F239659

General Info

Members Datasets Scaffolds Average Seq Length
162 132 116 504

Family's Representative Sequence

Representative Sequence 3300031911|Ga0307412_10011869|Ga0307412_100118694
Length 553
Sequence LPKLSQSKKGFPLKSGCEQFNVEKALSRFKNLDKADEKLISLKKTYDILVIGSGLGGLVSALILAKEGLKVCVLEKNNQYGGNLQTFSRDKLIFDTGVHYLGGLSKGQNLHQFFSYLEIIDDLELQKMDENGYDKITFEGDKIEYPHAQGYENFVEQLSKYFPDERENIENYCEEIQRICNHFPRYNVIGKDNYNEEILHLNTKRFIESITSNKKLQSVLLGSNFLYAGDSENVPFYVHALTVNSYIQSAYKCVKGGSQISKLLIRKLRQYGAEVHKHSEVSEFIFNENNTLIGAKTKSGQEYSAKQIISNIEIRSTIKLIGEDRLKKSFLNRVLSWEPVSSCFSVYLVLKPHAVLNFNYNIYHYSSEELVWNAYRYDKQAWPETYMLSSTASKHHPEFAESLTAISYMDFDEVKKWQNTFNTVADEHGRGKQYEKFKQEKAEKMIDVLEKKIPDLRDSIKNIYTSSPLSYRDYIGSFDGNMYGYIKSSENPLKTMVSPRTKIDNLFLTGQSVNMHRILGCTIGAFNTCAEILGKDVVDQRLTEMINKNRSEK

Samples

Sample ID Description Type Environment
1 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
2 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
3 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
4 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
5 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
6 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
7 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
8 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
9 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
10 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
11 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
12 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
13 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
14 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
15 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
16 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
17 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
18 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
19 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
20 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
21 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
22 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
23 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
24 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
25 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
26 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
27 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
28 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
29 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
30 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
31 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
32 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
33 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
34 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
35 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
36 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
37 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
38 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
39 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
40 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
41 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
42 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
43 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
44 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
45 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
46 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
47 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
48 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
49 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
50 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
51 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
52 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
53 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
54 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
55 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
56 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
57 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
58 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
59 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
60 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
61 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
62 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
63 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
64 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
65 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
66 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
67 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
81 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
113 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
114 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
115 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
116 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
117 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
131 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
132 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.6
Metatranscriptomes 0
Isolates 28.4

Biome Distribution

Category Percentage (%)
Aerial Root 1.23
Bulb 0
Endosphere 2.47
Nodule 0.62
Rhizoplane 0
Rhizosphere 74.69
Stem 0
Stem Tuber 0
Unclassified 20.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1002214 3300001915 Bacteria 5160
2 rootH2_10050665 3300003320 Bacteria 10767
3 rootL2_10098668 3300003322 Unclassified 4722
4 rootH1_10016087 3300003323 Bacteria 6929
5 rootH1_10078422 3300003323 Bacteria 6499
6 Ga0065714_10064456 3300005288 Bacteria 70947
7 Ga0065704_10070819 3300005289 Bacteria 15708
8 Ga0065704_10071263 3300005289 Bacteria 12153
9 Ga0070683_100001467 3300005329 Bacteria 18149
10 Ga0070670_100042565 3300005331 Bacteria 3904
11 Ga0068869_100031852 3300005334 Unclassified 3712
12 Ga0068869_100033023 3300005334 Bacteria 3651
13 Ga0070682_100000133 3300005337 Bacteria 61302
14 Ga0068868_100020243 3300005338 Bacteria 4995
15 Ga0070668_100047370 3300005347 Bacteria 3305
16 Ga0070668_100055532 3300005347 Bacteria 3057
17 Ga0070671_100102074 3300005355 Bacteria 2407
18 Ga0070667_100003107 3300005367 Bacteria 14285
19 Ga0070667_100146769 3300005367 Bacteria 2069
20 Ga0070678_100087826 3300005456 Unclassified 2375
21 Ga0070665_100038752 3300005548 Bacteria 4791
22 Ga0068861_100044964 3300005719 Bacteria 3323
23 Ga0068863_100011948 3300005841 Bacteria 8390
24 Ga0068860_100009371 3300005843 Bacteria 9734
25 Ga0068860_100048035 3300005843 Bacteria 4068
26 Ga0068862_100059604 3300005844 Bacteria 3278
27 Ga0105244_10000013 3300009036 Bacteria 258350
28 Ga0105250_10018414 3300009092 Bacteria 2828
29 Ga0105242_10014637 3300009176 Bacteria 6073
30 Ga0105249_10053190 3300009553 Bacteria 3701
31 Ga0157373_10000017 3300013100 Bacteria 173186
32 Ga0157371_10075859 3300013102 Bacteria 2381
33 Ga0157371_10093369 3300013102 Bacteria 2132
34 Ga0157371_10124604 3300013102 Bacteria 1832
35 Ga0157370_10004398 3300013104 Bacteria 16165
36 Ga0157370_10135374 3300013104 Bacteria 2297
37 Ga0157369_10000136 3300013105 Bacteria 104612
38 Ga0157374_10027367 3300013296 Bacteria 5142
39 Ga0157378_10005955 3300013297 Bacteria 10688
40 Ga0157378_10011173 3300013297 Bacteria 7855
41 Ga0157375_10000334 3300013308 Bacteria 42495
42 Ga0182008_10000036 3300014497 Bacteria 130349
43 Ga0182006_1000001 3300015261 Bacteria 1091090
44 Ga0163161_10038188 3300017792 Bacteria 3444
45 Ga0209436_101488 3300025208 Bacteria 8112
46 Ga0209130_1000665 3300025284 Bacteria 31274
47 Ga0209675_1000034 3300025291 Bacteria 267827
48 Ga0207426_1000051 3300025302 Bacteria 391700
49 Ga0207655_1000031 3300025728 Bacteria 392265
50 Ga0207642_10086597 3300025899 Bacteria 1536
51 Ga0207680_10012441 3300025903 Bacteria 4333
52 Ga0207645_10000496 3300025907 Bacteria 32469
53 Ga0207643_10044255 3300025908 Unclassified 2513
54 Ga0207709_10000216 3300025935 Bacteria 73193
55 Ga0207691_10014972 3300025940 Bacteria 7386
56 Ga0207689_10005978 3300025942 Bacteria 10766
57 Ga0207689_10021338 3300025942 Bacteria 5446
58 Ga0207689_10174079 3300025942 Bacteria 1775
59 Ga0207712_10055174 3300025961 Bacteria 2793
60 Ga0207668_10016486 3300025972 Bacteria 4612
61 Ga0207668_10124703 3300025972 Unclassified 1956
62 Ga0207658_10075453 3300025986 Bacteria 2565
63 Ga0207677_10014294 3300026023 Bacteria 4631
64 Ga0207641_10044315 3300026088 Bacteria 3741
65 Ga0207648_10024163 3300026089 Bacteria 5430
66 Ga0207676_10034680 3300026095 Bacteria 3822
67 Ga0207683_10012816 3300026121 Bacteria 7156
68 Ga0268264_10017599 3300028381 Bacteria 5853
69 Ga0268264_10151803 3300028381 Bacteria 2077
70 Ga0265327_10000298 3300031251 Bacteria 96149
71 Ga0307412_10000215 3300031911 Bacteria 39239
72 Ga0307412_10011869 3300031911 Bacteria 5059
73 Ga0307416_100000016 3300032002 Bacteria 205465
74 Ga0307414_10000224 3300032004 Bacteria 37374
75 Ga0307414_10001937 3300032004 Bacteria 10711
76 Ga0307414_10132563 3300032004 Bacteria 1937
77 Ga0395905_0000051 3300037471 Bacteria 223416
78 Ga0439465_0000003 3300041413 Bacteria 72076
79 Ga0451577_0149501 3300042876 Bacteria 2101
80 Ga0453684_0021049 3300044712 Bacteria 9776
81 Ga0453684_0063449 3300044712 Bacteria 4725
82 Ga0466959_0023333 3300045049 Bacteria 4578
83 Ga0495627_000030 3300046453 Bacteria 228883
84 Ga0495606_0004789 3300046507 Bacteria 13302
85 Ga0495606_0007660 3300046507 Bacteria 9577
86 Ga0495610_0000036 3300046512 Bacteria 186904
87 Ga0495632_0002228 3300046519 Bacteria 14958
88 Ga0495663_0000014 3300046525 Bacteria 149657
89 Ga0495654_0000142 3300046530 Bacteria 74610
90 Ga0495609_0000137 3300046538 Bacteria 77538
91 Ga0495633_0000001 3300046558 Bacteria 801972
92 Ga0495633_0001869 3300046558 Bacteria 15433
93 Ga0495625_0000818 3300046660 Bacteria 42880
94 Ga0495686_0000327 3300047472 Bacteria 78430
95 Ga0495686_0000955 3300047472 Bacteria 35740
96 Ga0496116_0000068 3300048919 Bacteria 259724
97 Ga0496117_0000062 3300048920 Bacteria 257535
98 Ga0496118_0000113 3300048921 Bacteria 150726
99 Ga0496119_0000024 3300048922 Bacteria 257750
100 Ga0496121_0000020 3300048924 Bacteria 498732
101 Ga0496121_0052423 3300048924 Bacteria 3427
102 Ga0496122_0000245 3300048925 Bacteria 121737
103 Ga0496122_0000530 3300048925 Bacteria 79156
104 Ga0496122_0000666 3300048925 Bacteria 69147
105 Ga0496122_0002619 3300048925 Bacteria 25205
106 Ga0496122_0003993 3300048925 Bacteria 18811
107 Ga0496123_0000474 3300048926 Bacteria 69869
108 Ga0496123_0006331 3300048926 Bacteria 11497
109 Ga0496123_0013299 3300048926 Bacteria 6928
110 Ga0496124_0002620 3300048927 Bacteria 23177
111 Ga0496125_0000454 3300048928 Bacteria 73947
112 Ga0496125_0008307 3300048928 Bacteria 10902
113 Ga0496125_0023347 3300048928 Bacteria 5711
114 Ga0496126_0000957 3300048929 Bacteria 49532
115 Ga0501241_000004 3300049758 Bacteria 177326
116 Ga0501269_000256 3300049766 Bacteria 15195

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025942 Ga0207689_10174079 Ga0207689_101740791 406
2 3300025899 Ga0207642_10086597 Ga0207642_100865972 414
3 3300042876 Ga0451577_0149501 Ga0451577_0149501_808_2067 418
4 3300048925 Ga0496122_0000530 Ga0496122_0000530_50596_52113 482
5 3300013308 Ga0157375_10000334 Ga0157375_1000033413 491
6 3300048928 Ga0496125_0023347 Ga0496125_0023347_2052_3584 491
7 3300005334 Ga0068869_100033023 Ga0068869_1000330232 493
8 3300005347 Ga0070668_100047370 Ga0070668_1000473702 493
9 3300005844 Ga0068862_100059604 Ga0068862_1000596042 493
10 3300025942 Ga0207689_10021338 Ga0207689_100213382 493
11 3300017792 Ga0163161_10038188 Ga0163161_100381883 495
12 3300044712 Ga0453684_0021049 Ga0453684_0021049_335_1825 495
13 3300044712 Ga0453684_0063449 Ga0453684_0063449_335_1825 495
14 iso_pu_bacteria 2821136567 2821137012 497
15 iso_pu_bacteria 2904467357 2904468246 497
16 iso_pu_bacteria 2965320100 2965322533 499
17 3300005334 Ga0068869_100031852 Ga0068869_1000318523 500
18 3300005367 Ga0070667_100146769 Ga0070667_1001467692 500
19 3300005456 Ga0070678_100087826 Ga0070678_1000878262 500
20 3300005548 Ga0070665_100038752 Ga0070665_1000387522 500
21 3300005719 Ga0068861_100044964 Ga0068861_1000449642 500
22 3300005843 Ga0068860_100048035 Ga0068860_1000480352 500
23 3300009176 Ga0105242_10014637 Ga0105242_100146372 500
24 3300009553 Ga0105249_10053190 Ga0105249_100531902 500
25 3300025903 Ga0207680_10012441 Ga0207680_100124412 500
26 3300025907 Ga0207645_10000496 Ga0207645_1000049631 500
27 3300025908 Ga0207643_10044255 Ga0207643_100442552 500
28 3300025940 Ga0207691_10014972 Ga0207691_100149722 500
29 3300025942 Ga0207689_10005978 Ga0207689_100059787 500
30 3300025961 Ga0207712_10055174 Ga0207712_100551742 500
31 3300025972 Ga0207668_10124703 Ga0207668_101247032 500
32 3300026089 Ga0207648_10024163 Ga0207648_100241633 500
33 3300026121 Ga0207683_10012816 Ga0207683_100128163 500
34 3300028381 Ga0268264_10151803 Ga0268264_101518032 500
35 iso_pu_bacteria 2818991460 2819680819 500
36 iso_pu_bacteria 2929177148 2929178852 500
37 iso_pu_bacteria 2945977869 2945981256 500
38 iso_pu_bacteria 2946013367 2946019343 500
39 3300005289 Ga0065704_10071263 Ga0065704_1007126310 501
40 3300009092 Ga0105250_10018414 Ga0105250_100184141 501
41 3300013102 Ga0157371_10093369 Ga0157371_100933692 501
42 3300013104 Ga0157370_10135374 Ga0157370_101353741 501
43 3300014497 Ga0182008_10000036 Ga0182008_1000003655 501
44 3300032004 Ga0307414_10000224 Ga0307414_1000022410 501
45 3300046525 Ga0495663_0000014 Ga0495663_0000014_119335_120849 501
46 3300048924 Ga0496121_0000020 Ga0496121_0000020_444804_446312 501
47 iso_pu_bacteria 2585428045 2587680331 501
48 iso_pu_bacteria 2588254255 2590604014 501
49 iso_pu_bacteria 2751185877 2753674767 501
50 iso_pu_bacteria 2772190705 2772606172 501
51 3300003322 rootL2_10098668 rootL2_100986682 502
52 3300005331 Ga0070670_100042565 Ga0070670_1000425652 502
53 3300005338 Ga0068868_100020243 Ga0068868_1000202432 502
54 3300005355 Ga0070671_100102074 Ga0070671_1001020742 502
55 3300005367 Ga0070667_100003107 Ga0070667_1000031074 502
56 3300005841 Ga0068863_100011948 Ga0068863_1000119486 502
57 3300005843 Ga0068860_100009371 Ga0068860_1000093712 502
58 3300013296 Ga0157374_10027367 Ga0157374_100273673 502
59 3300013297 Ga0157378_10005955 Ga0157378_100059552 502
60 3300013297 Ga0157378_10011173 Ga0157378_100111735 502
61 3300025986 Ga0207658_10075453 Ga0207658_100754532 502
62 3300026023 Ga0207677_10014294 Ga0207677_100142942 502
63 3300026088 Ga0207641_10044315 Ga0207641_100443152 502
64 3300026095 Ga0207676_10034680 Ga0207676_100346802 502
65 3300028381 Ga0268264_10017599 Ga0268264_100175992 502
66 3300037471 Ga0395905_0000051 Ga0395905_0000051_55095_56612 502
67 3300031251 Ga0265327_10000298 Ga0265327_1000029888 503
68 3300003320 rootH2_10050665 rootH2_100506652 504
69 3300003323 rootH1_10016087 rootH1_100160873 504
70 3300013102 Ga0157371_10124604 Ga0157371_101246042 504
71 3300025208 Ga0209436_101488 Ga0209436_1014882 504
72 3300025284 Ga0209130_1000665 Ga0209130_100066515 504
73 3300025302 Ga0207426_1000051 Ga0207426_1000051282 504
74 iso_pu_bacteria 2511231000 2511233481 504
75 iso_pu_bacteria 2582581278 2585141934 504
76 iso_pu_bacteria 2582581281 2585157766 504
77 iso_pu_bacteria 2582581282 2585162101 504
78 iso_pu_bacteria 2582581873 2585426370 504
79 iso_pu_bacteria 2585428060 2587747414 504
80 iso_pu_bacteria 2585428061 2587752797 504
81 iso_pu_bacteria 2585428095 2587866444 504
82 iso_pu_bacteria 2585428115 2587944746 504
83 iso_pu_bacteria 2585428182 2588212033 504
84 iso_pu_bacteria 2585428183 2588216303 504
85 iso_pu_bacteria 2585428184 2588221127 504
86 iso_pu_bacteria 2585428185 2588225577 504
87 iso_pu_bacteria 2585428187 2588231955 504
88 iso_pu_bacteria 2588253712 2588448084 504
89 iso_pu_bacteria 2588254257 2590609363 504
90 iso_pu_bacteria 2728369107 2729203090 504
91 iso_pu_bacteria 2739367874 2740059645 504
92 iso_pu_bacteria 2765235839 2765574824 504
93 iso_pu_bacteria 2775506739 2775675033 504
94 iso_pu_bacteria 2816332188 2816876109 504
95 iso_pu_bacteria 2842083920 2842087088 504
96 iso_pu_bacteria 2871720351 2871721570 504
97 iso_pu_bacteria 2889290771 2889294623 504
98 iso_pu_bacteria 2905999023 2906002736 504
99 iso_pu_bacteria 2919097161 2919100291 504
100 iso_pu_bacteria 2919399522 2919402080 504
101 iso_pu_bacteria 2945924605 2945925506 504
102 iso_pu_bacteria 2946019816 2946023284 504
103 iso_pu_bacteria 2977243572 2977244342 504
104 iso_pu_bacteria 2984572630 2984573766 504
105 iso_pu_bacteria 2984606641 2984607206 504
106 iso_pu_bacteria 2993372514 2993375811 504
107 iso_pu_bacteria 2993480792 2993482673 504
108 iso_pu_bacteria 8036736890 8036736922 504
109 3300005289 Ga0065704_10070819 Ga0065704_100708199 505
110 3300005347 Ga0070668_100055532 Ga0070668_1000555322 505
111 3300025935 Ga0207709_10000216 Ga0207709_1000021630 505
112 3300025972 Ga0207668_10016486 Ga0207668_100164864 505
113 3300045049 Ga0466959_0023333 Ga0466959_0023333_613_2133 505
114 3300048925 Ga0496122_0000245 Ga0496122_0000245_68071_69588 505
115 3300048926 Ga0496123_0006331 Ga0496123_0006331_261_1778 505
116 3300032004 Ga0307414_10001937 Ga0307414_100019375 506
117 3300001915 JGI24741J21665_1002214 JGI24741J21665_10022144 508
118 3300003323 rootH1_10078422 rootH1_100784224 508
119 3300005288 Ga0065714_10064456 Ga0065714_1006445616 508
120 3300005329 Ga0070683_100001467 Ga0070683_10000146711 508
121 3300005337 Ga0070682_100000133 Ga0070682_10000013345 508
122 3300009036 Ga0105244_10000013 Ga0105244_1000001345 508
123 3300013100 Ga0157373_10000017 Ga0157373_10000017116 508
124 3300013102 Ga0157371_10075859 Ga0157371_100758592 508
125 3300013104 Ga0157370_10004398 Ga0157370_1000439811 508
126 3300013105 Ga0157369_10000136 Ga0157369_1000013668 508
127 3300015261 Ga0182006_1000001 Ga0182006_100000146 508
128 3300025291 Ga0209675_1000034 Ga0209675_1000034198 508
129 3300025728 Ga0207655_1000031 Ga0207655_100003145 508
130 3300031911 Ga0307412_10000215 Ga0307412_1000021521 508
131 3300031911 Ga0307412_10011869 Ga0307412_100118694 508
132 3300032002 Ga0307416_100000016 Ga0307416_100000016143 508
133 3300032004 Ga0307414_10132563 Ga0307414_101325631 508
134 3300041413 Ga0439465_0000003 Ga0439465_0000003_20798_22342 508
135 3300046453 Ga0495627_000030 Ga0495627_000030_53489_55033 508
136 3300046507 Ga0495606_0004789 Ga0495606_0004789_11018_12556 508
137 3300046507 Ga0495606_0007660 Ga0495606_0007660_2372_3901 508
138 3300046512 Ga0495610_0000036 Ga0495610_0000036_136303_137838 508
139 3300046519 Ga0495632_0002228 Ga0495632_0002228_640_2181 508
140 3300046530 Ga0495654_0000142 Ga0495654_0000142_57251_58795 508
141 3300046538 Ga0495609_0000137 Ga0495609_0000137_54686_56221 508
142 3300046558 Ga0495633_0000001 Ga0495633_0000001_53307_54845 508
143 3300046558 Ga0495633_0001869 Ga0495633_0001869_2779_4320 508
144 3300046660 Ga0495625_0000818 Ga0495625_0000818_18004_19545 508
145 3300047472 Ga0495686_0000327 Ga0495686_0000327_19827_21365 508
146 3300047472 Ga0495686_0000955 Ga0495686_0000955_1773_3317 508
147 3300048919 Ga0496116_0000068 Ga0496116_0000068_210322_211848 508
148 3300048920 Ga0496117_0000062 Ga0496117_0000062_208257_209783 508
149 3300048921 Ga0496118_0000113 Ga0496118_0000113_119383_120909 508
150 3300048922 Ga0496119_0000024 Ga0496119_0000024_208268_209794 508
151 3300048924 Ga0496121_0052423 Ga0496121_0052423_1103_2629 508
152 3300048925 Ga0496122_0000666 Ga0496122_0000666_5325_6860 508
153 3300048925 Ga0496122_0002619 Ga0496122_0002619_18634_20160 508
154 3300048925 Ga0496122_0003993 Ga0496122_0003993_12258_13784 508
155 3300048926 Ga0496123_0000474 Ga0496123_0000474_20583_22109 508
156 3300048926 Ga0496123_0013299 Ga0496123_0013299_4430_5956 508
157 3300048927 Ga0496124_0002620 Ga0496124_0002620_10463_11989 508
158 3300048928 Ga0496125_0000454 Ga0496125_0000454_27008_28534 508
159 3300048928 Ga0496125_0008307 Ga0496125_0008307_4349_5875 508
160 3300048929 Ga0496126_0000957 Ga0496126_0000957_5014_6540 508
161 3300049758 Ga0501241_000004 Ga0501241_000004_120302_121831 508
162 3300049766 Ga0501269_000256 Ga0501269_000256_6038_7582 508

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

50

117

0.98

PF00890

FAD_binding_2

FAD binding domain

47

88

0.95

PF01494

FAD_binding_3

FAD binding domain

45

84

0.93

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

55

404

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ajj-assembly3.cif.gz_B-2 crystal structure of the disulfide reductase mera from staphylococcus aureus 0.9433 5 39
4zn0-assembly2.cif.gz_B structure of the nadph-dependent thioredoxin reductase from methanosarcina mazei 0.9342 3 37
3itj-assembly1.cif.gz_D-2 crystal structure of saccharomyces cerevisiae thioredoxin reductase 1 (trr1) 0.918 4 34
3ado-assembly1.cif.gz_A crystal structure of the rabbit l-gulonate 3-dehydrogenase 0.9172 6 37
7o1g-assembly1.cif.gz_A-2 structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme alpha-e141a-h462a, beta-c92a mutant 0.9162 5 36
ID Description Score Start End Superfamily
4zn0A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9817 4 36 3.50.50.60
2ivdA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.969 6 41 3.50.50.60
4i58A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9683 5 40 3.50.50.60
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.968 6 34 3.50.50.60
4dnaB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9621 6 39 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A381FM68-F1-model_v4 Protoporphyrinogen oxidase 0.988 1 344 GO:0005092
GO:0007264
AF-A0A7K3MXR8-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9813 1 443
AF-A0A2K1E300-F1-model_v4 All-trans-retinol 13,14-reductase 0.9801 1 504
AF-A0A1M3GHP9-F1-model_v4 deleted 0.9793 3 501
AF-L1PPM2-F1-model_v4 FAD dependent oxidoreductase 0.9793 3 399 GO:0016491

Feature Viewer

pLDDT pTM Quality
90.06 0.9 High
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Predicted Structure (AlphaFold2)

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