F240261

General Info

Members Datasets Scaffolds Average Seq Length
162 130 324 206

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0021358|Ga0501034_0021358_5786_6448
Length 208
Sequence MTTQHTQTLGIIGAGNIGSNVARAAIAAGYDVVISNSRGPETLTDLIEDLGPKARAALVAVPLGKYKNVPVEGLAGKVVMDANNYYPQRDGRIPALDNNENTTSGLLQEHLPTSKVVKAFNSIRATDIPTTGSPAGTPDRRALPIAGNDADARAQVAKFLDDIGFDAVDLGTLDESWKVERDTPAYVKRTTADELTNLTANVNRVRQL

Samples

Sample ID Description Type Environment
1 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
15 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
16 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
17 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
25 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
28 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
40 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
41 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
42 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
43 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
44 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
45 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
46 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
47 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
50 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
51 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
52 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
53 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
54 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
55 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
56 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
57 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
58 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
59 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
60 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
61 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
62 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
63 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
64 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
65 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
66 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
67 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
68 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
69 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
70 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
71 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
72 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
73 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
74 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
75 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
76 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
79 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
80 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
81 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
82 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
83 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
84 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
85 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
86 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
87 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
96 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
97 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
98 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
99 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
100 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
101 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
102 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
103 2643221566 Microbacterium sp. Root166 Isolate Unclassified
104 2643221572 Leifsonia sp. Root60 Isolate Unclassified
105 2643221575 Microbacterium sp. Root61 Isolate Unclassified
106 2643221597 Microbacterium sp. Root180 Isolate Unclassified
107 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
108 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
109 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
110 2773857759 Microbacterium sp. 1294 Isolate Unclassified
111 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
112 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
113 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
114 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
115 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
116 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
117 2919069694 Microbacterium sp. 1154 Isolate Unclassified
118 2919395869 Microbacterium resistens 2980 Isolate Unclassified
119 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
120 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
121 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
122 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
123 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
124 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
125 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
126 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
127 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
128 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
129 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
130 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.01
Metatranscriptomes 3.09
Isolates 17.9

Biome Distribution

Category Percentage (%)
Aerial Root 1.23
Bulb 0
Endosphere 9.26
Nodule 0
Rhizoplane 11.73
Rhizosphere 52.47
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501034_0021358 3300049571 Bacteria 6600
2 LJQas_1010680 3300000549 Bacteria 1097
3 rootL2_10096970 3300003322 Bacteria 2197
4 Ga0065714_10076671 3300005288 Bacteria 2767
5 Ga0070658_10000162 3300005327 Bacteria 58038
6 Ga0070658_10550767 3300005327 Bacteria 998
7 Ga0070658_10570636 3300005327 Bacteria 980
8 Ga0070682_100242693 3300005337 Bacteria 1294
9 Ga0070659_100032331 3300005366 Bacteria 4057
10 Ga0070663_100088165 3300005455 Bacteria 2294
11 Ga0068853_100454596 3300005539 Bacteria 1205
12 Ga0068855_100071290 3300005563 Bacteria 4041
13 Ga0068855_100130751 3300005563 Bacteria 2867
14 Ga0075365_10058463 3300006038 Bacteria 2567
15 Ga0075365_10277413 3300006038 Bacteria 1179
16 Ga0075363_100125071 3300006048 Bacteria 1439
17 Ga0075364_10056554 3300006051 Bacteria 2568
18 Ga0075367_10005384 3300006178 Bacteria 6347
19 Ga0075369_10003630 3300006186 Bacteria 5634
20 Ga0075370_10008130 3300006353 Bacteria 5385
21 Ga0105244_10051452 3300009036 Bacteria 2099
22 Ga0105244_10051454 3300009036 Bacteria 2099
23 Ga0105243_10026650 3300009148 Bacteria 4425
24 Ga0105243_10192159 3300009148 Bacteria 1784
25 Ga0105246_10058182 3300011119 Bacteria 2677
26 Ga0157370_10042429 3300013104 Bacteria 4384
27 Ga0157370_10092286 3300013104 Bacteria 2842
28 Ga0157369_10894475 3300013105 Bacteria 911
29 Ga0157375_10570745 3300013308 Bacteria 1292
30 Ga0157375_11653905 3300013308 Bacteria 758
31 Ga0163163_10848676 3300014325 Bacteria 977
32 Ga0157380_10014289 3300014326 Bacteria 5808
33 Ga0157380_10207375 3300014326 Bacteria 1744
34 Ga0197907_10916476 3300020069 Bacteria 1320
35 Ga0206356_10247841 3300020070 Bacteria 859
36 Ga0206355_1568077 3300020076 Bacteria 743
37 Ga0206354_11448225 3300020081 Bacteria 2110
38 Ga0206353_10446287 3300020082 Bacteria 1257
39 Ga0207655_1003481 3300025728 Bacteria 11695
40 Ga0207655_1020426 3300025728 Bacteria 3404
41 Ga0207643_10053316 3300025908 Bacteria 2297
42 Ga0207705_10000001 3300025909 Bacteria 2061880
43 Ga0207705_10297226 3300025909 Bacteria 1238
44 Ga0207681_10358648 3300025923 Bacteria 1169
45 Ga0207690_10021035 3300025932 Bacteria 4041
46 Ga0207667_10143229 3300025949 Bacteria 2461
47 Ga0207667_10221851 3300025949 Bacteria 1937
48 Ga0207668_10043461 3300025972 Bacteria 3050
49 Ga0207678_10025024 3300026067 Bacteria 5212
50 Ga0207678_10555503 3300026067 Bacteria 1004
51 Ga0207675_100487389 3300026118 Bacteria 1226
52 Ga0395901_0143128 3300038443 Bacteria 2513
53 Ga0451791_1071581 3300041451 Bacteria 2613
54 Ga0451793_1295899 3300041452 Bacteria 1397
55 Ga0451797_1101593 3300041453 Bacteria 1738
56 Ga0451837_0479497 3300041494 Bacteria 1119
57 Ga0451839_1455646 3300041496 Bacteria 916
58 Ga0451841_0346238 3300041498 Bacteria 781
59 Ga0451843_0240887 3300041509 Bacteria 814
60 Ga0466965_0012974 3300044683 Bacteria 3925
61 Ga0453684_0160031 3300044712 Bacteria 2664
62 Ga0495629_0128073 3300046459 Bacteria 1769
63 Ga0495653_0002119 3300046463 Bacteria 15632
64 Ga0495582_0020952 3300046473 Bacteria 3580
65 Ga0495582_0312271 3300046473 Bacteria 904
66 Ga0495662_0006596 3300046476 Bacteria 5792
67 Ga0495664_0005552 3300046477 Bacteria 6932
68 Ga0495594_0144654 3300046499 Bacteria 1349
69 Ga0495665_0000504 3300046531 Bacteria 19671
70 Ga0495586_0028447 3300046535 Bacteria 2990
71 Ga0495587_0001568 3300046536 Bacteria 15196
72 Ga0495645_0007284 3300046543 Bacteria 7696
73 Ga0495667_0003032 3300046559 Bacteria 11257
74 Ga0495634_0150207 3300046642 Bacteria 1474
75 Ga0495657_0044311 3300046675 Bacteria 3027
76 Ga0495623_0081900 3300046679 Bacteria 1995
77 Ga0495600_0003410 3300046809 Bacteria 9352
78 Ga0495581_0028398 3300047315 Bacteria 3242
79 Ga0495581_0084862 3300047315 Bacteria 1835
80 Ga0495680_0213017 3300047322 Bacteria 1382
81 Ga0495675_0097286 3300047444 Bacteria 1844
82 Ga0496101_1051831 3300048904 Bacteria 640
83 Ga0496104_0102171 3300048907 Bacteria 2745
84 Ga0496105_0012940 3300048908 Bacteria 6611
85 Ga0496105_0349905 3300048908 Bacteria 1180
86 Ga0496108_0137026 3300048911 Bacteria 2107
87 Ga0496109_0136011 3300048912 Bacteria 2296
88 Ga0496110_0168601 3300048913 Bacteria 1986
89 Ga0496111_0161682 3300048914 Bacteria 1663
90 Ga0496112_0414074 3300048915 Bacteria 1287
91 Ga0496113_0074215 3300048916 Bacteria 2593
92 Ga0496113_0284624 3300048916 Bacteria 1322
93 Ga0496114_0041269 3300048917 Bacteria 3823
94 Ga0496114_0080231 3300048917 Bacteria 2756
95 Ga0496114_0139290 3300048917 Bacteria 2099
96 Ga0496114_0321729 3300048917 Bacteria 1367
97 Ga0496115_0198993 3300048918 Bacteria 1655
98 Ga0496116_0010156 3300048919 Bacteria 7927
99 Ga0496118_0032555 3300048921 Bacteria 4291
100 Ga0496118_0072562 3300048921 Bacteria 2471
101 Ga0496118_0086331 3300048921 Bacteria 2180
102 Ga0496119_0011902 3300048922 Bacteria 7138
103 Ga0496119_0065292 3300048922 Bacteria 2156
104 Ga0496120_0001498 3300048923 Bacteria 27651
105 Ga0496120_0157557 3300048923 Bacteria 1135
106 Ga0496121_0000025 3300048924 Bacteria 453467
107 Ga0496121_0371744 3300048924 Bacteria 946
108 Ga0496122_0000071 3300048925 Bacteria 222537
109 Ga0496122_0003842 3300048925 Bacteria 19299
110 Ga0496122_0005844 3300048925 Bacteria 14449
111 Ga0496122_0373307 3300048925 Bacteria 735
112 Ga0496123_0000006 3300048926 Bacteria 647258
113 Ga0496124_0047668 3300048927 Bacteria 3664
114 Ga0496125_0000047 3300048928 Bacteria 294084
115 Ga0496126_0019044 3300048929 Bacteria 6775
116 Ga0501032_0081358 3300049569 Bacteria 2155
117 Ga0501034_0011821 3300049571 Bacteria 9036
118 Ga0501034_0119596 3300049571 Bacteria 2621
119 Ga0501037_0012265 3300049573 Bacteria 6307
120 Ga0501043_0022223 3300049579 Bacteria 4976
121 Ga0501047_0001282 3300049581 Bacteria 24835
122 Ga0501083_0000011 3300049744 Bacteria 181041
123 Ga0501035_0145295 3300049822 Bacteria 2060
124 Ga0501044_0043046 3300049823 Bacteria 4692
125 nmdc:mga03n38_463396_c1 3300050490 Bacteria 706
126 nmdc:mga03n38_93825_c1 3300050490 Bacteria 1434
127 nmdc:mga0yw44_9114_c1 3300050492 Bacteria 4994
128 nmdc:mga06z11_199780_c1 3300050494 Bacteria 1161
129 nmdc:mga0sz30_181771_c1 3300050516 Bacteria 933
130 Ga0495619_0268237 3300053085 Bacteria 1183
131 Ga0500559_0065637 3300053136 Bacteria 1626
132 Ga0500573_0000007 3300053140 Bacteria 272970
133 Ga0500573_0130262 3300053140 Bacteria 1394
134 2588107429 2585428157 Bacteria 3018951
135 2643847677 2643221566 Bacteria 3460379
136 2643876627 2643221572 Bacteria 3614809
137 2643888000 2643221575 Bacteria 4022601
138 2643994698 2643221597 Bacteria 3347721
139 2644383682 2643221669 Bacteria 3611286
140 2760624660 2758568621 Bacteria 5967089
141 2774381105 2773857758 Bacteria 3592392
142 2774382253 2773857759 Bacteria 2963774
143 2808628876 2808606306 Bacteria 3608896
144 2821268895 2821268502 Bacteria 3750023
145 2833709768 2833709550 Bacteria 4008291
146 2884994506 2884994152 Bacteria 4492978
147 2904511014 2904509784 Bacteria 3520416
148 2908680240 2908678064 Bacteria 3482747
149 2919072800 2919069694 Bacteria 3622919
150 2919399338 2919395869 Bacteria 3704152
151 2928092559 2928090899 Bacteria 3158267
152 2935411821 2935409751 Bacteria 4179611
153 2974296343 2974294766 Bacteria 3767688
154 2974327424 2974324384 Bacteria 3750535
155 2977229059 2977228692 Bacteria 3450105
156 2977238908 2977236895 Bacteria 3569373
157 2977252436 2977251589 Bacteria 2952848
158 2977267716 2977264416 Bacteria 3750737
159 2984543308 2984542743 Bacteria 3569378
160 2984583906 2984580707 Bacteria 3351387
161 8016256559 8016254467 Bacteria 3797036
162 8056583087 8056579771 Bacteria 5840325
163 Ga0501034_0021358
164 LJQas_1010680
165 rootL2_10096970
166 Ga0065714_10076671
167 Ga0070658_10000162
168 Ga0070658_10550767
169 Ga0070658_10570636
170 Ga0070682_100242693
171 Ga0070659_100032331
172 Ga0070663_100088165
173 Ga0068853_100454596
174 Ga0068855_100071290
175 Ga0068855_100130751
176 Ga0075365_10058463
177 Ga0075365_10277413
178 Ga0075363_100125071
179 Ga0075364_10056554
180 Ga0075367_10005384
181 Ga0075369_10003630
182 Ga0075370_10008130
183 Ga0105244_10051452
184 Ga0105244_10051454
185 Ga0105243_10026650
186 Ga0105243_10192159
187 Ga0105246_10058182
188 Ga0157370_10042429
189 Ga0157370_10092286
190 Ga0157369_10894475
191 Ga0157375_10570745
192 Ga0157375_11653905
193 Ga0163163_10848676
194 Ga0157380_10014289
195 Ga0157380_10207375
196 Ga0197907_10916476
197 Ga0206356_10247841
198 Ga0206355_1568077
199 Ga0206354_11448225
200 Ga0206353_10446287
201 Ga0207655_1003481
202 Ga0207655_1020426
203 Ga0207643_10053316
204 Ga0207705_10000001
205 Ga0207705_10297226
206 Ga0207681_10358648
207 Ga0207690_10021035
208 Ga0207667_10143229
209 Ga0207667_10221851
210 Ga0207668_10043461
211 Ga0207678_10025024
212 Ga0207678_10555503
213 Ga0207675_100487389
214 Ga0395901_0143128
215 Ga0451791_1071581
216 Ga0451793_1295899
217 Ga0451797_1101593
218 Ga0451837_0479497
219 Ga0451839_1455646
220 Ga0451841_0346238
221 Ga0451843_0240887
222 Ga0466965_0012974
223 Ga0453684_0160031
224 Ga0495629_0128073
225 Ga0495653_0002119
226 Ga0495582_0020952
227 Ga0495582_0312271
228 Ga0495662_0006596
229 Ga0495664_0005552
230 Ga0495594_0144654
231 Ga0495665_0000504
232 Ga0495586_0028447
233 Ga0495587_0001568
234 Ga0495645_0007284
235 Ga0495667_0003032
236 Ga0495634_0150207
237 Ga0495657_0044311
238 Ga0495623_0081900
239 Ga0495600_0003410
240 Ga0495581_0028398
241 Ga0495581_0084862
242 Ga0495680_0213017
243 Ga0495675_0097286
244 Ga0496101_1051831
245 Ga0496104_0102171
246 Ga0496105_0012940
247 Ga0496105_0349905
248 Ga0496108_0137026
249 Ga0496109_0136011
250 Ga0496110_0168601
251 Ga0496111_0161682
252 Ga0496112_0414074
253 Ga0496113_0074215
254 Ga0496113_0284624
255 Ga0496114_0041269
256 Ga0496114_0080231
257 Ga0496114_0139290
258 Ga0496114_0321729
259 Ga0496115_0198993
260 Ga0496116_0010156
261 Ga0496118_0032555
262 Ga0496118_0072562
263 Ga0496118_0086331
264 Ga0496119_0011902
265 Ga0496119_0065292
266 Ga0496120_0001498
267 Ga0496120_0157557
268 Ga0496121_0000025
269 Ga0496121_0371744
270 Ga0496122_0000071
271 Ga0496122_0003842
272 Ga0496122_0005844
273 Ga0496122_0373307
274 Ga0496123_0000006
275 Ga0496124_0047668
276 Ga0496125_0000047
277 Ga0496126_0019044
278 Ga0501032_0081358
279 Ga0501034_0011821
280 Ga0501034_0119596
281 Ga0501037_0012265
282 Ga0501043_0022223
283 Ga0501047_0001282
284 Ga0501083_0000011
285 Ga0501035_0145295
286 Ga0501044_0043046
287 nmdc:mga03n38_463396_c1
288 nmdc:mga03n38_93825_c1
289 nmdc:mga0yw44_9114_c1
290 nmdc:mga06z11_199780_c1
291 nmdc:mga0sz30_181771_c1
292 Ga0495619_0268237
293 Ga0500559_0065637
294 Ga0500573_0000007
295 Ga0500573_0130262
296 2588107429
297 2643847677
298 2643876627
299 2643888000
300 2643994698
301 2644383682
302 2760624660
303 2774381105
304 2774382253
305 2808628876
306 2821268895
307 2833709768
308 2884994506
309 2904511014
310 2908680240
311 2919072800
312 2919399338
313 2928092559
314 2935411821
315 2974296343
316 2974327424
317 2977229059
318 2977238908
319 2977252436
320 2977267716
321 2984543308
322 2984583906
323 8016256559
324 8056583087

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

8

85

0.86

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

1

66

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fox-assembly2.cif.gz_B the crystal structure of p.fluorescens kynurenine 3-monooxygenase (kmo) in complex with kynurenine 0.9934 3 31
4bk1-assembly1.cif.gz_A-2 crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: h213s mutant in complex with 3-hydroxybenzoate 0.9919 2 31
4bk3-assembly1.cif.gz_A-2 crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: y105f mutant 0.9916 2 31
6pvj-assembly1.cif.gz_A crystal structure of phqk in complex with malbrancheamide c 0.99 2 31
6fph-assembly2.cif.gz_B the crystal structure of p.fluorescens kynurenine 3-monooxygenase (kmo) in complex with competitive inhibitor no. 1h 0.9897 3 31
ID Description Score Start End Superfamily
af_P49086_94_556_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9758 2 32 3.50.50.60
4k7zA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9738 2 30 3.50.50.60
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9723 2 32 3.50.50.60
af_Q8VYV2_23_370_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9694 6 30 3.50.50.60
af_A0A1D6E3F3_39_301_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.965 2 30 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A1H2BPT8-F1-model_v4 Pyrroline-5-carboxylate reductase catalytic N-terminal domain-containing protein 1.002 1 213
AF-A0A3N0BY28-F1-model_v4 NADP oxidoreductase 1.001 1 213
AF-A0A0K8Q7F2-F1-model_v4 NADP oxidoreductase, coenzyme F420-dependent 1.001 66 213
AF-A0A0A1CS19-F1-model_v4 Coenzyme F420-dependent NADP oxidoreductase 0.9999 1 213
AF-A0A4Y6R6B4-F1-model_v4 NADP oxidoreductase 0.9998 1 213

Map