590077_001139 | Ga0590077_001139_1302_1715 | 104 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3zo7-assembly1.cif.gz_F | crystal structure of clcfe27a with substrate | 0.7208 | 2 | 104 |
| 4fpi-assembly1.cif.gz_C | crystal structure of 5-chloromuconolactone isomerase from rhodococcus opacus 1cp | 0.6878 | 2 | 104 |
| 1s7i-assembly1.cif.gz_A-2 | 1.8 a crystal structure of a protein of unknown function pa1349 from pseudomonas aeruginosa | 0.6877 | 2 | 103 |
| 3znj-assembly1.cif.gz_3 | crystal structure of unliganded clcf from r.opacus 1cp in crystal form 1. | 0.6871 | 2 | 104 |
| 1s7i-assembly1.cif.gz_A-2 | 1.8 a crystal structure of a protein of unknown function pa1349 from pseudomonas aeruginosa | 0.672 | 2 | 103 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q5A0W4_540_618_3.30.70.1350 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain | 0.7992 | 13 | 40 | 3.30.70.1350 |
| 3znj100 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Dimeric alpha+beta barrel | 0.7034 | 2 | 104 | 3.30.70.1060 |
| 1s7iA00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Dimeric alpha+beta barrel | 0.6877 | 2 | 103 | 3.30.70.1060 |
| af_Q54X77_2_73_1.10.238.10 | Mainly Alpha;Orthogonal Bundle;Recoverin; domain 1;EF-hand | 0.6783 | 12 | 37 | 1.10.238.10 |
| af_Q91ZR4_1_82_3.30.200.20 | Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 | 0.6749 | 2 | 42 | 3.30.200.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V8SVA5-F1-model_v4 | Transcription initiation protein | 0.87 | 2 | 104 |
|
| AF-A0A7V8SVA5-F1-model_v4 | Transcription initiation protein | 0.8544 | 2 | 104 |
|
| AF-A0A317IEM6-F1-model_v4 | YCII-related domain-containing protein | 0.8454 | 2 | 104 |
|
| AF-A0A2V8VDM2-F1-model_v4 | YCII-related domain-containing protein | 0.8385 | 13 | 104 |
|
| AF-A0A317IEM6-F1-model_v4 | YCII-related domain-containing protein | 0.8308 | 2 | 104 |
|
Predicted Structure (AlphaFold2)
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