F242680

General Info

Members Datasets Scaffolds Average Seq Length
163 129 326 370

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0005592|Ga0500616_0005592_2713_4083
Length 451
Sequence MGPHESMQTHAASLGLMQSSQIAFDLQGNALLSPGPPKPTMSAEKVSLDGLRIDRSAIPKKERPAWLLPVIMILLAVAGGVTWWFMRPQPLPVQMAVAVEQSSGPTTTAQRTLLNGSGYVTARRIATVSAKVTGKVMEILVEEGMKVDENQVVARLDASNTKASLSLAEAQLESAKKALEETHPNLIYAEQELKRFKELAQSKAASQSDLNKADAEVKVLQAKLVRQSADVVVAQREVAQWEQQVDDSIVRSPFTGIVTSKNAQPGEMISPMSAGGSFTRTGICTVVDMSSLEIEVDVSESYINRVQAGQPVEAKLDAYADWNIPAKVIAIIPTADRQKATVKVRIGFEKLDPRILPEMGVKVSFQSAPQELAANTTARLVIVPKEAVHQDGGRNVAWVVKDGHVERRAITVNGTNAESTTIAAGLAAGEKLVLNAPPELKDGAKVTEKKS

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
67 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
82 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
85 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
86 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
93 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
115 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
129 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.16
Metatranscriptomes 1.23
Isolates 0.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.45
Nodule 0
Rhizoplane 4.91
Rhizosphere 89.57
Stem 0
Stem Tuber 0
Unclassified 3.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0005592 3300053153 Bacteria 8490
2 rootH2_10070941 3300003320 Bacteria 18619
3 rootL2_10069047 3300003322 Bacteria 6286
4 Ga0070683_100040412 3300005329 Bacteria 4289
5 Ga0070690_100029631 3300005330 Bacteria 3397
6 Ga0070690_100086405 3300005330 Bacteria 2059
7 Ga0070670_100042114 3300005331 Bacteria 3924
8 Ga0070670_100184639 3300005331 Bacteria 1811
9 Ga0070670_100204466 3300005331 Bacteria 1716
10 Ga0068869_100105534 3300005334 Bacteria 2137
11 Ga0070666_10100417 3300005335 Bacteria 1994
12 Ga0070682_100141444 3300005337 Bacteria 1641
13 Ga0070689_100011674 3300005340 Bacteria 6301
14 Ga0070689_100016629 3300005340 Bacteria 5384
15 Ga0070689_100085802 3300005340 Bacteria 2476
16 Ga0070687_100085783 3300005343 Bacteria 1729
17 Ga0070661_100058787 3300005344 Bacteria 2818
18 Ga0070675_100013008 3300005354 Bacteria 6534
19 Ga0070688_100035685 3300005365 Bacteria 3021
20 Ga0070713_100184844 3300005436 Unclassified 1875
21 Ga0070686_100085527 3300005544 Bacteria 2098
22 Ga0068856_100423000 3300005614 Bacteria 1352
23 Ga0070702_100141912 3300005615 Bacteria 1531
24 Ga0068859_100057634 3300005617 Bacteria 3912
25 Ga0068859_100135343 3300005617 Bacteria 2536
26 Ga0068864_100053255 3300005618 Bacteria 3490
27 Ga0068861_100000744 3300005719 Bacteria 19515
28 Ga0068863_100021230 3300005841 Bacteria 6199
29 Ga0068863_100146551 3300005841 Unclassified 2258
30 Ga0068858_100026425 3300005842 Bacteria 5393
31 Ga0068858_100269648 3300005842 Bacteria 1619
32 Ga0068860_100214291 3300005843 Bacteria 1869
33 Ga0068862_100050020 3300005844 Bacteria 3571
34 Ga0070712_100214425 3300006175 Unclassified 1520
35 Ga0075431_100017561 3300006847 Bacteria 7273
36 Ga0075434_100074775 3300006871 Bacteria 3381
37 Ga0097620_100057632 3300006931 Bacteria 3912
38 Ga0097620_100135352 3300006931 Bacteria 2536
39 Ga0099794_10028748 3300007265 Unclassified 2587
40 Ga0099795_10003440 3300007788 Bacteria 3916
41 Ga0105240_10000260 3300009093 Bacteria 104648
42 Ga0105240_10111757 3300009093 Bacteria 3304
43 Ga0105245_10003981 3300009098 Bacteria 13137
44 Ga0105247_10020011 3300009101 Bacteria 4023
45 Ga0105248_10178997 3300009177 Bacteria 2390
46 Ga0105237_10009072 3300009545 Bacteria 10687
47 Ga0105238_10244644 3300009551 Bacteria 1771
48 Ga0105239_10045487 3300010375 Bacteria 4811
49 Ga0105246_10095910 3300011119 Bacteria 2148
50 Ga0163162_10009558 3300013306 Bacteria 9435
51 Ga0157375_10001848 3300013308 Bacteria 18204
52 Ga0163163_10002587 3300014325 Bacteria 15326
53 Ga0163163_10022236 3300014325 Bacteria 6000
54 Ga0163163_10192720 3300014325 Unclassified 2086
55 Ga0157380_10013633 3300014326 Bacteria 5932
56 Ga0157379_10015507 3300014968 Bacteria 6688
57 Ga0209050_1001579 3300025298 Bacteria 23629
58 Ga0207705_10014557 3300025909 Bacteria 5660
59 Ga0207695_10000583 3300025913 Bacteria 74185
60 Ga0207662_10071290 3300025918 Bacteria 2104
61 Ga0207681_10095651 3300025923 Bacteria 2131
62 Ga0207700_10082878 3300025928 Bacteria 2509
63 Ga0207686_10189041 3300025934 Bacteria 1466
64 Ga0207670_10010252 3300025936 Bacteria 5389
65 Ga0207665_10050568 3300025939 Bacteria 2795
66 Ga0207711_10162826 3300025941 Bacteria 2021
67 Ga0207711_10211291 3300025941 Bacteria 1772
68 Ga0207661_10046229 3300025944 Bacteria 3451
69 Ga0207679_10024176 3300025945 Bacteria 4163
70 Ga0207651_10108876 3300025960 Bacteria 2075
71 Ga0207708_10032222 3300026075 Bacteria 3981
72 Ga0207702_10102857 3300026078 Bacteria 2525
73 Ga0207641_10073229 3300026088 Bacteria 2952
74 Ga0207676_10026382 3300026095 Bacteria 4322
75 Ga0207675_100084737 3300026118 Bacteria 2974
76 Ga0207428_10036994 3300027907 Bacteria 3975
77 Ga0268265_10022035 3300028380 Bacteria 4472
78 Ga0268264_10245680 3300028381 Bacteria 1660
79 Ga0265318_10012273 3300028577 Bacteria 3653
80 Ga0265323_10007338 3300028653 Bacteria 4587
81 Ga0265338_10029257 3300028800 Bacteria 5464
82 Ga0265338_10030722 3300028800 Bacteria 5283
83 Ga0265770_1000095 3300030878 Bacteria 10105
84 Ga0265760_10000864 3300031090 Bacteria 8770
85 Ga0265320_10000014 3300031240 Bacteria 208129
86 Ga0265320_10016054 3300031240 Bacteria 4208
87 Ga0265320_10088686 3300031240 Bacteria 1435
88 Ga0265339_10005706 3300031249 Bacteria 8258
89 Ga0265331_10036242 3300031250 Bacteria 2423
90 Ga0265327_10005607 3300031251 Bacteria 10400
91 Ga0307508_10000191 3300031616 Bacteria 74025
92 Ga0307516_10001589 3300031730 Bacteria 31238
93 Ga0307413_10067443 3300031824 Bacteria 2237
94 Ga0307406_10028161 3300031901 Bacteria 3392
95 Ga0307409_100138869 3300031995 Bacteria 2090
96 Ga0307409_100158769 3300031995 Bacteria 1974
97 Ga0307414_10000035 3300032004 Bacteria 175824
98 Ga0307414_10273668 3300032004 Bacteria 1415
99 Ga0373953_0032609 3300035117 Bacteria 2033
100 Ga0373954_0010788 3300035118 Bacteria 4040
101 Ga0373954_0070297 3300035118 Bacteria 1663
102 Ga0373937_0085165 3300036401 Bacteria 2925
103 Ga0439445_0023632 3300042004 Bacteria 1558
104 Ga0450894_007835 3300042131 Bacteria 1380
105 Ga0451577_0004004 3300042876 Bacteria 15853
106 Ga0451577_0007203 3300042876 Bacteria 10960
107 Ga0453683_0002405 3300044673 Bacteria 14587
108 Ga0453683_0018515 3300044673 Bacteria 4472
109 Ga0453684_0314565 3300044712 Bacteria 1775
110 Ga0451576_0000126 3300045051 Bacteria 193283
111 Ga0451576_0000409 3300045051 Bacteria 99890
112 Ga0451576_0002351 3300045051 Bacteria 28518
113 Ga0451576_0019268 3300045051 Bacteria 7449
114 Ga0451576_0049174 3300045051 Bacteria 4425
115 Ga0451576_0109444 3300045051 Bacteria 2875
116 Ga0495603_0049849 3300046455 Bacteria 2492
117 Ga0495638_0006119 3300046460 Bacteria 8809
118 Ga0495641_0014459 3300046461 Unclassified 4267
119 Ga0495664_0204345 3300046477 Bacteria 1197
120 Ga0495586_0004099 3300046535 Bacteria 7808
121 Ga0495634_0131926 3300046642 Bacteria 1592
122 Ga0496100_0127431 3300048903 Bacteria 1788
123 Ga0496104_0010693 3300048907 Bacteria 8204
124 Ga0496105_0002496 3300048908 Bacteria 13337
125 Ga0496109_0068530 3300048912 Bacteria 3252
126 Ga0496112_0090252 3300048915 Bacteria 3033
127 Ga0496114_0001915 3300048917 Bacteria 15845
128 Ga0496114_0036165 3300048917 Bacteria 4081
129 Ga0496115_0041802 3300048918 Bacteria 3649
130 Ga0501032_0003485 3300049569 Bacteria 12032
131 Ga0501033_0001624 3300049570 Bacteria 19757
132 Ga0501034_0027509 3300049571 Bacteria 5786
133 Ga0501036_0038728 3300049572 Bacteria 4035
134 Ga0501043_0112609 3300049579 Bacteria 2136
135 Ga0501047_0123389 3300049581 Bacteria 2470
136 Ga0501047_0126172 3300049581 Bacteria 2439
137 Ga0501067_0013480 3300049583 Bacteria 4530
138 Ga0501068_0006223 3300049584 Bacteria 6564
139 Ga0501071_0016285 3300049587 Bacteria 5112
140 Ga0501073_0008274 3300049589 Bacteria 7717
141 Ga0501073_0053110 3300049589 Bacteria 2837
142 Ga0501074_0002422 3300049590 Bacteria 12995
143 Ga0501075_0087025 3300049591 Bacteria 2368
144 Ga0501077_0013528 3300049593 Bacteria 5118
145 Ga0501079_0001152 3300049741 Bacteria 18486
146 Ga0501080_0005317 3300049742 Bacteria 11473
147 Ga0501080_0010387 3300049742 Bacteria 8518
148 Ga0501083_0000562 3300049744 Bacteria 23795
149 Ga0501083_0051848 3300049744 Bacteria 2758
150 Ga0501035_0033573 3300049822 Bacteria 4665
151 Ga0501035_0117097 3300049822 Bacteria 2332
152 Ga0501044_0002779 3300049823 Bacteria 19932
153 Ga0501044_0011150 3300049823 Bacteria 9746
154 nmdc:mga05p37_179218_c1 3300050507 Bacteria 2579
155 nmdc:mga06r32_9769_c1 3300050510 Bacteria 8663
156 nmdc:mga08y16_120115_c1 3300050511 Bacteria 2735
157 nmdc:mga0n895_102473_c1 3300050512 Bacteria 2873
158 Ga0495619_0114715 3300053085 Bacteria 1843
159 Ga0500559_0000645 3300053136 Bacteria 23521
160 Ga0500616_0045356 3300053153 Bacteria 2342
161 Ga0501084_0005791 3300054114 Bacteria 10166
162 Ga0501082_0015618 3300060353 Bacteria 6535
163 2788437132 2786546940 Bacteria 6396474
164 Ga0500616_0005592
165 rootH2_10070941
166 rootL2_10069047
167 Ga0070683_100040412
168 Ga0070690_100029631
169 Ga0070690_100086405
170 Ga0070670_100042114
171 Ga0070670_100184639
172 Ga0070670_100204466
173 Ga0068869_100105534
174 Ga0070666_10100417
175 Ga0070682_100141444
176 Ga0070689_100011674
177 Ga0070689_100016629
178 Ga0070689_100085802
179 Ga0070687_100085783
180 Ga0070661_100058787
181 Ga0070675_100013008
182 Ga0070688_100035685
183 Ga0070713_100184844
184 Ga0070686_100085527
185 Ga0068856_100423000
186 Ga0070702_100141912
187 Ga0068859_100057634
188 Ga0068859_100135343
189 Ga0068864_100053255
190 Ga0068861_100000744
191 Ga0068863_100021230
192 Ga0068863_100146551
193 Ga0068858_100026425
194 Ga0068858_100269648
195 Ga0068860_100214291
196 Ga0068862_100050020
197 Ga0070712_100214425
198 Ga0075431_100017561
199 Ga0075434_100074775
200 Ga0097620_100057632
201 Ga0097620_100135352
202 Ga0099794_10028748
203 Ga0099795_10003440
204 Ga0105240_10000260
205 Ga0105240_10111757
206 Ga0105245_10003981
207 Ga0105247_10020011
208 Ga0105248_10178997
209 Ga0105237_10009072
210 Ga0105238_10244644
211 Ga0105239_10045487
212 Ga0105246_10095910
213 Ga0163162_10009558
214 Ga0157375_10001848
215 Ga0163163_10002587
216 Ga0163163_10022236
217 Ga0163163_10192720
218 Ga0157380_10013633
219 Ga0157379_10015507
220 Ga0209050_1001579
221 Ga0207705_10014557
222 Ga0207695_10000583
223 Ga0207662_10071290
224 Ga0207681_10095651
225 Ga0207700_10082878
226 Ga0207686_10189041
227 Ga0207670_10010252
228 Ga0207665_10050568
229 Ga0207711_10162826
230 Ga0207711_10211291
231 Ga0207661_10046229
232 Ga0207679_10024176
233 Ga0207651_10108876
234 Ga0207708_10032222
235 Ga0207702_10102857
236 Ga0207641_10073229
237 Ga0207676_10026382
238 Ga0207675_100084737
239 Ga0207428_10036994
240 Ga0268265_10022035
241 Ga0268264_10245680
242 Ga0265318_10012273
243 Ga0265323_10007338
244 Ga0265338_10029257
245 Ga0265338_10030722
246 Ga0265770_1000095
247 Ga0265760_10000864
248 Ga0265320_10000014
249 Ga0265320_10016054
250 Ga0265320_10088686
251 Ga0265339_10005706
252 Ga0265331_10036242
253 Ga0265327_10005607
254 Ga0307508_10000191
255 Ga0307516_10001589
256 Ga0307413_10067443
257 Ga0307406_10028161
258 Ga0307409_100138869
259 Ga0307409_100158769
260 Ga0307414_10000035
261 Ga0307414_10273668
262 Ga0373953_0032609
263 Ga0373954_0010788
264 Ga0373954_0070297
265 Ga0373937_0085165
266 Ga0439445_0023632
267 Ga0450894_007835
268 Ga0451577_0004004
269 Ga0451577_0007203
270 Ga0453683_0002405
271 Ga0453683_0018515
272 Ga0453684_0314565
273 Ga0451576_0000126
274 Ga0451576_0000409
275 Ga0451576_0002351
276 Ga0451576_0019268
277 Ga0451576_0049174
278 Ga0451576_0109444
279 Ga0495603_0049849
280 Ga0495638_0006119
281 Ga0495641_0014459
282 Ga0495664_0204345
283 Ga0495586_0004099
284 Ga0495634_0131926
285 Ga0496100_0127431
286 Ga0496104_0010693
287 Ga0496105_0002496
288 Ga0496109_0068530
289 Ga0496112_0090252
290 Ga0496114_0001915
291 Ga0496114_0036165
292 Ga0496115_0041802
293 Ga0501032_0003485
294 Ga0501033_0001624
295 Ga0501034_0027509
296 Ga0501036_0038728
297 Ga0501043_0112609
298 Ga0501047_0123389
299 Ga0501047_0126172
300 Ga0501067_0013480
301 Ga0501068_0006223
302 Ga0501071_0016285
303 Ga0501073_0008274
304 Ga0501073_0053110
305 Ga0501074_0002422
306 Ga0501075_0087025
307 Ga0501077_0013528
308 Ga0501079_0001152
309 Ga0501080_0005317
310 Ga0501080_0010387
311 Ga0501083_0000562
312 Ga0501083_0051848
313 Ga0501035_0033573
314 Ga0501035_0117097
315 Ga0501044_0002779
316 Ga0501044_0011150
317 nmdc:mga05p37_179218_c1
318 nmdc:mga06r32_9769_c1
319 nmdc:mga08y16_120115_c1
320 nmdc:mga0n895_102473_c1
321 Ga0495619_0114715
322 Ga0500559_0000645
323 Ga0500616_0045356
324 Ga0501084_0005791
325 Ga0501082_0015618
326 2788437132

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

122

173

0.97

PF13437

HlyD_3

HlyD family secretion protein

249

358

0.92

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

111

361

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
6h2d-assembly1.cif.gz_S structure of the soluble ahlc of the tripartite alpha-pore forming toxin, ahl, from aeromonas hydrophila. 0.8354 100 171
5xu0-assembly1.cif.gz_C-2 structure of the membrane fusion protein spr0693 from streptococcus pneumoniae r6 0.7987 58 283
6v9z-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7985 99 171
8t3k-assembly1.cif.gz_C heterodimeric abc transporter bmrcd in the inward-facing conformation bound to atp: bmrcd_if-atp2 0.7835 100 171
5xu0-assembly1.cif.gz_C-2 structure of the membrane fusion protein spr0693 from streptococcus pneumoniae r6 0.7757 58 283
ID Description Score Start End Superfamily
3t51B01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9352 302 353 2.40.420.20
3oocA01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9111 302 358 2.40.420.20
3lnnA01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9073 302 355 2.40.420.20
3ne5C01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.893 302 361 2.40.420.20
af_I1N8W8_92_215_1.10.10.1740 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Transmembrane protein 14-like 0.8889 102 170 1.10.10.1740
ID Description Score Start End GO Terms
AF-A0A6F8NVC2-F1-model_v4 deleted 0.9457 301 372
AF-A0A5K7SF47-F1-model_v4 Co/Zn/Cd efflux system membrane fusion protein 0.9013 299 371 GO:0015562
GO:1990281
AF-A0A849MIK1-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.8086 55 290 GO:0015562
GO:1990281
AF-A0A1E4ZKZ7-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.8048 55 288 GO:0030313
AF-A0A286G5I6-F1-model_v4 RND family efflux transporter, MFP subunit 0.7941 55 287 GO:0015562
GO:1990281

Map