F239729

General Info

Members Datasets Scaffolds Average Seq Length
162 125 324 350

Family's Representative Sequence

Representative Sequence 3300035171|Ga0373946_0076069|Ga0373946_0076069_257_1375
Length 372
Sequence MPICTMLSQCWKDTHNDLGDARVKFSNFLFPESRDPAHDGRVIDETLREARLTDELGFEVIWLAEHHFDGICAYVDPVSFAAALAVATQRAKIGFAVAQMSLHHPIRMAEQLALIDNISKGRLIVGLGRGTAYNIYDYQGYGLDHTEAQARFEEAEAIMFQAWRGEKFEYHGRFWDIKLPMLRPLPFTQPHPFVIRSASSEEGMLHIARQGRPFMMNVQSNAVTRHRMDLYCRTLREQGMDDAAVAHNVEQCWVWRNVFVAETDAEAERIAIPAFEAMHEHRTEMRRRVYEEQGVSIVPMPPPGTAPAARMVVEHSLIYGSPATVAEKLAQVDAIGIGGVIMQFRLGPMSHDDVAQSLTLFMHKVAPEVERR

Samples

Sample ID Description Type Environment
1 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
65 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
66 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
67 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
68 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
70 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
77 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
78 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
83 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
89 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
90 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
91 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
92 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
101 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
106 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
107 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
108 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
109 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
110 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
111 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
112 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
118 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
119 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
120 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
123 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
124 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
125 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.53
Metatranscriptomes 0
Isolates 2.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.41
Nodule 0
Rhizoplane 1.23
Rhizosphere 85.19
Stem 0
Stem Tuber 0
Unclassified 14.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373946_0076069 3300035171 Bacteria 1461
2 JGI25406J46586_10000115 3300003203 Bacteria 34812
3 Ga0070680_100077039 3300005336 Unclassified 2746
4 Ga0068868_100039394 3300005338 Bacteria 3672
5 Ga0070692_10062108 3300005345 Bacteria 1971
6 Ga0070675_100050017 3300005354 Bacteria 3432
7 Ga0070673_100056958 3300005364 Bacteria 3086
8 Ga0070667_100073774 3300005367 Bacteria 2910
9 Ga0070714_100082094 3300005435 Bacteria 2808
10 Ga0070713_100072772 3300005436 Bacteria 2908
11 Ga0070713_100075382 3300005436 Bacteria 2861
12 Ga0070713_100322492 3300005436 Bacteria 1427
13 Ga0070708_100295317 3300005445 Bacteria 1526
14 Ga0070681_10077437 3300005458 Bacteria 3283
15 Ga0070681_10112052 3300005458 Unclassified 2668
16 Ga0070681_10180399 3300005458 Bacteria 2033
17 Ga0070704_100087521 3300005549 Bacteria 2312
18 Ga0068857_100016229 3300005577 Bacteria 6525
19 Ga0068859_100149637 3300005617 Bacteria 2410
20 Ga0068864_100067308 3300005618 Bacteria 3110
21 Ga0068860_100115824 3300005843 Bacteria 2563
22 Ga0081455_10004951 3300005937 Unclassified 14730
23 Ga0081455_10044368 3300005937 Bacteria 3880
24 Ga0081538_10008237 3300005981 Bacteria 8883
25 Ga0081538_10032578 3300005981 Unclassified 3489
26 Ga0081538_10113957 3300005981 Bacteria 1319
27 Ga0081539_10000648 3300005985 Bacteria 69975
28 Ga0070717_10158052 3300006028 Bacteria 1965
29 Ga0075365_10020718 3300006038 Bacteria 4084
30 Ga0075363_100000832 3300006048 Bacteria 10720
31 Ga0075363_100003229 3300006048 Bacteria 6888
32 Ga0075364_10011531 3300006051 Bacteria 5372
33 Ga0075362_10048980 3300006177 Bacteria 1886
34 Ga0075367_10007471 3300006178 Bacteria 5598
35 Ga0097621_100143047 3300006237 Bacteria 2045
36 Ga0075428_100320251 3300006844 Unclassified 1666
37 Ga0075428_100333117 3300006844 Bacteria 1630
38 Ga0075430_100014460 3300006846 Bacteria 6723
39 Ga0075431_100089444 3300006847 Bacteria 3178
40 Ga0075431_100098494 3300006847 Unclassified 3018
41 Ga0075429_100091516 3300006880 Unclassified 2653
42 Ga0075436_100192286 3300006914 Bacteria 1444
43 Ga0097620_100149632 3300006931 Bacteria 2410
44 Ga0111539_10358030 3300009094 Bacteria 1698
45 Ga0105245_10029743 3300009098 Bacteria 4829
46 Ga0114129_10320378 3300009147 Unclassified 2061
47 Ga0105237_10239203 3300009545 Bacteria 1817
48 Ga0105238_10048685 3300009551 Bacteria 4270
49 Ga0157369_10046222 3300013105 Bacteria 4732
50 Ga0157378_10188205 3300013297 Unclassified 1945
51 Ga0163162_10302450 3300013306 Unclassified 1732
52 Ga0157380_10131663 3300014326 Bacteria 2135
53 Ga0182008_10039190 3300014497 Bacteria 2368
54 Ga0157379_10018584 3300014968 Bacteria 6130
55 Ga0213875_10000198 3300021388 Bacteria 61683
56 Ga0213875_10005446 3300021388 Bacteria 6833
57 Ga0207699_10087688 3300025906 Bacteria 1946
58 Ga0207707_10026437 3300025912 Bacteria 5073
59 Ga0207707_10087154 3300025912 Bacteria 2728
60 Ga0207707_10128325 3300025912 Bacteria 2217
61 Ga0207693_10082308 3300025915 Bacteria 2520
62 Ga0207663_10070530 3300025916 Bacteria 2252
63 Ga0207700_10019620 3300025928 Bacteria 4569
64 Ga0207700_10148002 3300025928 Bacteria 1938
65 Ga0207700_10188726 3300025928 Bacteria 1731
66 Ga0207664_10247407 3300025929 Unclassified 1555
67 Ga0207712_10121780 3300025961 Bacteria 1975
68 Ga0207658_10167659 3300025986 Bacteria 1806
69 Ga0207677_10183792 3300026023 Bacteria 1647
70 Ga0207702_10033331 3300026078 Bacteria 4302
71 Ga0207676_10285459 3300026095 Bacteria 1500
72 Ga0207674_10069126 3300026116 Bacteria 3552
73 Ga0207675_100082458 3300026118 Bacteria 3016
74 Ga0207683_10118995 3300026121 Bacteria 2370
75 Ga0268264_10090892 3300028381 Bacteria 2632
76 Ga0268264_10095507 3300028381 Bacteria 2572
77 Ga0265338_10004815 3300028800 Bacteria 18043
78 Ga0265338_10157353 3300028800 Unclassified 1759
79 Ga0265320_10028067 3300031240 Bacteria 2926
80 Ga0307408_100097806 3300031548 Bacteria 2230
81 Ga0373936_0024317 3300035113 Bacteria 2364
82 Ga0373936_0061043 3300035113 Unclassified 1539
83 Ga0373953_0011662 3300035117 Bacteria 3093
84 Ga0373954_0139143 3300035118 Unclassified 1184
85 Ga0373955_0028893 3300035172 Bacteria 2879
86 Ga0373955_0085521 3300035172 Unclassified 1790
87 Ga0373935_0032247 3300035692 Bacteria 3255
88 Ga0373927_0180247 3300035695 Bacteria 1386
89 Ga0373933_0072063 3300035724 Bacteria 2104
90 Ga0373933_0147465 3300035724 Bacteria 1488
91 Ga0373937_0009480 3300036401 Bacteria 8463
92 Ga0373937_0039358 3300036401 Bacteria 4309
93 Ga0373937_0054662 3300036401 Bacteria 3664
94 Ga0373937_0082089 3300036401 Bacteria 2982
95 Ga0373925_0042560 3300037068 Bacteria 3369
96 Ga0373925_0084839 3300037068 Bacteria 2414
97 Ga0373925_0198021 3300037068 Bacteria 1597
98 Ga0395905_0033942 3300037471 Bacteria 4792
99 Ga0436364_0296066 3300037853 Bacteria 1452
100 Ga0436364_0466445 3300037853 Bacteria 33380
101 Ga0436364_0735525 3300037853 Unclassified 2733
102 Ga0436364_1070807 3300037853 Bacteria 80692
103 Ga0436365_0439919 3300039437 Bacteria 1141
104 Ga0436360_0615160 3300039438 Bacteria 1190
105 Ga0436360_1057685 3300039438 Bacteria 1587
106 Ga0436360_1128964 3300039438 Bacteria 1967
107 Ga0436362_0403838 3300039453 Unclassified 3465
108 Ga0439441_014433 3300042001 Bacteria 1385
109 Ga0495651_0025085 3300046462 Bacteria 4639
110 Ga0495653_0129769 3300046463 Bacteria 1786
111 Ga0495639_0034663 3300046475 Bacteria 2258
112 Ga0495664_0138700 3300046477 Unclassified 1474
113 Ga0495608_0008999 3300046511 Bacteria 6983
114 Ga0495608_0051205 3300046511 Bacteria 2737
115 Ga0495618_0069033 3300046514 Bacteria 2247
116 Ga0495628_0032135 3300046516 Bacteria 4240
117 Ga0495628_0142077 3300046516 Bacteria 1832
118 Ga0495640_0044240 3300046533 Bacteria 3097
119 Ga0495587_0009853 3300046536 Bacteria 6102
120 Ga0495587_0030511 3300046536 Bacteria 3269
121 Ga0495645_0000978 3300046543 Bacteria 19470
122 Ga0495667_0005616 3300046559 Bacteria 8476
123 Ga0495635_0009952 3300046663 Bacteria 6646
124 Ga0495635_0021111 3300046663 Bacteria 4538
125 Ga0495657_0059417 3300046675 Bacteria 2536
126 Ga0495599_0003621 3300046678 Bacteria 9065
127 Ga0495674_0017018 3300047319 Bacteria 6776
128 Ga0495672_0114216 3300047320 Bacteria 1445
129 Ga0495680_0082882 3300047322 Bacteria 2419
130 Ga0495680_0094417 3300047322 Bacteria 2238
131 Ga0495675_0003715 3300047444 Bacteria 9222
132 Ga0495675_0107960 3300047444 Bacteria 1739
133 Ga0495602_0001603 3300048088 Bacteria 22473
134 Ga0496104_0220072 3300048907 Unclassified 1811
135 Ga0496112_0074003 3300048915 Bacteria 3368
136 Ga0496119_0018211 3300048922 Bacteria 5244
137 Ga0501031_0105083 3300049568 Bacteria 1843
138 Ga0501041_0081173 3300049577 Bacteria 1997
139 Ga0501047_0143689 3300049581 Bacteria 2264
140 Ga0501071_0144679 3300049587 Bacteria 1772
141 Ga0501073_0304894 3300049589 Bacteria 1099
142 Ga0501075_0185532 3300049591 Bacteria 1587
143 Ga0501081_0376078 3300049743 Unclassified 1049
144 nmdc:mga03683_38356_c1 3300050489 Bacteria 1956
145 nmdc:mga03n38_11620_c1 3300050490 Bacteria 3288
146 nmdc:mga03n38_38860_c1 3300050490 Unclassified 2061
147 nmdc:mga0yw44_11743_c1 3300050492 Bacteria 4538
148 nmdc:mga06z11_49749_c1 3300050494 Bacteria 2139
149 nmdc:mga07m45_4981_c1 3300050496 Bacteria 6558
150 nmdc:mga05p37_246509_c1 3300050507 Unclassified 2145
151 nmdc:mga09592_90867_c1 3300050508 Unclassified 2609
152 nmdc:mga0qj67_11263_c1 3300050509 Bacteria 6699
153 nmdc:mga06r32_34682_c1 3300050510 Unclassified 4759
154 nmdc:mga08x19_31399_c1 3300050514 Bacteria 3341
155 Ga0495601_0003613 3300053077 Bacteria 8893
156 Ga0495612_0002343 3300053078 Bacteria 7802
157 Ga0495619_0107949 3300053085 Bacteria 1899
158 Ga0501084_0215330 3300054114 Bacteria 1621
159 2883579347 2883577096 Bacteria 4709178
160 2894774824 2894772417 Bacteria 5305674
161 2929200545 2929199973 Bacteria 7260745
162 8055913899 8055909800 Bacteria 7278581
163 Ga0373946_0076069
164 JGI25406J46586_10000115
165 Ga0070680_100077039
166 Ga0068868_100039394
167 Ga0070692_10062108
168 Ga0070675_100050017
169 Ga0070673_100056958
170 Ga0070667_100073774
171 Ga0070714_100082094
172 Ga0070713_100072772
173 Ga0070713_100075382
174 Ga0070713_100322492
175 Ga0070708_100295317
176 Ga0070681_10077437
177 Ga0070681_10112052
178 Ga0070681_10180399
179 Ga0070704_100087521
180 Ga0068857_100016229
181 Ga0068859_100149637
182 Ga0068864_100067308
183 Ga0068860_100115824
184 Ga0081455_10004951
185 Ga0081455_10044368
186 Ga0081538_10008237
187 Ga0081538_10032578
188 Ga0081538_10113957
189 Ga0081539_10000648
190 Ga0070717_10158052
191 Ga0075365_10020718
192 Ga0075363_100000832
193 Ga0075363_100003229
194 Ga0075364_10011531
195 Ga0075362_10048980
196 Ga0075367_10007471
197 Ga0097621_100143047
198 Ga0075428_100320251
199 Ga0075428_100333117
200 Ga0075430_100014460
201 Ga0075431_100089444
202 Ga0075431_100098494
203 Ga0075429_100091516
204 Ga0075436_100192286
205 Ga0097620_100149632
206 Ga0111539_10358030
207 Ga0105245_10029743
208 Ga0114129_10320378
209 Ga0105237_10239203
210 Ga0105238_10048685
211 Ga0157369_10046222
212 Ga0157378_10188205
213 Ga0163162_10302450
214 Ga0157380_10131663
215 Ga0182008_10039190
216 Ga0157379_10018584
217 Ga0213875_10000198
218 Ga0213875_10005446
219 Ga0207699_10087688
220 Ga0207707_10026437
221 Ga0207707_10087154
222 Ga0207707_10128325
223 Ga0207693_10082308
224 Ga0207663_10070530
225 Ga0207700_10019620
226 Ga0207700_10148002
227 Ga0207700_10188726
228 Ga0207664_10247407
229 Ga0207712_10121780
230 Ga0207658_10167659
231 Ga0207677_10183792
232 Ga0207702_10033331
233 Ga0207676_10285459
234 Ga0207674_10069126
235 Ga0207675_100082458
236 Ga0207683_10118995
237 Ga0268264_10090892
238 Ga0268264_10095507
239 Ga0265338_10004815
240 Ga0265338_10157353
241 Ga0265320_10028067
242 Ga0307408_100097806
243 Ga0373936_0024317
244 Ga0373936_0061043
245 Ga0373953_0011662
246 Ga0373954_0139143
247 Ga0373955_0028893
248 Ga0373955_0085521
249 Ga0373935_0032247
250 Ga0373927_0180247
251 Ga0373933_0072063
252 Ga0373933_0147465
253 Ga0373937_0009480
254 Ga0373937_0039358
255 Ga0373937_0054662
256 Ga0373937_0082089
257 Ga0373925_0042560
258 Ga0373925_0084839
259 Ga0373925_0198021
260 Ga0395905_0033942
261 Ga0436364_0296066
262 Ga0436364_0466445
263 Ga0436364_0735525
264 Ga0436364_1070807
265 Ga0436365_0439919
266 Ga0436360_0615160
267 Ga0436360_1057685
268 Ga0436360_1128964
269 Ga0436362_0403838
270 Ga0439441_014433
271 Ga0495651_0025085
272 Ga0495653_0129769
273 Ga0495639_0034663
274 Ga0495664_0138700
275 Ga0495608_0008999
276 Ga0495608_0051205
277 Ga0495618_0069033
278 Ga0495628_0032135
279 Ga0495628_0142077
280 Ga0495640_0044240
281 Ga0495587_0009853
282 Ga0495587_0030511
283 Ga0495645_0000978
284 Ga0495667_0005616
285 Ga0495635_0009952
286 Ga0495635_0021111
287 Ga0495657_0059417
288 Ga0495599_0003621
289 Ga0495674_0017018
290 Ga0495672_0114216
291 Ga0495680_0082882
292 Ga0495680_0094417
293 Ga0495675_0003715
294 Ga0495675_0107960
295 Ga0495602_0001603
296 Ga0496104_0220072
297 Ga0496112_0074003
298 Ga0496119_0018211
299 Ga0501031_0105083
300 Ga0501041_0081173
301 Ga0501047_0143689
302 Ga0501071_0144679
303 Ga0501073_0304894
304 Ga0501075_0185532
305 Ga0501081_0376078
306 nmdc:mga03683_38356_c1
307 nmdc:mga03n38_11620_c1
308 nmdc:mga03n38_38860_c1
309 nmdc:mga0yw44_11743_c1
310 nmdc:mga06z11_49749_c1
311 nmdc:mga07m45_4981_c1
312 nmdc:mga05p37_246509_c1
313 nmdc:mga09592_90867_c1
314 nmdc:mga0qj67_11263_c1
315 nmdc:mga06r32_34682_c1
316 nmdc:mga08x19_31399_c1
317 Ga0495601_0003613
318 Ga0495612_0002343
319 Ga0495619_0107949
320 Ga0501084_0215330
321 2883579347
322 2894774824
323 2929200545
324 8055913899

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

23

339

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1luc-assembly1.cif.gz_A bacterial luciferase 0.872 2 346
1luc-assembly1.cif.gz_A bacterial luciferase 0.862 2 346
7bip-assembly1.cif.gz_B crystal structure of monooxygenase rslo1 from streptomyces bottropensis 0.8609 2 346
7bip-assembly1.cif.gz_B crystal structure of monooxygenase rslo1 from streptomyces bottropensis 0.8585 2 346
3fgc-assembly2.cif.gz_C crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication 0.8551 2 346
ID Description Score Start End Superfamily
3fgcC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8551 2 346 3.20.20.30
3fgcC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8459 2 346 3.20.20.30
2i7gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8203 3 343 3.20.20.30
af_Q2G136_3_353_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8178 2 344 3.20.20.30
1bslA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.8038 2 335 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A800NDI5-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9852 2 269 GO:0004497
GO:0005829
GO:0016705
AF-A0A2E4XRM9-F1-model_v4 Luciferase-like domain-containing protein 0.9835 2 345 GO:0004497
GO:0005829
GO:0016705
AF-A0A5N8YXT1-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9678 2 117 GO:0005829
GO:0016705
AF-A0A800NDI5-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9672 2 269 GO:0004497
GO:0005829
GO:0016705
AF-A0A3R8V7M6-F1-model_v4 LLM class flavin-dependent oxidoreductase 0.9545 2 346 GO:0004497
GO:0005829
GO:0016705

Map