F237490

General Info

Members Datasets Scaffolds Average Seq Length
161 107 322 795

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0511863|Ga0436365_0511863_1326_3764
Length 812
Sequence MGHSMSGGESMQPRYDPHGVEERWQRTWEAEGLYNAEPDPGRTPYVDCHPPPNVTGRLHTGHALNLSVGDALIRWERMQGYNTLFQPGFDHAGISTQNVVERALLEEGTSRQELGREAFVERVWSWLHEYGGKILDDFRRIGASLDYRRSRMTMDDGYSRAVLQWFVHLYRRGWIYRANRIINWCPYHETSLSDLELEHEDTDDTLSTIRYPLADGDGYIAIATVRPATIPADVAVAVHPDDDRYKHLVGREVIVPWTENHVPVIADERVEREFGTGALKITPAHDPTDFEIGRDHGLPEPSCIGPDGRVTAPGLEGLTQDEAAAKILAWCKERDQLEKREHYRHSVAFCERCHSRIEPRISLQWWCSMTEIKQRPLELLRSGEIRYHPESQHRFAIDSLENAPDWCISRQIWWGHQIPAWYCPDGHVTVELDEPEACADCGATGLTRESDVLDTWFSSALWPFATLGWPERTPELEQFYPGNVSTTARDIIRLWENRMIFSGLELLGEKPFDDVLIHPTVLAPDGRRMSKSLGNGIDAFEVLERHGADATRYGLLKNSLTQDVRFSYAAIEEGGKLSNKLWNAARLIVTSCDGAVAAERPSSLEERWILARLSQSQRRIEGFLDAFDFAHAMDELYHLTFDDFCDWYLESVKARLYDGDADARATATFALEWLLKLLHPAMPHVTEEIWSHLPERETRLIVAPWPQAGDESDAGAFERIQEYAQVFRRSGVVPQLAGDEKRIFAAVVKPDRAPQRENGNVDAERERLRGEIARAEKMLANDRFVANAPDEVVAREREKLERYKRELDAIGP

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
36 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
37 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
38 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
39 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
40 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
41 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
42 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
43 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
44 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
45 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
46 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
47 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
48 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
49 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
52 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
53 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
54 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
55 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
56 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
57 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
58 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
59 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
60 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
61 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
62 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
63 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
64 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
65 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
66 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
67 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
70 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
77 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
106 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
107 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.62
Nodule 0
Rhizoplane 12.42
Rhizosphere 85.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0511863 3300039437 Bacteria 4245
2 Ga0070658_10009270 3300005327 Bacteria 7913
3 Ga0070658_10038239 3300005327 Bacteria 3870
4 Ga0070683_100022377 3300005329 Bacteria 5649
5 Ga0070683_100028770 3300005329 Bacteria 5025
6 Ga0070660_100000957 3300005339 Bacteria 19306
7 Ga0070659_100049878 3300005366 Bacteria 3291
8 Ga0070709_10009540 3300005434 Bacteria 5355
9 Ga0070681_10010798 3300005458 Bacteria 9026
10 Ga0070681_10059279 3300005458 Bacteria 3807
11 Ga0070679_100003916 3300005530 Bacteria 13692
12 Ga0070679_100020068 3300005530 Bacteria 6513
13 Ga0070684_100008675 3300005535 Bacteria 7967
14 Ga0070684_100009409 3300005535 Bacteria 7694
15 Ga0070684_100020883 3300005535 Bacteria 5436
16 Ga0068853_100040242 3300005539 Bacteria 3987
17 Ga0068857_100009308 3300005577 Bacteria 8526
18 Ga0068856_100064495 3300005614 Bacteria 3619
19 Ga0081455_10073373 3300005937 Bacteria 2829
20 Ga0081538_10000535 3300005981 Bacteria 41946
21 Ga0081540_1003276 3300005983 Bacteria 12877
22 Ga0081539_10001713 3300005985 Bacteria 35164
23 Ga0081539_10028679 3300005985 Bacteria 3496
24 Ga0075364_10052492 3300006051 Bacteria 2664
25 Ga0070712_100029259 3300006175 Bacteria 3692
26 Ga0075428_100004721 3300006844 Bacteria 15081
27 Ga0075429_100019783 3300006880 Bacteria 5837
28 Ga0111539_10000483 3300009094 Bacteria 50415
29 Ga0105245_10017263 3300009098 Bacteria 6298
30 Ga0105238_10013046 3300009551 Bacteria 8386
31 Ga0157369_10027845 3300013105 Bacteria 6261
32 Ga0157369_10095040 3300013105 Bacteria 3181
33 Ga0157372_10195617 3300013307 Bacteria 2342
34 Ga0207707_10003296 3300025912 Bacteria 14347
35 Ga0207707_10015069 3300025912 Bacteria 6731
36 Ga0207707_10078632 3300025912 Bacteria 2881
37 Ga0207657_10003299 3300025919 Bacteria 17249
38 Ga0207657_10007423 3300025919 Bacteria 11245
39 Ga0207652_10016431 3300025921 Bacteria 6044
40 Ga0207709_10040257 3300025935 Bacteria 2797
41 Ga0207667_10096099 3300025949 Bacteria 3058
42 Ga0207674_10012854 3300026116 Bacteria 9346
43 Ga0207675_100004406 3300026118 Bacteria 13593
44 Ga0268266_10013509 3300028379 Bacteria 7030
45 Ga0265338_10003592 3300028800 Bacteria 21643
46 Ga0265324_10007599 3300029957 Bacteria 4376
47 Ga0265316_10003289 3300031344 Bacteria 16397
48 Ga0373926_0014244 3300035083 Bacteria 2702
49 Ga0373947_0002724 3300035725 Bacteria 10597
50 Ga0395899_0001887 3300037312 Bacteria 17291
51 Ga0395899_0026695 3300037312 Bacteria 4357
52 Ga0395899_0039503 3300037312 Bacteria 3532
53 Ga0395900_0001628 3300037418 Bacteria 26393
54 Ga0395900_0009948 3300037418 Bacteria 9737
55 Ga0395900_0039844 3300037418 Bacteria 4841
56 Ga0395900_0041882 3300037418 Bacteria 4719
57 Ga0395900_0055101 3300037418 Bacteria 4094
58 Ga0395898_0002754 3300037466 Bacteria 20249
59 Ga0395898_0002935 3300037466 Bacteria 19394
60 Ga0395898_0003127 3300037466 Bacteria 18689
61 Ga0395898_0051063 3300037466 Bacteria 4044
62 Ga0395905_0012832 3300037471 Bacteria 8057
63 Ga0395905_0064321 3300037471 Bacteria 3432
64 Ga0395901_0000391 3300038443 Bacteria 52295
65 Ga0395901_0007082 3300038443 Bacteria 11336
66 Ga0395901_0008477 3300038443 Bacteria 10389
67 Ga0395901_0009318 3300038443 Bacteria 9951
68 Ga0395901_0040406 3300038443 Bacteria 4831
69 Ga0395901_0044370 3300038443 Bacteria 4611
70 Ga0395901_0117174 3300038443 Bacteria 2798
71 Ga0395901_0140476 3300038443 Bacteria 2538
72 Ga0451853_2064477 3300041512 Bacteria 3684
73 Ga0466966_0000711 3300044684 Bacteria 21107
74 Ga0466966_0013115 3300044684 Bacteria 5487
75 Ga0466966_0022512 3300044684 Bacteria 4134
76 Ga0466961_0001104 3300044693 Bacteria 16599
77 Ga0466963_0001174 3300044694 Bacteria 13744
78 Ga0466963_0003584 3300044694 Bacteria 8921
79 Ga0466963_0009972 3300044694 Bacteria 5740
80 Ga0466968_0005146 3300044735 Bacteria 4894
81 Ga0466957_0014815 3300044842 Bacteria 4544
82 Ga0466959_0000543 3300045049 Bacteria 21954
83 Ga0466959_0034322 3300045049 Bacteria 3752
84 Ga0466958_0009536 3300045836 Bacteria 5411
85 Ga0466967_0001358 3300045976 Bacteria 14064
86 Ga0466967_0002217 3300045976 Bacteria 11952
87 Ga0466967_0002274 3300045976 Bacteria 11850
88 Ga0466967_0012026 3300045976 Bacteria 6597
89 Ga0466967_0020117 3300045976 Bacteria 5385
90 Ga0466967_0034484 3300045976 Bacteria 4296
91 Ga0495603_0044350 3300046455 Bacteria 2654
92 Ga0495653_0010387 3300046463 Bacteria 7614
93 Ga0495653_0040406 3300046463 Bacteria 3645
94 Ga0495582_0022911 3300046473 Bacteria 3416
95 Ga0495608_0006103 3300046511 Bacteria 8550
96 Ga0495630_0011048 3300046517 Bacteria 6531
97 Ga0495630_0035355 3300046517 Bacteria 3734
98 Ga0495652_0043400 3300046529 Bacteria 3873
99 Ga0495667_0012263 3300046559 Bacteria 5810
100 Ga0495667_0044058 3300046559 Bacteria 2955
101 Ga0495634_0007652 3300046642 Bacteria 8092
102 Ga0495634_0024734 3300046642 Bacteria 4210
103 Ga0495634_0032612 3300046642 Bacteria 3582
104 Ga0495581_0039043 3300047315 Bacteria 2749
105 Ga0495674_0001328 3300047319 Bacteria 24089
106 Ga0495680_0017701 3300047322 Bacteria 6070
107 Ga0496100_0025040 3300048903 Bacteria 3645
108 Ga0496101_0001237 3300048904 Bacteria 15272
109 Ga0496101_0002613 3300048904 Bacteria 11067
110 Ga0496102_0006397 3300048905 Bacteria 10041
111 Ga0496102_0050126 3300048905 Bacteria 3800
112 Ga0496104_0062691 3300048907 Bacteria 3525
113 Ga0496105_0000475 3300048908 Bacteria 26269
114 Ga0496106_0005612 3300048909 Bacteria 9286
115 Ga0496106_0008345 3300048909 Bacteria 7668
116 Ga0496107_0009869 3300048910 Bacteria 6621
117 Ga0496108_0000549 3300048911 Bacteria 29334
118 Ga0496109_0000479 3300048912 Bacteria 34013
119 Ga0496109_0048421 3300048912 Bacteria 3867
120 Ga0496110_0000289 3300048913 Bacteria 32969
121 Ga0496110_0031049 3300048913 Bacteria 4608
122 Ga0496111_0000145 3300048914 Bacteria 31804
123 Ga0496111_0020422 3300048914 Bacteria 4611
124 Ga0496112_0013388 3300048915 Bacteria 7571
125 Ga0496112_0034382 3300048915 Bacteria 4933
126 Ga0496115_0001920 3300048918 Bacteria 14839
127 Ga0501032_0017834 3300049569 Bacteria 4981
128 Ga0501033_0004383 3300049570 Bacteria 11309
129 Ga0501038_0001801 3300049574 Bacteria 19835
130 Ga0501040_0025088 3300049576 Bacteria 4005
131 Ga0501041_0005665 3300049577 Bacteria 7301
132 Ga0501042_0018611 3300049578 Bacteria 4811
133 Ga0501043_0014516 3300049579 Bacteria 6167
134 Ga0501046_0029148 3300049580 Bacteria 4490
135 Ga0501046_0077655 3300049580 Bacteria 2570
136 Ga0501047_0017991 3300049581 Bacteria 6773
137 Ga0501048_0003212 3300049582 Bacteria 12449
138 Ga0501067_0003485 3300049583 Bacteria 8644
139 Ga0501068_0010089 3300049584 Bacteria 5299
140 Ga0501069_0000923 3300049585 Bacteria 14014
141 Ga0501070_0000318 3300049586 Bacteria 43769
142 Ga0501070_0026108 3300049586 Bacteria 4901
143 Ga0501070_0039583 3300049586 Bacteria 3932
144 Ga0501071_0000334 3300049587 Bacteria 22757
145 Ga0501072_0008103 3300049588 Bacteria 7973
146 Ga0501073_0031071 3300049589 Bacteria 3812
147 Ga0501074_0017564 3300049590 Bacteria 5193
148 Ga0501075_0019121 3300049591 Bacteria 4968
149 Ga0501076_0015246 3300049592 Bacteria 5806
150 Ga0501080_0033794 3300049742 Bacteria 4774
151 Ga0501081_0009682 3300049743 Bacteria 6282
152 Ga0501083_0001268 3300049744 Bacteria 17096
153 Ga0501035_0020296 3300049822 Bacteria 6100
154 Ga0501045_0006842 3300049824 Bacteria 7898
155 nmdc:mga05p37_50890_c1 3300050507 Bacteria 5094
156 nmdc:mga08y16_21445_c1 3300050511 Bacteria 6822
157 nmdc:mga08y16_32447_c1 3300050511 Bacteria 5490
158 Ga0501084_0020949 3300054114 Bacteria 5452
159 Ga0501082_0068169 3300060353 Bacteria 3063
160 Ga0466962_0003523 3300061719 Bacteria 7461
161 Ga0530510_0011540 3300061734 Bacteria 6199
162 Ga0436365_0511863
163 Ga0070658_10009270
164 Ga0070658_10038239
165 Ga0070683_100022377
166 Ga0070683_100028770
167 Ga0070660_100000957
168 Ga0070659_100049878
169 Ga0070709_10009540
170 Ga0070681_10010798
171 Ga0070681_10059279
172 Ga0070679_100003916
173 Ga0070679_100020068
174 Ga0070684_100008675
175 Ga0070684_100009409
176 Ga0070684_100020883
177 Ga0068853_100040242
178 Ga0068857_100009308
179 Ga0068856_100064495
180 Ga0081455_10073373
181 Ga0081538_10000535
182 Ga0081540_1003276
183 Ga0081539_10001713
184 Ga0081539_10028679
185 Ga0075364_10052492
186 Ga0070712_100029259
187 Ga0075428_100004721
188 Ga0075429_100019783
189 Ga0111539_10000483
190 Ga0105245_10017263
191 Ga0105238_10013046
192 Ga0157369_10027845
193 Ga0157369_10095040
194 Ga0157372_10195617
195 Ga0207707_10003296
196 Ga0207707_10015069
197 Ga0207707_10078632
198 Ga0207657_10003299
199 Ga0207657_10007423
200 Ga0207652_10016431
201 Ga0207709_10040257
202 Ga0207667_10096099
203 Ga0207674_10012854
204 Ga0207675_100004406
205 Ga0268266_10013509
206 Ga0265338_10003592
207 Ga0265324_10007599
208 Ga0265316_10003289
209 Ga0373926_0014244
210 Ga0373947_0002724
211 Ga0395899_0001887
212 Ga0395899_0026695
213 Ga0395899_0039503
214 Ga0395900_0001628
215 Ga0395900_0009948
216 Ga0395900_0039844
217 Ga0395900_0041882
218 Ga0395900_0055101
219 Ga0395898_0002754
220 Ga0395898_0002935
221 Ga0395898_0003127
222 Ga0395898_0051063
223 Ga0395905_0012832
224 Ga0395905_0064321
225 Ga0395901_0000391
226 Ga0395901_0007082
227 Ga0395901_0008477
228 Ga0395901_0009318
229 Ga0395901_0040406
230 Ga0395901_0044370
231 Ga0395901_0117174
232 Ga0395901_0140476
233 Ga0451853_2064477
234 Ga0466966_0000711
235 Ga0466966_0013115
236 Ga0466966_0022512
237 Ga0466961_0001104
238 Ga0466963_0001174
239 Ga0466963_0003584
240 Ga0466963_0009972
241 Ga0466968_0005146
242 Ga0466957_0014815
243 Ga0466959_0000543
244 Ga0466959_0034322
245 Ga0466958_0009536
246 Ga0466967_0001358
247 Ga0466967_0002217
248 Ga0466967_0002274
249 Ga0466967_0012026
250 Ga0466967_0020117
251 Ga0466967_0034484
252 Ga0495603_0044350
253 Ga0495653_0010387
254 Ga0495653_0040406
255 Ga0495582_0022911
256 Ga0495608_0006103
257 Ga0495630_0011048
258 Ga0495630_0035355
259 Ga0495652_0043400
260 Ga0495667_0012263
261 Ga0495667_0044058
262 Ga0495634_0007652
263 Ga0495634_0024734
264 Ga0495634_0032612
265 Ga0495581_0039043
266 Ga0495674_0001328
267 Ga0495680_0017701
268 Ga0496100_0025040
269 Ga0496101_0001237
270 Ga0496101_0002613
271 Ga0496102_0006397
272 Ga0496102_0050126
273 Ga0496104_0062691
274 Ga0496105_0000475
275 Ga0496106_0005612
276 Ga0496106_0008345
277 Ga0496107_0009869
278 Ga0496108_0000549
279 Ga0496109_0000479
280 Ga0496109_0048421
281 Ga0496110_0000289
282 Ga0496110_0031049
283 Ga0496111_0000145
284 Ga0496111_0020422
285 Ga0496112_0013388
286 Ga0496112_0034382
287 Ga0496115_0001920
288 Ga0501032_0017834
289 Ga0501033_0004383
290 Ga0501038_0001801
291 Ga0501040_0025088
292 Ga0501041_0005665
293 Ga0501042_0018611
294 Ga0501043_0014516
295 Ga0501046_0029148
296 Ga0501046_0077655
297 Ga0501047_0017991
298 Ga0501048_0003212
299 Ga0501067_0003485
300 Ga0501068_0010089
301 Ga0501069_0000923
302 Ga0501070_0000318
303 Ga0501070_0026108
304 Ga0501070_0039583
305 Ga0501071_0000334
306 Ga0501072_0008103
307 Ga0501073_0031071
308 Ga0501074_0017564
309 Ga0501075_0019121
310 Ga0501076_0015246
311 Ga0501080_0033794
312 Ga0501081_0009682
313 Ga0501083_0001268
314 Ga0501035_0020296
315 Ga0501045_0006842
316 nmdc:mga05p37_50890_c1
317 nmdc:mga08y16_21445_c1
318 nmdc:mga08y16_32447_c1
319 Ga0501084_0020949
320 Ga0501082_0068169
321 Ga0466962_0003523
322 Ga0530510_0011540

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

23

567

0.96

PF10458

Val_tRNA-synt_C

Valyl tRNA synthetase tRNA binding arm

760

811

0.9

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

606

738

0.88

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

489

586

0.84

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

45

202

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wka-assembly1.cif.gz_A structural basis for non-cognate amino acid discrimination by the valyl-trna synthetase editing domain 0.9423 200 338
1wka-assembly1.cif.gz_A structural basis for non-cognate amino acid discrimination by the valyl-trna synthetase editing domain 0.9107 200 338
1ue0-assembly2.cif.gz_B isoleucyl-trna synthetase editing domain complexed with l-valine 0.9082 199 336
7pqk-assembly1.cif.gz_A co-crystal structure of m. tuberculosis leurs in complex with the adduct formed by prodrug cmpd1 with adenosine-monophosphate 0.8985 201 336
5ags-assembly1.cif.gz_A crystal structure of the leurs editing domain of mycobacterium tuberculosis in complex with the adduct 3-(aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3h)-ol-amp 0.897 202 336
ID Description Score Start End Superfamily
af_Q2FXR8_200_287_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9848 205 289 3.90.740.10
af_Q86KU2_315_433_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9614 201 305 3.90.740.10
af_A0A0R0FN16_22_167_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9603 197 338 3.90.740.10
1ivsB05 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Valyl-tRNA synthetase, C-terminal domain 0.9558 746 795 1.10.287.380
af_O14160_232_372_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9533 201 334 3.90.740.10
ID Description Score Start End GO Terms
AF-A0A351TXW3-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9792 215 346 GO:0002161
GO:0004832
GO:0005524
GO:0005829
GO:0006438
AF-A0A641V653-F1-model_v4 deleted 0.9778 211 308
AF-A0A351TXW3-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9578 215 346 GO:0002161
GO:0004832
GO:0005524
GO:0005829
GO:0006438
AF-A0A3D0S0S0-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9511 188 305 GO:0002161
GO:0004832
GO:0005524
GO:0005829
GO:0006438
AF-A0A7S1HK68-F1-model_v4 valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) 0.9506 224 360 GO:0002161
GO:0004832
GO:0005524
GO:0005829
GO:0006438

Map