F231766

General Info

Members Datasets Scaffolds Average Seq Length
159 112 318 269

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10069630|Ga0081455_100696303
Length 282
Sequence MAAKKFNVLPGFGLTMGFTLFYLSAIVLLPMAGLVIKTLGIPWREFWQLATTDRALAAYKLTFGASAIAALANAVFGTLLAWVLTRYEFPGRRFIDAMVDFPFALPTAVAGLTLANMFASNGWLGQFLARSHPDGKVEPITIYMPWFGVVVALTFVGMPFVVRTLQPVLESFEREVEESAATLGAGRLRTFLSVIAPTLLPSIITGFALAFARAIGEYGSIAFISGNIPFKSEIAPQLIFIRLEEFEYAGAIALAVVLMVISFGLLIVINFLEQWANKFVKG

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
56 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
57 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
60 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
68 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
69 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
70 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
71 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
72 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
73 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
77 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
78 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
81 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
82 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
83 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
97 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
105 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 2842733646 Variovorax sp. R-72446 Isolate Unclassified
109 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
110 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
111 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
112 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 96.86
Metatranscriptomes 0
Isolates 3.14

Biome Distribution

Category Percentage (%)
Aerial Root 1.89
Bulb 0
Endosphere 0.63
Nodule 0
Rhizoplane 0.63
Rhizosphere 95.6
Stem 0
Stem Tuber 0
Unclassified 2.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10069630 3300005937 Bacteria 2924
2 Ga0070690_100117377 3300005330 Bacteria 1782
3 Ga0070666_10177471 3300005335 Bacteria 1493
4 Ga0070689_100118637 3300005340 Bacteria 2111
5 Ga0070689_100650524 3300005340 Bacteria 917
6 Ga0070675_100142822 3300005354 Bacteria 2047
7 Ga0070688_100035001 3300005365 Bacteria 3048
8 Ga0070688_100268550 3300005365 Bacteria 1221
9 Ga0070694_100310264 3300005444 Bacteria 1211
10 Ga0070662_100236151 3300005457 Bacteria 1464
11 Ga0070681_10018292 3300005458 Bacteria 7005
12 Ga0070681_10299764 3300005458 Bacteria 1517
13 Ga0070681_10416499 3300005458 Bacteria 1255
14 Ga0070706_100332455 3300005467 Bacteria 1417
15 Ga0070679_100283195 3300005530 Bacteria 1610
16 Ga0070686_100003437 3300005544 Bacteria 8688
17 Ga0068855_100042630 3300005563 Bacteria 5376
18 Ga0068857_100051860 3300005577 Bacteria 3641
19 Ga0068856_100010031 3300005614 Bacteria 9198
20 Ga0068856_100118458 3300005614 Bacteria 2649
21 Ga0068859_100271775 3300005617 Bacteria 1787
22 Ga0068859_100357747 3300005617 Bacteria 1555
23 Ga0068859_100368162 3300005617 Bacteria 1532
24 Ga0068858_100160021 3300005842 Bacteria 2120
25 Ga0068862_100096692 3300005844 Unclassified 2578
26 Ga0070716_100032081 3300006173 Bacteria 2862
27 Ga0075428_100004558 3300006844 Bacteria 15326
28 Ga0075431_100474028 3300006847 Bacteria 1245
29 Ga0097620_100271756 3300006931 Bacteria 1787
30 Ga0097620_100357749 3300006931 Bacteria 1555
31 Ga0097620_100368137 3300006931 Bacteria 1532
32 Ga0075435_100112349 3300007076 Bacteria 2267
33 Ga0099794_10042975 3300007265 Bacteria 2156
34 Ga0105240_10006654 3300009093 Bacteria 16960
35 Ga0105240_10081187 3300009093 Bacteria 3985
36 Ga0105240_10257831 3300009093 Bacteria 2013
37 Ga0111539_10007972 3300009094 Bacteria 13507
38 Ga0111539_10070811 3300009094 Bacteria 4116
39 Ga0111539_10141955 3300009094 Bacteria 2811
40 Ga0105242_10693323 3300009176 Bacteria 995
41 Ga0105237_10059704 3300009545 Bacteria 3815
42 Ga0105238_10022573 3300009551 Bacteria 6414
43 Ga0105249_10447996 3300009553 Bacteria 1329
44 Ga0157370_10322402 3300013104 Bacteria 1425
45 Ga0157369_10912691 3300013105 Bacteria 901
46 Ga0157374_10117844 3300013296 Bacteria 2560
47 Ga0157378_10568973 3300013297 Bacteria 1141
48 Ga0157375_10000045 3300013308 Bacteria 151387
49 Ga0157375_10015705 3300013308 Bacteria 6783
50 Ga0157379_10179809 3300014968 Bacteria 1911
51 Ga0157376_10144063 3300014969 Bacteria 2141
52 Ga0207680_10036209 3300025903 Bacteria 2841
53 Ga0207707_10022818 3300025912 Bacteria 5473
54 Ga0207695_10038329 3300025913 Bacteria 5161
55 Ga0207695_10064037 3300025913 Bacteria 3788
56 Ga0207695_10245832 3300025913 Bacteria 1689
57 Ga0207660_10241949 3300025917 Bacteria 1422
58 Ga0207652_10059187 3300025921 Bacteria 3302
59 Ga0207652_10567097 3300025921 Bacteria 1019
60 Ga0207694_10009841 3300025924 Bacteria 7221
61 Ga0207694_10074894 3300025924 Bacteria 2649
62 Ga0207670_10214727 3300025936 Bacteria 1469
63 Ga0207670_10308820 3300025936 Bacteria 1241
64 Ga0207667_10030363 3300025949 Bacteria 5848
65 Ga0207667_10100911 3300025949 Bacteria 2977
66 Ga0207667_10468832 3300025949 Bacteria 1279
67 Ga0207651_10224556 3300025960 Bacteria 1521
68 Ga0207712_10268822 3300025961 Unclassified 1386
69 Ga0207703_10083392 3300026035 Bacteria 2671
70 Ga0207702_10043265 3300026078 Bacteria 3781
71 Ga0207676_10023076 3300026095 Bacteria 4584
72 Ga0207676_10143997 3300026095 Bacteria 2044
73 Ga0265337_1066766 3300028556 Bacteria 991
74 Ga0265338_10000008 3300028800 Bacteria 481542
75 Ga0265338_10000552 3300028800 Bacteria 65513
76 Ga0265338_10005546 3300028800 Bacteria 16423
77 Ga0265338_10009566 3300028800 Bacteria 11530
78 Ga0265338_10024259 3300028800 Bacteria 6201
79 Ga0265324_10001087 3300029957 Bacteria 16364
80 Ga0265324_10007861 3300029957 Bacteria 4279
81 Ga0265332_10084947 3300031238 Bacteria 1341
82 Ga0265328_10023816 3300031239 Bacteria 2320
83 Ga0265329_10001803 3300031242 Bacteria 10191
84 Ga0265339_10021160 3300031249 Bacteria 3789
85 Ga0265339_10148519 3300031249 Bacteria 1187
86 Ga0265314_10000206 3300031711 Bacteria 87046
87 Ga0307406_10637475 3300031901 Bacteria 883
88 Ga0373931_0230455 3300035691 Bacteria 1119
89 Ga0373931_0271502 3300035691 Bacteria 1038
90 Ga0373937_0172617 3300036401 Bacteria 2029
91 Ga0395900_0046449 3300037418 Bacteria 4472
92 Ga0395905_0050292 3300037471 Bacteria 3905
93 Ga0395901_0453629 3300038443 Bacteria 1311
94 Ga0451577_0171865 3300042876 Bacteria 1953
95 Ga0451577_0288558 3300042876 Bacteria 1487
96 Ga0451577_0311332 3300042876 Bacteria 1427
97 Ga0453684_0011911 3300044712 Bacteria 14479
98 Ga0451576_0109078 3300045051 Bacteria 2880
99 Ga0451576_0164814 3300045051 Bacteria 2313
100 Ga0451576_0201119 3300045051 Bacteria 2081
101 Ga0451576_0235793 3300045051 Bacteria 1911
102 Ga0451576_0316744 3300045051 Bacteria 1632
103 Ga0451576_0360912 3300045051 Bacteria 1522
104 Ga0451576_0466515 3300045051 Bacteria 1326
105 Ga0451576_0908566 3300045051 Bacteria 924
106 Ga0495641_0086975 3300046461 Bacteria 1399
107 Ga0495664_0216538 3300046477 Unclassified 1160
108 Ga0495608_0219981 3300046511 Bacteria 1192
109 Ga0495618_0038290 3300046514 Bacteria 3013
110 Ga0495630_0000036 3300046517 Bacteria 116547
111 Ga0495666_0001880 3300046526 Bacteria 10369
112 Ga0495640_0086362 3300046533 Bacteria 2077
113 Ga0495586_0000162 3300046535 Bacteria 43397
114 Ga0495586_0004487 3300046535 Bacteria 7455
115 Ga0495586_0166852 3300046535 Bacteria 1243
116 Ga0495645_0331713 3300046543 Bacteria 985
117 Ga0495634_0002024 3300046642 Bacteria 17245
118 Ga0495647_0070306 3300046681 Bacteria 1400
119 Ga0495613_0004795 3300046689 Bacteria 10148
120 Ga0495613_0018954 3300046689 Bacteria 5127
121 Ga0495674_0003313 3300047319 Bacteria 15649
122 Ga0495676_0000679 3300047321 Bacteria 28310
123 Ga0495680_0342344 3300047322 Bacteria 1043
124 Ga0495675_0284666 3300047444 Unclassified 985
125 Ga0496115_0019715 3300048918 Bacteria 5193
126 Ga0501032_0001802 3300049569 Bacteria 16907
127 Ga0501033_0012180 3300049570 Bacteria 6565
128 Ga0501034_0023043 3300049571 Bacteria 6345
129 Ga0501034_0360791 3300049571 Bacteria 1380
130 Ga0501034_0821509 3300049571 Bacteria 821
131 Ga0501036_0059258 3300049572 Bacteria 3244
132 Ga0501037_0011212 3300049573 Bacteria 6598
133 Ga0501039_0005344 3300049575 Bacteria 9714
134 Ga0501040_0314362 3300049576 Bacteria 1120
135 Ga0501042_0179177 3300049578 Bacteria 1529
136 Ga0501043_0004125 3300049579 Bacteria 11865
137 Ga0501046_0003189 3300049580 Bacteria 15102
138 Ga0501047_0025138 3300049581 Bacteria 5721
139 Ga0501069_0001271 3300049585 Bacteria 12347
140 Ga0501073_0005735 3300049589 Bacteria 9286
141 Ga0501074_0017771 3300049590 Bacteria 5166
142 Ga0501080_0012570 3300049742 Bacteria 7763
143 Ga0501083_0004251 3300049744 Bacteria 10081
144 Ga0501044_0032976 3300049823 Bacteria 5443
145 Ga0501044_0592641 3300049823 Bacteria 1002
146 nmdc:mga06r32_571690_c1 3300050510 Bacteria 1103
147 nmdc:mga08y16_107409_c1 3300050511 Bacteria 2905
148 nmdc:mga08y16_163619_c1 3300050511 Bacteria 2311
149 nmdc:mga08y16_258861_c1 3300050511 Bacteria 1797
150 nmdc:mga08y16_7173_c1 3300050511 Bacteria 11695
151 nmdc:mga0rr50_132079_c1 3300050513 Bacteria 2000
152 Ga0500573_0000113 3300053140 Bacteria 33109
153 Ga0501084_0085990 3300054114 Bacteria 2640
154 Ga0501082_0034514 3300060353 Bacteria 4360
155 2842735033 2842733646 Bacteria 5716726
156 2928027788 2928027323 Bacteria 4382488
157 2984557919 2984555340 Bacteria 4247089
158 2984567716 2984564862 Bacteria 4339992
159 2993358767 2993356040 Bacteria 4247105
160 Ga0081455_10069630
161 Ga0070690_100117377
162 Ga0070666_10177471
163 Ga0070689_100118637
164 Ga0070689_100650524
165 Ga0070675_100142822
166 Ga0070688_100035001
167 Ga0070688_100268550
168 Ga0070694_100310264
169 Ga0070662_100236151
170 Ga0070681_10018292
171 Ga0070681_10299764
172 Ga0070681_10416499
173 Ga0070706_100332455
174 Ga0070679_100283195
175 Ga0070686_100003437
176 Ga0068855_100042630
177 Ga0068857_100051860
178 Ga0068856_100010031
179 Ga0068856_100118458
180 Ga0068859_100271775
181 Ga0068859_100357747
182 Ga0068859_100368162
183 Ga0068858_100160021
184 Ga0068862_100096692
185 Ga0070716_100032081
186 Ga0075428_100004558
187 Ga0075431_100474028
188 Ga0097620_100271756
189 Ga0097620_100357749
190 Ga0097620_100368137
191 Ga0075435_100112349
192 Ga0099794_10042975
193 Ga0105240_10006654
194 Ga0105240_10081187
195 Ga0105240_10257831
196 Ga0111539_10007972
197 Ga0111539_10070811
198 Ga0111539_10141955
199 Ga0105242_10693323
200 Ga0105237_10059704
201 Ga0105238_10022573
202 Ga0105249_10447996
203 Ga0157370_10322402
204 Ga0157369_10912691
205 Ga0157374_10117844
206 Ga0157378_10568973
207 Ga0157375_10000045
208 Ga0157375_10015705
209 Ga0157379_10179809
210 Ga0157376_10144063
211 Ga0207680_10036209
212 Ga0207707_10022818
213 Ga0207695_10038329
214 Ga0207695_10064037
215 Ga0207695_10245832
216 Ga0207660_10241949
217 Ga0207652_10059187
218 Ga0207652_10567097
219 Ga0207694_10009841
220 Ga0207694_10074894
221 Ga0207670_10214727
222 Ga0207670_10308820
223 Ga0207667_10030363
224 Ga0207667_10100911
225 Ga0207667_10468832
226 Ga0207651_10224556
227 Ga0207712_10268822
228 Ga0207703_10083392
229 Ga0207702_10043265
230 Ga0207676_10023076
231 Ga0207676_10143997
232 Ga0265337_1066766
233 Ga0265338_10000008
234 Ga0265338_10000552
235 Ga0265338_10005546
236 Ga0265338_10009566
237 Ga0265338_10024259
238 Ga0265324_10001087
239 Ga0265324_10007861
240 Ga0265332_10084947
241 Ga0265328_10023816
242 Ga0265329_10001803
243 Ga0265339_10021160
244 Ga0265339_10148519
245 Ga0265314_10000206
246 Ga0307406_10637475
247 Ga0373931_0230455
248 Ga0373931_0271502
249 Ga0373937_0172617
250 Ga0395900_0046449
251 Ga0395905_0050292
252 Ga0395901_0453629
253 Ga0451577_0171865
254 Ga0451577_0288558
255 Ga0451577_0311332
256 Ga0453684_0011911
257 Ga0451576_0109078
258 Ga0451576_0164814
259 Ga0451576_0201119
260 Ga0451576_0235793
261 Ga0451576_0316744
262 Ga0451576_0360912
263 Ga0451576_0466515
264 Ga0451576_0908566
265 Ga0495641_0086975
266 Ga0495664_0216538
267 Ga0495608_0219981
268 Ga0495618_0038290
269 Ga0495630_0000036
270 Ga0495666_0001880
271 Ga0495640_0086362
272 Ga0495586_0000162
273 Ga0495586_0004487
274 Ga0495586_0166852
275 Ga0495645_0331713
276 Ga0495634_0002024
277 Ga0495647_0070306
278 Ga0495613_0004795
279 Ga0495613_0018954
280 Ga0495674_0003313
281 Ga0495676_0000679
282 Ga0495680_0342344
283 Ga0495675_0284666
284 Ga0496115_0019715
285 Ga0501032_0001802
286 Ga0501033_0012180
287 Ga0501034_0023043
288 Ga0501034_0360791
289 Ga0501034_0821509
290 Ga0501036_0059258
291 Ga0501037_0011212
292 Ga0501039_0005344
293 Ga0501040_0314362
294 Ga0501042_0179177
295 Ga0501043_0004125
296 Ga0501046_0003189
297 Ga0501047_0025138
298 Ga0501069_0001271
299 Ga0501073_0005735
300 Ga0501074_0017771
301 Ga0501080_0012570
302 Ga0501083_0004251
303 Ga0501044_0032976
304 Ga0501044_0592641
305 nmdc:mga06r32_571690_c1
306 nmdc:mga08y16_107409_c1
307 nmdc:mga08y16_163619_c1
308 nmdc:mga08y16_258861_c1
309 nmdc:mga08y16_7173_c1
310 nmdc:mga0rr50_132079_c1
311 Ga0500573_0000113
312 Ga0501084_0085990
313 Ga0501082_0034514
314 2842735033
315 2928027788
316 2984557919
317 2984567716
318 2993358767

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

73

278

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.8992 17 262
2onk-assembly2.cif.gz_I abc transporter modbc in complex with its binding protein moda 0.8903 19 263
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.8724 17 262
8hpl-assembly1.cif.gz_A lpqy-sugabc in state 1 0.8683 19 262
8ja7-assembly1.cif.gz_A cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.8627 19 262
ID Description Score Start End Superfamily
af_P16701_14_273_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9457 17 271 1.10.3720.10
af_P16701_14_273_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9249 17 271 1.10.3720.10
af_P71745_27_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.923 17 271 1.10.3720.10
af_P0AEB0_20_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9168 17 274 1.10.3720.10
af_P0AF01_2_224_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9165 52 269 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A401TWW1-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9615 33 248 GO:0005886
GO:0015419
AF-A0A655X864-F1-model_v4 deleted 0.9576 56 272
AF-A0A3S4E3F1-F1-model_v4 deleted 0.957 38 267
AF-A9B6K6-F1-model_v4 Sulfate ABC transporter, inner membrane subunit 0.9538 17 271 GO:0005886
GO:0015419
AF-A0A645GG48-F1-model_v4 Sulfate transport system permease protein CysT 0.9534 62 272 GO:0005886
GO:0015419

Map