F228515

General Info

Members Datasets Scaffolds Average Seq Length
157 125 314 374

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2867507094|2867507958
Length 407
Sequence VETAEPDADANVTSSHSNRWSFAGVGRLQGGCRMTRVMTVVGTRPEIIRLSRVIALLDRTVDHSLIHTGQNWDPALSDVFFTELRIRTPDRFLHVDTTSLARVLGGVLLGTEQAIEELRPDALLILGDTNSAIAALMARRMRVPVYHMEAGNRSFDLNVPEETNRRLVDHVADFNLVYSEHARRNLLAEGVHPRRILHTGSPMREVLDHYMDDIKRSTVLDRLGLEPARYFVVSAHREENVDRPERLRALLDCLQAVRDQWRLPLLVSTHPRTRKRLEAVALDDSALDGILFHEPFGFFDYITLQRQARCTLSDSGTVSEEAAILGFPAVTLRDSMERPEALDAGGILMTGLEPAGVVEAVKVVIDQVSTAGVPCPPDYAVADTSRRTVDFILSTVRRHHGWAGIRR

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
19 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
20 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
21 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
23 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
31 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
32 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
33 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
34 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
35 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
36 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
37 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
38 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
39 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
40 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
41 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
42 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
43 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
46 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
47 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
48 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
49 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
50 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
51 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
52 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
53 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
54 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
55 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
56 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
57 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
58 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
59 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
60 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
61 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
62 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
63 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
64 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
67 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
68 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
69 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
80 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
82 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
83 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
84 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
85 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
86 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
87 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
88 2643221572 Leifsonia sp. Root60 Isolate Unclassified
89 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
90 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
91 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
92 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
93 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
94 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
95 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
96 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
97 2855683550 Micromonospora sp. RP3T Isolate Unclassified
98 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
99 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
100 2858868258 Micromonospora sp. MH33 Isolate Unclassified
101 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
102 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
103 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
104 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
105 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
106 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
107 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
108 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
109 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
110 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
111 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
112 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
113 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
114 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
115 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
116 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
117 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
118 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
119 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
120 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
121 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
122 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
123 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
124 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
125 8054704163 Micromonospora trifolii NIE79 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 69.43
Metatranscriptomes 3.18
Isolates 27.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.73
Nodule 0.64
Rhizoplane 7.01
Rhizosphere 67.52
Stem 0
Stem Tuber 0
Unclassified 0.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000214 3300001979 Bacteria 24313
2 Ga0070658_10003697 3300005327 Bacteria 12514
3 Ga0070683_100004292 3300005329 Bacteria 11710
4 Ga0070683_100318280 3300005329 Bacteria 1481
5 Ga0070671_100319805 3300005355 Bacteria 1322
6 Ga0070659_100003754 3300005366 Bacteria 10834
7 Ga0070667_100337076 3300005367 Bacteria 1363
8 Ga0070681_10001068 3300005458 Bacteria 23368
9 Ga0068867_100059518 3300005459 Bacteria 2832
10 Ga0070707_100000251 3300005468 Bacteria 53729
11 Ga0070707_100000436 3300005468 Bacteria 41374
12 Ga0070707_100081966 3300005468 Unclassified 3115
13 Ga0070698_100000053 3300005471 Bacteria 82109
14 Ga0070698_100001181 3300005471 Bacteria 28970
15 Ga0070698_100002057 3300005471 Bacteria 22367
16 Ga0070679_100004974 3300005530 Bacteria 12268
17 Ga0070684_100000604 3300005535 Bacteria 24759
18 Ga0070697_100136877 3300005536 Bacteria 2057
19 Ga0068857_100201381 3300005577 Bacteria 1815
20 Ga0070717_10001019 3300006028 Bacteria 18794
21 Ga0070717_10167757 3300006028 Bacteria 1908
22 Ga0075365_10049942 3300006038 Bacteria 2758
23 Ga0075364_10074548 3300006051 Bacteria 2238
24 Ga0105237_10082659 3300009545 Bacteria 3202
25 Ga0157369_10008236 3300013105 Bacteria 11954
26 Ga0206356_11405725 3300020070 Bacteria 3603
27 Ga0209148_1000890 3300025254 Bacteria 20379
28 Ga0209758_1000292 3300025297 Bacteria 98815
29 Ga0209257_1000285 3300025304 Bacteria 112113
30 Ga0209257_1006339 3300025304 Bacteria 7690
31 Ga0207705_10011805 3300025909 Bacteria 6312
32 Ga0207707_10089765 3300025912 Bacteria 2686
33 Ga0207652_10012944 3300025921 Bacteria 6748
34 Ga0207646_10000127 3300025922 Bacteria 103693
35 Ga0207646_10000200 3300025922 Bacteria 81326
36 Ga0207661_10182216 3300025944 Bacteria 1835
37 Ga0207661_10344552 3300025944 Bacteria 1343
38 Ga0207658_10147493 3300025986 Bacteria 1913
39 Ga0307515_10167709 3300028794 Bacteria 2205
40 Ga0307512_10009398 3300030522 Bacteria 9424
41 Ga0265327_10000023 3300031251 Bacteria 382703
42 Ga0307408_100071173 3300031548 Bacteria 2570
43 Ga0307405_10021764 3300031731 Bacteria 3610
44 Ga0307406_10008197 3300031901 Bacteria 5823
45 Ga0307407_10087601 3300031903 Bacteria 1900
46 Ga0307412_10120028 3300031911 Bacteria 1891
47 Ga0307416_100023270 3300032002 Bacteria 4492
48 Ga0307414_10249731 3300032004 Bacteria 1474
49 Ga0307415_100092242 3300032126 Bacteria 2196
50 Ga0307415_100205303 3300032126 Bacteria 1567
51 Ga0395899_0000090 3300037312 Bacteria 156587
52 Ga0395900_0000017 3300037418 Bacteria 369602
53 Ga0395900_0045323 3300037418 Bacteria 4530
54 Ga0395898_0000030 3300037466 Bacteria 369577
55 Ga0395905_0000081 3300037471 Bacteria 160409
56 Ga0395905_0002152 3300037471 Bacteria 22342
57 Ga0395901_0000015 3300038443 Bacteria 373388
58 Ga0395901_0002297 3300038443 Bacteria 19482
59 Ga0395901_0232748 3300038443 Bacteria 1923
60 Ga0439465_0006197 3300041413 Bacteria 3802
61 Ga0451791_0155951 3300041451 Bacteria 3948
62 Ga0451853_0594499 3300041512 Bacteria 4277
63 Ga0451577_0018938 3300042876 Bacteria 6339
64 Ga0451577_0111856 3300042876 Bacteria 2444
65 Ga0453684_0000013 3300044712 Archaea 1034059
66 Ga0453684_0001476 3300044712 Bacteria 66362
67 Ga0453684_0006791 3300044712 Bacteria 21527
68 Ga0453684_0050576 3300044712 Bacteria 5464
69 Ga0453684_0134681 3300044712 Bacteria 2960
70 Ga0466960_0027549 3300044901 Bacteria 2593
71 Ga0495606_0001742 3300046507 Bacteria 27949
72 Ga0495668_0000213 3300046616 Bacteria 84412
73 Ga0495625_0009829 3300046660 Bacteria 7961
74 Ga0495683_0012700 3300047323 Bacteria 4420
75 Ga0495686_0072487 3300047472 Bacteria 2117
76 Ga0495626_0000601 3300048091 Bacteria 35173
77 Ga0496100_0000957 3300048903 Bacteria 13811
78 Ga0496100_0087723 3300048903 Bacteria 2116
79 Ga0496101_0129640 3300048904 Bacteria 1914
80 Ga0496102_0002158 3300048905 Bacteria 16890
81 Ga0496102_0111279 3300048905 Bacteria 2553
82 Ga0496103_0027045 3300048906 Bacteria 3474
83 Ga0496104_0013333 3300048907 Bacteria 7406
84 Ga0496105_0002642 3300048908 Bacteria 13044
85 Ga0496114_0001380 3300048917 Bacteria 18384
86 Ga0496115_0006303 3300048918 Bacteria 8681
87 Ga0496117_0000651 3300048920 Bacteria 55785
88 Ga0496118_0037760 3300048921 Bacteria 3882
89 Ga0496126_0001361 3300048929 Bacteria 38739
90 Ga0496126_0006640 3300048929 Bacteria 12875
91 Ga0496126_0010240 3300048929 Bacteria 9856
92 Ga0501309_006621 3300049129 Bacteria 1416
93 Ga0501307_004090 3300049162 Bacteria 1470
94 Ga0501320_003050 3300049536 Bacteria 1392
95 Ga0501321_001772 3300049537 Bacteria 1782
96 Ga0501031_0096282 3300049568 Bacteria 1932
97 Ga0501033_0020569 3300049570 Bacteria 4987
98 Ga0501034_0096761 3300049571 Bacteria 2948
99 Ga0501043_0015053 3300049579 Bacteria 6058
100 Ga0501043_0028985 3300049579 Bacteria 4346
101 Ga0501043_0038263 3300049579 Bacteria 3772
102 Ga0501046_0101844 3300049580 Bacteria 2202
103 Ga0501047_0002973 3300049581 Bacteria 16073
104 Ga0501047_0022126 3300049581 Bacteria 6108
105 Ga0501047_0105299 3300049581 Bacteria 2701
106 Ga0501080_0004638 3300049742 Bacteria 12252
107 Ga0501035_0008574 3300049822 Bacteria 9516
108 Ga0501035_0048123 3300049822 Bacteria 3824
109 Ga0501044_0015870 3300049823 Bacteria 8105
110 Ga0501044_0020226 3300049823 Bacteria 7105
111 Ga0501044_0038901 3300049823 Bacteria 4967
112 nmdc:mga0yw44_40897_c1 3300050492 Bacteria 2757
113 Ga0500635_0000027 3300053080 Bacteria 104865
114 Ga0500593_000171 3300053117 Bacteria 26266
115 2867507958 2867507094 Bacteria 6506033
116 2585152751 2582581280 Bacteria 5994497
117 2585196464 2582581293 Bacteria 5907401
118 2643877845 2643221572 Bacteria 3614809
119 2644384900 2643221669 Bacteria 3611286
120 2676473703 2675903058 Bacteria 6822861
121 2676475819 2675903058 Bacteria 6822861
122 2723642915 2721755702 Bacteria 4373124
123 2772644495 2772190715 Bacteria 6959372
124 2827630380 2827628540 Bacteria 6858585
125 2827632415 2827628540 Bacteria 6858585
126 2831940073 2831935698 Bacteria 5963223
127 2832005895 2832004796 Bacteria 6538017
128 2855678335 2855676851 Bacteria 7063653
129 2855683701 2855683550 Bacteria 7134265
130 2857724618 2857723135 Bacteria 4217853
131 2858854997 2858848962 Bacteria 6963058
132 2858875178 2858868258 Bacteria 7683772
133 2858889245 2858888857 Bacteria 7060307
134 2858900453 2858895516 Bacteria 7378898
135 2858906363 2858902515 Bacteria 7086037
136 2866071215 2866065130 Bacteria 6518152
137 2867305238 2867302475 Bacteria 7087181
138 2867317694 2867312974 Bacteria 7058875
139 2867320353 2867319477 Bacteria 7069771
140 2869054883 2869048445 Bacteria 6875584
141 2880492321 2880489317 Bacteria 7096270
142 2880499961 2880495981 Bacteria 7340502
143 2895662714 2895660088 Bacteria 3782833
144 2919443643 2919443155 Bacteria 4072969
145 2919449548 2919446982 Bacteria 3994487
146 2939660636 2939657138 Bacteria 3740283
147 2945921893 2945920336 Bacteria 4501603
148 2945970809 2945968032 Bacteria 4111363
149 2946034798 2946033335 Bacteria 3835514
150 2946037862 2946037020 Bacteria 4900426
151 2946081853 2946080515 Bacteria 4310960
152 2966926225 2966924647 Bacteria 3268643
153 3001890788 3001889506 Bacteria 2975194
154 8003836659 8003830390 Bacteria 6541657
155 8003874371 8003870546 Bacteria 7396674
156 8004183499 8004182704 Bacteria 3391155
157 8054707388 8054704163 Bacteria 7247792
158 JGI24740J21852_10000214
159 Ga0070658_10003697
160 Ga0070683_100004292
161 Ga0070683_100318280
162 Ga0070671_100319805
163 Ga0070659_100003754
164 Ga0070667_100337076
165 Ga0070681_10001068
166 Ga0068867_100059518
167 Ga0070707_100000251
168 Ga0070707_100000436
169 Ga0070707_100081966
170 Ga0070698_100000053
171 Ga0070698_100001181
172 Ga0070698_100002057
173 Ga0070679_100004974
174 Ga0070684_100000604
175 Ga0070697_100136877
176 Ga0068857_100201381
177 Ga0070717_10001019
178 Ga0070717_10167757
179 Ga0075365_10049942
180 Ga0075364_10074548
181 Ga0105237_10082659
182 Ga0157369_10008236
183 Ga0206356_11405725
184 Ga0209148_1000890
185 Ga0209758_1000292
186 Ga0209257_1000285
187 Ga0209257_1006339
188 Ga0207705_10011805
189 Ga0207707_10089765
190 Ga0207652_10012944
191 Ga0207646_10000127
192 Ga0207646_10000200
193 Ga0207661_10182216
194 Ga0207661_10344552
195 Ga0207658_10147493
196 Ga0307515_10167709
197 Ga0307512_10009398
198 Ga0265327_10000023
199 Ga0307408_100071173
200 Ga0307405_10021764
201 Ga0307406_10008197
202 Ga0307407_10087601
203 Ga0307412_10120028
204 Ga0307416_100023270
205 Ga0307414_10249731
206 Ga0307415_100092242
207 Ga0307415_100205303
208 Ga0395899_0000090
209 Ga0395900_0000017
210 Ga0395900_0045323
211 Ga0395898_0000030
212 Ga0395905_0000081
213 Ga0395905_0002152
214 Ga0395901_0000015
215 Ga0395901_0002297
216 Ga0395901_0232748
217 Ga0439465_0006197
218 Ga0451791_0155951
219 Ga0451853_0594499
220 Ga0451577_0018938
221 Ga0451577_0111856
222 Ga0453684_0000013
223 Ga0453684_0001476
224 Ga0453684_0006791
225 Ga0453684_0050576
226 Ga0453684_0134681
227 Ga0466960_0027549
228 Ga0495606_0001742
229 Ga0495668_0000213
230 Ga0495625_0009829
231 Ga0495683_0012700
232 Ga0495686_0072487
233 Ga0495626_0000601
234 Ga0496100_0000957
235 Ga0496100_0087723
236 Ga0496101_0129640
237 Ga0496102_0002158
238 Ga0496102_0111279
239 Ga0496103_0027045
240 Ga0496104_0013333
241 Ga0496105_0002642
242 Ga0496114_0001380
243 Ga0496115_0006303
244 Ga0496117_0000651
245 Ga0496118_0037760
246 Ga0496126_0001361
247 Ga0496126_0006640
248 Ga0496126_0010240
249 Ga0501309_006621
250 Ga0501307_004090
251 Ga0501320_003050
252 Ga0501321_001772
253 Ga0501031_0096282
254 Ga0501033_0020569
255 Ga0501034_0096761
256 Ga0501043_0015053
257 Ga0501043_0028985
258 Ga0501043_0038263
259 Ga0501046_0101844
260 Ga0501047_0002973
261 Ga0501047_0022126
262 Ga0501047_0105299
263 Ga0501080_0004638
264 Ga0501035_0008574
265 Ga0501035_0048123
266 Ga0501044_0015870
267 Ga0501044_0020226
268 Ga0501044_0038901
269 nmdc:mga0yw44_40897_c1
270 Ga0500635_0000027
271 Ga0500593_000171
272 2867507958
273 2585152751
274 2585196464
275 2643877845
276 2644384900
277 2676473703
278 2676475819
279 2723642915
280 2772644495
281 2827630380
282 2827632415
283 2831940073
284 2832005895
285 2855678335
286 2855683701
287 2857724618
288 2858854997
289 2858875178
290 2858889245
291 2858900453
292 2858906363
293 2866071215
294 2867305238
295 2867317694
296 2867320353
297 2869054883
298 2880492321
299 2880499961
300 2895662714
301 2919443643
302 2919449548
303 2939660636
304 2945921893
305 2945970809
306 2946034798
307 2946037862
308 2946081853
309 2966926225
310 3001890788
311 8003836659
312 8003874371
313 8004183499
314 8054707388

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02350

Epimerase_2

UDP-N-acetylglucosamine 2-epimerase

55

393

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ya2-assembly1.cif.gz_A crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.9514 2 372
7ya2-assembly1.cif.gz_E crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.9466 2 372
7ya2-assembly1.cif.gz_A crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.944 2 372
7ya2-assembly1.cif.gz_E crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.9369 2 372
4hwg-assembly1.cif.gz_A structure of udp-n-acetylglucosamine 2-epimerase from rickettsia bellii 0.9292 4 373
ID Description Score Start End Superfamily
af_Q58899_3_336_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9388 8 330 3.40.50.2000
af_Q2G1K2_188_329_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9351 190 329 3.40.50.2000
4hwgA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9329 4 188 3.40.50.2000
af_Q58899_2_184_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9269 7 185 3.40.50.2000
af_Q2G1K2_188_329_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9159 190 329 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A7J5J9M1-F1-model_v4 UDP-N-acetyl glucosamine 2-epimerase 0.9748 2 331 GO:0008761
AF-A0A840W2H9-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing) (EC 5.1.3.14) 0.972 5 375 GO:0008761
AF-A0A519QM94-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing) 0.9705 2 235 GO:0008761
AF-A0A7X6UNQ6-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing) 0.9693 2 93 GO:0008761
AF-A0A4R0GKV4-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing) (EC 5.1.3.14) 0.9691 5 375 GO:0008761

Map