F239759

General Info

Members Datasets Scaffolds Average Seq Length
162 97 324 363

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0252467|Ga0373937_0252467_50_1018
Length 314
Sequence VGQRFVEIEEQKIDEDTVLMDSVYRLNCPLADMSPIAVEPDFTRKYLLSANNEALVKKIVTAFDRVAWEKEFVLCEGSGHAGVGSVFDLSNAQVAKILGAKVIIVSQAGIGKPIDEVSLNQALFEKEGVEIIGVILNKAIPEKLDYITHFARRGLKRLPHQSILRQPTMDLLKEELRAKAINKARDTNNLVECVVVGAMGVQHVMEFLVHGALVIVPGDREDIIMAAAATLIGHATDGLAGMVLTGNLRPSASVLKVIQELPFPVLLAQEDIYQVASHVHDLTVKTRPNDTQKISVIRDLIAKHVDVNKILEAL

Samples

Sample ID Description Type Environment
1 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
40 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
41 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
42 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
43 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
44 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
47 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
48 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
49 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
50 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
51 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
52 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
53 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
60 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
61 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
62 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
63 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
64 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
65 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
66 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
67 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
68 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
69 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.62
Rhizosphere 99.38
Stem 0
Stem Tuber 0
Unclassified 17.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373937_0252467 3300036401 Bacteria 1663
2 Ga0070658_10040758 3300005327 Bacteria 3747
3 Ga0070690_100066987 3300005330 Bacteria 2325
4 Ga0070689_100001051 3300005340 Bacteria 17344
5 Ga0070689_100151373 3300005340 Bacteria 1871
6 Ga0070691_10034342 3300005341 Bacteria 2387
7 Ga0070688_100054576 3300005365 Unclassified 2503
8 Ga0070714_100101614 3300005435 Bacteria 2534
9 Ga0070681_10040476 3300005458 Bacteria 4669
10 Ga0070686_100001221 3300005544 Bacteria 14619
11 Ga0068855_100009609 3300005563 Bacteria 11670
12 Ga0068855_100402237 3300005563 Unclassified 1500
13 Ga0068857_100101402 3300005577 Bacteria 2583
14 Ga0068856_100000172 3300005614 Bacteria 67506
15 Ga0068856_100022695 3300005614 Bacteria 6101
16 Ga0068856_100045992 3300005614 Bacteria 4298
17 Ga0068859_100018903 3300005617 Bacteria 6922
18 Ga0068859_100335201 3300005617 Bacteria 1607
19 Ga0068864_100468621 3300005618 Bacteria 1207
20 Ga0068863_100030244 3300005841 Bacteria 5172
21 Ga0068871_100168084 3300006358 Bacteria 1878
22 Ga0075431_100050051 3300006847 Bacteria 4308
23 Ga0075431_100151796 3300006847 Bacteria 2385
24 Ga0075434_100168017 3300006871 Bacteria 2213
25 Ga0097620_100018903 3300006931 Bacteria 6922
26 Ga0097620_100335184 3300006931 Bacteria 1607
27 Ga0099794_10011578 3300007265 Bacteria 3780
28 Ga0105240_10083123 3300009093 Bacteria 3930
29 Ga0111539_10037466 3300009094 Bacteria 5855
30 Ga0111539_10140084 3300009094 Unclassified 2832
31 Ga0111539_10229060 3300009094 Unclassified 2164
32 Ga0105238_10015976 3300009551 Bacteria 7595
33 Ga0105238_10091420 3300009551 Bacteria 3031
34 Ga0105238_10152902 3300009551 Bacteria 2282
35 Ga0105238_10540491 3300009551 Unclassified 1169
36 Ga0157371_10060170 3300013102 Bacteria 2693
37 Ga0157370_10012729 3300013104 Bacteria 8706
38 Ga0157374_10295538 3300013296 Unclassified 1602
39 Ga0163163_10123658 3300014325 Bacteria 2623
40 Ga0207705_10027609 3300025909 Bacteria 4048
41 Ga0207707_10028089 3300025912 Bacteria 4918
42 Ga0207663_10071253 3300025916 Bacteria 2242
43 Ga0207694_10010165 3300025924 Bacteria 7091
44 Ga0207694_10020778 3300025924 Bacteria 4969
45 Ga0207694_10096059 3300025924 Bacteria 2344
46 Ga0207694_10382177 3300025924 Unclassified 1169
47 Ga0207664_10007030 3300025929 Bacteria 7794
48 Ga0207670_10004342 3300025936 Bacteria 7619
49 Ga0207667_10022084 3300025949 Bacteria 7039
50 Ga0207667_10043937 3300025949 Bacteria 4739
51 Ga0207702_10000407 3300026078 Bacteria 49121
52 Ga0207702_10100198 3300026078 Bacteria 2555
53 Ga0207641_10151157 3300026088 Unclassified 2103
54 Ga0207674_10007808 3300026116 Bacteria 12441
55 Ga0207683_10216484 3300026121 Bacteria 1745
56 Ga0265337_1004764 3300028556 Bacteria 5557
57 Ga0265337_1009682 3300028556 Bacteria 3425
58 Ga0265337_1010438 3300028556 Bacteria 3253
59 Ga0265326_10040384 3300028558 Unclassified 1325
60 Ga0265319_1000001 3300028563 Bacteria 549513
61 Ga0265319_1007487 3300028563 Bacteria 4904
62 Ga0265319_1022879 3300028563 Unclassified 2270
63 Ga0265334_10050765 3300028573 Bacteria 1592
64 Ga0265334_10066892 3300028573 Unclassified 1344
65 Ga0265323_10000043 3300028653 Bacteria 69334
66 Ga0265323_10006278 3300028653 Bacteria 5000
67 Ga0265336_10001050 3300028666 Bacteria 13502
68 Ga0265338_10000008 3300028800 Bacteria 481542
69 Ga0265338_10000041 3300028800 Bacteria 230676
70 Ga0265338_10000062 3300028800 Bacteria 196060
71 Ga0265338_10001731 3300028800 Bacteria 34533
72 Ga0265338_10003591 3300028800 Bacteria 21645
73 Ga0265338_10004607 3300028800 Bacteria 18530
74 Ga0265338_10006519 3300028800 Bacteria 14840
75 Ga0265338_10006851 3300028800 Bacteria 14351
76 Ga0265338_10007437 3300028800 Bacteria 13596
77 Ga0265338_10041219 3300028800 Bacteria 4322
78 Ga0265338_10044116 3300028800 Bacteria 4122
79 Ga0265338_10074146 3300028800 Bacteria 2896
80 Ga0265338_10121739 3300028800 Unclassified 2078
81 Ga0265338_10190062 3300028800 Bacteria 1558
82 Ga0265324_10000719 3300029957 Bacteria 22021
83 Ga0265324_10008567 3300029957 Unclassified 4058
84 Ga0265324_10008955 3300029957 Bacteria 3937
85 Ga0265324_10018151 3300029957 Bacteria 2551
86 Ga0265324_10028873 3300029957 Bacteria 1954
87 Ga0265324_10036187 3300029957 Unclassified 1717
88 Ga0265324_10058845 3300029957 Unclassified 1314
89 Ga0265328_10021745 3300031239 Bacteria 2446
90 Ga0265320_10000303 3300031240 Bacteria 40288
91 Ga0265320_10000376 3300031240 Bacteria 36363
92 Ga0265320_10014842 3300031240 Bacteria 4419
93 Ga0265320_10030384 3300031240 Bacteria 2786
94 Ga0265325_10014957 3300031241 Bacteria 4374
95 Ga0265329_10002115 3300031242 Bacteria 9200
96 Ga0265340_10034495 3300031247 Bacteria 2516
97 Ga0265339_10051092 3300031249 Unclassified 2258
98 Ga0265339_10119021 3300031249 Bacteria 1359
99 Ga0265331_10014647 3300031250 Unclassified 4167
100 Ga0265327_10000313 3300031251 Bacteria 93102
101 Ga0265327_10003039 3300031251 Bacteria 16619
102 Ga0265327_10020212 3300031251 Bacteria 4065
103 Ga0265316_10001700 3300031344 Bacteria 23353
104 Ga0265316_10013960 3300031344 Bacteria 7103
105 Ga0265316_10056822 3300031344 Bacteria 3054
106 Ga0265314_10001082 3300031711 Bacteria 31564
107 Ga0265314_10020884 3300031711 Bacteria 5048
108 Ga0265314_10049380 3300031711 Bacteria 2946
109 Ga0265314_10050363 3300031711 Bacteria 2910
110 Ga0265342_10016753 3300031712 Bacteria 4781
111 Ga0307416_100324878 3300032002 Bacteria 1543
112 Ga0373930_0006823 3300034816 Unclassified 1945
113 Ga0373929_0000524 3300035085 Bacteria 7395
114 Ga0373944_0000023 3300035089 Bacteria 27187
115 Ga0373932_0000001 3300035112 Bacteria 1459067
116 Ga0373945_0007916 3300035116 Bacteria 3450
117 Ga0373931_0000008 3300035691 Bacteria 362269
118 Ga0373935_0009339 3300035692 Bacteria 5874
119 Ga0373927_0009191 3300035695 Bacteria 6632
120 Ga0373933_0059216 3300035724 Unclassified 2306
121 Ga0373947_0011826 3300035725 Bacteria 5001
122 Ga0373937_0003062 3300036401 Bacteria 13981
123 Ga0373925_0000077 3300037068 Bacteria 105383
124 Ga0395901_0372413 3300038443 Unclassified 1471
125 Ga0451577_0073327 3300042876 Bacteria 3054
126 Ga0451577_0167834 3300042876 Unclassified 1978
127 Ga0453684_0019859 3300044712 Bacteria 10194
128 Ga0453684_0132398 3300044712 Bacteria 2990
129 Ga0453684_0207446 3300044712 Unclassified 2280
130 Ga0451576_0310014 3300045051 Bacteria 1651
131 Ga0495592_0130474 3300046454 Bacteria 1758
132 Ga0495594_0300389 3300046499 Unclassified 915
133 Ga0495618_0000975 3300046514 Bacteria 19607
134 Ga0495618_0209310 3300046514 Bacteria 1233
135 Ga0495630_0105538 3300046517 Bacteria 2133
136 Ga0495630_0204673 3300046517 Bacteria 1506
137 Ga0495640_0062895 3300046533 Bacteria 2516
138 Ga0495586_0000849 3300046535 Bacteria 17549
139 Ga0495645_0241108 3300046543 Unclassified 1206
140 Ga0495634_0002082 3300046642 Bacteria 16904
141 Ga0495613_0002258 3300046689 Bacteria 14566
142 Ga0495613_0157013 3300046689 Unclassified 1620
143 Ga0495680_0016215 3300047322 Bacteria 6407
144 Ga0495684_0049514 3300047471 Unclassified 3210
145 Ga0495684_0083082 3300047471 Bacteria 2429
146 Ga0496115_0015715 3300048918 Bacteria 5748
147 Ga0501031_0000391 3300049568 Bacteria 25675
148 Ga0501032_0002354 3300049569 Bacteria 14812
149 Ga0501032_0059420 3300049569 Bacteria 2566
150 Ga0501033_0009658 3300049570 Bacteria 7420
151 Ga0501033_0149179 3300049570 Bacteria 1688
152 Ga0501034_0436247 3300049571 Unclassified 1229
153 Ga0501037_0051462 3300049573 Bacteria 3013
154 Ga0501047_0045837 3300049581 Bacteria 4227
155 Ga0501080_0077894 3300049742 Bacteria 3083
156 Ga0501035_0036722 3300049822 Bacteria 4439
157 Ga0501035_0093717 3300049822 Unclassified 2642
158 Ga0501044_0000741 3300049823 Bacteria 39342
159 nmdc:mga0qj67_120364_c1 3300050509 Unclassified 2123
160 nmdc:mga06r32_101942_c1 3300050510 Bacteria 2817
161 nmdc:mga06r32_25435_c1 3300050510 Bacteria 5508
162 nmdc:mga0n895_172410_c1 3300050512 Bacteria 2195
163 Ga0373937_0252467
164 Ga0070658_10040758
165 Ga0070690_100066987
166 Ga0070689_100001051
167 Ga0070689_100151373
168 Ga0070691_10034342
169 Ga0070688_100054576
170 Ga0070714_100101614
171 Ga0070681_10040476
172 Ga0070686_100001221
173 Ga0068855_100009609
174 Ga0068855_100402237
175 Ga0068857_100101402
176 Ga0068856_100000172
177 Ga0068856_100022695
178 Ga0068856_100045992
179 Ga0068859_100018903
180 Ga0068859_100335201
181 Ga0068864_100468621
182 Ga0068863_100030244
183 Ga0068871_100168084
184 Ga0075431_100050051
185 Ga0075431_100151796
186 Ga0075434_100168017
187 Ga0097620_100018903
188 Ga0097620_100335184
189 Ga0099794_10011578
190 Ga0105240_10083123
191 Ga0111539_10037466
192 Ga0111539_10140084
193 Ga0111539_10229060
194 Ga0105238_10015976
195 Ga0105238_10091420
196 Ga0105238_10152902
197 Ga0105238_10540491
198 Ga0157371_10060170
199 Ga0157370_10012729
200 Ga0157374_10295538
201 Ga0163163_10123658
202 Ga0207705_10027609
203 Ga0207707_10028089
204 Ga0207663_10071253
205 Ga0207694_10010165
206 Ga0207694_10020778
207 Ga0207694_10096059
208 Ga0207694_10382177
209 Ga0207664_10007030
210 Ga0207670_10004342
211 Ga0207667_10022084
212 Ga0207667_10043937
213 Ga0207702_10000407
214 Ga0207702_10100198
215 Ga0207641_10151157
216 Ga0207674_10007808
217 Ga0207683_10216484
218 Ga0265337_1004764
219 Ga0265337_1009682
220 Ga0265337_1010438
221 Ga0265326_10040384
222 Ga0265319_1000001
223 Ga0265319_1007487
224 Ga0265319_1022879
225 Ga0265334_10050765
226 Ga0265334_10066892
227 Ga0265323_10000043
228 Ga0265323_10006278
229 Ga0265336_10001050
230 Ga0265338_10000008
231 Ga0265338_10000041
232 Ga0265338_10000062
233 Ga0265338_10001731
234 Ga0265338_10003591
235 Ga0265338_10004607
236 Ga0265338_10006519
237 Ga0265338_10006851
238 Ga0265338_10007437
239 Ga0265338_10041219
240 Ga0265338_10044116
241 Ga0265338_10074146
242 Ga0265338_10121739
243 Ga0265338_10190062
244 Ga0265324_10000719
245 Ga0265324_10008567
246 Ga0265324_10008955
247 Ga0265324_10018151
248 Ga0265324_10028873
249 Ga0265324_10036187
250 Ga0265324_10058845
251 Ga0265328_10021745
252 Ga0265320_10000303
253 Ga0265320_10000376
254 Ga0265320_10014842
255 Ga0265320_10030384
256 Ga0265325_10014957
257 Ga0265329_10002115
258 Ga0265340_10034495
259 Ga0265339_10051092
260 Ga0265339_10119021
261 Ga0265331_10014647
262 Ga0265327_10000313
263 Ga0265327_10003039
264 Ga0265327_10020212
265 Ga0265316_10001700
266 Ga0265316_10013960
267 Ga0265316_10056822
268 Ga0265314_10001082
269 Ga0265314_10020884
270 Ga0265314_10049380
271 Ga0265314_10050363
272 Ga0265342_10016753
273 Ga0307416_100324878
274 Ga0373930_0006823
275 Ga0373929_0000524
276 Ga0373944_0000023
277 Ga0373932_0000001
278 Ga0373945_0007916
279 Ga0373931_0000008
280 Ga0373935_0009339
281 Ga0373927_0009191
282 Ga0373933_0059216
283 Ga0373947_0011826
284 Ga0373937_0003062
285 Ga0373925_0000077
286 Ga0395901_0372413
287 Ga0451577_0073327
288 Ga0451577_0167834
289 Ga0453684_0019859
290 Ga0453684_0132398
291 Ga0453684_0207446
292 Ga0451576_0310014
293 Ga0495592_0130474
294 Ga0495594_0300389
295 Ga0495618_0000975
296 Ga0495618_0209310
297 Ga0495630_0105538
298 Ga0495630_0204673
299 Ga0495640_0062895
300 Ga0495586_0000849
301 Ga0495645_0241108
302 Ga0495634_0002082
303 Ga0495613_0002258
304 Ga0495613_0157013
305 Ga0495680_0016215
306 Ga0495684_0049514
307 Ga0495684_0083082
308 Ga0496115_0015715
309 Ga0501031_0000391
310 Ga0501032_0002354
311 Ga0501032_0059420
312 Ga0501033_0009658
313 Ga0501033_0149179
314 Ga0501034_0436247
315 Ga0501037_0051462
316 Ga0501047_0045837
317 Ga0501080_0077894
318 Ga0501035_0036722
319 Ga0501035_0093717
320 Ga0501044_0000741
321 nmdc:mga0qj67_120364_c1
322 nmdc:mga06r32_101942_c1
323 nmdc:mga06r32_25435_c1
324 nmdc:mga0n895_172410_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07085

DRTGG

DRTGG domain

171

282

0.96

PF13500

AAA_26

AAA domain

6

168

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ioj-assembly2.cif.gz_B crystal structure of protein af1212 from archaeoglobus fulgidus, pfam drtgg 0.8584 217 330
1dts-assembly1.cif.gz_A-2 crystal structure of an atp dependent carboxylase, dethiobiotin synthase, at 1.65 angstroms resolution 0.7874 5 211
2ioj-assembly2.cif.gz_B crystal structure of protein af1212 from archaeoglobus fulgidus, pfam drtgg 0.7807 217 330
1a82-assembly1.cif.gz_A dethiobiotin synthetase from escherichia coli, complex with substrates atp and diaminopelargonic acid 0.7791 5 211
1dae-assembly1.cif.gz_A dethiobiotin synthetase complexed with 3-(1-aminoethyl) nonanedioic acid 0.7784 5 211
ID Description Score Start End Superfamily
af_P9WHP1_199_342_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8941 214 351 3.40.1390.20
af_Q2FXM2_67_177_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8754 216 332 3.40.1390.20
af_P0A9M8_226_366_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8631 213 349 3.40.1390.20
2iojB00 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8564 218 330 3.40.1390.20
af_P9WHP1_199_342_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.854 214 351 3.40.1390.20
ID Description Score Start End GO Terms
AF-A0A3C1VHL1-F1-model_v4 DRTGG domain-containing protein 0.9868 1 364
AF-A0A7C3W7N8-F1-model_v4 Uncharacterized protein 0.9719 1 118
AF-A0A2J0LIX2-F1-model_v4 DRTGG domain-containing protein 0.9683 25 210
AF-A0A7V5LZV3-F1-model_v4 DRTGG domain-containing protein 0.9676 5 183
AF-A0A350ARU1-F1-model_v4 DRTGG domain-containing protein 0.9671 2 194

Map