F239844
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 162 | 114 | 324 | 340 |
Family's Representative Sequence
| Representative Sequence | 3300039450|Ga0436363_0422030|Ga0436363_0422030_1017_2138 |
| Length | 373 |
| Sequence | MTDGDGTLHRVGIVEHGGRPAAVKAAEEVRRWCDDHCVSWADIDVWDDDAPRRSAHEEAERAGHLDLVVTLGGDGTFLRGARIALAADIPVLGIDVGRVGFLTEVGIGEVETALEAVHHGGARIEERLALTMRASRPLELPRDMESLLRYGRGPMLPPPRLRPGLPEDVGWGVPLEISAVNDVVFEKLARDRQASLGVYLGDRLFASYSADAIIVGSPTGSTAYSFSAGGPVLSPRVEGIVVTPVAPHMIFNRSLVLAADEIVSVRVLDRSGQVAVSVDGQLRGVLDPGDWVAVYAAARRAKLVRLHRSDFYGRLRDRFALADAPAAAADTGGAPLRYHPMAPPPEDLRQLHISDDGGEGESDDEGQATAESP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 13 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 14 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 15 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 16 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 17 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 18 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 19 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 27 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 28 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 29 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 40 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 42 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 43 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 44 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 45 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 46 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 47 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 48 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 49 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 50 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 51 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 52 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 53 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 54 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 55 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 70 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 71 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 72 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 73 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 74 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 75 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 76 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 77 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 78 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 79 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 80 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 81 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 82 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 83 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 84 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 85 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 86 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 88 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 89 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 91 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 92 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 93 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 94 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 95 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 96 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 97 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 98 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 99 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 100 | 2582581312 | Streptomyces atratus OK008 | Isolate | Rhizosphere |
| 101 | 2731639228 | Motilibacter peucedani DSM 45328 | Isolate | Rhizosphere |
| 102 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 103 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 104 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 105 | 2862281513 | Streptomyces sp. Act143 | Isolate | Rhizosphere |
| 106 | 2995463766 | Streptacidiphilus fuscans NEAU-YB345 | Isolate | Unclassified |
| 107 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 108 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 109 | 8025530807 | Streptomyces sp. 4R-3d | Isolate | Unclassified |
| 110 | 8047893842 | Streptomyces cangkringensis DSM 41769 | Isolate | Rhizosphere |
| 111 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 112 | 8048356638 | Streptomyces rhizosphaericus DSM 41760 | Isolate | Rhizosphere |
| 113 | 8048369669 | Streptomyces indonesiensis DSM 41759 | Isolate | Rhizoplane |
| 114 | 8048379754 | Streptomyces asiaticus DSM 41761 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.12 |
| Metatranscriptomes | 0.62 |
| Isolates | 9.26 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.23 |
| Nodule | 0 |
| Rhizoplane | 5.56 |
| Rhizosphere | 86.42 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.62 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0436363_0422030 | 3300039450 | Bacteria | 2189 |
| 2 | Ga0070658_10000208 | 3300005327 | Bacteria | 51844 |
| 3 | Ga0070658_10194405 | 3300005327 | Bacteria | 1711 |
| 4 | Ga0070683_100193825 | 3300005329 | Bacteria | 1929 |
| 5 | Ga0070680_100000787 | 3300005336 | Bacteria | 22284 |
| 6 | Ga0070700_100000010 | 3300005441 | Bacteria | 176885 |
| 7 | Ga0070681_10000950 | 3300005458 | Bacteria | 24403 |
| 8 | Ga0070681_10054828 | 3300005458 | Bacteria | 3972 |
| 9 | Ga0070698_100013457 | 3300005471 | Bacteria | 8660 |
| 10 | Ga0070699_100039729 | 3300005518 | Bacteria | 4074 |
| 11 | Ga0070679_100001246 | 3300005530 | Bacteria | 22424 |
| 12 | Ga0070679_100112796 | 3300005530 | Bacteria | 2704 |
| 13 | Ga0070684_100131495 | 3300005535 | Bacteria | 2258 |
| 14 | Ga0070665_100012991 | 3300005548 | Bacteria | 8388 |
| 15 | Ga0070665_100141605 | 3300005548 | Bacteria | 2408 |
| 16 | Ga0068857_100035933 | 3300005577 | Bacteria | 4389 |
| 17 | Ga0068857_100267296 | 3300005577 | Bacteria | 1571 |
| 18 | Ga0068863_100027251 | 3300005841 | Bacteria | 5449 |
| 19 | Ga0081455_10002336 | 3300005937 | Bacteria | 22640 |
| 20 | Ga0081455_10037126 | 3300005937 | Bacteria | 4331 |
| 21 | Ga0081455_10070257 | 3300005937 | Bacteria | 2908 |
| 22 | Ga0081540_1003866 | 3300005983 | Bacteria | 11691 |
| 23 | Ga0081540_1004210 | 3300005983 | Bacteria | 11055 |
| 24 | Ga0075428_100066768 | 3300006844 | Bacteria | 3938 |
| 25 | Ga0075428_100372494 | 3300006844 | Bacteria | 1531 |
| 26 | Ga0075430_100009942 | 3300006846 | Bacteria | 8046 |
| 27 | Ga0075430_100050361 | 3300006846 | Bacteria | 3513 |
| 28 | Ga0075429_100047925 | 3300006880 | Bacteria | 3716 |
| 29 | Ga0111539_10091862 | 3300009094 | Bacteria | 3567 |
| 30 | Ga0114129_10305247 | 3300009147 | Bacteria | 2120 |
| 31 | Ga0105248_10343233 | 3300009177 | Bacteria | 1681 |
| 32 | Ga0157370_10117912 | 3300013104 | Bacteria | 2480 |
| 33 | Ga0157369_10028576 | 3300013105 | Bacteria | 6171 |
| 34 | Ga0157369_10054040 | 3300013105 | Bacteria | 4337 |
| 35 | Ga0163162_10385019 | 3300013306 | Bacteria | 1536 |
| 36 | Ga0163163_10087680 | 3300014325 | Bacteria | 3123 |
| 37 | Ga0163163_10533312 | 3300014325 | Bacteria | 1236 |
| 38 | Ga0206353_10050928 | 3300020082 | Bacteria | 4138 |
| 39 | Ga0209758_1003205 | 3300025297 | Bacteria | 15269 |
| 40 | Ga0207426_1027082 | 3300025302 | Bacteria | 1914 |
| 41 | Ga0207705_10154373 | 3300025909 | Bacteria | 1722 |
| 42 | Ga0207707_10000701 | 3300025912 | Bacteria | 33282 |
| 43 | Ga0207707_10066859 | 3300025912 | Bacteria | 3130 |
| 44 | Ga0207660_10000440 | 3300025917 | Bacteria | 27472 |
| 45 | Ga0207660_10010331 | 3300025917 | Bacteria | 6055 |
| 46 | Ga0207652_10001162 | 3300025921 | Bacteria | 23633 |
| 47 | Ga0207700_10113650 | 3300025928 | Bacteria | 2183 |
| 48 | Ga0207661_10051289 | 3300025944 | Bacteria | 3291 |
| 49 | Ga0207708_10000006 | 3300026075 | Bacteria | 266916 |
| 50 | Ga0207702_10047960 | 3300026078 | Bacteria | 3601 |
| 51 | Ga0207641_10211882 | 3300026088 | Bacteria | 1792 |
| 52 | Ga0207674_10053646 | 3300026116 | Bacteria | 4108 |
| 53 | Ga0207674_10280312 | 3300026116 | Bacteria | 1615 |
| 54 | Ga0207428_10024786 | 3300027907 | Bacteria | 5035 |
| 55 | Ga0268266_10011894 | 3300028379 | Bacteria | 7539 |
| 56 | Ga0268266_10103118 | 3300028379 | Bacteria | 2517 |
| 57 | Ga0307513_10144438 | 3300031456 | Bacteria | 2300 |
| 58 | Ga0307508_10019879 | 3300031616 | Bacteria | 6102 |
| 59 | Ga0373956_0040686 | 3300035119 | Bacteria | 2062 |
| 60 | Ga0395898_0128915 | 3300037466 | Bacteria | 2423 |
| 61 | Ga0436364_0145839 | 3300037853 | Bacteria | 3598 |
| 62 | Ga0395901_0003710 | 3300038443 | Bacteria | 15397 |
| 63 | Ga0395901_0097761 | 3300038443 | Bacteria | 3078 |
| 64 | Ga0395901_0280201 | 3300038443 | Bacteria | 1732 |
| 65 | Ga0466963_0006814 | 3300044694 | Bacteria | 6796 |
| 66 | Ga0466963_0006875 | 3300044694 | Bacteria | 6767 |
| 67 | Ga0466963_0021177 | 3300044694 | Bacteria | 4098 |
| 68 | Ga0466963_0271763 | 3300044694 | Bacteria | 1191 |
| 69 | Ga0466964_0202320 | 3300044706 | Bacteria | 954 |
| 70 | Ga0466971_0077786 | 3300044719 | Bacteria | 1511 |
| 71 | Ga0466970_0144340 | 3300044765 | Bacteria | 1312 |
| 72 | Ga0466957_0010322 | 3300044842 | Bacteria | 5356 |
| 73 | Ga0466957_0084953 | 3300044842 | Bacteria | 1976 |
| 74 | Ga0466960_0012426 | 3300044901 | Bacteria | 3593 |
| 75 | Ga0466960_0047119 | 3300044901 | Bacteria | 2066 |
| 76 | Ga0466960_0058746 | 3300044901 | Bacteria | 1879 |
| 77 | Ga0466960_0095261 | 3300044901 | Bacteria | 1524 |
| 78 | Ga0466958_0037225 | 3300045836 | Unclassified | 2915 |
| 79 | Ga0466967_0010231 | 3300045976 | Bacteria | 7020 |
| 80 | Ga0466967_0028229 | 3300045976 | Bacteria | 4682 |
| 81 | Ga0466967_0135305 | 3300045976 | Bacteria | 2291 |
| 82 | Ga0466967_0169826 | 3300045976 | Bacteria | 2051 |
| 83 | Ga0466967_0385437 | 3300045976 | Bacteria | 1361 |
| 84 | Ga0466967_0428480 | 3300045976 | Bacteria | 1290 |
| 85 | Ga0495603_0002591 | 3300046455 | Bacteria | 10671 |
| 86 | Ga0495603_0012024 | 3300046455 | Bacteria | 5239 |
| 87 | Ga0495629_0005212 | 3300046459 | Bacteria | 9733 |
| 88 | Ga0495629_0006987 | 3300046459 | Bacteria | 8319 |
| 89 | Ga0495585_0014883 | 3300046492 | Bacteria | 4525 |
| 90 | Ga0495594_0007539 | 3300046499 | Bacteria | 5600 |
| 91 | Ga0495594_0011190 | 3300046499 | Bacteria | 4659 |
| 92 | Ga0495588_0018054 | 3300046674 | Bacteria | 3435 |
| 93 | Ga0495646_0143435 | 3300046680 | Bacteria | 1334 |
| 94 | Ga0495658_0007815 | 3300046683 | Bacteria | 5295 |
| 95 | Ga0495658_0140343 | 3300046683 | Bacteria | 1477 |
| 96 | Ga0495613_0005531 | 3300046689 | Bacteria | 9485 |
| 97 | Ga0495624_0067047 | 3300046690 | Bacteria | 2240 |
| 98 | Ga0495589_0083406 | 3300046794 | Bacteria | 1554 |
| 99 | Ga0495589_0146742 | 3300046794 | Bacteria | 1128 |
| 100 | Ga0495676_0000607 | 3300047321 | Bacteria | 29631 |
| 101 | Ga0495676_0077268 | 3300047321 | Bacteria | 2539 |
| 102 | Ga0495680_0279473 | 3300047322 | Bacteria | 1177 |
| 103 | Ga0495683_0114359 | 3300047323 | Bacteria | 1286 |
| 104 | Ga0495614_0006986 | 3300048089 | Bacteria | 5040 |
| 105 | Ga0496106_0005286 | 3300048909 | Bacteria | 9568 |
| 106 | Ga0496106_0008327 | 3300048909 | Bacteria | 7675 |
| 107 | Ga0496108_0183767 | 3300048911 | Bacteria | 1811 |
| 108 | Ga0496110_0035541 | 3300048913 | Bacteria | 4323 |
| 109 | Ga0496112_0097009 | 3300048915 | Bacteria | 2918 |
| 110 | Ga0496112_0138899 | 3300048915 | Bacteria | 2399 |
| 111 | Ga0496115_0052419 | 3300048918 | Bacteria | 3273 |
| 112 | Ga0496115_0179472 | 3300048918 | Bacteria | 1751 |
| 113 | Ga0496126_0131556 | 3300048929 | Bacteria | 2162 |
| 114 | Ga0496126_0271435 | 3300048929 | Bacteria | 1407 |
| 115 | Ga0501032_0043594 | 3300049569 | Bacteria | 3037 |
| 116 | Ga0501033_0025289 | 3300049570 | Bacteria | 4472 |
| 117 | Ga0501036_0203193 | 3300049572 | Bacteria | 1666 |
| 118 | Ga0501038_0000113 | 3300049574 | Bacteria | 68151 |
| 119 | Ga0501038_0003526 | 3300049574 | Bacteria | 14571 |
| 120 | Ga0501038_0056920 | 3300049574 | Bacteria | 3358 |
| 121 | Ga0501040_0061157 | 3300049576 | Bacteria | 2589 |
| 122 | Ga0501046_0064266 | 3300049580 | Bacteria | 2865 |
| 123 | Ga0501047_0224789 | 3300049581 | Bacteria | 1732 |
| 124 | Ga0501047_0235656 | 3300049581 | Bacteria | 1682 |
| 125 | Ga0501048_0024261 | 3300049582 | Bacteria | 4427 |
| 126 | Ga0501070_0027059 | 3300049586 | Bacteria | 4811 |
| 127 | Ga0501070_0071841 | 3300049586 | Bacteria | 2865 |
| 128 | Ga0501071_0159684 | 3300049587 | Bacteria | 1684 |
| 129 | Ga0501072_0022051 | 3300049588 | Bacteria | 4941 |
| 130 | Ga0501074_0000841 | 3300049590 | Bacteria | 19542 |
| 131 | Ga0501075_0067052 | 3300049591 | Bacteria | 2709 |
| 132 | Ga0501079_0171890 | 3300049741 | Bacteria | 1690 |
| 133 | Ga0501080_0094850 | 3300049742 | Bacteria | 2771 |
| 134 | Ga0501035_0006164 | 3300049822 | Bacteria | 11286 |
| 135 | Ga0501035_0029572 | 3300049822 | Bacteria | 4997 |
| 136 | Ga0501044_0012546 | 3300049823 | Bacteria | 9179 |
| 137 | Ga0501044_0058323 | 3300049823 | Bacteria | 3959 |
| 138 | Ga0501044_0149483 | 3300049823 | Bacteria | 2319 |
| 139 | Ga0501044_0271483 | 3300049823 | Bacteria | 1631 |
| 140 | Ga0501045_0013996 | 3300049824 | Bacteria | 5678 |
| 141 | nmdc:mga05p37_136087_c1 | 3300050507 | Bacteria | 3013 |
| 142 | nmdc:mga09592_37454_c1 | 3300050508 | Bacteria | 4069 |
| 143 | nmdc:mga0qj67_52961_c1 | 3300050509 | Bacteria | 3212 |
| 144 | nmdc:mga06r32_34343_c1 | 3300050510 | Bacteria | 4782 |
| 145 | nmdc:mga0n895_251865_c1 | 3300050512 | Bacteria | 1792 |
| 146 | Ga0501084_0006441 | 3300054114 | Bacteria | 9649 |
| 147 | Ga0501082_0044286 | 3300060353 | Bacteria | 3838 |
| 148 | 2585298975 | 2582581312 | Bacteria | 7308206 |
| 149 | 2731907589 | 2731639228 | Bacteria | 4187555 |
| 150 | 2793975585 | 2791355406 | Bacteria | 11364898 |
| 151 | 2795785543 | 2795385470 | Bacteria | 8317180 |
| 152 | 2816423854 | 2816332119 | Bacteria | 8120218 |
| 153 | 2862281648 | 2862281513 | Bacteria | 9621493 |
| 154 | 2995470456 | 2995463766 | Bacteria | 8577691 |
| 155 | 2996226488 | 2996221748 | Bacteria | 6799777 |
| 156 | 2997607354 | 2997600082 | Bacteria | 9896405 |
| 157 | 8025533474 | 8025530807 | Bacteria | 8495698 |
| 158 | 8047901851 | 8047893842 | Bacteria | 11723082 |
| 159 | 8048130874 | 8048127548 | Bacteria | 11053136 |
| 160 | 8048357039 | 8048356638 | Bacteria | 11044339 |
| 161 | 8048378787 | 8048369669 | Bacteria | 11666822 |
| 162 | 8048387889 | 8048379754 | Bacteria | 11877923 |
| 163 | Ga0436363_0422030 | |||
| 164 | Ga0070658_10000208 | |||
| 165 | Ga0070658_10194405 | |||
| 166 | Ga0070683_100193825 | |||
| 167 | Ga0070680_100000787 | |||
| 168 | Ga0070700_100000010 | |||
| 169 | Ga0070681_10000950 | |||
| 170 | Ga0070681_10054828 | |||
| 171 | Ga0070698_100013457 | |||
| 172 | Ga0070699_100039729 | |||
| 173 | Ga0070679_100001246 | |||
| 174 | Ga0070679_100112796 | |||
| 175 | Ga0070684_100131495 | |||
| 176 | Ga0070665_100012991 | |||
| 177 | Ga0070665_100141605 | |||
| 178 | Ga0068857_100035933 | |||
| 179 | Ga0068857_100267296 | |||
| 180 | Ga0068863_100027251 | |||
| 181 | Ga0081455_10002336 | |||
| 182 | Ga0081455_10037126 | |||
| 183 | Ga0081455_10070257 | |||
| 184 | Ga0081540_1003866 | |||
| 185 | Ga0081540_1004210 | |||
| 186 | Ga0075428_100066768 | |||
| 187 | Ga0075428_100372494 | |||
| 188 | Ga0075430_100009942 | |||
| 189 | Ga0075430_100050361 | |||
| 190 | Ga0075429_100047925 | |||
| 191 | Ga0111539_10091862 | |||
| 192 | Ga0114129_10305247 | |||
| 193 | Ga0105248_10343233 | |||
| 194 | Ga0157370_10117912 | |||
| 195 | Ga0157369_10028576 | |||
| 196 | Ga0157369_10054040 | |||
| 197 | Ga0163162_10385019 | |||
| 198 | Ga0163163_10087680 | |||
| 199 | Ga0163163_10533312 | |||
| 200 | Ga0206353_10050928 | |||
| 201 | Ga0209758_1003205 | |||
| 202 | Ga0207426_1027082 | |||
| 203 | Ga0207705_10154373 | |||
| 204 | Ga0207707_10000701 | |||
| 205 | Ga0207707_10066859 | |||
| 206 | Ga0207660_10000440 | |||
| 207 | Ga0207660_10010331 | |||
| 208 | Ga0207652_10001162 | |||
| 209 | Ga0207700_10113650 | |||
| 210 | Ga0207661_10051289 | |||
| 211 | Ga0207708_10000006 | |||
| 212 | Ga0207702_10047960 | |||
| 213 | Ga0207641_10211882 | |||
| 214 | Ga0207674_10053646 | |||
| 215 | Ga0207674_10280312 | |||
| 216 | Ga0207428_10024786 | |||
| 217 | Ga0268266_10011894 | |||
| 218 | Ga0268266_10103118 | |||
| 219 | Ga0307513_10144438 | |||
| 220 | Ga0307508_10019879 | |||
| 221 | Ga0373956_0040686 | |||
| 222 | Ga0395898_0128915 | |||
| 223 | Ga0436364_0145839 | |||
| 224 | Ga0395901_0003710 | |||
| 225 | Ga0395901_0097761 | |||
| 226 | Ga0395901_0280201 | |||
| 227 | Ga0466963_0006814 | |||
| 228 | Ga0466963_0006875 | |||
| 229 | Ga0466963_0021177 | |||
| 230 | Ga0466963_0271763 | |||
| 231 | Ga0466964_0202320 | |||
| 232 | Ga0466971_0077786 | |||
| 233 | Ga0466970_0144340 | |||
| 234 | Ga0466957_0010322 | |||
| 235 | Ga0466957_0084953 | |||
| 236 | Ga0466960_0012426 | |||
| 237 | Ga0466960_0047119 | |||
| 238 | Ga0466960_0058746 | |||
| 239 | Ga0466960_0095261 | |||
| 240 | Ga0466958_0037225 | |||
| 241 | Ga0466967_0010231 | |||
| 242 | Ga0466967_0028229 | |||
| 243 | Ga0466967_0135305 | |||
| 244 | Ga0466967_0169826 | |||
| 245 | Ga0466967_0385437 | |||
| 246 | Ga0466967_0428480 | |||
| 247 | Ga0495603_0002591 | |||
| 248 | Ga0495603_0012024 | |||
| 249 | Ga0495629_0005212 | |||
| 250 | Ga0495629_0006987 | |||
| 251 | Ga0495585_0014883 | |||
| 252 | Ga0495594_0007539 | |||
| 253 | Ga0495594_0011190 | |||
| 254 | Ga0495588_0018054 | |||
| 255 | Ga0495646_0143435 | |||
| 256 | Ga0495658_0007815 | |||
| 257 | Ga0495658_0140343 | |||
| 258 | Ga0495613_0005531 | |||
| 259 | Ga0495624_0067047 | |||
| 260 | Ga0495589_0083406 | |||
| 261 | Ga0495589_0146742 | |||
| 262 | Ga0495676_0000607 | |||
| 263 | Ga0495676_0077268 | |||
| 264 | Ga0495680_0279473 | |||
| 265 | Ga0495683_0114359 | |||
| 266 | Ga0495614_0006986 | |||
| 267 | Ga0496106_0005286 | |||
| 268 | Ga0496106_0008327 | |||
| 269 | Ga0496108_0183767 | |||
| 270 | Ga0496110_0035541 | |||
| 271 | Ga0496112_0097009 | |||
| 272 | Ga0496112_0138899 | |||
| 273 | Ga0496115_0052419 | |||
| 274 | Ga0496115_0179472 | |||
| 275 | Ga0496126_0131556 | |||
| 276 | Ga0496126_0271435 | |||
| 277 | Ga0501032_0043594 | |||
| 278 | Ga0501033_0025289 | |||
| 279 | Ga0501036_0203193 | |||
| 280 | Ga0501038_0000113 | |||
| 281 | Ga0501038_0003526 | |||
| 282 | Ga0501038_0056920 | |||
| 283 | Ga0501040_0061157 | |||
| 284 | Ga0501046_0064266 | |||
| 285 | Ga0501047_0224789 | |||
| 286 | Ga0501047_0235656 | |||
| 287 | Ga0501048_0024261 | |||
| 288 | Ga0501070_0027059 | |||
| 289 | Ga0501070_0071841 | |||
| 290 | Ga0501071_0159684 | |||
| 291 | Ga0501072_0022051 | |||
| 292 | Ga0501074_0000841 | |||
| 293 | Ga0501075_0067052 | |||
| 294 | Ga0501079_0171890 | |||
| 295 | Ga0501080_0094850 | |||
| 296 | Ga0501035_0006164 | |||
| 297 | Ga0501035_0029572 | |||
| 298 | Ga0501044_0012546 | |||
| 299 | Ga0501044_0058323 | |||
| 300 | Ga0501044_0149483 | |||
| 301 | Ga0501044_0271483 | |||
| 302 | Ga0501045_0013996 | |||
| 303 | nmdc:mga05p37_136087_c1 | |||
| 304 | nmdc:mga09592_37454_c1 | |||
| 305 | nmdc:mga0qj67_52961_c1 | |||
| 306 | nmdc:mga06r32_34343_c1 | |||
| 307 | nmdc:mga0n895_251865_c1 | |||
| 308 | Ga0501084_0006441 | |||
| 309 | Ga0501082_0044286 | |||
| 310 | 2585298975 | |||
| 311 | 2731907589 | |||
| 312 | 2793975585 | |||
| 313 | 2795785543 | |||
| 314 | 2816423854 | |||
| 315 | 2862281648 | |||
| 316 | 2995470456 | |||
| 317 | 2996226488 | |||
| 318 | 2997607354 | |||
| 319 | 8025533474 | |||
| 320 | 8047901851 | |||
| 321 | 8048130874 | |||
| 322 | 8048357039 | |||
| 323 | 8048378787 | |||
| 324 | 8048387889 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1y3i-assembly1.cif.gz_B | crystal structure of mycobacterium tuberculosis nad kinase-nad complex | 0.919 | 63 | 318 |
| 1y3h-assembly1.cif.gz_A-2 | crystal structure of inorganic polyphosphate/atp-nad kinase from mycobacterium tuberculosis | 0.9125 | 3 | 318 |
| 5eji-assembly1.cif.gz_A | crystal structure of nad kinase w78f mutant from listeria monocytogenes in complex with nadp/mn++/ppi | 0.8936 | 5 | 316 |
| 6rc1-assembly1.cif.gz_A | crystal structure of nad kinase 1 from listeria monocytogenes in complexe with an adenine derivative | 0.8929 | 5 | 318 |
| 6rga-assembly1.cif.gz_A | crystal structure of nad kinase 1 from listeria monocytogenes in complexe with an inhibitor | 0.8913 | 5 | 316 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WHV7_157_273_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9702 | 175 | 290 | 3.40.50.720 |
| af_P9WHV7_157_273_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9461 | 175 | 290 | 3.40.50.720 |
| af_Q06892_224_346_3.40.50.10330 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.9278 | 175 | 290 | 3.40.50.10330 |
| 3pfnD02 | Mainly Beta;Sandwich;Tumour Suppressor Smad4;Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.926 | 175 | 292 | 2.60.200.30 |
| 2an1A02 | Mainly Beta;Sandwich;Tumour Suppressor Smad4;Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.9204 | 175 | 292 | 2.60.200.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6J6IDU0-F1-model_v4 | Unannotated protein | 0.959 | 181 | 321 |
GO:0003951
GO:0006741 GO:0019674 |
| AF-A0A382Z9Q0-F1-model_v4 | NAD(+) kinase | 0.9535 | 179 | 317 |
GO:0003951
GO:0006741 GO:0019674 |
| AF-A0A3N4S1D3-F1-model_v4 | NAD kinase (EC 2.7.1.23) (ATP-dependent NAD kinase) | 0.9532 | 1 | 346 |
GO:0003951
GO:0005524 GO:0005737 GO:0006741 GO:0019674 GO:0046872 GO:0051287 |
| AF-A0A6J6CHF9-F1-model_v4 | Unannotated protein | 0.9523 | 173 | 321 |
GO:0003951
GO:0006741 GO:0019674 |
| AF-A0A534BYU4-F1-model_v4 | NAD(+) kinase | 0.948 | 181 | 317 |
GO:0003951
GO:0006741 GO:0019674 |