F237568

General Info

Members Datasets Scaffolds Average Seq Length
161 78 153 363

Family's Representative Sequence

Representative Sequence 3300044673|Ga0453683_0005212|Ga0453683_0005212_4249_5424
Length 391
Sequence MRPSASVLRGDARETHFPSCRFAIMHESMKFESLVKPAVLTQPVYEPGKPIEYVARELGLDPATIIKLASNENPFGPSPKAVAAAKHALEHGELYPDGGCYELREKLAKARGLGADQFVIGNGSNEIIELVGHALLGPGDEVVMGMPAFVVYKLVTLVFGAKAVEIPLTNFRHDLKAMAAAITPRTKLVYVCTPNNPTGTANTEEELLAFARALPEHVVCVFDEAYAEFVDPAPDLRPLIREGRNVICLRTFSKIYGLASLRIGYGYANPTTISLLNRVRQPFNVNAIAQAAAIAALDDRDFAARCARENRSGLRQLESAFAELGLPFVPSVANFVLVRVGDGMRVFDTLQRRGVIVRPMKSYGMPEWVRVTVGTREQNERLLKELAASLA

Samples

Sample ID Description Type Environment
1 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
2 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
3 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
4 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
5 2854911287 Brucella lupini LUP21 Isolate Unclassified
6 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
7 2901300506 Cupriavidus sp. UYMSc13B Isolate Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
15 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
22 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
23 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
24 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
25 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
26 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
27 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
28 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
29 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
30 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
31 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
32 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
33 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
34 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
35 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
36 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
37 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
41 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
42 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
43 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
44 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
47 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
52 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
53 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
70 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
71 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
72 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
73 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
75 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
76 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
77 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
78 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.03
Metatranscriptomes 0
Isolates 4.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.62
Nodule 2.48
Rhizoplane 0
Rhizosphere 91.93
Stem 0
Stem Tuber 0
Unclassified 4.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10013250 3300003320 Bacteria 24189
2 rootH2_10015985 3300003320 Bacteria 13089
3 Ga0068868_100053155 3300005338 Bacteria 3191
4 Ga0070674_100054387 3300005356 Bacteria 2769
5 Ga0070679_100008022 3300005530 Bacteria 9918
6 Ga0068856_100017186 3300005614 Bacteria 7009
7 Ga0114129_10219467 3300009147 Bacteria 2566
8 Ga0163163_10255544 3300014325 Bacteria 1803
9 Ga0207652_10007701 3300025921 Bacteria 8657
10 Ga0207700_10066694 3300025928 Unclassified 2752
11 Ga0207661_10005459 3300025944 Bacteria 8964
12 Ga0207677_10040154 3300026023 Bacteria 3082
13 Ga0207702_10002373 3300026078 Bacteria 17984
14 Ga0207702_10150170 3300026078 Bacteria 2119
15 Ga0207674_10019446 3300026116 Bacteria 7354
16 Ga0265337_1002380 3300028556 Bacteria 8681
17 Ga0265337_1003499 3300028556 Bacteria 6787
18 Ga0265337_1012448 3300028556 Bacteria 2891
19 Ga0265337_1013826 3300028556 Bacteria 2694
20 Ga0265326_10028591 3300028558 Bacteria 1588
21 Ga0265319_1000167 3300028563 Bacteria 50090
22 Ga0265319_1000420 3300028563 Bacteria 30501
23 Ga0265319_1003714 3300028563 Bacteria 7849
24 Ga0265319_1007152 3300028563 Bacteria 5059
25 Ga0265319_1010289 3300028563 Bacteria 3911
26 Ga0265319_1014464 3300028563 Bacteria 3095
27 Ga0265319_1016991 3300028563 Bacteria 2779
28 Ga0265319_1027967 3300028563 Unclassified 1993
29 Ga0265319_1034800 3300028563 Unclassified 1731
30 Ga0265319_1035878 3300028563 Unclassified 1699
31 Ga0265319_1056860 3300028563 Bacteria 1277
32 Ga0265334_10000567 3300028573 Bacteria 18795
33 Ga0265334_10005303 3300028573 Bacteria 5638
34 Ga0265318_10000016 3300028577 Bacteria 184782
35 Ga0265318_10000870 3300028577 Bacteria 19790
36 Ga0265318_10002048 3300028577 Bacteria 11109
37 Ga0265318_10024518 3300028577 Bacteria 2391
38 Ga0265318_10049929 3300028577 Bacteria 1573
39 Ga0265323_10014106 3300028653 Bacteria 3173
40 Ga0265322_10000617 3300028654 Bacteria 13398
41 Ga0265322_10018690 3300028654 Bacteria 1991
42 Ga0265336_10001807 3300028666 Bacteria 9348
43 Ga0307515_10125317 3300028794 Bacteria 2875
44 Ga0265338_10000779 3300028800 Bacteria 54205
45 Ga0265338_10003384 3300028800 Bacteria 22517
46 Ga0265338_10195727 3300028800 Bacteria 1528
47 Ga0265324_10000192 3300029957 Bacteria 46986
48 Ga0265324_10002624 3300029957 Bacteria 9015
49 Ga0265324_10014245 3300029957 Bacteria 2946
50 Ga0265324_10022387 3300029957 Bacteria 2259
51 Ga0265324_10066475 3300029957 Unclassified 1230
52 Ga0265332_10009237 3300031238 Bacteria 4406
53 Ga0265320_10000009 3300031240 Bacteria 255096
54 Ga0265320_10000752 3300031240 Bacteria 24879
55 Ga0265320_10001157 3300031240 Bacteria 19393
56 Ga0265320_10001530 3300031240 Bacteria 16753
57 Ga0265320_10003459 3300031240 Bacteria 10593
58 Ga0265320_10006220 3300031240 Bacteria 7545
59 Ga0265320_10007233 3300031240 Bacteria 6910
60 Ga0265320_10008707 3300031240 Bacteria 6183
61 Ga0265320_10010248 3300031240 Bacteria 5591
62 Ga0265320_10015998 3300031240 Bacteria 4219
63 Ga0265320_10040351 3300031240 Bacteria 2328
64 Ga0265325_10006714 3300031241 Bacteria 6962
65 Ga0265340_10006677 3300031247 Bacteria 6322
66 Ga0265339_10019938 3300031249 Bacteria 3926
67 Ga0265331_10003056 3300031250 Bacteria 10983
68 Ga0265331_10020062 3300031250 Bacteria 3438
69 Ga0265327_10000417 3300031251 Bacteria 77684
70 Ga0265327_10000823 3300031251 Bacteria 46766
71 Ga0265327_10001067 3300031251 Bacteria 38215
72 Ga0265327_10006342 3300031251 Bacteria 9491
73 Ga0265327_10024162 3300031251 Bacteria 3577
74 Ga0265327_10033447 3300031251 Bacteria 2864
75 Ga0265327_10046332 3300031251 Bacteria 2303
76 Ga0265316_10005001 3300031344 Bacteria 13017
77 Ga0265316_10014404 3300031344 Bacteria 6963
78 Ga0265316_10026968 3300031344 Bacteria 4768
79 Ga0265316_10069582 3300031344 Bacteria 2716
80 Ga0307408_100000003 3300031548 Bacteria 618438
81 Ga0265313_10000478 3300031595 Bacteria 41923
82 Ga0265313_10000959 3300031595 Bacteria 28638
83 Ga0265313_10001043 3300031595 Bacteria 26985
84 Ga0265313_10001689 3300031595 Bacteria 20394
85 Ga0265313_10001969 3300031595 Bacteria 18573
86 Ga0265313_10006865 3300031595 Bacteria 7933
87 Ga0265313_10018214 3300031595 Bacteria 3952
88 Ga0307508_10000112 3300031616 Bacteria 95874
89 Ga0265314_10000717 3300031711 Bacteria 40082
90 Ga0265314_10005140 3300031711 Bacteria 11898
91 Ga0265314_10010336 3300031711 Bacteria 7795
92 Ga0265314_10033364 3300031711 Bacteria 3776
93 Ga0265314_10109537 3300031711 Bacteria 1757
94 Ga0265342_10001630 3300031712 Bacteria 20698
95 Ga0265342_10003801 3300031712 Bacteria 12157
96 Ga0265342_10013475 3300031712 Bacteria 5482
97 Ga0265342_10038263 3300031712 Bacteria 2922
98 Ga0265342_10081647 3300031712 Unclassified 1866
99 Ga0307410_10001221 3300031852 Bacteria 11417
100 Ga0307407_10011188 3300031903 Bacteria 4259
101 Ga0307412_10047296 3300031911 Bacteria 2825
102 Ga0307409_100000029 3300031995 Bacteria 50291
103 Ga0307416_100000070 3300032002 Bacteria 83644
104 Ga0307414_10406355 3300032004 Bacteria 1184
105 Ga0373933_0051729 3300035724 Bacteria 2456
106 Ga0451577_0002047 3300042876 Bacteria 24964
107 Ga0453683_0005212 3300044673 Bacteria 9103
108 Ga0466966_0026867 3300044684 Bacteria 3755
109 Ga0466961_0028896 3300044693 Bacteria 3565
110 Ga0453684_0000045 3300044712 Bacteria 582917
111 Ga0453684_0004753 3300044712 Bacteria 28044
112 Ga0453684_0026034 3300044712 Bacteria 8467
113 Ga0453684_0069335 3300044712 Bacteria 4473
114 Ga0453684_0111071 3300044712 Bacteria 3331
115 Ga0453684_0244477 3300044712 Bacteria 2064
116 Ga0451576_0000807 3300045051 Bacteria 61371
117 Ga0451576_0002243 3300045051 Bacteria 29638
118 Ga0451576_0015232 3300045051 Bacteria 8525
119 Ga0451576_0059060 3300045051 Bacteria 4005
120 Ga0451576_0065450 3300045051 Bacteria 3785
121 Ga0501032_0000250 3300049569 Bacteria 44943
122 Ga0501032_0003023 3300049569 Bacteria 13041
123 Ga0501033_0005460 3300049570 Bacteria 10070
124 Ga0501033_0006245 3300049570 Bacteria 9338
125 Ga0501034_0043669 3300049571 Bacteria 4535
126 Ga0501036_0020655 3300049572 Bacteria 5531
127 Ga0501037_0007709 3300049573 Bacteria 7880
128 Ga0501038_0021091 3300049574 Bacteria 5852
129 Ga0501039_0140875 3300049575 Unclassified 1894
130 Ga0501043_0019993 3300049579 Bacteria 5255
131 Ga0501043_0082651 3300049579 Bacteria 2524
132 Ga0501046_0001063 3300049580 Bacteria 26899
133 Ga0501046_0029498 3300049580 Bacteria 4459
134 Ga0501047_0018169 3300049581 Bacteria 6738
135 Ga0501047_0052542 3300049581 Bacteria 3939
136 Ga0501048_0085425 3300049582 Bacteria 2225
137 Ga0501048_0116832 3300049582 Bacteria 1884
138 Ga0501070_0105486 3300049586 Bacteria 2330
139 Ga0501070_0322612 3300049586 Unclassified 1256
140 Ga0501077_0002024 3300049593 Bacteria 12237
141 Ga0501080_0049684 3300049742 Bacteria 3904
142 Ga0501080_0063981 3300049742 Bacteria 3423
143 Ga0501083_0006169 3300049744 Bacteria 8502
144 Ga0501083_0015638 3300049744 Bacteria 5311
145 Ga0501035_0000309 3300049822 Bacteria 56854
146 Ga0501035_0036216 3300049822 Bacteria 4473
147 Ga0501035_0093352 3300049822 Bacteria 2647
148 Ga0501044_0000310 3300049823 Bacteria 61455
149 Ga0501044_0001980 3300049823 Bacteria 23675
150 Ga0501044_0056524 3300049823 Bacteria 4029
151 nmdc:mga0n895_94050_c1 3300050512 Unclassified 3001
152 Ga0500622_0071768 3300053156 Bacteria 1749
153 Ga0501082_0239438 3300060353 Unclassified 1579

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014325 Ga0163163_10255544 Ga0163163_102555442 316
2 3300005338 Ga0068868_100053155 Ga0068868_1000531552 321
3 3300026023 Ga0207677_10040154 Ga0207677_100401542 321
4 3300029957 Ga0265324_10022387 Ga0265324_100223872 321
5 3300028558 Ga0265326_10028591 Ga0265326_100285912 322
6 3300028573 Ga0265334_10000567 Ga0265334_1000056717 322
7 3300028577 Ga0265318_10000016 Ga0265318_10000016120 322
8 3300031595 Ga0265313_10001043 Ga0265313_1000104331 322
9 3300031711 Ga0265314_10005140 Ga0265314_1000514010 322
10 iso_pu_bacteria 2882456835 2882463330 323
11 iso_pu_bacteria 2513237150 2513957951 324
12 iso_pu_bacteria 2513237165 2514045974 324
13 iso_pu_bacteria 644736347 644749855 331
14 iso_pu_bacteria 2508501114 2509076053 342
15 iso_pu_bacteria 2854911287 2854915974 342
16 iso_pu_bacteria 2901300506 2901309385 342
17 3300031240 Ga0265320_10007233 Ga0265320_100072332 347
18 3300009147 Ga0114129_10219467 Ga0114129_102194673 348
19 3300031251 Ga0265327_10001067 Ga0265327_1000106725 352
20 3300049822 Ga0501035_0036216 Ga0501035_0036216_1635_2693 352
21 3300053156 Ga0500622_0071768 Ga0500622_0071768_55_1149 352
22 3300031251 Ga0265327_10000417 Ga0265327_1000041720 353
23 3300031251 Ga0265327_10033447 Ga0265327_100334472 353
24 3300028563 Ga0265319_1016991 Ga0265319_10169911 354
25 3300031344 Ga0265316_10026968 Ga0265316_100269683 356
26 3300028556 Ga0265337_1012448 Ga0265337_10124482 357
27 3300028563 Ga0265319_1035878 Ga0265319_10358782 357
28 3300044712 Ga0453684_0000045 Ga0453684_0000045_120736_121818 360
29 3300005356 Ga0070674_100054387 Ga0070674_1000543872 362
30 3300005530 Ga0070679_100008022 Ga0070679_1000080223 362
31 3300025921 Ga0207652_10007701 Ga0207652_100077019 362
32 3300025944 Ga0207661_10005459 Ga0207661_100054599 362
33 3300026078 Ga0207702_10150170 Ga0207702_101501703 362
34 3300028653 Ga0265323_10014106 Ga0265323_100141062 362
35 3300028654 Ga0265322_10000617 Ga0265322_100006176 362
36 3300029957 Ga0265324_10014245 Ga0265324_100142452 362
37 3300031595 Ga0265313_10006865 Ga0265313_100068657 362
38 3300031711 Ga0265314_10010336 Ga0265314_100103364 362
39 3300031712 Ga0265342_10001630 Ga0265342_100016302 362
40 3300044712 Ga0453684_0026034 Ga0453684_0026034_4179_5267 362
41 3300045051 Ga0451576_0065450 Ga0451576_0065450_1420_2508 362
42 3300049570 Ga0501033_0006245 Ga0501033_0006245_1326_2414 362
43 3300049573 Ga0501037_0007709 Ga0501037_0007709_3185_4273 362
44 3300049580 Ga0501046_0001063 Ga0501046_0001063_6099_7187 362
45 3300049581 Ga0501047_0052542 Ga0501047_0052542_2790_3878 362
46 3300049582 Ga0501048_0116832 Ga0501048_0116832_299_1387 362
47 3300049586 Ga0501070_0105486 Ga0501070_0105486_941_2029 362
48 3300049593 Ga0501077_0002024 Ga0501077_0002024_3310_4461 362
49 3300049742 Ga0501080_0063981 Ga0501080_0063981_915_2003 362
50 3300049823 Ga0501044_0056524 Ga0501044_0056524_1392_2480 362
51 3300050512 nmdc:mga0n895_94050_c1 nmdc:mga0n895_94050_c1_1469_2602 362
52 iso_pu_bacteria 2786546940 2788433404 362
53 3300028556 Ga0265337_1002380 Ga0265337_10023804 363
54 3300028556 Ga0265337_1003499 Ga0265337_10034992 363
55 3300028556 Ga0265337_1013826 Ga0265337_10138262 363
56 3300028563 Ga0265319_1003714 Ga0265319_10037142 363
57 3300028563 Ga0265319_1007152 Ga0265319_10071524 363
58 3300028563 Ga0265319_1027967 Ga0265319_10279672 363
59 3300028563 Ga0265319_1056860 Ga0265319_10568601 363
60 3300028573 Ga0265334_10005303 Ga0265334_100053036 363
61 3300028577 Ga0265318_10000870 Ga0265318_100008708 363
62 3300028577 Ga0265318_10049929 Ga0265318_100499292 363
63 3300028654 Ga0265322_10018690 Ga0265322_100186902 363
64 3300028666 Ga0265336_10001807 Ga0265336_100018079 363
65 3300028800 Ga0265338_10000779 Ga0265338_1000077941 363
66 3300028800 Ga0265338_10003384 Ga0265338_1000338418 363
67 3300028800 Ga0265338_10195727 Ga0265338_101957272 363
68 3300029957 Ga0265324_10000192 Ga0265324_1000019229 363
69 3300029957 Ga0265324_10002624 Ga0265324_100026247 363
70 3300031238 Ga0265332_10009237 Ga0265332_100092374 363
71 3300031240 Ga0265320_10000752 Ga0265320_1000075217 363
72 3300031240 Ga0265320_10001530 Ga0265320_1000153017 363
73 3300031240 Ga0265320_10006220 Ga0265320_100062205 363
74 3300031240 Ga0265320_10008707 Ga0265320_100087072 363
75 3300031240 Ga0265320_10010248 Ga0265320_100102484 363
76 3300031240 Ga0265320_10040351 Ga0265320_100403512 363
77 3300031241 Ga0265325_10006714 Ga0265325_100067147 363
78 3300031247 Ga0265340_10006677 Ga0265340_100066774 363
79 3300031249 Ga0265339_10019938 Ga0265339_100199384 363
80 3300031251 Ga0265327_10000823 Ga0265327_1000082317 363
81 3300031251 Ga0265327_10024162 Ga0265327_100241622 363
82 3300031344 Ga0265316_10005001 Ga0265316_100050019 363
83 3300031344 Ga0265316_10014404 Ga0265316_100144047 363
84 3300031344 Ga0265316_10069582 Ga0265316_100695822 363
85 3300031595 Ga0265313_10001689 Ga0265313_1000168917 363
86 3300031595 Ga0265313_10001969 Ga0265313_100019693 363
87 3300031711 Ga0265314_10000717 Ga0265314_1000071721 363
88 3300031711 Ga0265314_10109537 Ga0265314_101095371 363
89 3300031712 Ga0265342_10003801 Ga0265342_100038017 363
90 3300031712 Ga0265342_10013475 Ga0265342_100134753 363
91 3300035724 Ga0373933_0051729 Ga0373933_0051729_1337_2428 363
92 3300044673 Ga0453683_0005212 Ga0453683_0005212_4249_5424 363
93 3300044712 Ga0453684_0069335 Ga0453684_0069335_2565_3656 363
94 3300045051 Ga0451576_0015232 Ga0451576_0015232_6916_8019 363
95 3300045051 Ga0451576_0059060 Ga0451576_0059060_793_1884 363
96 3300049580 Ga0501046_0029498 Ga0501046_0029498_739_1842 363
97 3300049581 Ga0501047_0018169 Ga0501047_0018169_910_2013 363
98 3300049744 Ga0501083_0006169 Ga0501083_0006169_2904_3995 363
99 3300049744 Ga0501083_0015638 Ga0501083_0015638_1200_2348 363
100 3300060353 Ga0501082_0239438 Ga0501082_0239438_79_1170 363
101 3300003320 rootH2_10013250 rootH2_100132505 364
102 3300003320 rootH2_10015985 rootH2_1001598512 364
103 3300005614 Ga0068856_100017186 Ga0068856_1000171865 364
104 3300025928 Ga0207700_10066694 Ga0207700_100666942 364
105 3300026078 Ga0207702_10002373 Ga0207702_1000237312 364
106 3300026116 Ga0207674_10019446 Ga0207674_100194462 364
107 3300028563 Ga0265319_1000167 Ga0265319_100016726 364
108 3300028563 Ga0265319_1000420 Ga0265319_100042032 364
109 3300028563 Ga0265319_1010289 Ga0265319_10102895 364
110 3300028563 Ga0265319_1014464 Ga0265319_10144643 364
111 3300028563 Ga0265319_1034800 Ga0265319_10348002 364
112 3300028577 Ga0265318_10002048 Ga0265318_100020482 364
113 3300028577 Ga0265318_10024518 Ga0265318_100245182 364
114 3300028794 Ga0307515_10125317 Ga0307515_101253172 364
115 3300029957 Ga0265324_10066475 Ga0265324_100664751 364
116 3300031240 Ga0265320_10000009 Ga0265320_10000009101 364
117 3300031240 Ga0265320_10001157 Ga0265320_100011573 364
118 3300031240 Ga0265320_10003459 Ga0265320_100034592 364
119 3300031240 Ga0265320_10015998 Ga0265320_100159982 364
120 3300031250 Ga0265331_10003056 Ga0265331_100030566 364
121 3300031250 Ga0265331_10020062 Ga0265331_100200622 364
122 3300031251 Ga0265327_10006342 Ga0265327_100063425 364
123 3300031251 Ga0265327_10046332 Ga0265327_100463322 364
124 3300031548 Ga0307408_100000003 Ga0307408_100000003558 364
125 3300031595 Ga0265313_10000478 Ga0265313_1000047825 364
126 3300031595 Ga0265313_10000959 Ga0265313_1000095914 364
127 3300031595 Ga0265313_10018214 Ga0265313_100182145 364
128 3300031616 Ga0307508_10000112 Ga0307508_1000011244 364
129 3300031711 Ga0265314_10033364 Ga0265314_100333642 364
130 3300031712 Ga0265342_10038263 Ga0265342_100382633 364
131 3300031712 Ga0265342_10081647 Ga0265342_100816471 364
132 3300031852 Ga0307410_10001221 Ga0307410_100012212 364
133 3300031903 Ga0307407_10011188 Ga0307407_100111883 364
134 3300031911 Ga0307412_10047296 Ga0307412_100472963 364
135 3300031995 Ga0307409_100000029 Ga0307409_10000002917 364
136 3300032002 Ga0307416_100000070 Ga0307416_10000007065 364
137 3300032004 Ga0307414_10406355 Ga0307414_104063551 364
138 3300042876 Ga0451577_0002047 Ga0451577_0002047_350_1459 364
139 3300044684 Ga0466966_0026867 Ga0466966_0026867_1944_3056 364
140 3300044693 Ga0466961_0028896 Ga0466961_0028896_356_1468 364
141 3300044712 Ga0453684_0004753 Ga0453684_0004753_18369_19463 364
142 3300044712 Ga0453684_0111071 Ga0453684_0111071_154_1263 364
143 3300044712 Ga0453684_0244477 Ga0453684_0244477_123_1223 364
144 3300045051 Ga0451576_0000807 Ga0451576_0000807_33503_34597 364
145 3300045051 Ga0451576_0002243 Ga0451576_0002243_27047_28141 364
146 3300049569 Ga0501032_0000250 Ga0501032_0000250_3600_4700 364
147 3300049569 Ga0501032_0003023 Ga0501032_0003023_8582_9697 364
148 3300049570 Ga0501033_0005460 Ga0501033_0005460_374_1489 364
149 3300049571 Ga0501034_0043669 Ga0501034_0043669_2991_4106 364
150 3300049572 Ga0501036_0020655 Ga0501036_0020655_2271_3386 364
151 3300049574 Ga0501038_0021091 Ga0501038_0021091_4646_5761 364
152 3300049575 Ga0501039_0140875 Ga0501039_0140875_119_1234 364
153 3300049579 Ga0501043_0019993 Ga0501043_0019993_2729_3829 364
154 3300049579 Ga0501043_0082651 Ga0501043_0082651_1347_2462 364
155 3300049582 Ga0501048_0085425 Ga0501048_0085425_106_1221 364
156 3300049586 Ga0501070_0322612 Ga0501070_0322612_67_1182 364
157 3300049742 Ga0501080_0049684 Ga0501080_0049684_983_2080 364
158 3300049822 Ga0501035_0000309 Ga0501035_0000309_42571_43671 364
159 3300049822 Ga0501035_0093352 Ga0501035_0093352_270_1385 364
160 3300049823 Ga0501044_0000310 Ga0501044_0000310_36102_37202 364
161 3300049823 Ga0501044_0001980 Ga0501044_0001980_3065_4162 364

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

63

386

0.95

PF00266

Aminotran_5

Aminotransferase class-V

99

230

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ly1-assembly1.cif.gz_B crystal structure of putative histidinol-phosphate aminotransferase (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a resolution 0.9446 37 363
3get-assembly1.cif.gz_A crystal structure of putative histidinol-phosphate aminotransferase (np_281508.1) from campylobacter jejuni at 2.01 a resolution 0.9409 7 362
4r5z-assembly2.cif.gz_D crystal structure of rv3772 encoded aminotransferase 0.9384 7 363
3get-assembly1.cif.gz_B crystal structure of putative histidinol-phosphate aminotransferase (np_281508.1) from campylobacter jejuni at 2.01 a resolution 0.9356 7 362
3ffh-assembly1.cif.gz_B the crystal structure of histidinol-phosphate aminotransferase from listeria innocua clip11262. 0.9294 8 361
ID Description Score Start End Superfamily
af_Q2G087_68_261_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.977 76 265 3.40.640.10
4r5zC02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9699 49 270 3.40.640.10
3ffhA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9534 74 269 3.40.640.10
af_P9WML5_24_353_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9533 38 363 3.50.50.60
af_Q2G087_68_261_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9523 76 265 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A382NAJ8-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.988 114 361 GO:0008483
GO:0009058
GO:0030170
AF-A0A838DJ05-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9865 231 363 GO:0008483
GO:0009058
GO:0030170
AF-A0A836WMK6-F1-model_v4 Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) 0.985 7 357 GO:0000105
GO:0004400
GO:0030170
AF-A0A1C7HD83-F1-model_v4 deleted 0.9835 1 361
AF-A0A661T615-F1-model_v4 Histidinol-phosphate transaminase (EC 2.6.1.9) 0.983 66 361 GO:0000105
GO:0004400
GO:0030170

Feature Viewer

pLDDT pTM Quality
94.75 0.91 High
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Predicted Structure (AlphaFold2)

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