F241947

General Info

Members Datasets Scaffolds Average Seq Length
163 126 155 407

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10000326|Ga0307508_1000032640
Length 459
Sequence MRKDDPARTEPIRSSRKETSSKAHWITAPERLKPTTNKNRMKNAPQYLIAGCAQCTTAVLALCVFVMPATAGTVRSVGAMTFIDANTLVVADWRAGEIHALQLPPAAAVTPRPFNLMNVSSPIARALRVSADQLRFEDMAFRPGTELAYISLSITGKKSISRPALVAVDAAGAVTVLDLKRTPRTSAEIKSRPAADKFFWRDIPEATLTVTDLVYFDGKLYVAGLSNASFASTLRVYDFPFTGGATATSIEMYHPVHNEWETRAPIRKMAVVTLNGEPSLVAAFTCSPLVTIPLKDLKDGAHVTGKTIAELGWGSAPVDMVTFDRGQEPMVLLTHSHKSADLMSVSAIAKASAETGLTTPITWPSAPLLGLKSTYIPIAGVAHLGTQDADFFGALRRDEASGAMQLVSIRKGAFLRLSDFVNEYDFADFTYLPNDGFRDAHHQWRIDEGYPELAARAAR

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
3 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
4 2738543009 Luteibacter sp. OK325 Isolate Unclassified
5 2831864461 Roseateles noduli HZ7 Isolate Nodule
6 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
7 2857558681 Duganella sp. R-74565 Isolate Unclassified
8 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
9 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
10 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
14 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
15 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
16 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
17 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
44 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
60 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
69 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
73 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
74 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
75 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
76 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
77 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
78 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
79 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
80 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
81 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
84 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
85 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
86 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
87 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
88 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
89 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
90 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
91 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
92 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
98 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
99 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
100 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
101 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
102 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
103 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
108 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
109 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
110 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
117 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
118 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
119 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
120 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
121 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
122 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
123 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
124 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
125 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
126 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.09
Metatranscriptomes 0
Isolates 4.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.7
Nodule 1.84
Rhizoplane 2.45
Rhizosphere 57.06
Stem 0
Stem Tuber 0
Unclassified 15.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10013999 3300002067 Bacteria 2515
2 JGI24738J21930_10000181 3300002075 Bacteria 16257
3 rootH1_10009128 3300003316 Bacteria 5847
4 rootH1_10009128 3300003323 Bacteria 47126
5 rootH1_10226473 3300003323 Bacteria 3349
6 Ga0055539_1000157 3300003752 Bacteria 65224
7 Ga0055533_1000024 3300003756 Bacteria 338067
8 Ga0055525_1000011 3300003759 Bacteria 503124
9 Ga0055525_1001217 3300003759 Bacteria 5665
10 Ga0055537_1001831 3300003773 Bacteria 7693
11 Ga0055524_1000003 3300003775 Bacteria 399748
12 Ga0055530_10000139 3300003791 Bacteria 64639
13 Ga0055540_1000013 3300003792 Bacteria 262274
14 Ga0055531_10000943 3300003794 Bacteria 23415
15 Ga0065165_1001247 3300005262 Bacteria 28997
16 Ga0065165_1002883 3300005262 Bacteria 13220
17 Ga0070660_100120816 3300005339 Bacteria 2090
18 Ga0068855_100206381 3300005563 Bacteria 2210
19 Ga0068857_100081095 3300005577 Bacteria 2897
20 Ga0068856_100006968 3300005614 Bacteria 11044
21 Ga0068861_100137171 3300005719 Bacteria 1992
22 Ga0081540_1000437 3300005983 Bacteria 41175
23 Ga0081540_1059953 3300005983 Bacteria 1823
24 Ga0075366_10108297 3300006195 Unclassified 1671
25 Ga0075370_10052664 3300006353 Bacteria 2310
26 Ga0075434_100110423 3300006871 Bacteria 2761
27 Ga0099826_10000002 3300006948 Bacteria 1125830
28 Ga0075435_100018307 3300007076 Bacteria 5324
29 Ga0105240_10000971 3300009093 Bacteria 51114
30 Ga0114129_10009682 3300009147 Bacteria 13750
31 Ga0105237_10061625 3300009545 Bacteria 3750
32 Ga0105238_10013827 3300009551 Bacteria 8159
33 Ga0157372_10223371 3300013307 Bacteria 2183
34 Ga0182008_10003037 3300014497 Bacteria 10300
35 Ga0182006_1000427 3300015261 Bacteria 33649
36 Ga0213872_10000596 3300021361 Bacteria 27572
37 Ga0213872_10013822 3300021361 Bacteria 3775
38 Ga0209674_100007 3300025226 Bacteria 1077082
39 Ga0209563_100005 3300025230 Bacteria 1774893
40 Ga0209563_100052 3300025230 Bacteria 334307
41 Ga0207425_1000758 3300025245 Bacteria 16743
42 Ga0209677_100015 3300025253 Bacteria 532137
43 Ga0209565_1000401 3300025263 Bacteria 36272
44 Ga0209675_1000741 3300025291 Bacteria 22072
45 Ga0209025_1004834 3300025294 Bacteria 11379
46 Ga0209758_1011250 3300025297 Bacteria 5211
47 Ga0209758_1031191 3300025297 Bacteria 2192
48 Ga0209050_1000340 3300025298 Bacteria 92794
49 Ga0209256_1000007 3300025299 Bacteria 1136599
50 Ga0209051_1000022 3300025303 Bacteria 474879
51 Ga0209051_1000610 3300025303 Bacteria 41472
52 Ga0209257_1000030 3300025304 Bacteria 689812
53 Ga0207647_10074239 3300025904 Bacteria 2048
54 Ga0207705_10053511 3300025909 Bacteria 2908
55 Ga0207695_10001952 3300025913 Bacteria 32013
56 Ga0207657_10088320 3300025919 Bacteria 2591
57 Ga0207667_10106354 3300025949 Bacteria 2894
58 Ga0207639_10027169 3300026041 Bacteria 4165
59 Ga0209282_1000001 3300027666 Bacteria 2450367
60 Ga0307517_10000360 3300028786 Bacteria 78173
61 Ga0307515_10000049 3300028794 Bacteria 278611
62 Ga0307515_10008957 3300028794 Bacteria 19443
63 Ga0307515_10029343 3300028794 Bacteria 9302
64 Ga0307515_10052736 3300028794 Bacteria 6023
65 Ga0307515_10056306 3300028794 Bacteria 5718
66 Ga0307513_10008434 3300031456 Bacteria 13194
67 Ga0307509_10000823 3300031507 Bacteria 53217
68 Ga0307509_10009520 3300031507 Bacteria 12118
69 Ga0307509_10155860 3300031507 Unclassified 2190
70 Ga0307408_100000071 3300031548 Bacteria 116933
71 Ga0307508_10000326 3300031616 Bacteria 57425
72 Ga0307508_10001048 3300031616 Bacteria 32001
73 Ga0307514_10001231 3300031649 Bacteria 33814
74 Ga0307514_10005406 3300031649 Bacteria 11421
75 Ga0265314_10117086 3300031711 Bacteria 1684
76 Ga0307518_10039514 3300031838 Unclassified 3430
77 Ga0307412_10000203 3300031911 Bacteria 40488
78 Ga0307507_10023854 3300033179 Bacteria 6692
79 Ga0307510_10033658 3300033180 Bacteria 5752
80 Ga0436361_0736182 3300039447 Bacteria 4390
81 Ga0436361_0746629 3300039447 Bacteria 27612
82 Ga0436361_0997252 3300039447 Bacteria 6064
83 Ga0439436_0000006 3300041404 Bacteria 123245
84 Ga0439438_003410 3300041405 Bacteria 6433
85 Ga0495591_015863 3300046458 Bacteria 2645
86 Ga0495638_0062155 3300046460 Unclassified 2306
87 Ga0495638_0116442 3300046460 Bacteria 1583
88 Ga0495650_0000097 3300046471 Bacteria 216051
89 Ga0495605_0005309 3300046474 Bacteria 7513
90 Ga0495585_0005723 3300046492 Bacteria 7798
91 Ga0495585_0013087 3300046492 Bacteria 4865
92 Ga0495594_0054327 3300046499 Bacteria 2207
93 Ga0495596_0000535 3300046500 Bacteria 23893
94 Ga0495607_0001587 3300046501 Bacteria 19793
95 Ga0495606_0000210 3300046507 Bacteria 103488
96 Ga0495606_0004833 3300046507 Bacteria 13223
97 Ga0495606_0010816 3300046507 Bacteria 7519
98 Ga0495606_0073567 3300046507 Unclassified 2144
99 Ga0495610_0001983 3300046512 Bacteria 17467
100 Ga0495610_0006433 3300046512 Bacteria 8089
101 Ga0495610_0013804 3300046512 Bacteria 4778
102 Ga0495610_0072980 3300046512 Bacteria 1596
103 Ga0495616_0000050 3300046513 Bacteria 108049
104 Ga0495616_0044684 3300046513 Bacteria 2246
105 Ga0495631_0000363 3300046518 Bacteria 31311
106 Ga0495631_0007785 3300046518 Bacteria 5434
107 Ga0495631_0022348 3300046518 Bacteria 2941
108 Ga0495632_0000155 3300046519 Bacteria 70814
109 Ga0495632_0001607 3300046519 Bacteria 18599
110 Ga0495648_0015851 3300046524 Bacteria 5449
111 Ga0495648_0070539 3300046524 Bacteria 2030
112 Ga0495642_0000136 3300046528 Bacteria 42707
113 Ga0495654_0003006 3300046530 Bacteria 10532
114 Ga0495609_0007518 3300046538 Bacteria 5431
115 Ga0495633_0000904 3300046558 Bacteria 25311
116 Ga0495668_0011579 3300046616 Bacteria 5274
117 Ga0495668_0015759 3300046616 Bacteria 4406
118 Ga0495625_0012533 3300046660 Bacteria 6865
119 Ga0495625_0033186 3300046660 Bacteria 3820
120 Ga0495661_0126002 3300046665 Bacteria 1409
121 Ga0495588_0053144 3300046674 Bacteria 2088
122 Ga0495669_0000539 3300046684 Bacteria 17061
123 Ga0495670_0006010 3300046691 Bacteria 5947
124 Ga0495670_0008899 3300046691 Bacteria 4938
125 Ga0495670_0045853 3300046691 Bacteria 2183
126 Ga0495660_0008219 3300046810 Bacteria 6114
127 Ga0495660_0022548 3300046810 Bacteria 3594
128 Ga0495683_0007787 3300047323 Bacteria 5752
129 Ga0495673_0047372 3300047469 Unclassified 1900
130 Ga0495681_0000466 3300047470 Bacteria 30983
131 Ga0495626_0015938 3300048091 Bacteria 3834
132 Ga0496102_0001016 3300048905 Bacteria 26180
133 Ga0496102_0256609 3300048905 Bacteria 1648
134 Ga0496104_0037830 3300048907 Bacteria 4512
135 Ga0496115_0000044 3300048918 Bacteria 115745
136 Ga0496119_0009445 3300048922 Bacteria 8369
137 Ga0496122_0011755 3300048925 Bacteria 8819
138 Ga0496123_0004153 3300048926 Bacteria 15492
139 Ga0495682_0019453 3300049460 Bacteria 2553
140 Ga0501032_0001605 3300049569 Bacteria 18029
141 Ga0501036_0200061 3300049572 Bacteria 1680
142 Ga0501047_0115177 3300049581 Bacteria 2570
143 Ga0501044_0001621 3300049823 Bacteria 26363
144 nmdc:mga05p37_70844_c1 3300050507 Bacteria 4288
145 nmdc:mga0n895_62225_c1 3300050512 Bacteria 3688
146 nmdc:mga0rr50_12593_c1 3300050513 Bacteria 5475
147 Ga0500635_0000034 3300053080 Bacteria 96919
148 Ga0500578_0000192 3300053086 Bacteria 73995
149 Ga0500646_0002599 3300053090 Bacteria 4681
150 Ga0500562_005222 3300053108 Bacteria 3262
151 Ga0500594_0006344 3300053118 Bacteria 2652
152 Ga0500568_0012840 3300053139 Bacteria 3837
153 Ga0500604_0003007 3300053151 Bacteria 4525
154 Ga0500636_0061223 3300053177 Bacteria 2197
155 Ga0500587_000351 3300053739 Bacteria 5241

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046691 Ga0495670_0045853 Ga0495670_0045853_10_1128 363
2 3300003323 rootH1_10226473 rootH1_102264733 372
3 3300028786 Ga0307517_10000360 Ga0307517_1000036028 372
4 3300047469 Ga0495673_0047372 Ga0495673_0047372_17_1159 372
5 3300003759 Ga0055525_1000011 Ga0055525_1000011308 376
6 3300025230 Ga0209563_100005 Ga0209563_100005634 376
7 3300046518 Ga0495631_0022348 Ga0495631_0022348_1381_2619 376
8 3300046524 Ga0495648_0070539 Ga0495648_0070539_17_1255 376
9 3300046660 Ga0495625_0033186 Ga0495625_0033186_2111_3349 376
10 3300046665 Ga0495661_0126002 Ga0495661_0126002_83_1321 376
11 3300046810 Ga0495660_0008219 Ga0495660_0008219_4586_5824 376
12 3300048905 Ga0496102_0256609 Ga0496102_0256609_489_1637 376
13 3300053090 Ga0500646_0002599 Ga0500646_0002599_1801_3087 380
14 3300046500 Ga0495596_0000535 Ga0495596_0000535_15817_16983 384
15 3300046507 Ga0495606_0073567 Ga0495606_0073567_152_1318 384
16 3300046513 Ga0495616_0044684 Ga0495616_0044684_607_1773 384
17 3300046518 Ga0495631_0000363 Ga0495631_0000363_25626_26792 384
18 3300046616 Ga0495668_0011579 Ga0495668_0011579_1591_2757 384
19 3300046616 Ga0495668_0015759 Ga0495668_0015759_2630_3796 384
20 3300046810 Ga0495660_0022548 Ga0495660_0022548_851_2017 384
21 3300047323 Ga0495683_0007787 Ga0495683_0007787_4202_5368 384
22 3300047470 Ga0495681_0000466 Ga0495681_0000466_25626_26792 384
23 3300048091 Ga0495626_0015938 Ga0495626_0015938_1434_2600 384
24 3300053080 Ga0500635_0000034 Ga0500635_0000034_23319_24566 387
25 3300005563 Ga0068855_100206381 Ga0068855_1002063813 389
26 3300009093 Ga0105240_10000971 Ga0105240_1000097118 389
27 3300009545 Ga0105237_10061625 Ga0105237_100616253 389
28 3300025913 Ga0207695_10001952 Ga0207695_1000195218 389
29 3300025949 Ga0207667_10106354 Ga0207667_101063543 389
30 3300049569 Ga0501032_0001605 Ga0501032_0001605_10783_12039 389
31 3300049572 Ga0501036_0200061 Ga0501036_0200061_172_1428 389
32 3300049823 Ga0501044_0001621 Ga0501044_0001621_14330_15586 389
33 3300046460 Ga0495638_0062155 Ga0495638_0062155_245_1441 390
34 3300046524 Ga0495648_0015851 Ga0495648_0015851_2392_3588 390
35 3300046660 Ga0495625_0012533 Ga0495625_0012533_2803_3999 390
36 3300003791 Ga0055530_10000139 Ga0055530_1000013921 392
37 3300003792 Ga0055540_1000013 Ga0055540_100001321 392
38 3300003794 Ga0055531_10000943 Ga0055531_1000094322 392
39 3300013307 Ga0157372_10223371 Ga0157372_102233713 392
40 3300025298 Ga0209050_1000340 Ga0209050_100034062 392
41 3300025303 Ga0209051_1000022 Ga0209051_1000022246 392
42 3300025304 Ga0209257_1000030 Ga0209257_1000030444 392
43 3300053108 Ga0500562_005222 Ga0500562_005222_645_1850 392
44 3300005719 Ga0068861_100137171 Ga0068861_1001371713 393
45 3300003775 Ga0055524_1000003 Ga0055524_1000003343 394
46 3300006948 Ga0099826_10000002 Ga0099826_10000002762 394
47 3300025299 Ga0209256_1000007 Ga0209256_100000724 394
48 3300027666 Ga0209282_1000001 Ga0209282_1000001393 394
49 3300046501 Ga0495607_0001587 Ga0495607_0001587_14304_15512 394
50 3300046507 Ga0495606_0000210 Ga0495606_0000210_53195_54403 394
51 3300005614 Ga0068856_100006968 Ga0068856_1000069685 395
52 3300009551 Ga0105238_10013827 Ga0105238_1001382711 395
53 3300031507 Ga0307509_10155860 Ga0307509_101558602 395
54 3300031711 Ga0265314_10117086 Ga0265314_101170862 395
55 3300031838 Ga0307518_10039514 Ga0307518_100395143 395
56 3300046471 Ga0495650_0000097 Ga0495650_0000097_198009_199304 395
57 3300046507 Ga0495606_0010816 Ga0495606_0010816_4638_5855 395
58 3300046512 Ga0495610_0001983 Ga0495610_0001983_11590_12807 395
59 3300046512 Ga0495610_0013804 Ga0495610_0013804_2093_3310 395
60 3300046558 Ga0495633_0000904 Ga0495633_0000904_4616_5833 395
61 3300031548 Ga0307408_100000071 Ga0307408_10000007154 396
62 3300048905 Ga0496102_0001016 Ga0496102_0001016_10585_11856 396
63 3300048925 Ga0496122_0011755 Ga0496122_0011755_7341_8591 396
64 3300048926 Ga0496123_0004153 Ga0496123_0004153_8406_9656 396
65 3300003773 Ga0055537_1001831 Ga0055537_10018311 397
66 3300006195 Ga0075366_10108297 Ga0075366_101082972 397
67 3300025245 Ga0207425_1000758 Ga0207425_10007586 397
68 3300025263 Ga0209565_1000401 Ga0209565_100040114 397
69 3300025291 Ga0209675_1000741 Ga0209675_100074112 397
70 3300025294 Ga0209025_1004834 Ga0209025_10048345 397
71 3300025297 Ga0209758_1011250 Ga0209758_10112505 397
72 3300026041 Ga0207639_10027169 Ga0207639_100271692 398
73 3300028794 Ga0307515_10008957 Ga0307515_1000895715 398
74 3300031507 Ga0307509_10009520 Ga0307509_100095205 398
75 3300031616 Ga0307508_10001048 Ga0307508_100010489 398
76 3300031649 Ga0307514_10005406 Ga0307514_1000540612 398
77 3300033179 Ga0307507_10023854 Ga0307507_100238543 398
78 3300053086 Ga0500578_0000192 Ga0500578_0000192_9160_10398 398
79 3300003752 Ga0055539_1000157 Ga0055539_100015738 399
80 3300003756 Ga0055533_1000024 Ga0055533_1000024297 399
81 3300003759 Ga0055525_1001217 Ga0055525_10012173 399
82 3300005262 Ga0065165_1001247 Ga0065165_100124722 399
83 3300006353 Ga0075370_10052664 Ga0075370_100526642 399
84 3300025226 Ga0209674_100007 Ga0209674_100007337 399
85 3300025230 Ga0209563_100052 Ga0209563_100052273 399
86 3300025253 Ga0209677_100015 Ga0209677_100015453 399
87 3300033180 Ga0307510_10033658 Ga0307510_100336582 399
88 3300046460 Ga0495638_0116442 Ga0495638_0116442_327_1553 399
89 3300046512 Ga0495610_0072980 Ga0495610_0072980_294_1520 399
90 3300053118 Ga0500594_0006344 Ga0500594_0006344_789_2015 399
91 3300053151 Ga0500604_0003007 Ga0500604_0003007_1594_2880 399
92 3300053177 Ga0500636_0061223 Ga0500636_0061223_127_1353 399
93 3300053739 Ga0500587_000351 Ga0500587_000351_2955_4181 399
94 iso_pu_bacteria 2588253510 2588290810 399
95 iso_pu_bacteria 2831864461 2831869632 399
96 3300003316 rootH1_10009128 rootH1_100091282 400
97 3300005577 Ga0068857_100081095 Ga0068857_1000810952 400
98 3300021361 Ga0213872_10000596 Ga0213872_100005966 400
99 3300021361 Ga0213872_10013822 Ga0213872_100138223 400
100 3300025303 Ga0209051_1000610 Ga0209051_100061024 400
101 3300028794 Ga0307515_10000049 Ga0307515_10000049192 400
102 3300028794 Ga0307515_10029343 Ga0307515_1002934310 400
103 3300028794 Ga0307515_10052736 Ga0307515_100527362 400
104 3300028794 Ga0307515_10056306 Ga0307515_100563062 400
105 3300031456 Ga0307513_10008434 Ga0307513_1000843410 400
106 3300031507 Ga0307509_10000823 Ga0307509_1000082317 400
107 3300031616 Ga0307508_10000326 Ga0307508_1000032640 400
108 3300031649 Ga0307514_10001231 Ga0307514_1000123110 400
109 3300039447 Ga0436361_0746629 Ga0436361_0746629_16344_17618 400
110 3300039447 Ga0436361_0997252 Ga0436361_0997252_890_2158 400
111 3300046492 Ga0495585_0013087 Ga0495585_0013087_3389_4633 400
112 3300046519 Ga0495632_0001607 Ga0495632_0001607_17166_18410 400
113 3300053139 Ga0500568_0012840 Ga0500568_0012840_214_1458 400
114 iso_pu_bacteria 2585428057 2587730277 401
115 3300049581 Ga0501047_0115177 Ga0501047_0115177_748_1956 402
116 iso_pu_bacteria 2857558681 2857559313 402
117 3300050507 nmdc:mga05p37_70844_c1 nmdc:mga05p37_70844_c1_2180_3400 405
118 3300050512 nmdc:mga0n895_62225_c1 nmdc:mga0n895_62225_c1_1726_2946 405
119 iso_pu_bacteria 2643221562 2643830474 405
120 iso_pu_bacteria 2738543009 2739226316 405
121 iso_pu_bacteria 2842918807 2842921586 405
122 iso_pu_bacteria 2953994433 2953997600 405
123 3300005339 Ga0070660_100120816 Ga0070660_1001208162 408
124 3300005983 Ga0081540_1000437 Ga0081540_10004373 408
125 3300005983 Ga0081540_1059953 Ga0081540_10599532 408
126 3300025909 Ga0207705_10053511 Ga0207705_100535112 408
127 3300025919 Ga0207657_10088320 Ga0207657_100883203 408
128 3300046458 Ga0495591_015863 Ga0495591_015863_613_1878 408
129 3300046474 Ga0495605_0005309 Ga0495605_0005309_5762_6988 408
130 3300046492 Ga0495585_0005723 Ga0495585_0005723_6021_7250 408
131 3300046499 Ga0495594_0054327 Ga0495594_0054327_702_1928 408
132 3300046513 Ga0495616_0000050 Ga0495616_0000050_9821_11047 408
133 3300046518 Ga0495631_0007785 Ga0495631_0007785_49_1275 408
134 3300046519 Ga0495632_0000155 Ga0495632_0000155_47903_49129 408
135 3300046528 Ga0495642_0000136 Ga0495642_0000136_18310_19536 408
136 3300046530 Ga0495654_0003006 Ga0495654_0003006_9262_10488 408
137 3300046538 Ga0495609_0007518 Ga0495609_0007518_190_1416 408
138 3300046674 Ga0495588_0053144 Ga0495588_0053144_532_1758 408
139 3300046684 Ga0495669_0000539 Ga0495669_0000539_281_1507 408
140 3300046691 Ga0495670_0008899 Ga0495670_0008899_1857_3083 408
141 3300049460 Ga0495682_0019453 Ga0495682_0019453_656_1882 408
142 3300002067 JGI24735J21928_10013999 JGI24735J21928_100139992 409
143 3300002075 JGI24738J21930_10000181 JGI24738J21930_100001817 409
144 3300005262 Ga0065165_1002883 Ga0065165_10028838 409
145 3300006871 Ga0075434_100110423 Ga0075434_1001104233 409
146 3300007076 Ga0075435_100018307 Ga0075435_1000183074 409
147 3300009147 Ga0114129_10009682 Ga0114129_1000968216 409
148 3300014497 Ga0182008_10003037 Ga0182008_100030374 409
149 3300015261 Ga0182006_1000427 Ga0182006_10004274 409
150 3300025297 Ga0209758_1031191 Ga0209758_10311912 409
151 3300025904 Ga0207647_10074239 Ga0207647_100742391 409
152 3300031911 Ga0307412_10000203 Ga0307412_1000020330 409
153 3300039447 Ga0436361_0736182 Ga0436361_0736182_1837_3066 409
154 3300041404 Ga0439436_0000006 Ga0439436_0000006_49060_50289 409
155 3300041405 Ga0439438_003410 Ga0439438_003410_3437_4669 409
156 3300046471 Ga0495650_0000097 Ga0495650_0000097_209007_210239 409
157 3300046507 Ga0495606_0004833 Ga0495606_0004833_10770_12002 409
158 3300046512 Ga0495610_0006433 Ga0495610_0006433_6181_7410 409
159 3300046691 Ga0495670_0006010 Ga0495670_0006010_3694_4923 409
160 3300048907 Ga0496104_0037830 Ga0496104_0037830_1576_2805 409
161 3300048918 Ga0496115_0000044 Ga0496115_0000044_69066_70295 409
162 3300048922 Ga0496119_0009445 Ga0496119_0009445_3748_4977 409
163 3300050513 nmdc:mga0rr50_12593_c1 nmdc:mga0rr50_12593_c1_2760_3992 409

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tdg-assembly1.cif.gz_A-2 structural and functional characterization of helicobacter pylori dsbg 0.7318 68 123
8fwi-assembly1.cif.gz_A structure of dodecameric kaic-rs-s413e/s414e solved by cryo-em 0.6737 261 293
4j2j-assembly3.cif.gz_C crystal structure of axh domain complex with capicua 0.6551 71 114
4kvh-assembly1.cif.gz_A-2 crystal structure of ketosteroid isomerase fold protein hmuk_0747 0.5996 73 128
2w4o-assembly1.cif.gz_A crystal structure of human camk4 in complex with 4-amino(sulfamoyl- phenylamino)-triazole-carbothioic acid (2,6-difluoro-phenyl)-amide) 0.593 52 114
ID Description Score Start End Superfamily
af_O14242_1_307_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8038 265 295 3.40.1190.20
4ux5A00 Alpha Beta;Roll;Mlu1-box Binding Protein; DNA-binding Domain;Transcription regulator HTH, APSES-type DNA-binding domain 0.7544 213 239 3.10.260.10
3tdgA01 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.7318 68 123 3.10.450.520
af_A0A5K1K8T1_70_201_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.6979 155 295 1.25.10.10
af_Q557H6_34_95_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.6882 79 122 2.30.30.30
ID Description Score Start End GO Terms
AF-A0A850N3P6-F1-model_v4 deleted 0.9591 23 409
AF-A0A850N3P6-F1-model_v4 deleted 0.9566 23 409
AF-A0A1J0LQE5-F1-model_v4 Uncharacterized protein 0.9423 155 280
AF-L8JHK5-F1-model_v4 Uncharacterized protein 0.9367 1 406
AF-A0A7Y5D1Q2-F1-model_v4 Uncharacterized protein 0.9339 19 361

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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