F232425
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 159 | 122 | 155 | 414 |
Family's Representative Sequence
| Representative Sequence | 3300028379|Ga0268266_10013670|Ga0268266_100136709 |
| Length | 449 |
| Sequence | MDLERIIKPSLSAATNSLADSFDVLTVRRDFSALDQTVHGHPLVYLDNAATAQKPRCVIESLRQFYEADCANIHRGVHDLSERATTAYEDARSKVRHFINAGKHEEVVFVRGTTEAINLVAATWGRKNLHRGDEIIISTLDHHSNIVPWQILCEETGAVLRWIPINDRGELVLDEYEKLLGPRTRIVAVAHVSNTLGTITPIRRIIEMAHQVGAVALVDGAQAAPHTRIDVRALDADFYAFSGHKVFGPTGIGVLYGKYELLRSIPPYESGGGMIRSVSCAKTTYLDPPCKFEAGTPNIAGAIGLGAALDYVGKIGIDEIAAYEHRLLLHGTSALSAVPGLRIIGTPAEQAAVLPFVIGDIDPAEIGTMLDLQGIAVRTGQHCAQPVMARFGLSGTVRASFAFYNTMAEIDALADGLGRITTMFRDIVVSAHAQRSARCALAVRVESVR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2833640130 | Mariniflexile sp. TRM1-10 | Isolate | Rhizosphere |
| 2 | 2881955468 | Edaphocola flava HME-24 | Isolate | Rhizosphere |
| 3 | 2916178963 | Pseudoalteromonas rhizosphaerae RA15 | Isolate | Rhizosphere |
| 4 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 5 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 6 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 7 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 8 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 9 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 11 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 20 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 30 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 32 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 33 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 36 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 38 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 39 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 41 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 77 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 78 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 79 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 80 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 81 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 82 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 83 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 84 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 85 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 86 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 87 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 88 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 89 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 90 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 91 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 92 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 93 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 106 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 107 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 108 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 113 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 115 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 116 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 119 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 120 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 121 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 122 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.48 |
| Metatranscriptomes | 0 |
| Isolates | 2.52 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.66 |
| Nodule | 0 |
| Rhizoplane | 6.92 |
| Rhizosphere | 84.91 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.52 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10029855 | 3300001979 | Bacteria | 1784 |
| 2 | rootL2_10023730 | 3300003322 | Bacteria | 1651 |
| 3 | rootL2_10098889 | 3300003322 | Bacteria | 4310 |
| 4 | rootH1_10032533 | 3300003323 | Bacteria | 18080 |
| 5 | JGI25160J50197_1009679 | 3300003354 | Bacteria | 3551 |
| 6 | Ga0065714_10011716 | 3300005288 | Bacteria | 3064 |
| 7 | Ga0065712_10068958 | 3300005290 | Bacteria | 8464 |
| 8 | Ga0065712_10093146 | 3300005290 | Bacteria | 2304 |
| 9 | Ga0065715_10000604 | 3300005293 | Bacteria | 10117 |
| 10 | Ga0065715_10004746 | 3300005293 | Bacteria | 5208 |
| 11 | Ga0070683_100000395 | 3300005329 | Bacteria | 30161 |
| 12 | Ga0070670_100001063 | 3300005331 | Bacteria | 21793 |
| 13 | Ga0070670_100037573 | 3300005331 | Bacteria | 4166 |
| 14 | Ga0070661_100040963 | 3300005344 | Bacteria | 3379 |
| 15 | Ga0070668_100121539 | 3300005347 | Bacteria | 2088 |
| 16 | Ga0070669_100132501 | 3300005353 | Bacteria | 1914 |
| 17 | Ga0070675_100007855 | 3300005354 | Bacteria | 8268 |
| 18 | Ga0070673_100135283 | 3300005364 | Bacteria | 2074 |
| 19 | Ga0070688_100003764 | 3300005365 | Bacteria | 7861 |
| 20 | Ga0070667_100287730 | 3300005367 | Bacteria | 1477 |
| 21 | Ga0070663_100087712 | 3300005455 | Bacteria | 2300 |
| 22 | Ga0070685_10014595 | 3300005466 | Bacteria | 4163 |
| 23 | Ga0070706_100049648 | 3300005467 | Bacteria | 3871 |
| 24 | Ga0070684_100010724 | 3300005535 | Bacteria | 7273 |
| 25 | Ga0070697_100163762 | 3300005536 | Bacteria | 1880 |
| 26 | Ga0068853_100128113 | 3300005539 | Bacteria | 2269 |
| 27 | Ga0070672_100045042 | 3300005543 | Bacteria | 3410 |
| 28 | Ga0070665_100015837 | 3300005548 | Bacteria | 7570 |
| 29 | Ga0068855_100156481 | 3300005563 | Bacteria | 2589 |
| 30 | Ga0070664_100007179 | 3300005564 | Bacteria | 8982 |
| 31 | Ga0070664_100015481 | 3300005564 | Bacteria | 6239 |
| 32 | Ga0068856_100028576 | 3300005614 | Bacteria | 5446 |
| 33 | Ga0068859_100120342 | 3300005617 | Bacteria | 2692 |
| 34 | Ga0068863_100017209 | 3300005841 | Bacteria | 6933 |
| 35 | Ga0068863_100044718 | 3300005841 | Bacteria | 4202 |
| 36 | Ga0068860_100020477 | 3300005843 | Bacteria | 6406 |
| 37 | Ga0068862_100278774 | 3300005844 | Bacteria | 1531 |
| 38 | Ga0070717_10018997 | 3300006028 | Bacteria | 5382 |
| 39 | Ga0075366_10117859 | 3300006195 | Bacteria | 1599 |
| 40 | Ga0075433_10102174 | 3300006852 | Bacteria | 2539 |
| 41 | Ga0097620_100120340 | 3300006931 | Bacteria | 2692 |
| 42 | Ga0075435_100140088 | 3300007076 | Bacteria | 2029 |
| 43 | Ga0105243_10072300 | 3300009148 | Bacteria | 2791 |
| 44 | Ga0105242_10128972 | 3300009176 | Bacteria | 2180 |
| 45 | Ga0105248_10173930 | 3300009177 | Bacteria | 2427 |
| 46 | Ga0105248_10249185 | 3300009177 | Bacteria | 1999 |
| 47 | Ga0105237_10003180 | 3300009545 | Bacteria | 19703 |
| 48 | Ga0105249_10005179 | 3300009553 | Bacteria | 11251 |
| 49 | Ga0105239_10215838 | 3300010375 | Bacteria | 2151 |
| 50 | Ga0157371_10029306 | 3300013102 | Bacteria | 3982 |
| 51 | Ga0157370_10154148 | 3300013104 | Bacteria | 2138 |
| 52 | Ga0157369_10001033 | 3300013105 | Bacteria | 35163 |
| 53 | Ga0157374_10027275 | 3300013296 | Bacteria | 5149 |
| 54 | Ga0163162_10024771 | 3300013306 | Bacteria | 5927 |
| 55 | Ga0163162_10055223 | 3300013306 | Bacteria | 3997 |
| 56 | Ga0157372_10000016 | 3300013307 | Bacteria | 220177 |
| 57 | Ga0157372_10002580 | 3300013307 | Bacteria | 19628 |
| 58 | Ga0157372_10072843 | 3300013307 | Bacteria | 3871 |
| 59 | Ga0163163_10045398 | 3300014325 | Bacteria | 4312 |
| 60 | Ga0163163_10184523 | 3300014325 | Bacteria | 2134 |
| 61 | Ga0163161_10112685 | 3300017792 | Bacteria | 2035 |
| 62 | Ga0207426_1000019 | 3300025302 | Bacteria | 558579 |
| 63 | Ga0207697_10023003 | 3300025315 | Bacteria | 2552 |
| 64 | Ga0207684_10045814 | 3300025910 | Bacteria | 3709 |
| 65 | Ga0207695_10062807 | 3300025913 | Bacteria | 3832 |
| 66 | Ga0207649_10022996 | 3300025920 | Bacteria | 3605 |
| 67 | Ga0207646_10014891 | 3300025922 | Bacteria | 7367 |
| 68 | Ga0207681_10034568 | 3300025923 | Bacteria | 3325 |
| 69 | Ga0207694_10074401 | 3300025924 | Bacteria | 2659 |
| 70 | Ga0207650_10146510 | 3300025925 | Bacteria | 1860 |
| 71 | Ga0207659_10017930 | 3300025926 | Bacteria | 4633 |
| 72 | Ga0207659_10043485 | 3300025926 | Bacteria | 3155 |
| 73 | Ga0207669_10069678 | 3300025937 | Bacteria | 2202 |
| 74 | Ga0207689_10063976 | 3300025942 | Bacteria | 3027 |
| 75 | Ga0207661_10001442 | 3300025944 | Bacteria | 16036 |
| 76 | Ga0207679_10027025 | 3300025945 | Bacteria | 3964 |
| 77 | Ga0207667_10178081 | 3300025949 | Bacteria | 2184 |
| 78 | Ga0207703_10261399 | 3300026035 | Bacteria | 1565 |
| 79 | Ga0207678_10038772 | 3300026067 | Bacteria | 4138 |
| 80 | Ga0207702_10023338 | 3300026078 | Bacteria | 5130 |
| 81 | Ga0207641_10010705 | 3300026088 | Bacteria | 7522 |
| 82 | Ga0207641_10017608 | 3300026088 | Bacteria | 5850 |
| 83 | Ga0207676_10046332 | 3300026095 | Bacteria | 3364 |
| 84 | Ga0207676_10320464 | 3300026095 | Bacteria | 1423 |
| 85 | Ga0268266_10013670 | 3300028379 | Bacteria | 6990 |
| 86 | Ga0268266_10016197 | 3300028379 | Bacteria | 6374 |
| 87 | Ga0265338_10002502 | 3300028800 | Bacteria | 27371 |
| 88 | Ga0265338_10005519 | 3300028800 | Bacteria | 16487 |
| 89 | Ga0265324_10005863 | 3300029957 | Bacteria | 5224 |
| 90 | Ga0265324_10015051 | 3300029957 | Bacteria | 2849 |
| 91 | Ga0265339_10008800 | 3300031249 | Bacteria | 6393 |
| 92 | Ga0265316_10000989 | 3300031344 | Bacteria | 30846 |
| 93 | Ga0265316_10109255 | 3300031344 | Bacteria | 2096 |
| 94 | Ga0307408_100000154 | 3300031548 | Bacteria | 76673 |
| 95 | Ga0265342_10062250 | 3300031712 | Bacteria | 2197 |
| 96 | Ga0307414_10000349 | 3300032004 | Bacteria | 25834 |
| 97 | Ga0307411_10013543 | 3300032005 | Bacteria | 4503 |
| 98 | Ga0307411_10115182 | 3300032005 | Bacteria | 1933 |
| 99 | Ga0316574_0083584 | 3300035398 | Bacteria | 2030 |
| 100 | Ga0395899_0000414 | 3300037312 | Bacteria | 49488 |
| 101 | Ga0395901_0013582 | 3300038443 | Bacteria | 8282 |
| 102 | Ga0451837_0810045 | 3300041494 | Bacteria | 2086 |
| 103 | Ga0451577_0000066 | 3300042876 | Bacteria | 257650 |
| 104 | Ga0451577_0001396 | 3300042876 | Bacteria | 32348 |
| 105 | Ga0451577_0004990 | 3300042876 | Bacteria | 13754 |
| 106 | Ga0451577_0049492 | 3300042876 | Bacteria | 3753 |
| 107 | Ga0451577_0049738 | 3300042876 | Bacteria | 3742 |
| 108 | Ga0453683_0000174 | 3300044673 | Bacteria | 89378 |
| 109 | Ga0466966_0035359 | 3300044684 | Bacteria | 3227 |
| 110 | Ga0453684_0000051 | 3300044712 | Bacteria | 551033 |
| 111 | Ga0453684_0000206 | 3300044712 | Bacteria | 257650 |
| 112 | Ga0453684_0000558 | 3300044712 | Bacteria | 140560 |
| 113 | Ga0453684_0000970 | 3300044712 | Bacteria | 94484 |
| 114 | Ga0453684_0004658 | 3300044712 | Bacteria | 28488 |
| 115 | Ga0453684_0014290 | 3300044712 | Bacteria | 12727 |
| 116 | Ga0453684_0092328 | 3300044712 | Bacteria | 3733 |
| 117 | Ga0453684_0135341 | 3300044712 | Bacteria | 2951 |
| 118 | Ga0451576_0000002 | 3300045051 | Bacteria | 1670975 |
| 119 | Ga0451576_0000072 | 3300045051 | Bacteria | 257650 |
| 120 | Ga0451576_0000442 | 3300045051 | Bacteria | 94498 |
| 121 | Ga0451576_0040505 | 3300045051 | Bacteria | 4929 |
| 122 | Ga0495594_0058338 | 3300046499 | Bacteria | 2132 |
| 123 | Ga0495618_0007472 | 3300046514 | Bacteria | 6611 |
| 124 | Ga0495628_0115446 | 3300046516 | Bacteria | 2062 |
| 125 | Ga0495630_0008925 | 3300046517 | Bacteria | 7196 |
| 126 | Ga0495666_0004554 | 3300046526 | Bacteria | 7004 |
| 127 | Ga0495668_0000068 | 3300046616 | Bacteria | 176297 |
| 128 | Ga0495634_0003518 | 3300046642 | Bacteria | 12547 |
| 129 | Ga0495588_0076479 | 3300046674 | Bacteria | 1745 |
| 130 | Ga0495658_0144627 | 3300046683 | Bacteria | 1456 |
| 131 | Ga0495674_0030082 | 3300047319 | Bacteria | 4941 |
| 132 | Ga0495680_0009004 | 3300047322 | Bacteria | 9018 |
| 133 | Ga0495686_0000335 | 3300047472 | Bacteria | 77634 |
| 134 | Ga0496101_0024519 | 3300048904 | Bacteria | 4175 |
| 135 | Ga0496104_0013022 | 3300048907 | Bacteria | 7490 |
| 136 | Ga0496105_0021098 | 3300048908 | Bacteria | 5268 |
| 137 | Ga0496108_0001262 | 3300048911 | Bacteria | 19796 |
| 138 | Ga0496109_0000421 | 3300048912 | Bacteria | 37279 |
| 139 | Ga0496110_0019957 | 3300048913 | Bacteria | 5650 |
| 140 | Ga0496110_0034895 | 3300048913 | Bacteria | 4360 |
| 141 | Ga0496110_0106515 | 3300048913 | Bacteria | 2516 |
| 142 | Ga0496112_0001306 | 3300048915 | Bacteria | 18933 |
| 143 | Ga0496112_0005903 | 3300048915 | Bacteria | 10674 |
| 144 | Ga0496113_0034911 | 3300048916 | Bacteria | 3673 |
| 145 | Ga0501077_0064466 | 3300049593 | Bacteria | 2324 |
| 146 | Ga0501241_003523 | 3300049758 | Bacteria | 2956 |
| 147 | nmdc:mga0k408_112987_c1 | 3300050493 | Bacteria | 1606 |
| 148 | nmdc:mga0rr50_128072_c1 | 3300050513 | Bacteria | 2029 |
| 149 | nmdc:mga0a205_54083_c1 | 3300050515 | Bacteria | 3876 |
| 150 | Ga0500555_000415 | 3300053103 | Bacteria | 17833 |
| 151 | Ga0500562_000184 | 3300053108 | Bacteria | 16842 |
| 152 | Ga0500616_0000616 | 3300053153 | Bacteria | 43214 |
| 153 | Ga0500616_0001059 | 3300053153 | Bacteria | 28979 |
| 154 | Ga0500645_000244 | 3300053730 | Bacteria | 40643 |
| 155 | Ga0590075_024280 | 3300059424 | Bacteria | 1521 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013102 | Ga0157371_10029306 | Ga0157371_100293065 | 325 |
| 2 | 3300025924 | Ga0207694_10074401 | Ga0207694_100744014 | 343 |
| 3 | 3300038443 | Ga0395901_0013582 | Ga0395901_0013582_119_1354 | 364 |
| 4 | 3300032004 | Ga0307414_10000349 | Ga0307414_1000034914 | 383 |
| 5 | 3300035398 | Ga0316574_0083584 | Ga0316574_0083584_680_1894 | 384 |
| 6 | 3300042876 | Ga0451577_0004990 | Ga0451577_0004990_6269_7486 | 386 |
| 7 | 3300044712 | Ga0453684_0000970 | Ga0453684_0000970_73106_74323 | 386 |
| 8 | 3300045051 | Ga0451576_0000442 | Ga0451576_0000442_73120_74337 | 386 |
| 9 | 3300009553 | Ga0105249_10005179 | Ga0105249_100051798 | 387 |
| 10 | 3300013306 | Ga0163162_10024771 | Ga0163162_100247717 | 387 |
| 11 | 3300048913 | Ga0496110_0106515 | Ga0496110_0106515_204_1454 | 387 |
| 12 | 3300059424 | Ga0590075_024280 | Ga0590075_024280_316_1482 | 387 |
| 13 | 3300045051 | Ga0451576_0000002 | Ga0451576_0000002_425333_426574 | 392 |
| 14 | 3300013307 | Ga0157372_10002580 | Ga0157372_1000258014 | 395 |
| 15 | 3300042876 | Ga0451577_0049492 | Ga0451577_0049492_1041_2369 | 395 |
| 16 | 3300044712 | Ga0453684_0135341 | Ga0453684_0135341_172_1500 | 395 |
| 17 | 3300049593 | Ga0501077_0064466 | Ga0501077_0064466_903_2168 | 396 |
| 18 | 3300032005 | Ga0307411_10013543 | Ga0307411_100135434 | 397 |
| 19 | iso_pu_bacteria | 2916178963 | 2916180613 | 398 |
| 20 | 3300031344 | Ga0265316_10109255 | Ga0265316_101092552 | 399 |
| 21 | iso_pu_bacteria | 2833640130 | 2833641387 | 399 |
| 22 | 3300009148 | Ga0105243_10072300 | Ga0105243_100723003 | 402 |
| 23 | iso_pu_bacteria | 2881955468 | 2881958370 | 402 |
| 24 | 3300013104 | Ga0157370_10154148 | Ga0157370_101541482 | 403 |
| 25 | 3300031344 | Ga0265316_10000989 | Ga0265316_1000098927 | 403 |
| 26 | 3300031712 | Ga0265342_10062250 | Ga0265342_100622502 | 403 |
| 27 | 3300041494 | Ga0451837_0810045 | Ga0451837_0810045_278_1492 | 403 |
| 28 | iso_pu_bacteria | 2919437846 | 2919442035 | 403 |
| 29 | 3300042876 | Ga0451577_0000066 | Ga0451577_0000066_5436_6653 | 404 |
| 30 | 3300042876 | Ga0451577_0049738 | Ga0451577_0049738_1802_3019 | 404 |
| 31 | 3300044673 | Ga0453683_0000174 | Ga0453683_0000174_82738_83955 | 404 |
| 32 | 3300044712 | Ga0453684_0000051 | Ga0453684_0000051_419770_420987 | 404 |
| 33 | 3300044712 | Ga0453684_0000206 | Ga0453684_0000206_250998_252215 | 404 |
| 34 | 3300044712 | Ga0453684_0000558 | Ga0453684_0000558_65779_66996 | 404 |
| 35 | 3300044712 | Ga0453684_0092328 | Ga0453684_0092328_1575_2792 | 404 |
| 36 | 3300045051 | Ga0451576_0000072 | Ga0451576_0000072_250998_252215 | 404 |
| 37 | 3300045051 | Ga0451576_0040505 | Ga0451576_0040505_3279_4496 | 404 |
| 38 | 3300044712 | Ga0453684_0004658 | Ga0453684_0004658_12787_14007 | 405 |
| 39 | 3300025926 | Ga0207659_10043485 | Ga0207659_100434852 | 406 |
| 40 | 3300031548 | Ga0307408_100000154 | Ga0307408_10000015418 | 406 |
| 41 | 3300049758 | Ga0501241_003523 | Ga0501241_003523_1053_2288 | 406 |
| 42 | 3300053108 | Ga0500562_000184 | Ga0500562_000184_14820_16082 | 406 |
| 43 | 3300001979 | JGI24740J21852_10029855 | JGI24740J21852_100298552 | 407 |
| 44 | 3300003322 | rootL2_10023730 | rootL2_100237301 | 407 |
| 45 | 3300003322 | rootL2_10098889 | rootL2_100988892 | 407 |
| 46 | 3300003323 | rootH1_10032533 | rootH1_100325339 | 407 |
| 47 | 3300003354 | JGI25160J50197_1009679 | JGI25160J50197_10096792 | 407 |
| 48 | 3300005288 | Ga0065714_10011716 | Ga0065714_100117162 | 407 |
| 49 | 3300005290 | Ga0065712_10068958 | Ga0065712_100689585 | 407 |
| 50 | 3300005290 | Ga0065712_10093146 | Ga0065712_100931461 | 407 |
| 51 | 3300005293 | Ga0065715_10000604 | Ga0065715_100006047 | 407 |
| 52 | 3300005293 | Ga0065715_10004746 | Ga0065715_100047462 | 407 |
| 53 | 3300005329 | Ga0070683_100000395 | Ga0070683_10000039527 | 407 |
| 54 | 3300005331 | Ga0070670_100001063 | Ga0070670_10000106310 | 407 |
| 55 | 3300005331 | Ga0070670_100037573 | Ga0070670_1000375735 | 407 |
| 56 | 3300005344 | Ga0070661_100040963 | Ga0070661_1000409632 | 407 |
| 57 | 3300005347 | Ga0070668_100121539 | Ga0070668_1001215393 | 407 |
| 58 | 3300005353 | Ga0070669_100132501 | Ga0070669_1001325011 | 407 |
| 59 | 3300005354 | Ga0070675_100007855 | Ga0070675_1000078555 | 407 |
| 60 | 3300005364 | Ga0070673_100135283 | Ga0070673_1001352831 | 407 |
| 61 | 3300005365 | Ga0070688_100003764 | Ga0070688_1000037644 | 407 |
| 62 | 3300005367 | Ga0070667_100287730 | Ga0070667_1002877301 | 407 |
| 63 | 3300005455 | Ga0070663_100087712 | Ga0070663_1000877122 | 407 |
| 64 | 3300005466 | Ga0070685_10014595 | Ga0070685_100145952 | 407 |
| 65 | 3300005467 | Ga0070706_100049648 | Ga0070706_1000496484 | 407 |
| 66 | 3300005535 | Ga0070684_100010724 | Ga0070684_1000107243 | 407 |
| 67 | 3300005536 | Ga0070697_100163762 | Ga0070697_1001637622 | 407 |
| 68 | 3300005539 | Ga0068853_100128113 | Ga0068853_1001281132 | 407 |
| 69 | 3300005543 | Ga0070672_100045042 | Ga0070672_1000450424 | 407 |
| 70 | 3300005548 | Ga0070665_100015837 | Ga0070665_1000158373 | 407 |
| 71 | 3300005563 | Ga0068855_100156481 | Ga0068855_1001564813 | 407 |
| 72 | 3300005564 | Ga0070664_100007179 | Ga0070664_1000071792 | 407 |
| 73 | 3300005564 | Ga0070664_100015481 | Ga0070664_1000154815 | 407 |
| 74 | 3300005614 | Ga0068856_100028576 | Ga0068856_1000285763 | 407 |
| 75 | 3300005617 | Ga0068859_100120342 | Ga0068859_1001203424 | 407 |
| 76 | 3300005841 | Ga0068863_100017209 | Ga0068863_1000172093 | 407 |
| 77 | 3300005841 | Ga0068863_100044718 | Ga0068863_1000447183 | 407 |
| 78 | 3300005843 | Ga0068860_100020477 | Ga0068860_1000204775 | 407 |
| 79 | 3300005844 | Ga0068862_100278774 | Ga0068862_1002787742 | 407 |
| 80 | 3300006028 | Ga0070717_10018997 | Ga0070717_100189972 | 407 |
| 81 | 3300006195 | Ga0075366_10117859 | Ga0075366_101178592 | 407 |
| 82 | 3300006852 | Ga0075433_10102174 | Ga0075433_101021742 | 407 |
| 83 | 3300006931 | Ga0097620_100120340 | Ga0097620_1001203404 | 407 |
| 84 | 3300007076 | Ga0075435_100140088 | Ga0075435_1001400882 | 407 |
| 85 | 3300009176 | Ga0105242_10128972 | Ga0105242_101289722 | 407 |
| 86 | 3300009177 | Ga0105248_10173930 | Ga0105248_101739304 | 407 |
| 87 | 3300009177 | Ga0105248_10249185 | Ga0105248_102491852 | 407 |
| 88 | 3300009545 | Ga0105237_10003180 | Ga0105237_100031809 | 407 |
| 89 | 3300010375 | Ga0105239_10215838 | Ga0105239_102158382 | 407 |
| 90 | 3300013105 | Ga0157369_10001033 | Ga0157369_1000103332 | 407 |
| 91 | 3300013296 | Ga0157374_10027275 | Ga0157374_100272754 | 407 |
| 92 | 3300013306 | Ga0163162_10055223 | Ga0163162_100552233 | 407 |
| 93 | 3300013307 | Ga0157372_10000016 | Ga0157372_10000016102 | 407 |
| 94 | 3300013307 | Ga0157372_10072843 | Ga0157372_100728434 | 407 |
| 95 | 3300014325 | Ga0163163_10045398 | Ga0163163_100453982 | 407 |
| 96 | 3300014325 | Ga0163163_10184523 | Ga0163163_101845231 | 407 |
| 97 | 3300017792 | Ga0163161_10112685 | Ga0163161_101126852 | 407 |
| 98 | 3300025302 | Ga0207426_1000019 | Ga0207426_1000019137 | 407 |
| 99 | 3300025315 | Ga0207697_10023003 | Ga0207697_100230032 | 407 |
| 100 | 3300025910 | Ga0207684_10045814 | Ga0207684_100458142 | 407 |
| 101 | 3300025913 | Ga0207695_10062807 | Ga0207695_100628072 | 407 |
| 102 | 3300025920 | Ga0207649_10022996 | Ga0207649_100229963 | 407 |
| 103 | 3300025922 | Ga0207646_10014891 | Ga0207646_100148916 | 407 |
| 104 | 3300025923 | Ga0207681_10034568 | Ga0207681_100345683 | 407 |
| 105 | 3300025925 | Ga0207650_10146510 | Ga0207650_101465101 | 407 |
| 106 | 3300025926 | Ga0207659_10017930 | Ga0207659_100179302 | 407 |
| 107 | 3300025937 | Ga0207669_10069678 | Ga0207669_100696782 | 407 |
| 108 | 3300025942 | Ga0207689_10063976 | Ga0207689_100639762 | 407 |
| 109 | 3300025944 | Ga0207661_10001442 | Ga0207661_1000144211 | 407 |
| 110 | 3300025945 | Ga0207679_10027025 | Ga0207679_100270255 | 407 |
| 111 | 3300025949 | Ga0207667_10178081 | Ga0207667_101780812 | 407 |
| 112 | 3300026035 | Ga0207703_10261399 | Ga0207703_102613991 | 407 |
| 113 | 3300026067 | Ga0207678_10038772 | Ga0207678_100387724 | 407 |
| 114 | 3300026078 | Ga0207702_10023338 | Ga0207702_100233386 | 407 |
| 115 | 3300026088 | Ga0207641_10010705 | Ga0207641_100107054 | 407 |
| 116 | 3300026088 | Ga0207641_10017608 | Ga0207641_100176086 | 407 |
| 117 | 3300026095 | Ga0207676_10046332 | Ga0207676_100463323 | 407 |
| 118 | 3300026095 | Ga0207676_10320464 | Ga0207676_103204642 | 407 |
| 119 | 3300028379 | Ga0268266_10013670 | Ga0268266_100136709 | 407 |
| 120 | 3300028379 | Ga0268266_10016197 | Ga0268266_100161974 | 407 |
| 121 | 3300028800 | Ga0265338_10002502 | Ga0265338_1000250211 | 407 |
| 122 | 3300028800 | Ga0265338_10005519 | Ga0265338_1000551911 | 407 |
| 123 | 3300029957 | Ga0265324_10005863 | Ga0265324_100058634 | 407 |
| 124 | 3300029957 | Ga0265324_10015051 | Ga0265324_100150513 | 407 |
| 125 | 3300031249 | Ga0265339_10008800 | Ga0265339_100088004 | 407 |
| 126 | 3300032005 | Ga0307411_10115182 | Ga0307411_101151823 | 407 |
| 127 | 3300037312 | Ga0395899_0000414 | Ga0395899_0000414_35770_36993 | 407 |
| 128 | 3300042876 | Ga0451577_0001396 | Ga0451577_0001396_16442_17698 | 407 |
| 129 | 3300044684 | Ga0466966_0035359 | Ga0466966_0035359_1645_2868 | 407 |
| 130 | 3300044712 | Ga0453684_0014290 | Ga0453684_0014290_6868_8124 | 407 |
| 131 | 3300046499 | Ga0495594_0058338 | Ga0495594_0058338_186_1445 | 407 |
| 132 | 3300046514 | Ga0495618_0007472 | Ga0495618_0007472_2690_3949 | 407 |
| 133 | 3300046516 | Ga0495628_0115446 | Ga0495628_0115446_48_1304 | 407 |
| 134 | 3300046517 | Ga0495630_0008925 | Ga0495630_0008925_5643_6902 | 407 |
| 135 | 3300046526 | Ga0495666_0004554 | Ga0495666_0004554_3775_5034 | 407 |
| 136 | 3300046616 | Ga0495668_0000068 | Ga0495668_0000068_166714_167946 | 407 |
| 137 | 3300046642 | Ga0495634_0003518 | Ga0495634_0003518_7972_9231 | 407 |
| 138 | 3300046674 | Ga0495588_0076479 | Ga0495588_0076479_49_1527 | 407 |
| 139 | 3300046683 | Ga0495658_0144627 | Ga0495658_0144627_142_1401 | 407 |
| 140 | 3300047319 | Ga0495674_0030082 | Ga0495674_0030082_1346_2605 | 407 |
| 141 | 3300047322 | Ga0495680_0009004 | Ga0495680_0009004_6808_8067 | 407 |
| 142 | 3300047472 | Ga0495686_0000335 | Ga0495686_0000335_36001_37233 | 407 |
| 143 | 3300048904 | Ga0496101_0024519 | Ga0496101_0024519_2024_3268 | 407 |
| 144 | 3300048907 | Ga0496104_0013022 | Ga0496104_0013022_2546_3805 | 407 |
| 145 | 3300048908 | Ga0496105_0021098 | Ga0496105_0021098_534_1793 | 407 |
| 146 | 3300048911 | Ga0496108_0001262 | Ga0496108_0001262_17487_18746 | 407 |
| 147 | 3300048912 | Ga0496109_0000421 | Ga0496109_0000421_5161_6420 | 407 |
| 148 | 3300048913 | Ga0496110_0019957 | Ga0496110_0019957_2884_4143 | 407 |
| 149 | 3300048913 | Ga0496110_0034895 | Ga0496110_0034895_233_1477 | 407 |
| 150 | 3300048915 | Ga0496112_0001306 | Ga0496112_0001306_16622_17881 | 407 |
| 151 | 3300048915 | Ga0496112_0005903 | Ga0496112_0005903_6214_7458 | 407 |
| 152 | 3300048916 | Ga0496113_0034911 | Ga0496113_0034911_2292_3536 | 407 |
| 153 | 3300050493 | nmdc:mga0k408_112987_c1 | nmdc:mga0k408_112987_c1_35_1282 | 407 |
| 154 | 3300050513 | nmdc:mga0rr50_128072_c1 | nmdc:mga0rr50_128072_c1_225_1484 | 407 |
| 155 | 3300050515 | nmdc:mga0a205_54083_c1 | nmdc:mga0a205_54083_c1_621_1880 | 407 |
| 156 | 3300053103 | Ga0500555_000415 | Ga0500555_000415_15957_17252 | 407 |
| 157 | 3300053153 | Ga0500616_0000616 | Ga0500616_0000616_19675_20937 | 407 |
| 158 | 3300053153 | Ga0500616_0001059 | Ga0500616_0001059_6423_7655 | 407 |
| 159 | 3300053730 | Ga0500645_000244 | Ga0500645_000244_17126_18412 | 407 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4w91-assembly3.cif.gz_E | crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp | 0.9889 | 5 | 407 |
| 6c9e-assembly1.cif.gz_A | crystal structure of cysteine desulfurase from legionella pneumophila philadelphia 1 | 0.9886 | 6 | 407 |
| 6ndn-assembly1.cif.gz_A | crystal structure of selenocysteine lyase from escherichia coli | 0.9864 | 5 | 407 |
| 6o12-assembly1.cif.gz_A | e. coli cysteine desulfurase sufs h123a | 0.9856 | 5 | 407 |
| 6o11-assembly1.cif.gz_A-2 | e. coli cysteine desulfurase sufs c364a with a cys-aldimine intermediate | 0.9854 | 6 | 407 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1i29A02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9859 | 41 | 296 | 3.40.640.10 |
| af_Q2FZY5_42_298_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9826 | 38 | 293 | 3.40.640.10 |
| af_A0A368UH16_90_350_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9824 | 38 | 296 | 3.40.640.10 |
| af_Q0INV6_1_200_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9821 | 91 | 287 | 3.40.640.10 |
| 4w91J02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9768 | 35 | 296 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A515KL27-F1-model_v4 | cysteine desulfurase (EC 2.8.1.7) | 0.992 | 6 | 407 |
GO:0006534
GO:0030170 GO:0031071 |
| AF-A0A5C7RXV8-F1-model_v4 | cysteine desulfurase (EC 2.8.1.7) | 0.9903 | 6 | 401 |
GO:0006534
GO:0030170 GO:0031071 |
| AF-A0A3D4RQM7-F1-model_v4 | Cysteine desulfurase (EC 2.8.1.7) | 0.9901 | 11 | 407 |
GO:0006534
GO:0030170 GO:0031071 |
| AF-A0A6G6K960-F1-model_v4 | cysteine desulfurase (EC 2.8.1.7) | 0.99 | 1 | 401 |
GO:0006534
GO:0030170 GO:0031071 |
| AF-A0A3M1HW76-F1-model_v4 | Cysteine desulfurase (EC 2.8.1.7) | 0.99 | 5 | 407 |
GO:0006534
GO:0030170 GO:0031071 |
Predicted Structure (AlphaFold2)
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