F230813

General Info

Members Datasets Scaffolds Average Seq Length
158 124 134 399

Family's Representative Sequence

Representative Sequence 3300053136|Ga0500559_0014383|Ga0500559_0014383_1172_2335
Length 366
Sequence MASGRPDLGEVLDGVLACRDGCIVYAGPLAQSPSLDADESINCEGRWITPGLIDCHTHLVYGGDRAAEFEARLAGASYEEIARAGGGIVSTMAATRAASHDDLVSSALPRLDALIAEGVTTLEIKSGYGLSLADERKQLRAARALGQARDVTIATTLLGAHALPPEFAGDPDGYIDMVCGEMIPAIAAEGLADAVDAFCEGIGFSTAQTRRVFEAARAHGLPVKLHAEQLSNLQGASLAAEFGALSADLLPGAFYFVRETKLPPVEQLRRHNVPMALATDCNPGTAPLTSLLLTMNMAATLFRLTVSECLTGVTREAARALGLDAETGTLEIGKRCDLAIWNIERPAELVYRMGFNPLHKRVWGGL

Samples

Sample ID Description Type Environment
1 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
2 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
3 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
4 2547132181 Kosakonia sacchari SP1 Isolate Stem
5 2561511199 Enterobacter sp. R4-368 Isolate Nodule
6 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
7 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
8 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
9 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
10 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
11 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
12 2849560528 Caulobacter zeae 410 Isolate Unclassified
13 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
14 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
15 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
16 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
17 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
18 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
19 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
20 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
21 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
22 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
23 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
24 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
25 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
26 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
27 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
31 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
71 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
77 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
80 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
81 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
84 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
85 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
86 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
87 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
106 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
107 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
108 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
116 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
117 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
118 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
119 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
120 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
124 8054558443 Rhizobium alarense TRM95111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.81
Metatranscriptomes 0
Isolates 15.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.13
Nodule 5.7
Rhizoplane 1.27
Rhizosphere 65.82
Stem 0.63
Stem Tuber 0
Unclassified 16.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24749J21850_1000691 3300002076 Bacteria 4854
2 JGI24751J29686_10001242 3300002459 Bacteria 5384
3 JGI25151J46595_10019773 3300003187 Bacteria 2852
4 JGI25406J46586_10020516 3300003203 Bacteria 2671
5 Ga0055526_1001056 3300003771 Bacteria 20118
6 Ga0065165_1001233 3300005262 Bacteria 29262
7 Ga0070670_100000005 3300005331 Bacteria 351569
8 Ga0070668_100080354 3300005347 Bacteria 2554
9 Ga0070667_100000672 3300005367 Bacteria 33160
10 Ga0070700_100111601 3300005441 Bacteria 1819
11 Ga0070681_10023417 3300005458 Bacteria 6209
12 Ga0070665_100135815 3300005548 Bacteria 2462
13 Ga0068864_100000011 3300005618 Bacteria 350056
14 Ga0068861_100012010 3300005719 Bacteria 6033
15 Ga0068860_100286370 3300005843 Bacteria 1611
16 Ga0068862_100000011 3300005844 Bacteria 270105
17 Ga0081455_10011821 3300005937 Bacteria 8741
18 Ga0081539_10000001 3300005985 Bacteria 808331
19 Ga0075365_10058253 3300006038 Bacteria 2572
20 Ga0075369_10054749 3300006186 Bacteria 1732
21 Ga0075431_100009174 3300006847 Bacteria 9921
22 Ga0079104_1000102 3300006946 Bacteria 124752
23 Ga0105240_10019678 3300009093 Bacteria 9016
24 Ga0105238_10068072 3300009551 Bacteria 3561
25 Ga0163162_10016699 3300013306 Bacteria 7176
26 Ga0157375_10160788 3300013308 Bacteria 2387
27 Ga0157380_10000031 3300014326 Bacteria 90245
28 Ga0157380_10145892 3300014326 Bacteria 2039
29 Ga0213872_10077910 3300021361 Bacteria 1490
30 Ga0209025_1000188 3300025294 Bacteria 154209
31 Ga0209564_1000019 3300025295 Bacteria 573686
32 Ga0209564_1001331 3300025295 Bacteria 26417
33 Ga0209758_1010906 3300025297 Bacteria 5354
34 Ga0209256_1000182 3300025299 Bacteria 122471
35 Ga0207695_10031618 3300025913 Bacteria 5802
36 Ga0207650_10000018 3300025925 Bacteria 352120
37 Ga0207711_10002975 3300025941 Bacteria 14809
38 Ga0207668_10059600 3300025972 Bacteria 2675
39 Ga0207658_10001923 3300025986 Bacteria 15501
40 Ga0207648_10190756 3300026089 Bacteria 1816
41 Ga0207676_10000004 3300026095 Bacteria 725417
42 Ga0207675_100015879 3300026118 Bacteria 7023
43 Ga0209281_1000124 3300027111 Bacteria 202831
44 Ga0268266_10036255 3300028379 Bacteria 4197
45 Ga0268265_10000002 3300028380 Bacteria 1035381
46 Ga0307515_10200138 3300028794 Bacteria 1876
47 Ga0307513_10022452 3300031456 Bacteria 7417
48 Ga0373937_0021415 3300036401 Bacteria 5804
49 Ga0237819_00773 3300038705 Bacteria 10229
50 Ga0439443_011018 3300042003 Bacteria 1319
51 Ga0466957_0089848 3300044842 Bacteria 1923
52 Ga0495627_005103 3300046453 Bacteria 5364
53 Ga0495638_0068720 3300046460 Bacteria 2172
54 Ga0495645_0127858 3300046543 Bacteria 1784
55 Ga0495589_0018808 3300046794 Bacteria 3541
56 Ga0495673_0000091 3300047469 Bacteria 187985
57 Ga0496102_0000284 3300048905 Bacteria 64681
58 Ga0496103_0000176 3300048906 Bacteria 65606
59 Ga0496116_0002314 3300048919 Bacteria 20195
60 Ga0496117_0000501 3300048920 Bacteria 64696
61 Ga0496117_0005474 3300048920 Bacteria 13306
62 Ga0496118_0000503 3300048921 Bacteria 64696
63 Ga0496120_0136764 3300048923 Bacteria 1248
64 Ga0496122_0002521 3300048925 Bacteria 25794
65 Ga0496123_0000544 3300048926 Bacteria 64764
66 Ga0496124_0000534 3300048927 Bacteria 64668
67 Ga0496124_0001589 3300048927 Bacteria 32712
68 Ga0496125_0000372 3300048928 Bacteria 84272
69 Ga0496126_0000823 3300048929 Bacteria 55212
70 Ga0496126_0002969 3300048929 Bacteria 22027
71 Ga0501032_0110625 3300049569 Bacteria 1818
72 Ga0501033_0000272 3300049570 Bacteria 49989
73 Ga0501033_0045200 3300049570 Bacteria 3278
74 Ga0501034_0127256 3300049571 Bacteria 2532
75 Ga0501036_0062958 3300049572 Bacteria 3141
76 Ga0501036_0107007 3300049572 Bacteria 2365
77 Ga0501037_0001027 3300049573 Bacteria 20627
78 Ga0501037_0036740 3300049573 Bacteria 3609
79 Ga0501038_0019146 3300049574 Bacteria 6174
80 Ga0501038_0019345 3300049574 Bacteria 6141
81 Ga0501043_0000003 3300049579 Bacteria 318844
82 Ga0501043_0032314 3300049579 Bacteria 4114
83 Ga0501046_0056001 3300049580 Bacteria 3096
84 Ga0501047_0084491 3300049581 Bacteria 3051
85 Ga0501048_0016273 3300049582 Bacteria 5482
86 Ga0501067_0094984 3300049583 Bacteria 1655
87 Ga0501067_0125604 3300049583 Bacteria 1428
88 Ga0501068_0000308 3300049584 Bacteria 24470
89 Ga0501068_0013789 3300049584 Bacteria 4605
90 Ga0501068_0032634 3300049584 Bacteria 3096
91 Ga0501069_0000002 3300049585 Bacteria 269636
92 Ga0501069_0004353 3300049585 Bacteria 7308
93 Ga0501070_0000051 3300049586 Bacteria 101897
94 Ga0501070_0002330 3300049586 Bacteria 16671
95 Ga0501070_0142173 3300049586 Bacteria 1981
96 Ga0501070_0175689 3300049586 Bacteria 1763
97 Ga0501071_0005885 3300049587 Bacteria 7927
98 Ga0501071_0013046 3300049587 Bacteria 5654
99 Ga0501072_0022097 3300049588 Bacteria 4935
100 Ga0501072_0076325 3300049588 Bacteria 2651
101 Ga0501073_0000671 3300049589 Bacteria 24036
102 Ga0501073_0108612 3300049589 Bacteria 1925
103 Ga0501074_0000032 3300049590 Bacteria 65565
104 Ga0501074_0000926 3300049590 Bacteria 18838
105 Ga0501074_0053488 3300049590 Bacteria 2912
106 Ga0501076_0019072 3300049592 Bacteria 5234
107 Ga0501077_0019937 3300049593 Bacteria 4242
108 Ga0501079_0042505 3300049741 Bacteria 3508
109 Ga0501080_0000286 3300049742 Bacteria 38272
110 Ga0501080_0002630 3300049742 Bacteria 15715
111 Ga0501080_0068677 3300049742 Bacteria 3296
112 Ga0501080_0089681 3300049742 Bacteria 2856
113 Ga0501083_0003195 3300049744 Bacteria 11411
114 Ga0501083_0003828 3300049744 Bacteria 10567
115 Ga0501083_0020818 3300049744 Bacteria 4560
116 Ga0501035_0000200 3300049822 Bacteria 73015
117 Ga0501035_0002198 3300049822 Bacteria 19362
118 Ga0501035_0032616 3300049822 Bacteria 4737
119 Ga0501044_0000161 3300049823 Bacteria 83309
120 Ga0501044_0026435 3300049823 Bacteria 6141
121 Ga0501044_0029715 3300049823 Bacteria 5762
122 Ga0501044_0117800 3300049823 Bacteria 2659
123 Ga0501045_0030110 3300049824 Bacteria 3927
124 nmdc:mga0yw44_15367_c1 3300050492 Bacteria 4097
125 Ga0500658_0041566 3300053134 Bacteria 1844
126 Ga0500559_0014383 3300053136 Bacteria 3344
127 Ga0500616_0003632 3300053153 Bacteria 11597
128 Ga0500622_0007686 3300053156 Bacteria 6094
129 Ga0500611_001543 3300053727 Bacteria 2564
130 Ga0501084_0062168 3300054114 Bacteria 3126
131 Ga0501084_0063114 3300054114 Bacteria 3101
132 Ga0501082_0008038 3300060353 Bacteria 9105
133 Ga0501082_0014265 3300060353 Bacteria 6838
134 Ga0530510_0072714 3300061734 Bacteria 2496

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2906354277 2906354757 347
2 3300049583 Ga0501067_0125604 Ga0501067_0125604_342_1412 354
3 3300053136 Ga0500559_0014383 Ga0500559_0014383_1172_2335 364
4 3300047469 Ga0495673_0000091 Ga0495673_0000091_20820_21959 378
5 3300049569 Ga0501032_0110625 Ga0501032_0110625_158_1357 378
6 3300049570 Ga0501033_0045200 Ga0501033_0045200_895_2094 378
7 3300049585 Ga0501069_0004353 Ga0501069_0004353_3565_4764 378
8 3300049586 Ga0501070_0002330 Ga0501070_0002330_1283_2482 378
9 3300049822 Ga0501035_0002198 Ga0501035_0002198_2386_3585 378
10 3300049823 Ga0501044_0029715 Ga0501044_0029715_3586_4785 378
11 3300054114 Ga0501084_0062168 Ga0501084_0062168_1204_2403 378
12 3300053134 Ga0500658_0041566 Ga0500658_0041566_14_1156 380
13 3300049581 Ga0501047_0084491 Ga0501047_0084491_1842_3041 381
14 3300005441 Ga0070700_100111601 Ga0070700_1001116012 385
15 3300014326 Ga0157380_10000031 Ga0157380_1000003186 385
16 3300014326 Ga0157380_10145892 Ga0157380_101458921 385
17 3300026089 Ga0207648_10190756 Ga0207648_101907562 385
18 3300042003 Ga0439443_011018 Ga0439443_011018_14_1171 385
19 3300048905 Ga0496102_0000284 Ga0496102_0000284_49631_50788 385
20 3300048906 Ga0496103_0000176 Ga0496103_0000176_13888_15045 385
21 3300048919 Ga0496116_0002314 Ga0496116_0002314_10858_12015 385
22 3300048920 Ga0496117_0000501 Ga0496117_0000501_13909_15066 385
23 3300048921 Ga0496118_0000503 Ga0496118_0000503_49631_50788 385
24 3300048923 Ga0496120_0136764 Ga0496120_0136764_66_1223 385
25 3300048927 Ga0496124_0000534 Ga0496124_0000534_49631_50788 385
26 3300048929 Ga0496126_0000823 Ga0496126_0000823_27166_28326 385
27 3300049584 Ga0501068_0000308 Ga0501068_0000308_2452_3612 385
28 3300049587 Ga0501071_0013046 Ga0501071_0013046_2565_3725 385
29 3300049589 Ga0501073_0000671 Ga0501073_0000671_7537_8697 385
30 3300049590 Ga0501074_0000926 Ga0501074_0000926_1952_3112 385
31 3300049592 Ga0501076_0019072 Ga0501076_0019072_108_1268 385
32 3300049593 Ga0501077_0019937 Ga0501077_0019937_1862_3022 385
33 3300049742 Ga0501080_0002630 Ga0501080_0002630_12824_13984 385
34 3300049744 Ga0501083_0020818 Ga0501083_0020818_2391_3551 385
35 3300053156 Ga0500622_0007686 Ga0500622_0007686_2003_3166 385
36 3300054114 Ga0501084_0063114 Ga0501084_0063114_945_2105 385
37 3300061734 Ga0530510_0072714 Ga0530510_0072714_34_1194 385
38 3300044842 Ga0466957_0089848 Ga0466957_0089848_396_1565 387
39 3300006186 Ga0075369_10054749 Ga0075369_100547492 390
40 iso_pu_bacteria 2547132181 2547697379 391
41 iso_pu_bacteria 2561511199 2562463665 391
42 iso_pu_bacteria 2811995292 2813726913 391
43 iso_pu_bacteria 2889790730 2889795267 393
44 3300006946 Ga0079104_1000102 Ga0079104_100010297 395
45 3300027111 Ga0209281_1000124 Ga0209281_1000124166 395
46 iso_pu_bacteria 2510917020 2511123391 395
47 iso_pu_bacteria 2643221552 2643783281 395
48 iso_pu_bacteria 2791355048 2792460269 395
49 iso_pu_bacteria 2843744320 2843746840 395
50 iso_pu_bacteria 2849560528 2849560914 395
51 iso_pu_bacteria 2898329390 2898333265 395
52 3300038705 Ga0237819_00773 Ga0237819_00773_5792_7000 396
53 3300049570 Ga0501033_0000272 Ga0501033_0000272_38334_39548 396
54 3300049573 Ga0501037_0001027 Ga0501037_0001027_4160_5374 396
55 3300049574 Ga0501038_0019146 Ga0501038_0019146_646_1860 396
56 3300049579 Ga0501043_0000003 Ga0501043_0000003_267795_269009 396
57 3300049584 Ga0501068_0013789 Ga0501068_0013789_2854_4068 396
58 3300049585 Ga0501069_0000002 Ga0501069_0000002_31909_33123 396
59 3300049586 Ga0501070_0000051 Ga0501070_0000051_94818_96032 396
60 3300049586 Ga0501070_0175689 Ga0501070_0175689_426_1679 396
61 3300049587 Ga0501071_0005885 Ga0501071_0005885_2078_3292 396
62 3300049588 Ga0501072_0022097 Ga0501072_0022097_1795_3048 396
63 3300049589 Ga0501073_0108612 Ga0501073_0108612_141_1355 396
64 3300049590 Ga0501074_0000032 Ga0501074_0000032_31863_33077 396
65 3300049590 Ga0501074_0053488 Ga0501074_0053488_169_1368 396
66 3300049742 Ga0501080_0000286 Ga0501080_0000286_12734_13948 396
67 3300049742 Ga0501080_0068677 Ga0501080_0068677_1161_2414 396
68 3300049744 Ga0501083_0003195 Ga0501083_0003195_10113_11327 396
69 3300049822 Ga0501035_0000200 Ga0501035_0000200_49687_50901 396
70 3300049823 Ga0501044_0000161 Ga0501044_0000161_33081_34295 396
71 iso_pu_bacteria 2524023250 2524612424 396
72 3300005937 Ga0081455_10011821 Ga0081455_100118214 397
73 iso_pu_bacteria 2889033259 2889038419 397
74 iso_pu_bacteria 2903748898 2903755408 397
75 iso_pu_bacteria 2906660503 2906667204 397
76 iso_pu_bacteria 3005506211 3005508167 397
77 3300002076 JGI24749J21850_1000691 JGI24749J21850_10006914 399
78 3300002459 JGI24751J29686_10001242 JGI24751J29686_100012422 399
79 3300003187 JGI25151J46595_10019773 JGI25151J46595_100197732 399
80 3300003203 JGI25406J46586_10020516 JGI25406J46586_100205162 399
81 3300003771 Ga0055526_1001056 Ga0055526_10010564 399
82 3300005262 Ga0065165_1001233 Ga0065165_100123320 399
83 3300005331 Ga0070670_100000005 Ga0070670_100000005229 399
84 3300005347 Ga0070668_100080354 Ga0070668_1000803542 399
85 3300005367 Ga0070667_100000672 Ga0070667_10000067210 399
86 3300005458 Ga0070681_10023417 Ga0070681_100234172 399
87 3300005548 Ga0070665_100135815 Ga0070665_1001358152 399
88 3300005618 Ga0068864_100000011 Ga0068864_100000011227 399
89 3300005719 Ga0068861_100012010 Ga0068861_1000120104 399
90 3300005843 Ga0068860_100286370 Ga0068860_1002863702 399
91 3300005844 Ga0068862_100000011 Ga0068862_1000000115 399
92 3300005985 Ga0081539_10000001 Ga0081539_1000000173 399
93 3300006038 Ga0075365_10058253 Ga0075365_100582532 399
94 3300006847 Ga0075431_100009174 Ga0075431_1000091747 399
95 3300009093 Ga0105240_10019678 Ga0105240_100196786 399
96 3300009551 Ga0105238_10068072 Ga0105238_100680722 399
97 3300013306 Ga0163162_10016699 Ga0163162_100166994 399
98 3300013308 Ga0157375_10160788 Ga0157375_101607882 399
99 3300021361 Ga0213872_10077910 Ga0213872_100779102 399
100 3300025294 Ga0209025_1000188 Ga0209025_100018827 399
101 3300025295 Ga0209564_1000019 Ga0209564_1000019289 399
102 3300025295 Ga0209564_1001331 Ga0209564_100133116 399
103 3300025297 Ga0209758_1010906 Ga0209758_10109063 399
104 3300025299 Ga0209256_1000182 Ga0209256_100018260 399
105 3300025913 Ga0207695_10031618 Ga0207695_100316182 399
106 3300025925 Ga0207650_10000018 Ga0207650_10000018227 399
107 3300025941 Ga0207711_10002975 Ga0207711_100029759 399
108 3300025972 Ga0207668_10059600 Ga0207668_100596002 399
109 3300025986 Ga0207658_10001923 Ga0207658_1000192310 399
110 3300026095 Ga0207676_10000004 Ga0207676_10000004620 399
111 3300026118 Ga0207675_100015879 Ga0207675_1000158793 399
112 3300028379 Ga0268266_10036255 Ga0268266_100362552 399
113 3300028380 Ga0268265_10000002 Ga0268265_10000002446 399
114 3300028794 Ga0307515_10200138 Ga0307515_102001381 399
115 3300031456 Ga0307513_10022452 Ga0307513_100224525 399
116 3300036401 Ga0373937_0021415 Ga0373937_0021415_738_2003 399
117 3300046453 Ga0495627_005103 Ga0495627_005103_2537_3745 399
118 3300046460 Ga0495638_0068720 Ga0495638_0068720_242_1447 399
119 3300046543 Ga0495645_0127858 Ga0495645_0127858_167_1372 399
120 3300046794 Ga0495589_0018808 Ga0495589_0018808_1893_3116 399
121 3300048920 Ga0496117_0005474 Ga0496117_0005474_8949_10172 399
122 3300048925 Ga0496122_0002521 Ga0496122_0002521_15316_16539 399
123 3300048926 Ga0496123_0000544 Ga0496123_0000544_49194_50417 399
124 3300048927 Ga0496124_0001589 Ga0496124_0001589_20207_21430 399
125 3300048928 Ga0496125_0000372 Ga0496125_0000372_68520_69743 399
126 3300048929 Ga0496126_0002969 Ga0496126_0002969_2832_4055 399
127 3300049571 Ga0501034_0127256 Ga0501034_0127256_835_2100 399
128 3300049572 Ga0501036_0062958 Ga0501036_0062958_236_1468 399
129 3300049572 Ga0501036_0107007 Ga0501036_0107007_647_1912 399
130 3300049573 Ga0501037_0036740 Ga0501037_0036740_1535_2767 399
131 3300049574 Ga0501038_0019345 Ga0501038_0019345_2585_3817 399
132 3300049579 Ga0501043_0032314 Ga0501043_0032314_2578_3810 399
133 3300049580 Ga0501046_0056001 Ga0501046_0056001_1560_2792 399
134 3300049582 Ga0501048_0016273 Ga0501048_0016273_97_1329 399
135 3300049583 Ga0501067_0094984 Ga0501067_0094984_385_1587 399
136 3300049584 Ga0501068_0032634 Ga0501068_0032634_442_1674 399
137 3300049586 Ga0501070_0142173 Ga0501070_0142173_325_1527 399
138 3300049588 Ga0501072_0076325 Ga0501072_0076325_301_1503 399
139 3300049741 Ga0501079_0042505 Ga0501079_0042505_1781_2983 399
140 3300049742 Ga0501080_0089681 Ga0501080_0089681_1359_2591 399
141 3300049744 Ga0501083_0003828 Ga0501083_0003828_6580_7800 399
142 3300049822 Ga0501035_0032616 Ga0501035_0032616_921_2153 399
143 3300049823 Ga0501044_0026435 Ga0501044_0026435_2325_3557 399
144 3300049823 Ga0501044_0117800 Ga0501044_0117800_284_1516 399
145 3300049824 Ga0501045_0030110 Ga0501045_0030110_891_2123 399
146 3300050492 nmdc:mga0yw44_15367_c1 nmdc:mga0yw44_15367_c1_1865_3070 399
147 3300053153 Ga0500616_0003632 Ga0500616_0003632_7598_8899 399
148 3300053727 Ga0500611_001543 Ga0500611_001543_458_1726 399
149 3300060353 Ga0501082_0008038 Ga0501082_0008038_4339_5559 399
150 3300060353 Ga0501082_0014265 Ga0501082_0014265_19_1275 399
151 iso_pu_bacteria 2509276022 2509397524 399
152 iso_pu_bacteria 2643221550 2643773511 399
153 iso_pu_bacteria 2802428863 2802748745 399
154 iso_pu_bacteria 2874123672 2874131127 399
155 iso_pu_bacteria 2891373044 2891377179 399
156 iso_pu_bacteria 2989349275 2989354007 399
157 iso_pu_bacteria 3003665799 3003666427 399
158 iso_pu_bacteria 8054558443 8054558956 399

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07969

Amidohydro_3

Amidohydrolase family

252

351

0.88

PF01979

Amidohydro_1

Amidohydrolase family

255

357

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2puz-assembly1.cif.gz_B crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate 0.9853 5 399
2puz-assembly1.cif.gz_B crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l-glutamate 0.9731 5 399
2oof-assembly1.cif.gz_A the crystal structure of 4-imidazolone-5-propanoate amidohydrolase from environmental sample 0.9704 3 399
2oof-assembly1.cif.gz_A the crystal structure of 4-imidazolone-5-propanoate amidohydrolase from environmental sample 0.9632 3 399
2g3f-assembly1.cif.gz_A crystal structure of imidazolonepropionase complexed with imidazole-4-acetic acid sodium salt, a substrate homologue 0.9544 2 398
ID Description Score Start End Superfamily
2q09A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9857 63 361 3.20.20.140
2q09A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9824 63 361 3.20.20.140
2g3fA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9684 63 361 3.20.20.140
2g3fA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9652 63 361 3.20.20.140
af_Q22419_88_385_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9599 63 357 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A2P7P1B7-F1-model_v4 deleted 0.9974 249 331
AF-A0A212DKB4-F1-model_v4 deleted 0.9973 309 399
AF-A0A355H8L5-F1-model_v4 imidazolonepropionase (EC 3.5.2.7) 0.9971 283 384 GO:0005737
GO:0019556
GO:0046872
GO:0050480
AF-A0A530BVQ0-F1-model_v4 imidazolonepropionase (EC 3.5.2.7) 0.9968 284 399 GO:0005737
GO:0019556
GO:0046872
GO:0050480
AF-A0A527A5P1-F1-model_v4 Imidazolonepropionase 0.9967 302 399 GO:0005737
GO:0019556
GO:0046872
GO:0050480

Feature Viewer

pLDDT pTM Quality
95.63 0.94 High
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Predicted Structure (AlphaFold2)

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