F236066

General Info

Members Datasets Scaffolds Average Seq Length
161 91 157 253

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10193632|Ga0065712_101936321
Length 307
Sequence MVAISFGISGIYGLLIFIRFFSFLILLCNCKHHGVLRLKQDVPIKHSDFLNQKIKTMAEQKGIIPLSGTIGNITFYKSKDGFMAREKGSLDASRIATDPAFQRTRENGAEFGRAGKAGKYLRTALRSLLQNVSDSRMIARLVKEMMRVIKADETNPRGFRNVIDGEAELLKGFEFNANSKLGTTLFAPFTGSINRVTGQLAVTIASFIPVNMITAPNGTTHFKIVSAGAEIDFEQGSYTAENTTTADMPWDSNGTAVINLVNHVTANSTKPLFLVLGIEFYQLVNGTMYTLKNGAFNALALVDVSGE

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
3 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
4 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
40 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
62 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
81 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
82 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
83 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
84 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
85 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
86 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
87 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
88 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
89 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
90 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
91 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.52
Metatranscriptomes 0
Isolates 2.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.35
Nodule 0
Rhizoplane 0
Rhizosphere 88.2
Stem 0
Stem Tuber 0
Unclassified 7.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1463292 2162886007 Unclassified 1782
2 rootH2_10042054 3300003320 Bacteria 45299
3 rootH2_10340267 3300003320 Bacteria 1808
4 rootL2_10055552 3300003322 Bacteria 3439
5 rootL2_10229395 3300003322 Bacteria 4677
6 rootH1_10024029 3300003323 Bacteria 55793
7 rootH1_10255424 3300003323 Bacteria 2073
8 rootH1_10325556 3300003323 Unclassified 1523
9 Ga0065704_10015527 3300005289 Bacteria 1746
10 Ga0065704_10074232 3300005289 Bacteria 6438
11 Ga0065712_10193632 3300005290 Bacteria 1137
12 Ga0065707_10219977 3300005295 Bacteria 1229
13 Ga0070658_10006828 3300005327 Bacteria 9229
14 Ga0070658_10027442 3300005327 Bacteria 4569
15 Ga0070680_100219007 3300005336 Bacteria 1606
16 Ga0070682_100000119 3300005337 Bacteria 69362
17 Ga0070661_100364063 3300005344 Bacteria 1137
18 Ga0070692_10107514 3300005345 Bacteria 1538
19 Ga0070671_100294749 3300005355 Bacteria 1381
20 Ga0070659_100097211 3300005366 Unclassified 2366
21 Ga0070681_10201982 3300005458 Bacteria 1906
22 Ga0070698_100015733 3300005471 Bacteria 7991
23 Ga0068855_100015747 3300005563 Bacteria 9095
24 Ga0068852_100218499 3300005616 Bacteria 1811
25 Ga0068859_100149352 3300005617 Bacteria 2413
26 Ga0068864_100349209 3300005618 Bacteria 1395
27 Ga0068863_100005659 3300005841 Bacteria 12272
28 Ga0068863_100320698 3300005841 Bacteria 1505
29 Ga0097620_100149351 3300006931 Bacteria 2413
30 Ga0105240_10675261 3300009093 Bacteria 1130
31 Ga0105242_10686237 3300009176 Bacteria 1000
32 Ga0105249_10111608 3300009553 Bacteria 2585
33 Ga0105249_10169088 3300009553 Bacteria 2118
34 Ga0105249_10221001 3300009553 Unclassified 1864
35 Ga0157373_10027960 3300013100 Bacteria 4068
36 Ga0157373_10114604 3300013100 Unclassified 1895
37 Ga0157373_10119642 3300013100 Bacteria 1851
38 Ga0157371_10002945 3300013102 Bacteria 15853
39 Ga0157371_10004748 3300013102 Bacteria 11723
40 Ga0157371_10010883 3300013102 Bacteria 7055
41 Ga0157371_10027762 3300013102 Bacteria 4102
42 Ga0157371_10044072 3300013102 Unclassified 3178
43 Ga0157371_10063855 3300013102 Unclassified 2610
44 Ga0157370_10016825 3300013104 Bacteria 7392
45 Ga0157370_10026370 3300013104 Bacteria 5739
46 Ga0157369_10001040 3300013105 Bacteria 35071
47 Ga0157369_10115909 3300013105 Bacteria 2845
48 Ga0157369_10185769 3300013105 Bacteria 2186
49 Ga0157369_10264136 3300013105 Bacteria 1795
50 Ga0163162_10430796 3300013306 Bacteria 1451
51 Ga0157372_10005329 3300013307 Bacteria 13659
52 Ga0157372_10005882 3300013307 Bacteria 13056
53 Ga0157372_10016391 3300013307 Bacteria 7949
54 Ga0157372_10120451 3300013307 Unclassified 3013
55 Ga0157372_10153708 3300013307 Bacteria 2657
56 Ga0157372_10161086 3300013307 Bacteria 2593
57 Ga0157375_11010916 3300013308 Bacteria 971
58 Ga0157377_10061804 3300014745 Bacteria 2142
59 Ga0157376_10206187 3300014969 Bacteria 1812
60 Ga0209564_1000465 3300025295 Bacteria 67957
61 Ga0209758_1000690 3300025297 Bacteria 50019
62 Ga0207656_10086895 3300025321 Bacteria 1414
63 Ga0207705_10002223 3300025909 Bacteria 14980
64 Ga0207705_10013245 3300025909 Bacteria 5953
65 Ga0207707_10275908 3300025912 Bacteria 1456
66 Ga0207660_10010985 3300025917 Bacteria 5887
67 Ga0207657_10123547 3300025919 Bacteria 2128
68 Ga0207652_10260897 3300025921 Bacteria 1563
69 Ga0207652_10313778 3300025921 Bacteria 1415
70 Ga0207644_10183387 3300025931 Unclassified 1642
71 Ga0207667_10024361 3300025949 Bacteria 6645
72 Ga0207712_10013232 3300025961 Bacteria 5287
73 Ga0207712_10058191 3300025961 Bacteria 2730
74 Ga0207641_10001405 3300026088 Bacteria 23727
75 Ga0207676_10012469 3300026095 Bacteria 6092
76 Ga0207676_10027830 3300026095 Bacteria 4216
77 Ga0207698_10555609 3300026142 Bacteria 1126
78 Ga0307408_100003044 3300031548 Bacteria 11577
79 Ga0307408_100061111 3300031548 Bacteria 2749
80 Ga0307412_10200320 3300031911 Bacteria 1516
81 Ga0373927_0281789 3300035695 Bacteria 1093
82 Ga0395899_0005802 3300037312 Bacteria 9582
83 Ga0395899_0025381 3300037312 Bacteria 4473
84 Ga0395899_0042952 3300037312 Unclassified 3372
85 Ga0395899_0085581 3300037312 Bacteria 2290
86 Ga0395900_0003735 3300037418 Bacteria 16347
87 Ga0395900_0005490 3300037418 Bacteria 13272
88 Ga0395900_0080935 3300037418 Bacteria 3337
89 Ga0395900_0160829 3300037418 Bacteria 2290
90 Ga0395900_0226656 3300037418 Unclassified 1881
91 Ga0395900_0471688 3300037418 Unclassified 1208
92 Ga0395900_0923633 3300037418 Unclassified 795
93 Ga0395898_0005362 3300037466 Bacteria 13852
94 Ga0395898_0034668 3300037466 Bacteria 5026
95 Ga0395898_0050012 3300037466 Bacteria 4093
96 Ga0395898_0202163 3300037466 Bacteria 1896
97 Ga0395905_0381301 3300037471 Bacteria 1304
98 Ga0395901_0123945 3300038443 Bacteria 2715
99 Ga0395901_0448103 3300038443 Unclassified 1320
100 Ga0395901_0539594 3300038443 Bacteria 1183
101 Ga0436365_1541966 3300039437 Bacteria 1174
102 Ga0451853_3721912 3300041512 Bacteria 1195
103 Ga0439431_0056944 3300041997 Unclassified 1022
104 Ga0453683_0276033 3300044673 Bacteria 1073
105 Ga0453684_0002734 3300044712 Bacteria 41757
106 Ga0453684_0574278 3300044712 Unclassified 1239
107 Ga0453684_0594877 3300044712 Unclassified 1213
108 Ga0466957_0280003 3300044842 Bacteria 1116
109 Ga0451576_0001327 3300045051 Bacteria 42784
110 Ga0451576_0010735 3300045051 Bacteria 10484
111 Ga0495672_0015523 3300047320 Bacteria 5166
112 Ga0501031_0105239 3300049568 Unclassified 1841
113 Ga0501032_0023450 3300049569 Bacteria 4263
114 Ga0501032_0370051 3300049569 Unclassified 922
115 Ga0501034_0000693 3300049571 Bacteria 51177
116 Ga0501034_0007079 3300049571 Bacteria 11964
117 Ga0501034_0009059 3300049571 Bacteria 10452
118 Ga0501034_0145092 3300049571 Bacteria 2351
119 Ga0501036_0074179 3300049572 Bacteria 2877
120 Ga0501036_0174463 3300049572 Unclassified 1810
121 Ga0501036_0478989 3300049572 Unclassified 1036
122 Ga0501037_0416299 3300049573 Unclassified 920
123 Ga0501038_0228075 3300049574 Unclassified 1483
124 Ga0501039_0003930 3300049575 Bacteria 11172
125 Ga0501039_0028961 3300049575 Bacteria 4265
126 Ga0501039_0058015 3300049575 Bacteria 2997
127 Ga0501040_0112402 3300049576 Unclassified 1905
128 Ga0501043_0010878 3300049579 Bacteria 7124
129 Ga0501043_0044168 3300049579 Unclassified 3503
130 Ga0501043_0053679 3300049579 Bacteria 3165
131 Ga0501043_0093553 3300049579 Bacteria 2363
132 Ga0501046_0117960 3300049580 Unclassified 2022
133 Ga0501046_0195224 3300049580 Unclassified 1508
134 Ga0501047_0031206 3300049581 Bacteria 5140
135 Ga0501047_0182348 3300049581 Unclassified 1966
136 Ga0501047_0242901 3300049581 Unclassified 1651
137 Ga0501048_0207409 3300049582 Bacteria 1390
138 Ga0501073_0000260 3300049589 Bacteria 34932
139 Ga0501073_0051830 3300049589 Bacteria 2874
140 Ga0501074_0000997 3300049590 Bacteria 18417
141 Ga0501257_012610 3300049686 Unclassified 1935
142 Ga0501079_0399286 3300049741 Unclassified 1078
143 Ga0501080_0005024 3300049742 Bacteria 11784
144 Ga0501080_0109901 3300049742 Bacteria 2555
145 Ga0501080_0110208 3300049742 Unclassified 2551
146 Ga0501080_0450925 3300049742 Unclassified 1153
147 Ga0501080_0503172 3300049742 Bacteria 1082
148 Ga0501083_0283857 3300049744 Bacteria 1077
149 Ga0501044_0008297 3300049823 Bacteria 11388
150 Ga0501044_0183125 3300049823 Bacteria 2061
151 Ga0501044_0248904 3300049823 Bacteria 1719
152 Ga0501044_0275449 3300049823 Bacteria 1617
153 nmdc:mga0k408_159008_c1 3300050493 Bacteria 1346
154 Ga0500641_0001715 3300053096 Bacteria 7790
155 Ga0500594_0002761 3300053118 Bacteria 3821
156 Ga0500616_0065396 3300053153 Unclassified 1870
157 Ga0500622_0000005 3300053156 Bacteria 502443

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025921 Ga0207652_10313778 Ga0207652_103137782 215
2 3300049742 Ga0501080_0503172 Ga0501080_0503172_120_971 215
3 3300049823 Ga0501044_0183125 Ga0501044_0183125_133_996 226
4 3300049571 Ga0501034_0145092 Ga0501034_0145092_867_1622 236
5 3300005327 Ga0070658_10027442 Ga0070658_100274426 245
6 3300005336 Ga0070680_100219007 Ga0070680_1002190073 245
7 3300005345 Ga0070692_10107514 Ga0070692_101075142 245
8 3300005563 Ga0068855_100015747 Ga0068855_1000157477 245
9 3300013102 Ga0157371_10004748 Ga0157371_100047482 245
10 3300013105 Ga0157369_10264136 Ga0157369_102641362 245
11 3300013307 Ga0157372_10005882 Ga0157372_100058829 245
12 3300025909 Ga0207705_10002223 Ga0207705_100022236 245
13 3300025912 Ga0207707_10275908 Ga0207707_102759082 245
14 3300025917 Ga0207660_10010985 Ga0207660_100109855 245
15 3300025919 Ga0207657_10123547 Ga0207657_101235472 245
16 3300025949 Ga0207667_10024361 Ga0207667_100243616 245
17 3300031548 Ga0307408_100003044 Ga0307408_1000030441 245
18 3300037312 Ga0395899_0005802 Ga0395899_0005802_7923_8678 245
19 3300037418 Ga0395900_0005490 Ga0395900_0005490_11394_12149 245
20 3300037466 Ga0395898_0034668 Ga0395898_0034668_844_1599 245
21 3300037471 Ga0395905_0381301 Ga0395905_0381301_177_932 245
22 3300038443 Ga0395901_0123945 Ga0395901_0123945_1234_1989 245
23 iso_pu_bacteria 2818991460 2819679291 246
24 iso_pu_bacteria 2818991460 2819679780 246
25 iso_pu_bacteria 2833640130 2833643885 246
26 iso_pu_bacteria 2919509842 2919512151 246
27 3300041512 Ga0451853_3721912 Ga0451853_3721912_318_1064 247
28 3300049686 Ga0501257_012610 Ga0501257_012610_828_1577 249
29 2162886007 SwRhRL2b_contig_1463292 SwRhRL2b_0880.00006820 250
30 3300003320 rootH2_10042054 rootH2_1004205436 250
31 3300003320 rootH2_10340267 rootH2_103402672 250
32 3300003322 rootL2_10055552 rootL2_100555525 250
33 3300003322 rootL2_10229395 rootL2_102293956 250
34 3300003323 rootH1_10024029 rootH1_1002402949 250
35 3300003323 rootH1_10255424 rootH1_102554242 250
36 3300003323 rootH1_10325556 rootH1_103255562 250
37 3300005289 Ga0065704_10015527 Ga0065704_100155273 250
38 3300005289 Ga0065704_10074232 Ga0065704_100742324 250
39 3300005290 Ga0065712_10193632 Ga0065712_101936321 250
40 3300005295 Ga0065707_10219977 Ga0065707_102199772 250
41 3300005327 Ga0070658_10006828 Ga0070658_100068287 250
42 3300005337 Ga0070682_100000119 Ga0070682_10000011925 250
43 3300005344 Ga0070661_100364063 Ga0070661_1003640632 250
44 3300005355 Ga0070671_100294749 Ga0070671_1002947491 250
45 3300005366 Ga0070659_100097211 Ga0070659_1000972112 250
46 3300005458 Ga0070681_10201982 Ga0070681_102019824 250
47 3300005471 Ga0070698_100015733 Ga0070698_1000157333 250
48 3300005616 Ga0068852_100218499 Ga0068852_1002184993 250
49 3300005617 Ga0068859_100149352 Ga0068859_1001493524 250
50 3300005618 Ga0068864_100349209 Ga0068864_1003492092 250
51 3300005841 Ga0068863_100005659 Ga0068863_10000565911 250
52 3300005841 Ga0068863_100320698 Ga0068863_1003206982 250
53 3300006931 Ga0097620_100149351 Ga0097620_1001493514 250
54 3300009093 Ga0105240_10675261 Ga0105240_106752612 250
55 3300009176 Ga0105242_10686237 Ga0105242_106862371 250
56 3300009553 Ga0105249_10111608 Ga0105249_101116082 250
57 3300009553 Ga0105249_10169088 Ga0105249_101690883 250
58 3300009553 Ga0105249_10221001 Ga0105249_102210014 250
59 3300013100 Ga0157373_10027960 Ga0157373_100279604 250
60 3300013100 Ga0157373_10114604 Ga0157373_101146043 250
61 3300013100 Ga0157373_10119642 Ga0157373_101196422 250
62 3300013102 Ga0157371_10002945 Ga0157371_1000294511 250
63 3300013102 Ga0157371_10010883 Ga0157371_100108832 250
64 3300013102 Ga0157371_10027762 Ga0157371_100277626 250
65 3300013102 Ga0157371_10044072 Ga0157371_100440725 250
66 3300013102 Ga0157371_10063855 Ga0157371_100638552 250
67 3300013104 Ga0157370_10016825 Ga0157370_100168254 250
68 3300013104 Ga0157370_10026370 Ga0157370_100263704 250
69 3300013105 Ga0157369_10001040 Ga0157369_100010404 250
70 3300013105 Ga0157369_10115909 Ga0157369_101159091 250
71 3300013105 Ga0157369_10185769 Ga0157369_101857693 250
72 3300013306 Ga0163162_10430796 Ga0163162_104307962 250
73 3300013307 Ga0157372_10005329 Ga0157372_1000532914 250
74 3300013307 Ga0157372_10016391 Ga0157372_100163916 250
75 3300013307 Ga0157372_10120451 Ga0157372_101204513 250
76 3300013307 Ga0157372_10153708 Ga0157372_101537083 250
77 3300013307 Ga0157372_10161086 Ga0157372_101610863 250
78 3300013308 Ga0157375_11010916 Ga0157375_110109162 250
79 3300014745 Ga0157377_10061804 Ga0157377_100618042 250
80 3300014969 Ga0157376_10206187 Ga0157376_102061873 250
81 3300025295 Ga0209564_1000465 Ga0209564_100046539 250
82 3300025297 Ga0209758_1000690 Ga0209758_100069033 250
83 3300025321 Ga0207656_10086895 Ga0207656_100868952 250
84 3300025909 Ga0207705_10013245 Ga0207705_100132456 250
85 3300025921 Ga0207652_10260897 Ga0207652_102608972 250
86 3300025931 Ga0207644_10183387 Ga0207644_101833872 250
87 3300025961 Ga0207712_10013232 Ga0207712_100132322 250
88 3300025961 Ga0207712_10058191 Ga0207712_100581912 250
89 3300026088 Ga0207641_10001405 Ga0207641_1000140517 250
90 3300026095 Ga0207676_10012469 Ga0207676_100124694 250
91 3300026095 Ga0207676_10027830 Ga0207676_100278304 250
92 3300026142 Ga0207698_10555609 Ga0207698_105556091 250
93 3300031548 Ga0307408_100061111 Ga0307408_1000611116 250
94 3300031911 Ga0307412_10200320 Ga0307412_102003203 250
95 3300035695 Ga0373927_0281789 Ga0373927_0281789_96_857 250
96 3300037312 Ga0395899_0025381 Ga0395899_0025381_2843_3598 250
97 3300037312 Ga0395899_0042952 Ga0395899_0042952_2122_2943 250
98 3300037312 Ga0395899_0085581 Ga0395899_0085581_327_1127 250
99 3300037418 Ga0395900_0003735 Ga0395900_0003735_3287_4042 250
100 3300037418 Ga0395900_0080935 Ga0395900_0080935_1354_2157 250
101 3300037418 Ga0395900_0160829 Ga0395900_0160829_285_1088 250
102 3300037418 Ga0395900_0226656 Ga0395900_0226656_444_1199 250
103 3300037418 Ga0395900_0471688 Ga0395900_0471688_123_923 250
104 3300037418 Ga0395900_0923633 Ga0395900_0923633_10_765 250
105 3300037466 Ga0395898_0005362 Ga0395898_0005362_12213_12968 250
106 3300037466 Ga0395898_0050012 Ga0395898_0050012_1796_2614 250
107 3300037466 Ga0395898_0202163 Ga0395898_0202163_186_989 250
108 3300038443 Ga0395901_0448103 Ga0395901_0448103_421_1221 250
109 3300038443 Ga0395901_0539594 Ga0395901_0539594_12_830 250
110 3300039437 Ga0436365_1541966 Ga0436365_1541966_200_961 250
111 3300041997 Ga0439431_0056944 Ga0439431_0056944_36_794 250
112 3300044673 Ga0453683_0276033 Ga0453683_0276033_203_958 250
113 3300044712 Ga0453684_0002734 Ga0453684_0002734_39672_40427 250
114 3300044712 Ga0453684_0574278 Ga0453684_0574278_452_1213 250
115 3300044712 Ga0453684_0594877 Ga0453684_0594877_21_782 250
116 3300044842 Ga0466957_0280003 Ga0466957_0280003_102_878 250
117 3300045051 Ga0451576_0001327 Ga0451576_0001327_3176_3940 250
118 3300045051 Ga0451576_0010735 Ga0451576_0010735_6579_7352 250
119 3300047320 Ga0495672_0015523 Ga0495672_0015523_3959_4714 250
120 3300049568 Ga0501031_0105239 Ga0501031_0105239_791_1546 250
121 3300049569 Ga0501032_0023450 Ga0501032_0023450_1146_1901 250
122 3300049569 Ga0501032_0370051 Ga0501032_0370051_58_813 250
123 3300049571 Ga0501034_0000693 Ga0501034_0000693_13036_13791 250
124 3300049571 Ga0501034_0007079 Ga0501034_0007079_8241_8996 250
125 3300049571 Ga0501034_0009059 Ga0501034_0009059_1185_1943 250
126 3300049572 Ga0501036_0074179 Ga0501036_0074179_1124_1882 250
127 3300049572 Ga0501036_0174463 Ga0501036_0174463_352_1107 250
128 3300049572 Ga0501036_0478989 Ga0501036_0478989_75_830 250
129 3300049573 Ga0501037_0416299 Ga0501037_0416299_126_881 250
130 3300049574 Ga0501038_0228075 Ga0501038_0228075_208_1011 250
131 3300049575 Ga0501039_0003930 Ga0501039_0003930_1023_1781 250
132 3300049575 Ga0501039_0028961 Ga0501039_0028961_107_862 250
133 3300049575 Ga0501039_0058015 Ga0501039_0058015_1997_2752 250
134 3300049576 Ga0501040_0112402 Ga0501040_0112402_937_1692 250
135 3300049579 Ga0501043_0010878 Ga0501043_0010878_1368_2123 250
136 3300049579 Ga0501043_0044168 Ga0501043_0044168_2598_3359 250
137 3300049579 Ga0501043_0053679 Ga0501043_0053679_1255_2013 250
138 3300049579 Ga0501043_0093553 Ga0501043_0093553_785_1588 250
139 3300049580 Ga0501046_0117960 Ga0501046_0117960_620_1375 250
140 3300049580 Ga0501046_0195224 Ga0501046_0195224_673_1428 250
141 3300049581 Ga0501047_0031206 Ga0501047_0031206_686_1441 250
142 3300049581 Ga0501047_0182348 Ga0501047_0182348_552_1355 250
143 3300049581 Ga0501047_0242901 Ga0501047_0242901_200_961 250
144 3300049582 Ga0501048_0207409 Ga0501048_0207409_475_1230 250
145 3300049589 Ga0501073_0000260 Ga0501073_0000260_32650_33405 250
146 3300049589 Ga0501073_0051830 Ga0501073_0051830_1468_2229 250
147 3300049590 Ga0501074_0000997 Ga0501074_0000997_10762_11517 250
148 3300049741 Ga0501079_0399286 Ga0501079_0399286_144_899 250
149 3300049742 Ga0501080_0005024 Ga0501080_0005024_728_1483 250
150 3300049742 Ga0501080_0109901 Ga0501080_0109901_1497_2258 250
151 3300049742 Ga0501080_0110208 Ga0501080_0110208_1740_2501 250
152 3300049742 Ga0501080_0450925 Ga0501080_0450925_373_1128 250
153 3300049744 Ga0501083_0283857 Ga0501083_0283857_281_1036 250
154 3300049823 Ga0501044_0008297 Ga0501044_0008297_6186_6944 250
155 3300049823 Ga0501044_0248904 Ga0501044_0248904_702_1457 250
156 3300049823 Ga0501044_0275449 Ga0501044_0275449_241_996 250
157 3300050493 nmdc:mga0k408_159008_c1 nmdc:mga0k408_159008_c1_315_1073 250
158 3300053096 Ga0500641_0001715 Ga0500641_0001715_4289_5047 250
159 3300053118 Ga0500594_0002761 Ga0500594_0002761_907_1665 250
160 3300053153 Ga0500616_0065396 Ga0500616_0065396_197_955 250
161 3300053156 Ga0500622_0000005 Ga0500622_0000005_218947_219708 250

Structural Annotation

Top 5 Hits

ID Description Score Start End
7e4n-assembly1.cif.gz_A-2 crystal structure of sat1646 0.6701 44 96
6u4u-assembly1.cif.gz_A 1.3 a structure of a pathogenic human syt 1 c2b (i368t) 0.618 133 234
6u41-assembly1.cif.gz_A 1.7 angstrom structure of a pathogenic human syt 1 c2b (d304g) 0.6065 133 234
6u4w-assembly1.cif.gz_A 1.4 a structure of a pathogenic human syt 1 c2b (d366e) 0.6059 133 243
7e4o-assembly1.cif.gz_A-2 class i pimarane-type diterpene synthases from actinomycetes 0.5911 32 96
ID Description Score Start End Superfamily
af_G4RXP2_226_371_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.6023 135 234 2.60.40.150
af_P59926_273_418_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.5968 133 243 2.60.40.150
af_Q7L8C5_150_281_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.594 133 234 2.60.40.150
af_Q9BSW7_318_470_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.5935 133 235 2.60.40.150
af_K8FE10_212_368_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.5919 133 249 2.60.40.150
ID Description Score Start End GO Terms
AF-A0A5B2VNV5-F1-model_v4 Uncharacterized protein 0.9847 36 249
AF-A0A117SDU0-F1-model_v4 Uncharacterized protein 0.9843 41 249
AF-A0A519R3C5-F1-model_v4 Uncharacterized protein 0.9755 90 249
AF-A0A3B7MIW7-F1-model_v4 DUF4469 domain-containing protein 0.9745 33 249
AF-A0A1V9EQ95-F1-model_v4 Uncharacterized protein 0.9725 32 249

Feature Viewer

pLDDT pTM Quality
88.24 0.79 High
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Predicted Structure (AlphaFold2)

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