F230781

General Info

Members Datasets Scaffolds Average Seq Length
158 119 316 368

Family's Representative Sequence

Representative Sequence 3300050515|nmdc:mga0a205_281178_c1|nmdc:mga0a205_281178_c1_44_1405
Length 453
Sequence MLLHGPRVVDRLAVEVRQLAASDGRRHVSRQGDVHGAQAYAASGCERSAIHSRKRAGGFTGARRSAPLLNDAGEPGATISAVPDTGLTVVGAGVVGLAIAARLAPDIPNLVVLERNPAGGMETSSRNSEVIHAGIYYSAGSLKARLCVEGNRRIYELCGRHAIPHRRTGKIITASDEGERAELDRLLAQGLGNGVALRMISASEARGLEPALRSSGALLSPDSGIVSAHGLMDHLLGKARDAGAILQWRSELVAIERRAGDYQLTVRSGQATESFTSERVVNAAGLHADTVAALAGIDADAAGYRLHYCKGSYFSIAPSRMGLVSRLVYPVPGPVSLGVHAVLDLAGRLKFGPDVEYLPDRRLDYGVDETKRAAFGEAVRRMLPSVRDEDLSPDMSGIRAKLQGPGDPYRDFVITEESRRGLPGFVNLVGIDSPGLTSALAIAEHVAGLLEGR

Samples

Sample ID Description Type Environment
1 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
43 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
65 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
66 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
78 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
79 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
87 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
98 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
109 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
110 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
111 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
114 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
115 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
116 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
117 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
118 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
119 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.06
Nodule 0
Rhizoplane 0.63
Rhizosphere 86.71
Stem 0
Stem Tuber 0
Unclassified 0.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0a205_281178_c1 3300050515 Bacteria 1539
2 Ga0070683_100054625 3300005329 Bacteria 3703
3 Ga0070670_100005852 3300005331 Bacteria 10394
4 Ga0070666_10024095 3300005335 Bacteria 3963
5 Ga0068868_100007608 3300005338 Bacteria 7723
6 Ga0070687_100189532 3300005343 Bacteria 1238
7 Ga0070669_100172569 3300005353 Bacteria 1687
8 Ga0070675_100003883 3300005354 Bacteria 11330
9 Ga0070688_100215767 3300005365 Bacteria 1350
10 Ga0070713_100207435 3300005436 Bacteria 1772
11 Ga0070678_100107942 3300005456 Bacteria 2172
12 Ga0070706_100012348 3300005467 Bacteria 7916
13 Ga0070706_100050346 3300005467 Bacteria 3844
14 Ga0070707_100236833 3300005468 Bacteria 1777
15 Ga0070699_100001098 3300005518 Bacteria 25190
16 Ga0070679_100027070 3300005530 Bacteria 5638
17 Ga0070679_100409379 3300005530 Bacteria 1302
18 Ga0070684_100073046 3300005535 Bacteria 3021
19 Ga0070672_100095537 3300005543 Bacteria 2404
20 Ga0070695_100055438 3300005545 Bacteria 2555
21 Ga0070665_100006721 3300005548 Bacteria 11688
22 Ga0070704_100033290 3300005549 Bacteria 3483
23 Ga0068863_100051288 3300005841 Bacteria 3911
24 Ga0068863_100234449 3300005841 Bacteria 1771
25 Ga0068858_100265954 3300005842 Bacteria 1631
26 Ga0068860_100104029 3300005843 Bacteria 2710
27 Ga0081455_10000403 3300005937 Bacteria 56957
28 Ga0081455_10122506 3300005937 Bacteria 2047
29 Ga0070717_10002347 3300006028 Bacteria 13336
30 Ga0070716_100061961 3300006173 Bacteria 2167
31 Ga0068871_100024360 3300006358 Bacteria 4692
32 Ga0075428_100023033 3300006844 Bacteria 6893
33 Ga0075430_100121656 3300006846 Bacteria 2176
34 Ga0075431_100001770 3300006847 Bacteria 20352
35 Ga0075429_100120837 3300006880 Bacteria 2290
36 Ga0105240_10126024 3300009093 Bacteria 3077
37 Ga0114129_10038358 3300009147 Bacteria 6759
38 Ga0114129_10118822 3300009147 Bacteria 3641
39 Ga0105248_10082369 3300009177 Bacteria 3618
40 Ga0157371_10016229 3300013102 Bacteria 5563
41 Ga0157370_10186986 3300013104 Bacteria 1923
42 Ga0157374_10029647 3300013296 Bacteria 4959
43 Ga0157375_10028764 3300013308 Bacteria 5216
44 Ga0163163_10022259 3300014325 Bacteria 5997
45 Ga0157376_10141182 3300014969 Bacteria 2161
46 Ga0213875_10000899 3300021388 Bacteria 21674
47 Ga0213875_10016180 3300021388 Bacteria 3619
48 Ga0213875_10023667 3300021388 Bacteria 2933
49 Ga0213871_10002018 3300021441 Bacteria 3629
50 Ga0209025_1002466 3300025294 Bacteria 19522
51 Ga0207680_10031361 3300025903 Bacteria 3010
52 Ga0207699_10008038 3300025906 Bacteria 5182
53 Ga0207684_10139583 3300025910 Bacteria 2083
54 Ga0207707_10188905 3300025912 Bacteria 1797
55 Ga0207693_10001743 3300025915 Bacteria 19087
56 Ga0207652_10070833 3300025921 Bacteria 3028
57 Ga0207650_10081512 3300025925 Bacteria 2454
58 Ga0207700_10163741 3300025928 Bacteria 1849
59 Ga0207665_10024654 3300025939 Bacteria 3967
60 Ga0207711_10123862 3300025941 Bacteria 2310
61 Ga0207711_10378513 3300025941 Bacteria 1313
62 Ga0207689_10052295 3300025942 Bacteria 3366
63 Ga0207661_10025697 3300025944 Bacteria 4480
64 Ga0207703_10224907 3300026035 Bacteria 1680
65 Ga0207702_10022535 3300026078 Bacteria 5222
66 Ga0207641_10029008 3300026088 Bacteria 4575
67 Ga0207683_10070884 3300026121 Bacteria 3080
68 Ga0265338_10049943 3300028800 Bacteria 3785
69 Ga0265316_10206534 3300031344 Unclassified 1454
70 Ga0316576_10033817 3300031727 Bacteria 3641
71 Ga0307412_10069597 3300031911 Bacteria 2396
72 Ga0373926_0025152 3300035083 Bacteria 2077
73 Ga0373934_0032807 3300035086 Bacteria 2038
74 Ga0373923_0004280 3300035111 Bacteria 4721
75 Ga0373956_0016150 3300035119 Bacteria 3133
76 Ga0373924_0006030 3300035410 Bacteria 4324
77 Ga0373924_0039607 3300035410 Bacteria 1926
78 Ga0373935_0093915 3300035692 Bacteria 1968
79 Ga0373927_0095987 3300035695 Bacteria 1927
80 Ga0373933_0007412 3300035724 Bacteria 5983
81 Ga0373933_0141552 3300035724 Bacteria 1519
82 Ga0373933_0296844 3300035724 Bacteria 1046
83 Ga0373937_0000617 3300036401 Bacteria 31286
84 Ga0373937_0139953 3300036401 Bacteria 2264
85 Ga0373937_0278833 3300036401 Bacteria 1578
86 Ga0373925_0116008 3300037068 Bacteria 2074
87 Ga0395900_0006655 3300037418 Bacteria 12016
88 Ga0436364_0514631 3300037853 Bacteria 102563
89 Ga0436364_1149765 3300037853 Bacteria 4125
90 Ga0436364_1191392 3300037853 Bacteria 4420
91 Ga0436364_1201433 3300037853 Bacteria 1830
92 Ga0395901_0041376 3300038443 Bacteria 4775
93 Ga0395901_0048257 3300038443 Bacteria 4421
94 Ga0395901_0312630 3300038443 Bacteria 1627
95 Ga0400483_031038 3300039062 Bacteria 6713
96 Ga0400489_01880 3300039093 Bacteria 1780
97 Ga0400489_36591 3300039093 Bacteria 26969
98 Ga0400487_33937 3300039110 Bacteria 2707
99 Ga0436360_0600349 3300039438 Bacteria 5790
100 Ga0436362_1229380 3300039453 Bacteria 2374
101 Ga0451577_0001987 3300042876 Bacteria 25595
102 Ga0451577_0039013 3300042876 Bacteria 4268
103 Ga0451577_0047062 3300042876 Bacteria 3857
104 Ga0453683_0000065 3300044673 Bacteria 166630
105 Ga0453683_0002986 3300044673 Bacteria 12682
106 Ga0453684_0000139 3300044712 Bacteria 320330
107 Ga0453684_0000312 3300044712 Bacteria 206476
108 Ga0453684_0000773 3300044712 Bacteria 110419
109 Ga0453684_0001030 3300044712 Bacteria 89069
110 Ga0453684_0036631 3300044712 Bacteria 6757
111 Ga0453684_0333994 3300044712 Bacteria 1713
112 Ga0453684_0358611 3300044712 Bacteria 1642
113 Ga0453684_0523500 3300044712 Bacteria 1310
114 Ga0451576_0000135 3300045051 Bacteria 186763
115 Ga0451576_0000332 3300045051 Bacteria 114268
116 Ga0451576_0023545 3300045051 Bacteria 6667
117 Ga0451576_0030894 3300045051 Bacteria 5715
118 Ga0495651_0016155 3300046462 Bacteria 5781
119 Ga0495651_0025087 3300046462 Bacteria 4639
120 Ga0495664_0001340 3300046477 Bacteria 12964
121 Ga0495608_0039965 3300046511 Bacteria 3143
122 Ga0495652_0097328 3300046529 Bacteria 2394
123 Ga0495640_0017194 3300046533 Bacteria 5396
124 Ga0495645_0000875 3300046543 Bacteria 20536
125 Ga0495667_0002221 3300046559 Bacteria 13004
126 Ga0495667_0021517 3300046559 Bacteria 4352
127 Ga0495635_0033838 3300046663 Bacteria 3545
128 Ga0495599_0003535 3300046678 Bacteria 9150
129 Ga0495646_0010041 3300046680 Bacteria 6020
130 Ga0495613_0127288 3300046689 Bacteria 1826
131 Ga0495600_0131328 3300046809 Bacteria 1628
132 Ga0495680_0050115 3300047322 Bacteria 3266
133 Ga0495680_0258370 3300047322 Bacteria 1232
134 Ga0495675_0153218 3300047444 Bacteria 1423
135 Ga0495602_0002306 3300048088 Bacteria 19292
136 Ga0495602_0268212 3300048088 Bacteria 1263
137 Ga0496112_0066859 3300048915 Bacteria 3547
138 Ga0496122_0015688 3300048925 Bacteria 7224
139 Ga0501040_0156964 3300049576 Bacteria 1607
140 Ga0501046_0000060 3300049580 Bacteria 125548
141 Ga0501048_0027153 3300049582 Bacteria 4163
142 Ga0501071_0012985 3300049587 Bacteria 5666
143 Ga0501045_0013451 3300049824 Bacteria 5781
144 nmdc:mga0k408_37525_c1 3300050493 Bacteria 2782
145 nmdc:mga06z11_11198_c1 3300050494 Bacteria 3856
146 nmdc:mga05p37_114805_c1 3300050507 Bacteria 3310
147 nmdc:mga09592_114673_c1 3300050508 Bacteria 2313
148 nmdc:mga06r32_224363_c1 3300050510 Bacteria 1867
149 nmdc:mga06r32_3693_c1 3300050510 Bacteria 13674
150 Ga0495601_0002021 3300053077 Bacteria 11386
151 Ga0495601_0127915 3300053077 Bacteria 1653
152 Ga0495619_0013585 3300053085 Bacteria 5131
153 Ga0500583_0002767 3300053092 Bacteria 5355
154 Ga0500641_0009112 3300053096 Bacteria 3560
155 Ga0500641_0024696 3300053096 Bacteria 2319
156 Ga0500658_0066834 3300053134 Bacteria 1509
157 Ga0500636_0001134 3300053177 Bacteria 14278
158 Ga0590075_016260 3300059424 Bacteria 1830
159 nmdc:mga0a205_281178_c1
160 Ga0070683_100054625
161 Ga0070670_100005852
162 Ga0070666_10024095
163 Ga0068868_100007608
164 Ga0070687_100189532
165 Ga0070669_100172569
166 Ga0070675_100003883
167 Ga0070688_100215767
168 Ga0070713_100207435
169 Ga0070678_100107942
170 Ga0070706_100012348
171 Ga0070706_100050346
172 Ga0070707_100236833
173 Ga0070699_100001098
174 Ga0070679_100027070
175 Ga0070679_100409379
176 Ga0070684_100073046
177 Ga0070672_100095537
178 Ga0070695_100055438
179 Ga0070665_100006721
180 Ga0070704_100033290
181 Ga0068863_100051288
182 Ga0068863_100234449
183 Ga0068858_100265954
184 Ga0068860_100104029
185 Ga0081455_10000403
186 Ga0081455_10122506
187 Ga0070717_10002347
188 Ga0070716_100061961
189 Ga0068871_100024360
190 Ga0075428_100023033
191 Ga0075430_100121656
192 Ga0075431_100001770
193 Ga0075429_100120837
194 Ga0105240_10126024
195 Ga0114129_10038358
196 Ga0114129_10118822
197 Ga0105248_10082369
198 Ga0157371_10016229
199 Ga0157370_10186986
200 Ga0157374_10029647
201 Ga0157375_10028764
202 Ga0163163_10022259
203 Ga0157376_10141182
204 Ga0213875_10000899
205 Ga0213875_10016180
206 Ga0213875_10023667
207 Ga0213871_10002018
208 Ga0209025_1002466
209 Ga0207680_10031361
210 Ga0207699_10008038
211 Ga0207684_10139583
212 Ga0207707_10188905
213 Ga0207693_10001743
214 Ga0207652_10070833
215 Ga0207650_10081512
216 Ga0207700_10163741
217 Ga0207665_10024654
218 Ga0207711_10123862
219 Ga0207711_10378513
220 Ga0207689_10052295
221 Ga0207661_10025697
222 Ga0207703_10224907
223 Ga0207702_10022535
224 Ga0207641_10029008
225 Ga0207683_10070884
226 Ga0265338_10049943
227 Ga0265316_10206534
228 Ga0316576_10033817
229 Ga0307412_10069597
230 Ga0373926_0025152
231 Ga0373934_0032807
232 Ga0373923_0004280
233 Ga0373956_0016150
234 Ga0373924_0006030
235 Ga0373924_0039607
236 Ga0373935_0093915
237 Ga0373927_0095987
238 Ga0373933_0007412
239 Ga0373933_0141552
240 Ga0373933_0296844
241 Ga0373937_0000617
242 Ga0373937_0139953
243 Ga0373937_0278833
244 Ga0373925_0116008
245 Ga0395900_0006655
246 Ga0436364_0514631
247 Ga0436364_1149765
248 Ga0436364_1191392
249 Ga0436364_1201433
250 Ga0395901_0041376
251 Ga0395901_0048257
252 Ga0395901_0312630
253 Ga0400483_031038
254 Ga0400489_01880
255 Ga0400489_36591
256 Ga0400487_33937
257 Ga0436360_0600349
258 Ga0436362_1229380
259 Ga0451577_0001987
260 Ga0451577_0039013
261 Ga0451577_0047062
262 Ga0453683_0000065
263 Ga0453683_0002986
264 Ga0453684_0000139
265 Ga0453684_0000312
266 Ga0453684_0000773
267 Ga0453684_0001030
268 Ga0453684_0036631
269 Ga0453684_0333994
270 Ga0453684_0358611
271 Ga0453684_0523500
272 Ga0451576_0000135
273 Ga0451576_0000332
274 Ga0451576_0023545
275 Ga0451576_0030894
276 Ga0495651_0016155
277 Ga0495651_0025087
278 Ga0495664_0001340
279 Ga0495608_0039965
280 Ga0495652_0097328
281 Ga0495640_0017194
282 Ga0495645_0000875
283 Ga0495667_0002221
284 Ga0495667_0021517
285 Ga0495635_0033838
286 Ga0495599_0003535
287 Ga0495646_0010041
288 Ga0495613_0127288
289 Ga0495600_0131328
290 Ga0495680_0050115
291 Ga0495680_0258370
292 Ga0495675_0153218
293 Ga0495602_0002306
294 Ga0495602_0268212
295 Ga0496112_0066859
296 Ga0496122_0015688
297 Ga0501040_0156964
298 Ga0501046_0000060
299 Ga0501048_0027153
300 Ga0501071_0012985
301 Ga0501045_0013451
302 nmdc:mga0k408_37525_c1
303 nmdc:mga06z11_11198_c1
304 nmdc:mga05p37_114805_c1
305 nmdc:mga09592_114673_c1
306 nmdc:mga06r32_224363_c1
307 nmdc:mga06r32_3693_c1
308 Ga0495601_0002021
309 Ga0495601_0127915
310 Ga0495619_0013585
311 Ga0500583_0002767
312 Ga0500641_0009112
313 Ga0500641_0024696
314 Ga0500658_0066834
315 Ga0500636_0001134
316 Ga0590075_016260

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01266

DAO

FAD dependent oxidoreductase

87

449

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dme-assembly1.cif.gz_B crystal structure of conserved exported protein from bordetella pertussis. northeast structural genomics target ber141 0.951 3 370
3dme-assembly1.cif.gz_B crystal structure of conserved exported protein from bordetella pertussis. northeast structural genomics target ber141 0.9434 3 370
4j0e-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p1 space group 0.9009 4 35
4j0f-assembly1.cif.gz_B crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.8937 4 35
4x9n-assembly1.cif.gz_A dithionite reduced l-alpha-glycerophosphate oxidase from mycoplasma pneumoniae with fad bound 0.8896 1 372
ID Description Score Start End Superfamily
af_Q55GI5_4_227_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9621 4 174 3.50.50.60
af_Q5VQP1_29_415_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9472 5 368 3.50.50.60
af_A0A1D8PDW7_22_394_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9435 5 365 3.50.50.60
af_D3ZVS2_51_277_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9351 7 220 3.50.50.60
af_Q9VJ28_45_268_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9329 7 220 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A059LLP2-F1-model_v4 L-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.2) 0.9873 3 168 GO:0047545
AF-A0A2D8QPB0-F1-model_v4 FAD-dependent oxidoreductase 0.9869 7 168 GO:0047545
AF-A0A527IRE9-F1-model_v4 deleted 0.9812 1 185
AF-H0HYS9-F1-model_v4 FAD dependent oxidoreductase domain-containing protein 0.9785 1 185 GO:0047545
AF-A0A496SFX2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.978 3 316 GO:0047545

Map