F239810
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 162 | 128 | 153 | 264 |
Family's Representative Sequence
| Representative Sequence | 3300037853|Ga0436364_0098097|Ga0436364_0098097_139_1083 |
| Length | 314 |
| Sequence | MRGNGAIDLLTAVLLSESVRIPNISAPLRTNAERKPEPVPKKSSPKSFANSPDFVVSLARGIEIIRAFTSADATASPALSNFRLADALTLSEVAARTGLARAVVRRFLYTLAQLGYVTTDGKYFRLTAKILDLGFAYLSSFSLPKIAERFLEEVTLQTKESSSASVLDGHEIVYVARIQTRRIMSISLGIGSRLPAFCTSMGRVLLAHLPADELERYLKHAEFTRFTERTICDAESLRKELATVSRQGFALVDQELELGLRSLAVPVFAGGGKVVAAINIGTQAARTPKNELSQRLLPVLRKAAKSISACLGHF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2511231221 | Azospirillum lipoferum 4B | Isolate | Rhizosphere |
| 2 | 2808606384 | Burkholderia sp. SJZ089 | Isolate | Rhizosphere |
| 3 | 2808606390 | Burkholderia sp. SJZ115 | Isolate | Rhizosphere |
| 4 | 2808606391 | Burkholderia sp. SJZ091 | Isolate | Rhizosphere |
| 5 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 6 | 2842747753 | Variovorax sp. R-72060 | Isolate | Unclassified |
| 7 | 2894023352 | Diaphorobacter ruginosibacter DSM 27467 | Isolate | Nodule |
| 8 | 2897803580 | Azospirillum doebereinerae GSF71 | Isolate | Unclassified |
| 9 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 10 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 11 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 12 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 13 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 22 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 23 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 26 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 27 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 36 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 37 | 3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Metagenome | Rhizosphere |
| 38 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300027614 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 47 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 48 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 49 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 50 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 51 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 52 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 53 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 54 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 55 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 56 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 57 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 58 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 59 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 60 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 61 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 62 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 63 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 91 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 92 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 93 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 94 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 95 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 96 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 97 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 98 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 99 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 120 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 121 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 122 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 123 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 124 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 125 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 126 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 128 | 8054002106 | Azospirillum lipoferum 59b | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.44 |
| Metatranscriptomes | 0 |
| Isolates | 5.56 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.02 |
| Nodule | 0.62 |
| Rhizoplane | 0.62 |
| Rhizosphere | 80.86 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.88 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10081945 | 3300003320 | Bacteria | 3262 |
| 2 | rootL2_10024918 | 3300003322 | Bacteria | 2135 |
| 3 | rootL2_10031145 | 3300003322 | Bacteria | 10438 |
| 4 | rootH1_10002723 | 3300003323 | Bacteria | 1219 |
| 5 | Ga0055529_1000403 | 3300003763 | Bacteria | 45873 |
| 6 | Ga0070658_10152042 | 3300005327 | Bacteria | 1938 |
| 7 | Ga0070683_100174916 | 3300005329 | Bacteria | 2038 |
| 8 | Ga0070683_100870185 | 3300005329 | Bacteria | 864 |
| 9 | Ga0070711_100049045 | 3300005439 | Bacteria | 2890 |
| 10 | Ga0070708_100033241 | 3300005445 | Bacteria | 4481 |
| 11 | Ga0070708_100404685 | 3300005445 | Bacteria | 1287 |
| 12 | Ga0070698_100026674 | 3300005471 | Bacteria | 6010 |
| 13 | Ga0070699_100095810 | 3300005518 | Bacteria | 2599 |
| 14 | Ga0070697_100039058 | 3300005536 | Bacteria | 3837 |
| 15 | Ga0070665_100604171 | 3300005548 | Bacteria | 1110 |
| 16 | Ga0068857_100285846 | 3300005577 | Bacteria | 1518 |
| 17 | Ga0075364_10000495 | 3300006051 | Bacteria | 20059 |
| 18 | Ga0070715_10062816 | 3300006163 | Bacteria | 1635 |
| 19 | Ga0070712_100058143 | 3300006175 | Bacteria | 2719 |
| 20 | Ga0075369_10082132 | 3300006186 | Bacteria | 1430 |
| 21 | Ga0075366_10106131 | 3300006195 | Bacteria | 1689 |
| 22 | Ga0105248_10016666 | 3300009177 | Bacteria | 8088 |
| 23 | Ga0105237_10036468 | 3300009545 | Bacteria | 4976 |
| 24 | Ga0105238_10008682 | 3300009551 | Bacteria | 10166 |
| 25 | Ga0105239_10411799 | 3300010375 | Bacteria | 1531 |
| 26 | Ga0163162_10219947 | 3300013306 | Bacteria | 2029 |
| 27 | Ga0157375_10751577 | 3300013308 | Bacteria | 1126 |
| 28 | Ga0163163_10201251 | 3300014325 | Bacteria | 2040 |
| 29 | Ga0163161_10143859 | 3300017792 | Bacteria | 1807 |
| 30 | Ga0213872_10001563 | 3300021361 | Bacteria | 14621 |
| 31 | Ga0213872_10004040 | 3300021361 | Bacteria | 7913 |
| 32 | Ga0213872_10032414 | 3300021361 | Bacteria | 2394 |
| 33 | Ga0213876_10000312 | 3300021384 | Bacteria | 42654 |
| 34 | Ga0213871_10024315 | 3300021441 | Unclassified | 1533 |
| 35 | Ga0209455_1000037 | 3300025272 | Bacteria | 464097 |
| 36 | Ga0207684_10124376 | 3300025910 | Bacteria | 2212 |
| 37 | Ga0207693_10056456 | 3300025915 | Bacteria | 3078 |
| 38 | Ga0207646_10001833 | 3300025922 | Bacteria | 25676 |
| 39 | Ga0207646_10279276 | 3300025922 | Bacteria | 1509 |
| 40 | Ga0207681_10010671 | 3300025923 | Bacteria | 5636 |
| 41 | Ga0207711_10234293 | 3300025941 | Bacteria | 1682 |
| 42 | Ga0207639_10576393 | 3300026041 | Unclassified | 1036 |
| 43 | Ga0209970_1002779 | 3300027614 | Bacteria | 2958 |
| 44 | Ga0265318_10121352 | 3300028577 | Unclassified | 961 |
| 45 | Ga0265325_10038125 | 3300031241 | Bacteria | 2538 |
| 46 | Ga0265339_10041692 | 3300031249 | Bacteria | 2546 |
| 47 | Ga0265316_10003477 | 3300031344 | Bacteria | 15920 |
| 48 | Ga0307413_10317358 | 3300031824 | Bacteria | 1189 |
| 49 | Ga0395899_0002152 | 3300037312 | Bacteria | 16175 |
| 50 | Ga0395900_0006722 | 3300037418 | Bacteria | 11937 |
| 51 | Ga0395898_0047216 | 3300037466 | Bacteria | 4226 |
| 52 | Ga0395905_0066655 | 3300037471 | Bacteria | 3372 |
| 53 | Ga0395905_0078513 | 3300037471 | Bacteria | 3093 |
| 54 | Ga0395905_0111250 | 3300037471 | Bacteria | 2572 |
| 55 | Ga0395905_0201693 | 3300037471 | Bacteria | 1865 |
| 56 | Ga0395905_0218478 | 3300037471 | Bacteria | 1784 |
| 57 | Ga0436364_0098097 | 3300037853 | Unclassified | 1151 |
| 58 | Ga0436364_0733282 | 3300037853 | Bacteria | 2113 |
| 59 | Ga0395901_0011310 | 3300038443 | Bacteria | 9042 |
| 60 | Ga0436360_0186662 | 3300039438 | Bacteria | 2119 |
| 61 | Ga0436360_0215114 | 3300039438 | Bacteria | 1760 |
| 62 | Ga0436360_0315767 | 3300039438 | Bacteria | 2629 |
| 63 | Ga0436360_0461738 | 3300039438 | Bacteria | 8157 |
| 64 | Ga0436360_0775859 | 3300039438 | Unclassified | 3183 |
| 65 | Ga0436361_0075558 | 3300039447 | Bacteria | 14163 |
| 66 | Ga0436361_0191513 | 3300039447 | Bacteria | 1488 |
| 67 | Ga0436361_0456229 | 3300039447 | Bacteria | 7114 |
| 68 | Ga0436361_0462538 | 3300039447 | Bacteria | 2898 |
| 69 | Ga0436361_0514817 | 3300039447 | Bacteria | 3518 |
| 70 | Ga0436361_0849281 | 3300039447 | Unclassified | 2051 |
| 71 | Ga0436363_1682693 | 3300039450 | Bacteria | 3899 |
| 72 | Ga0436362_0165644 | 3300039453 | Bacteria | 987 |
| 73 | Ga0436362_0752418 | 3300039453 | Bacteria | 3578 |
| 74 | Ga0436362_0845298 | 3300039453 | Bacteria | 1845 |
| 75 | Ga0436362_1120682 | 3300039453 | Bacteria | 1311 |
| 76 | Ga0466963_0005343 | 3300044694 | Bacteria | 7512 |
| 77 | Ga0453684_0622441 | 3300044712 | Bacteria | 1181 |
| 78 | Ga0495590_0001807 | 3300046457 | Bacteria | 9062 |
| 79 | Ga0495629_0186578 | 3300046459 | Bacteria | 1436 |
| 80 | Ga0495638_0067367 | 3300046460 | Bacteria | 2198 |
| 81 | Ga0495638_0094703 | 3300046460 | Bacteria | 1795 |
| 82 | Ga0495653_0013037 | 3300046463 | Bacteria | 6779 |
| 83 | Ga0495653_0049957 | 3300046463 | Bacteria | 3218 |
| 84 | Ga0495650_0043067 | 3300046471 | Bacteria | 1919 |
| 85 | Ga0495585_0001857 | 3300046492 | Bacteria | 15979 |
| 86 | Ga0495596_0042324 | 3300046500 | Bacteria | 1795 |
| 87 | Ga0495583_0007961 | 3300046506 | Bacteria | 6557 |
| 88 | Ga0495583_0033682 | 3300046506 | Bacteria | 2462 |
| 89 | Ga0495606_0000062 | 3300046507 | Bacteria | 184841 |
| 90 | Ga0495631_0114747 | 3300046518 | Bacteria | 1158 |
| 91 | Ga0495632_0055108 | 3300046519 | Bacteria | 1947 |
| 92 | Ga0495643_0000167 | 3300046522 | Bacteria | 104447 |
| 93 | Ga0495648_0022497 | 3300046524 | Bacteria | 4338 |
| 94 | Ga0495665_0133025 | 3300046531 | Bacteria | 1302 |
| 95 | Ga0495586_0066406 | 3300046535 | Bacteria | 1966 |
| 96 | Ga0495587_0078349 | 3300046536 | Bacteria | 1917 |
| 97 | Ga0495625_0212007 | 3300046660 | Bacteria | 1273 |
| 98 | Ga0495661_0006828 | 3300046665 | Bacteria | 7991 |
| 99 | Ga0495661_0099259 | 3300046665 | Bacteria | 1642 |
| 100 | Ga0495581_0218825 | 3300047315 | Bacteria | 1113 |
| 101 | Ga0495604_0083076 | 3300047317 | Bacteria | 2394 |
| 102 | Ga0495680_0008177 | 3300047322 | Bacteria | 9538 |
| 103 | Ga0495680_0013979 | 3300047322 | Bacteria | 6979 |
| 104 | Ga0495687_000012 | 3300047443 | Bacteria | 391586 |
| 105 | Ga0495675_0008485 | 3300047444 | Bacteria | 6368 |
| 106 | Ga0495675_0130896 | 3300047444 | Bacteria | 1559 |
| 107 | Ga0495677_0051923 | 3300047445 | Bacteria | 1510 |
| 108 | Ga0495685_041798 | 3300047447 | Bacteria | 1566 |
| 109 | Ga0495673_0000003 | 3300047469 | Bacteria | 1491337 |
| 110 | Ga0495593_0047773 | 3300047673 | Bacteria | 2275 |
| 111 | Ga0496115_0385692 | 3300048918 | Bacteria | 1139 |
| 112 | Ga0496122_0001600 | 3300048925 | Bacteria | 35421 |
| 113 | Ga0496122_0044758 | 3300048925 | Bacteria | 3450 |
| 114 | Ga0496123_0001311 | 3300048926 | Bacteria | 35270 |
| 115 | Ga0496124_0010750 | 3300048927 | Bacteria | 9227 |
| 116 | Ga0496125_0003280 | 3300048928 | Bacteria | 19885 |
| 117 | Ga0501033_0042661 | 3300049570 | Bacteria | 3381 |
| 118 | Ga0501036_0011134 | 3300049572 | Bacteria | 7441 |
| 119 | Ga0501037_0111158 | 3300049573 | Bacteria | 1974 |
| 120 | Ga0501038_0099831 | 3300049574 | Bacteria | 2419 |
| 121 | Ga0501039_0004385 | 3300049575 | Bacteria | 10640 |
| 122 | Ga0501040_0040322 | 3300049576 | Bacteria | 3177 |
| 123 | Ga0501046_0019155 | 3300049580 | Bacteria | 5677 |
| 124 | Ga0501047_0214331 | 3300049581 | Bacteria | 1783 |
| 125 | Ga0501048_0006431 | 3300049582 | Bacteria | 8929 |
| 126 | Ga0501067_0000249 | 3300049583 | Bacteria | 29614 |
| 127 | Ga0501068_0046442 | 3300049584 | Bacteria | 2619 |
| 128 | Ga0501070_0044231 | 3300049586 | Bacteria | 3706 |
| 129 | Ga0501071_0002275 | 3300049587 | Bacteria | 11566 |
| 130 | Ga0501071_0326397 | 3300049587 | Unclassified | 1166 |
| 131 | Ga0501072_0003422 | 3300049588 | Bacteria | 11950 |
| 132 | Ga0501073_0115695 | 3300049589 | Bacteria | 1859 |
| 133 | Ga0501074_0003279 | 3300049590 | Bacteria | 11440 |
| 134 | Ga0501075_0001717 | 3300049591 | Bacteria | 14389 |
| 135 | Ga0501076_0001399 | 3300049592 | Bacteria | 16158 |
| 136 | Ga0501077_0016044 | 3300049593 | Bacteria | 4718 |
| 137 | Ga0501079_0011503 | 3300049741 | Bacteria | 6754 |
| 138 | Ga0501081_0051170 | 3300049743 | Bacteria | 2848 |
| 139 | Ga0501035_0032503 | 3300049822 | Bacteria | 4746 |
| 140 | Ga0501044_0076598 | 3300049823 | Bacteria | 3394 |
| 141 | Ga0501044_0096167 | 3300049823 | Bacteria | 2984 |
| 142 | Ga0501045_0003995 | 3300049824 | Bacteria | 10156 |
| 143 | Ga0501045_0506477 | 3300049824 | Unclassified | 897 |
| 144 | nmdc:mga00v17_236614_c1 | 3300050491 | Bacteria | 1184 |
| 145 | nmdc:mga0k408_34744_c2 | 3300050493 | Bacteria | 2260 |
| 146 | nmdc:mga0sz30_78090_c1 | 3300050516 | Bacteria | 1430 |
| 147 | Ga0500608_104700 | 3300053122 | Bacteria | 1306 |
| 148 | Ga0500559_0007380 | 3300053136 | Bacteria | 4876 |
| 149 | Ga0500559_0143531 | 3300053136 | Bacteria | 1118 |
| 150 | Ga0500568_0000103 | 3300053139 | Bacteria | 78174 |
| 151 | Ga0500573_0140020 | 3300053140 | Bacteria | 1333 |
| 152 | Ga0501084_0005136 | 3300054114 | Bacteria | 10718 |
| 153 | Ga0530510_0129920 | 3300061734 | Bacteria | 1853 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300003322 | rootL2_10024918 | rootL2_100249182 | 228 |
| 2 | 3300003322 | rootL2_10031145 | rootL2_100311452 | 228 |
| 3 | 3300003323 | rootH1_10002723 | rootH1_100027232 | 228 |
| 4 | 3300003763 | Ga0055529_1000403 | Ga0055529_100040316 | 228 |
| 5 | 3300025272 | Ga0209455_1000037 | Ga0209455_1000037378 | 228 |
| 6 | 3300047469 | Ga0495673_0000003 | Ga0495673_0000003_1197995_1198795 | 229 |
| 7 | 3300046459 | Ga0495629_0186578 | Ga0495629_0186578_133_957 | 233 |
| 8 | 3300046463 | Ga0495653_0049957 | Ga0495653_0049957_62_886 | 233 |
| 9 | 3300046492 | Ga0495585_0001857 | Ga0495585_0001857_2949_3833 | 233 |
| 10 | 3300046506 | Ga0495583_0033682 | Ga0495583_0033682_566_1450 | 233 |
| 11 | 3300046524 | Ga0495648_0022497 | Ga0495648_0022497_2961_3782 | 233 |
| 12 | 3300046535 | Ga0495586_0066406 | Ga0495586_0066406_1066_1890 | 233 |
| 13 | 3300047317 | Ga0495604_0083076 | Ga0495604_0083076_933_1757 | 233 |
| 14 | 3300047322 | Ga0495680_0008177 | Ga0495680_0008177_7891_8715 | 233 |
| 15 | 3300047443 | Ga0495687_000012 | Ga0495687_000012_199479_200300 | 233 |
| 16 | 3300047444 | Ga0495675_0008485 | Ga0495675_0008485_3501_4325 | 233 |
| 17 | 3300047445 | Ga0495677_0051923 | Ga0495677_0051923_312_1196 | 233 |
| 18 | 3300047673 | Ga0495593_0047773 | Ga0495593_0047773_1138_1962 | 233 |
| 19 | 3300046460 | Ga0495638_0094703 | Ga0495638_0094703_493_1314 | 235 |
| 20 | 3300047447 | Ga0495685_041798 | Ga0495685_041798_754_1548 | 235 |
| 21 | 3300049581 | Ga0501047_0214331 | Ga0501047_0214331_58_765 | 235 |
| 22 | 3300006195 | Ga0075366_10106131 | Ga0075366_101061312 | 238 |
| 23 | 3300050493 | nmdc:mga0k408_34744_c2 | nmdc:mga0k408_34744_c2_622_1437 | 238 |
| 24 | 3300009177 | Ga0105248_10016666 | Ga0105248_100166668 | 244 |
| 25 | 3300009545 | Ga0105237_10036468 | Ga0105237_100364684 | 244 |
| 26 | 3300010375 | Ga0105239_10411799 | Ga0105239_104117992 | 244 |
| 27 | 3300005329 | Ga0070683_100174916 | Ga0070683_1001749162 | 245 |
| 28 | 3300025941 | Ga0207711_10234293 | Ga0207711_102342932 | 245 |
| 29 | 3300026041 | Ga0207639_10576393 | Ga0207639_105763932 | 245 |
| 30 | 3300005439 | Ga0070711_100049045 | Ga0070711_1000490452 | 250 |
| 31 | 3300006163 | Ga0070715_10062816 | Ga0070715_100628162 | 250 |
| 32 | 3300006175 | Ga0070712_100058143 | Ga0070712_1000581432 | 250 |
| 33 | 3300013306 | Ga0163162_10219947 | Ga0163162_102199472 | 250 |
| 34 | 3300025915 | Ga0207693_10056456 | Ga0207693_100564563 | 250 |
| 35 | 3300005329 | Ga0070683_100870185 | Ga0070683_1008701851 | 252 |
| 36 | 3300006051 | Ga0075364_10000495 | Ga0075364_100004958 | 252 |
| 37 | 3300017792 | Ga0163161_10143859 | Ga0163161_101438592 | 252 |
| 38 | 3300025923 | Ga0207681_10010671 | Ga0207681_100106714 | 252 |
| 39 | 3300028577 | Ga0265318_10121352 | Ga0265318_101213522 | 252 |
| 40 | 3300037312 | Ga0395899_0002152 | Ga0395899_0002152_9988_10767 | 252 |
| 41 | 3300037418 | Ga0395900_0006722 | Ga0395900_0006722_1687_2466 | 252 |
| 42 | 3300037466 | Ga0395898_0047216 | Ga0395898_0047216_2892_3671 | 252 |
| 43 | 3300037471 | Ga0395905_0066655 | Ga0395905_0066655_2253_3026 | 252 |
| 44 | 3300038443 | Ga0395901_0011310 | Ga0395901_0011310_236_1015 | 252 |
| 45 | 3300044694 | Ga0466963_0005343 | Ga0466963_0005343_2033_2812 | 252 |
| 46 | 3300046463 | Ga0495653_0013037 | Ga0495653_0013037_2571_3344 | 252 |
| 47 | 3300046471 | Ga0495650_0043067 | Ga0495650_0043067_16_789 | 252 |
| 48 | 3300046500 | Ga0495596_0042324 | Ga0495596_0042324_497_1270 | 252 |
| 49 | 3300046506 | Ga0495583_0007961 | Ga0495583_0007961_2973_3764 | 252 |
| 50 | 3300046507 | Ga0495606_0000062 | Ga0495606_0000062_44344_45228 | 252 |
| 51 | 3300046518 | Ga0495631_0114747 | Ga0495631_0114747_233_1006 | 252 |
| 52 | 3300046522 | Ga0495643_0000167 | Ga0495643_0000167_41886_42758 | 252 |
| 53 | 3300046531 | Ga0495665_0133025 | Ga0495665_0133025_363_1136 | 252 |
| 54 | 3300046536 | Ga0495587_0078349 | Ga0495587_0078349_887_1660 | 252 |
| 55 | 3300046665 | Ga0495661_0099259 | Ga0495661_0099259_57_848 | 252 |
| 56 | 3300047315 | Ga0495581_0218825 | Ga0495581_0218825_190_963 | 252 |
| 57 | 3300047322 | Ga0495680_0013979 | Ga0495680_0013979_6001_6774 | 252 |
| 58 | 3300047444 | Ga0495675_0130896 | Ga0495675_0130896_744_1517 | 252 |
| 59 | 3300048925 | Ga0496122_0001600 | Ga0496122_0001600_25246_26034 | 252 |
| 60 | 3300048926 | Ga0496123_0001311 | Ga0496123_0001311_9282_10070 | 252 |
| 61 | 3300048927 | Ga0496124_0010750 | Ga0496124_0010750_1913_2701 | 252 |
| 62 | 3300050491 | nmdc:mga00v17_236614_c1 | nmdc:mga00v17_236614_c1_147_923 | 252 |
| 63 | 3300053122 | Ga0500608_104700 | Ga0500608_104700_29_814 | 252 |
| 64 | 3300053136 | Ga0500559_0007380 | Ga0500559_0007380_3999_4784 | 252 |
| 65 | 3300053136 | Ga0500559_0143531 | Ga0500559_0143531_93_878 | 252 |
| 66 | 3300053140 | Ga0500573_0140020 | Ga0500573_0140020_348_1133 | 252 |
| 67 | iso_pu_bacteria | 2842747753 | 2842752609 | 252 |
| 68 | 3300013308 | Ga0157375_10751577 | Ga0157375_107515772 | 253 |
| 69 | 3300021441 | Ga0213871_10024315 | Ga0213871_100243152 | 253 |
| 70 | 3300031241 | Ga0265325_10038125 | Ga0265325_100381252 | 253 |
| 71 | 3300031249 | Ga0265339_10041692 | Ga0265339_100416922 | 253 |
| 72 | 3300031344 | Ga0265316_10003477 | Ga0265316_1000347713 | 253 |
| 73 | 3300037471 | Ga0395905_0201693 | Ga0395905_0201693_52_837 | 253 |
| 74 | 3300039438 | Ga0436360_0215114 | Ga0436360_0215114_852_1655 | 253 |
| 75 | 3300039438 | Ga0436360_0461738 | Ga0436360_0461738_1625_2428 | 253 |
| 76 | 3300039447 | Ga0436361_0462538 | Ga0436361_0462538_1823_2626 | 253 |
| 77 | 3300039447 | Ga0436361_0514817 | Ga0436361_0514817_822_1625 | 253 |
| 78 | 3300039447 | Ga0436361_0849281 | Ga0436361_0849281_390_1193 | 253 |
| 79 | 3300039453 | Ga0436362_1120682 | Ga0436362_1120682_176_979 | 253 |
| 80 | 3300044712 | Ga0453684_0622441 | Ga0453684_0622441_112_897 | 253 |
| 81 | 3300046519 | Ga0495632_0055108 | Ga0495632_0055108_129_953 | 253 |
| 82 | 3300046665 | Ga0495661_0006828 | Ga0495661_0006828_290_1111 | 253 |
| 83 | 3300049570 | Ga0501033_0042661 | Ga0501033_0042661_1662_2429 | 253 |
| 84 | 3300049822 | Ga0501035_0032503 | Ga0501035_0032503_2542_3309 | 253 |
| 85 | 3300049823 | Ga0501044_0076598 | Ga0501044_0076598_1569_2336 | 253 |
| 86 | iso_pu_bacteria | 2816332119 | 2816427124 | 253 |
| 87 | iso_pu_bacteria | 2894023352 | 2894027255 | 253 |
| 88 | 3300005548 | Ga0070665_100604171 | Ga0070665_1006041712 | 254 |
| 89 | 3300009551 | Ga0105238_10008682 | Ga0105238_100086829 | 254 |
| 90 | 3300014325 | Ga0163163_10201251 | Ga0163163_102012512 | 254 |
| 91 | 3300021384 | Ga0213876_10000312 | Ga0213876_1000031218 | 254 |
| 92 | 3300025910 | Ga0207684_10124376 | Ga0207684_101243762 | 254 |
| 93 | 3300025922 | Ga0207646_10279276 | Ga0207646_102792762 | 254 |
| 94 | 3300037471 | Ga0395905_0078513 | Ga0395905_0078513_1151_1966 | 254 |
| 95 | 3300037471 | Ga0395905_0111250 | Ga0395905_0111250_1267_2082 | 254 |
| 96 | 3300037471 | Ga0395905_0218478 | Ga0395905_0218478_799_1614 | 254 |
| 97 | 3300039453 | Ga0436362_0165644 | Ga0436362_0165644_61_945 | 254 |
| 98 | 3300046457 | Ga0495590_0001807 | Ga0495590_0001807_6479_7318 | 254 |
| 99 | 3300048918 | Ga0496115_0385692 | Ga0496115_0385692_38_817 | 254 |
| 100 | 3300048928 | Ga0496125_0003280 | Ga0496125_0003280_81_899 | 254 |
| 101 | 3300003320 | rootH2_10081945 | rootH2_100819453 | 255 |
| 102 | 3300005327 | Ga0070658_10152042 | Ga0070658_101520422 | 255 |
| 103 | 3300005445 | Ga0070708_100033241 | Ga0070708_1000332413 | 255 |
| 104 | 3300005445 | Ga0070708_100404685 | Ga0070708_1004046852 | 255 |
| 105 | 3300005471 | Ga0070698_100026674 | Ga0070698_1000266743 | 255 |
| 106 | 3300005518 | Ga0070699_100095810 | Ga0070699_1000958103 | 255 |
| 107 | 3300005536 | Ga0070697_100039058 | Ga0070697_1000390582 | 255 |
| 108 | 3300005577 | Ga0068857_100285846 | Ga0068857_1002858462 | 255 |
| 109 | 3300006186 | Ga0075369_10082132 | Ga0075369_100821322 | 255 |
| 110 | 3300021361 | Ga0213872_10001563 | Ga0213872_100015636 | 255 |
| 111 | 3300021361 | Ga0213872_10004040 | Ga0213872_100040403 | 255 |
| 112 | 3300021361 | Ga0213872_10032414 | Ga0213872_100324141 | 255 |
| 113 | 3300025922 | Ga0207646_10001833 | Ga0207646_1000183310 | 255 |
| 114 | 3300027614 | Ga0209970_1002779 | Ga0209970_10027792 | 255 |
| 115 | 3300031824 | Ga0307413_10317358 | Ga0307413_103173582 | 255 |
| 116 | 3300037853 | Ga0436364_0098097 | Ga0436364_0098097_139_1083 | 255 |
| 117 | 3300037853 | Ga0436364_0733282 | Ga0436364_0733282_522_1364 | 255 |
| 118 | 3300039438 | Ga0436360_0186662 | Ga0436360_0186662_189_1112 | 255 |
| 119 | 3300039438 | Ga0436360_0315767 | Ga0436360_0315767_411_1238 | 255 |
| 120 | 3300039438 | Ga0436360_0775859 | Ga0436360_0775859_1870_2697 | 255 |
| 121 | 3300039447 | Ga0436361_0075558 | Ga0436361_0075558_6704_7531 | 255 |
| 122 | 3300039447 | Ga0436361_0191513 | Ga0436361_0191513_285_1121 | 255 |
| 123 | 3300039447 | Ga0436361_0456229 | Ga0436361_0456229_4801_5724 | 255 |
| 124 | 3300039450 | Ga0436363_1682693 | Ga0436363_1682693_2502_3341 | 255 |
| 125 | 3300039453 | Ga0436362_0752418 | Ga0436362_0752418_149_976 | 255 |
| 126 | 3300039453 | Ga0436362_0845298 | Ga0436362_0845298_288_1115 | 255 |
| 127 | 3300046460 | Ga0495638_0067367 | Ga0495638_0067367_283_1050 | 255 |
| 128 | 3300046660 | Ga0495625_0212007 | Ga0495625_0212007_131_898 | 255 |
| 129 | 3300048925 | Ga0496122_0044758 | Ga0496122_0044758_758_1591 | 255 |
| 130 | 3300049572 | Ga0501036_0011134 | Ga0501036_0011134_6219_6998 | 255 |
| 131 | 3300049573 | Ga0501037_0111158 | Ga0501037_0111158_11_790 | 255 |
| 132 | 3300049574 | Ga0501038_0099831 | Ga0501038_0099831_443_1222 | 255 |
| 133 | 3300049575 | Ga0501039_0004385 | Ga0501039_0004385_8338_9117 | 255 |
| 134 | 3300049576 | Ga0501040_0040322 | Ga0501040_0040322_333_1112 | 255 |
| 135 | 3300049580 | Ga0501046_0019155 | Ga0501046_0019155_2878_3657 | 255 |
| 136 | 3300049582 | Ga0501048_0006431 | Ga0501048_0006431_2565_3344 | 255 |
| 137 | 3300049583 | Ga0501067_0000249 | Ga0501067_0000249_26913_27740 | 255 |
| 138 | 3300049584 | Ga0501068_0046442 | Ga0501068_0046442_1045_1824 | 255 |
| 139 | 3300049586 | Ga0501070_0044231 | Ga0501070_0044231_1807_2586 | 255 |
| 140 | 3300049587 | Ga0501071_0002275 | Ga0501071_0002275_6122_6901 | 255 |
| 141 | 3300049587 | Ga0501071_0326397 | Ga0501071_0326397_317_1096 | 255 |
| 142 | 3300049588 | Ga0501072_0003422 | Ga0501072_0003422_11012_11791 | 255 |
| 143 | 3300049589 | Ga0501073_0115695 | Ga0501073_0115695_811_1590 | 255 |
| 144 | 3300049590 | Ga0501074_0003279 | Ga0501074_0003279_189_968 | 255 |
| 145 | 3300049591 | Ga0501075_0001717 | Ga0501075_0001717_245_1024 | 255 |
| 146 | 3300049592 | Ga0501076_0001399 | Ga0501076_0001399_3081_3860 | 255 |
| 147 | 3300049593 | Ga0501077_0016044 | Ga0501077_0016044_2097_2876 | 255 |
| 148 | 3300049741 | Ga0501079_0011503 | Ga0501079_0011503_154_933 | 255 |
| 149 | 3300049743 | Ga0501081_0051170 | Ga0501081_0051170_1097_1876 | 255 |
| 150 | 3300049823 | Ga0501044_0096167 | Ga0501044_0096167_596_1378 | 255 |
| 151 | 3300049824 | Ga0501045_0003995 | Ga0501045_0003995_9250_10029 | 255 |
| 152 | 3300049824 | Ga0501045_0506477 | Ga0501045_0506477_36_815 | 255 |
| 153 | 3300050516 | nmdc:mga0sz30_78090_c1 | nmdc:mga0sz30_78090_c1_561_1328 | 255 |
| 154 | 3300053139 | Ga0500568_0000103 | Ga0500568_0000103_23639_24412 | 255 |
| 155 | 3300054114 | Ga0501084_0005136 | Ga0501084_0005136_1504_2283 | 255 |
| 156 | 3300061734 | Ga0530510_0129920 | Ga0530510_0129920_632_1411 | 255 |
| 157 | iso_pu_bacteria | 2511231221 | 2512036162 | 255 |
| 158 | iso_pu_bacteria | 2808606384 | 2808974222 | 255 |
| 159 | iso_pu_bacteria | 2808606390 | 2809009008 | 255 |
| 160 | iso_pu_bacteria | 2808606391 | 2809016159 | 255 |
| 161 | iso_pu_bacteria | 2897803580 | 2897807737 | 255 |
| 162 | iso_pu_bacteria | 8054002106 | 8054008531 | 255 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5duk-assembly1.cif.gz_B | n-terminal structure of putative dna binding transcription factor from thermoplasmatales archaeon scgc ab-539-n05 | 0.9497 | 8 | 62 |
| 1ysp-assembly1.cif.gz_A | crystal structure of the c-terminal domain of e. coli transcriptional regulator kdgr. | 0.9451 | 84 | 252 |
| 4awx-assembly1.cif.gz_B | moonlighting functions of feoc in the regulation of ferrous iron transport in feo | 0.9361 | 15 | 68 |
| 7c0i-assembly1.cif.gz_A | crystal structure of chimeric mutant of e3l in complex with z-dna | 0.9356 | 15 | 68 |
| 3f23-assembly1.cif.gz_A | crystal structure of zalpha in complex with d(cggccg) | 0.9333 | 11 | 68 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2xrnA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9636 | 12 | 69 | 1.10.10.10 |
| af_P37671_22_94_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.957 | 10 | 77 | 1.10.10.10 |
| af_A0A368UHH6_2_74_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9499 | 14 | 62 | 1.10.10.10 |
| af_P0ACK8_1_59_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9495 | 11 | 67 | 1.10.10.10 |
| af_P71977_12_75_1.10.10.10 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.9455 | 11 | 69 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A558A1F3-F1-model_v4 | IclR family transcriptional regulator | 0.9727 | 162 | 252 |
GO:0003677
GO:0003700 GO:0045892 |
| AF-A0A530M694-F1-model_v4 | deleted | 0.9484 | 136 | 229 |
|
| AF-A0A4Q3R779-F1-model_v4 | deleted | 0.9472 | 135 | 251 |
|
| AF-A0A2N8GSN1-F1-model_v4 | deleted | 0.9469 | 157 | 245 |
|
| AF-M0PRZ4-F1-model_v4 | IclR family transcriptional regulator | 0.9453 | 139 | 255 |
GO:0003677
GO:0003700 GO:0045892 |
Predicted Structure (AlphaFold2)
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