F228378

General Info

Members Datasets Scaffolds Average Seq Length
157 122 314 373

Family's Representative Sequence

Representative Sequence 3300050494|nmdc:mga06z11_17793_c1|nmdc:mga06z11_17793_c1_1510_2763
Length 417
Sequence MSLLVLDAEQIDIVYWGPRRLVPIGVPVPADHSKFVVVGAGLAGAATAWQLATAGHEVTILERGVPADAAGSSHGSARIFRYAYPSEAYTRMVVRAWDLWRELEEVSGTQLITPSGALDFGVLREPARLAGVLDKVGIDHELFDSAAASQRWPQFAFESSVLWHPGAGVIDAESSVATMIGLAVSRGARLLSGWEVSSVEHDGQGYVLHNRAGEGIHAERVVVAAGGWLPSLLGRLGLPADFLAQMPVLQVLQEQAYHFPYRDQATPWPTFIHKNEVLQTYGLPGGRDASYRGQKVAQYCGGRAIPSAEHQGGAIDPANRARVVAHVERYLPGLVPEPYAETTCLFTNTPTEDFVIDRYEGITLVSPCSGHGAKFAPLIGSVAAEAAAASSVEAARSHIPAQFLLPHAPAHHEGGTW

Samples

Sample ID Description Type Environment
1 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
28 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
50 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
51 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
52 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
53 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
54 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
55 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
58 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
59 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
60 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
61 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
62 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
63 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
66 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
67 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
68 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
77 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
78 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
79 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
80 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
81 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
82 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
83 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
84 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
85 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
86 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
87 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
88 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300059507 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 98R_CW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300059623 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 66R_SW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300059642 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 10R_AW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300059648 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 65R_SW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
102 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
103 2643221546 Microbacterium sp. Root53 Isolate Unclassified
104 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
105 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
106 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
107 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
108 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
109 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
110 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
111 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
112 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
113 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
114 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
115 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
116 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
117 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
118 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
119 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
120 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
121 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
122 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.98
Metatranscriptomes 7.64
Isolates 13.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.55
Nodule 0
Rhizoplane 9.55
Rhizosphere 82.17
Stem 0
Stem Tuber 0
Unclassified 9.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06z11_17793_c1 3300050494 Bacteria 3234
2 LJQas_1000256 3300000549 Bacteria 9749
3 Ga0070682_100158771 3300005337 Bacteria 1559
4 Ga0068868_100045885 3300005338 Bacteria 3420
5 Ga0068868_100049014 3300005338 Bacteria 3315
6 Ga0070709_10001969 3300005434 Bacteria 11192
7 Ga0070714_100003860 3300005435 Bacteria 11256
8 Ga0070713_100002899 3300005436 Bacteria 11221
9 Ga0070710_10008173 3300005437 Bacteria 5088
10 Ga0070708_100010107 3300005445 Bacteria 7636
11 Ga0070708_100267550 3300005445 Bacteria 1607
12 Ga0070663_100113898 3300005455 Bacteria 2036
13 Ga0068867_100152914 3300005459 Bacteria 1814
14 Ga0070706_100093938 3300005467 Bacteria 2783
15 Ga0070707_100001980 3300005468 Bacteria 19600
16 Ga0070707_100024328 3300005468 Bacteria 5735
17 Ga0070707_100139577 3300005468 Bacteria 2358
18 Ga0068852_100042814 3300005616 Bacteria 3836
19 Ga0081455_10005561 3300005937 Bacteria 13796
20 Ga0081455_10012077 3300005937 Bacteria 8637
21 Ga0081455_10016480 3300005937 Bacteria 7133
22 Ga0081455_10017305 3300005937 Bacteria 6918
23 Ga0081455_10030938 3300005937 Bacteria 4852
24 Ga0081455_10051044 3300005937 Bacteria 3550
25 Ga0081538_10000745 3300005981 Bacteria 35480
26 Ga0081538_10020970 3300005981 Bacteria 4791
27 Ga0070712_100003012 3300006175 Bacteria 10430
28 Ga0075367_10027919 3300006178 Bacteria 3215
29 Ga0075428_100040452 3300006844 Bacteria 5128
30 Ga0075431_100001868 3300006847 Bacteria 19949
31 Ga0075431_100193481 3300006847 Unclassified 2083
32 Ga0075433_10139233 3300006852 Bacteria 2157
33 Ga0075429_100001261 3300006880 Bacteria 20591
34 Ga0111539_10093032 3300009094 Bacteria 3542
35 Ga0105245_10118504 3300009098 Bacteria 2470
36 Ga0114129_10002849 3300009147 Bacteria 24175
37 Ga0114129_10202442 3300009147 Bacteria 2688
38 Ga0105243_10264654 3300009148 Bacteria 1541
39 Ga0105246_10117275 3300011119 Bacteria 1967
40 Ga0157371_10072199 3300013102 Bacteria 2444
41 Ga0157369_10266847 3300013105 Bacteria 1785
42 Ga0157375_10088533 3300013308 Bacteria 3151
43 Ga0157375_10138245 3300013308 Bacteria 2561
44 Ga0157375_10300906 3300013308 Bacteria 1768
45 Ga0163163_10330283 3300014325 Bacteria 1579
46 Ga0157380_10285713 3300014326 Bacteria 1512
47 Ga0182008_10079702 3300014497 Bacteria 1611
48 Ga0163161_10176234 3300017792 Unclassified 1637
49 Ga0207655_1009326 3300025728 Bacteria 6107
50 Ga0207693_10003849 3300025915 Bacteria 12783
51 Ga0207663_10032726 3300025916 Bacteria 3089
52 Ga0207646_10021208 3300025922 Bacteria 6006
53 Ga0207646_10053703 3300025922 Bacteria 3604
54 Ga0207646_10066249 3300025922 Bacteria 3224
55 Ga0207687_10090550 3300025927 Bacteria 2229
56 Ga0207700_10000670 3300025928 Bacteria 20029
57 Ga0207664_10000190 3300025929 Bacteria 46168
58 Ga0207665_10002336 3300025939 Bacteria 12814
59 Ga0207677_10117042 3300026023 Bacteria 1997
60 Ga0207708_10090483 3300026075 Bacteria 2359
61 Ga0207648_10158990 3300026089 Bacteria 1995
62 Ga0307408_100079268 3300031548 Bacteria 2450
63 Ga0307408_100128130 3300031548 Bacteria 1977
64 Ga0307412_10001250 3300031911 Bacteria 14379
65 Ga0307412_10007094 3300031911 Bacteria 6359
66 Ga0307412_10010638 3300031911 Bacteria 5302
67 Ga0307412_10045640 3300031911 Bacteria 2866
68 Ga0307412_10178115 3300031911 Bacteria 1596
69 Ga0307416_100087690 3300032002 Bacteria 2658
70 Ga0307416_100135872 3300032002 Bacteria 2224
71 Ga0307416_100368553 3300032002 Bacteria 1461
72 Ga0307416_100385068 3300032002 Bacteria 1434
73 Ga0307414_10034560 3300032004 Bacteria 3354
74 Ga0395898_0049448 3300037466 Bacteria 4120
75 Ga0395901_0154591 3300038443 Bacteria 2410
76 Ga0439455_0007354 3300042012 Bacteria 2327
77 Ga0450920_007290 3300042122 Bacteria 2002
78 Ga0439464_0020326 3300042439 Unclassified 1818
79 Ga0439440_0003919 3300042993 Bacteria 2897
80 Ga0466960_0135962 3300044901 Bacteria 1301
81 Ga0495581_0073307 3300047315 Bacteria 1981
82 Ga0496100_0190067 3300048903 Bacteria 1490
83 Ga0496102_0030542 3300048905 Bacteria 4824
84 Ga0496102_0056297 3300048905 Bacteria 3587
85 Ga0496104_0001944 3300048907 Bacteria 17917
86 Ga0496104_0292180 3300048907 Bacteria 1542
87 Ga0496106_0176501 3300048909 Bacteria 1695
88 Ga0496106_0233614 3300048909 Bacteria 1468
89 Ga0496107_0308037 3300048910 Bacteria 1179
90 Ga0496108_0000003 3300048911 Bacteria 595687
91 Ga0496109_0214115 3300048912 Unclassified 1812
92 Ga0496110_0118803 3300048913 Unclassified 2381
93 Ga0496110_0373069 3300048913 Bacteria 1300
94 Ga0496113_0129849 3300048916 Bacteria 1976
95 Ga0496113_0226104 3300048916 Bacteria 1492
96 Ga0496115_0106954 3300048918 Bacteria 2297
97 Ga0501033_0037837 3300049570 Bacteria 3610
98 Ga0501034_0000492 3300049571 Bacteria 64181
99 Ga0501038_0051411 3300049574 Bacteria 3556
100 Ga0501038_0098240 3300049574 Bacteria 2441
101 Ga0501038_0194030 3300049574 Bacteria 1633
102 Ga0501039_0119592 3300049575 Unclassified 2064
103 Ga0501042_0062290 3300049578 Unclassified 2665
104 Ga0501043_0004457 3300049579 Bacteria 11377
105 Ga0501043_0159379 3300049579 Unclassified 1764
106 Ga0501048_0047457 3300049582 Bacteria 3065
107 Ga0501072_0124015 3300049588 Unclassified 2058
108 Ga0501074_0099881 3300049590 Unclassified 2077
109 Ga0501075_0056377 3300049591 Bacteria 2958
110 Ga0501077_0089186 3300049593 Unclassified 1954
111 Ga0501079_0138238 3300049741 Unclassified 1897
112 Ga0501045_0008805 3300049824 Bacteria 7046
113 nmdc:mga00v17_83488_c1 3300050491 Bacteria 1998
114 nmdc:mga05p37_315552_c1 3300050507 Bacteria 1852
115 nmdc:mga05p37_38309_c1 3300050507 Bacteria 5881
116 nmdc:mga09592_33874_c1 3300050508 Bacteria 4268
117 nmdc:mga0qj67_33150_c1 3300050509 Bacteria 4030
118 nmdc:mga08y16_78105_c1 3300050511 Bacteria 3451
119 Ga0500616_0005439 3300053153 Bacteria 8643
120 Ga0501084_0040586 3300054114 Bacteria 3894
121 Ga0501084_0141569 3300054114 Bacteria 2025
122 Ga0587084_000001 3300059477 Bacteria 25091
123 Ga0587070_000438 3300059491 Bacteria 3423
124 Ga0587077_000092 3300059493 Bacteria 4979
125 Ga0587085_009034 3300059506 Bacteria 1288
126 Ga0587086_000120 3300059507 Bacteria 4086
127 Ga0587088_011872 3300059508 Bacteria 1307
128 Ga0587091_000066 3300059511 Bacteria 5526
129 Ga0587092_000100 3300059512 Bacteria 4986
130 Ga0587101_000020 3300059623 Bacteria 7554
131 Ga0587069_000130 3300059642 Bacteria 4354
132 Ga0587100_000022 3300059648 Bacteria 4978
133 Ga0587111_0000196 3300060346 Bacteria 4757
134 Ga0501082_0135428 3300060353 Unclassified 2137
135 Ga0530510_0084749 3300061734 Unclassified 2308
136 Ga0530510_0118236 3300061734 Unclassified 1944
137 2555230098 2554235227 Bacteria 3637389
138 2643753213 2643221546 Bacteria 2910897
139 2643852674 2643221567 Bacteria 4163945
140 2644135182 2643221624 Bacteria 4384879
141 2655031044 2654587600 Bacteria 3911798
142 2775657463 2775506735 Bacteria 4556596
143 2812319497 2811994871 Bacteria 4497550
144 2852680744 2852677369 Bacteria 3768884
145 2857730762 2857729791 Bacteria 4040535
146 2870803196 2870801768 Bacteria 2710986
147 2904501277 2904497146 Bacteria 4731781
148 2905929913 2905926851 Bacteria 4423176
149 2910814280 2910809715 Bacteria 4982797
150 2919035276 2919034639 Bacteria 4763403
151 2928123142 2928121344 Bacteria 3972376
152 2939602277 2939598168 Bacteria 4687164
153 2945958982 2945956166 Bacteria 5110334
154 2946005959 2946003308 Bacteria 3857229
155 2946041234 2946037020 Bacteria 4900426
156 2946042206 2946041624 Bacteria 4191385
157 2954706777 2954701450 Bacteria 10834262
158 nmdc:mga06z11_17793_c1
159 LJQas_1000256
160 Ga0070682_100158771
161 Ga0068868_100045885
162 Ga0068868_100049014
163 Ga0070709_10001969
164 Ga0070714_100003860
165 Ga0070713_100002899
166 Ga0070710_10008173
167 Ga0070708_100010107
168 Ga0070708_100267550
169 Ga0070663_100113898
170 Ga0068867_100152914
171 Ga0070706_100093938
172 Ga0070707_100001980
173 Ga0070707_100024328
174 Ga0070707_100139577
175 Ga0068852_100042814
176 Ga0081455_10005561
177 Ga0081455_10012077
178 Ga0081455_10016480
179 Ga0081455_10017305
180 Ga0081455_10030938
181 Ga0081455_10051044
182 Ga0081538_10000745
183 Ga0081538_10020970
184 Ga0070712_100003012
185 Ga0075367_10027919
186 Ga0075428_100040452
187 Ga0075431_100001868
188 Ga0075431_100193481
189 Ga0075433_10139233
190 Ga0075429_100001261
191 Ga0111539_10093032
192 Ga0105245_10118504
193 Ga0114129_10002849
194 Ga0114129_10202442
195 Ga0105243_10264654
196 Ga0105246_10117275
197 Ga0157371_10072199
198 Ga0157369_10266847
199 Ga0157375_10088533
200 Ga0157375_10138245
201 Ga0157375_10300906
202 Ga0163163_10330283
203 Ga0157380_10285713
204 Ga0182008_10079702
205 Ga0163161_10176234
206 Ga0207655_1009326
207 Ga0207693_10003849
208 Ga0207663_10032726
209 Ga0207646_10021208
210 Ga0207646_10053703
211 Ga0207646_10066249
212 Ga0207687_10090550
213 Ga0207700_10000670
214 Ga0207664_10000190
215 Ga0207665_10002336
216 Ga0207677_10117042
217 Ga0207708_10090483
218 Ga0207648_10158990
219 Ga0307408_100079268
220 Ga0307408_100128130
221 Ga0307412_10001250
222 Ga0307412_10007094
223 Ga0307412_10010638
224 Ga0307412_10045640
225 Ga0307412_10178115
226 Ga0307416_100087690
227 Ga0307416_100135872
228 Ga0307416_100368553
229 Ga0307416_100385068
230 Ga0307414_10034560
231 Ga0395898_0049448
232 Ga0395901_0154591
233 Ga0439455_0007354
234 Ga0450920_007290
235 Ga0439464_0020326
236 Ga0439440_0003919
237 Ga0466960_0135962
238 Ga0495581_0073307
239 Ga0496100_0190067
240 Ga0496102_0030542
241 Ga0496102_0056297
242 Ga0496104_0001944
243 Ga0496104_0292180
244 Ga0496106_0176501
245 Ga0496106_0233614
246 Ga0496107_0308037
247 Ga0496108_0000003
248 Ga0496109_0214115
249 Ga0496110_0118803
250 Ga0496110_0373069
251 Ga0496113_0129849
252 Ga0496113_0226104
253 Ga0496115_0106954
254 Ga0501033_0037837
255 Ga0501034_0000492
256 Ga0501038_0051411
257 Ga0501038_0098240
258 Ga0501038_0194030
259 Ga0501039_0119592
260 Ga0501042_0062290
261 Ga0501043_0004457
262 Ga0501043_0159379
263 Ga0501048_0047457
264 Ga0501072_0124015
265 Ga0501074_0099881
266 Ga0501075_0056377
267 Ga0501077_0089186
268 Ga0501079_0138238
269 Ga0501045_0008805
270 nmdc:mga00v17_83488_c1
271 nmdc:mga05p37_315552_c1
272 nmdc:mga05p37_38309_c1
273 nmdc:mga09592_33874_c1
274 nmdc:mga0qj67_33150_c1
275 nmdc:mga08y16_78105_c1
276 Ga0500616_0005439
277 Ga0501084_0040586
278 Ga0501084_0141569
279 Ga0587084_000001
280 Ga0587070_000438
281 Ga0587077_000092
282 Ga0587085_009034
283 Ga0587086_000120
284 Ga0587088_011872
285 Ga0587091_000066
286 Ga0587092_000100
287 Ga0587101_000020
288 Ga0587069_000130
289 Ga0587100_000022
290 Ga0587111_0000196
291 Ga0501082_0135428
292 Ga0530510_0084749
293 Ga0530510_0118236
294 2555230098
295 2643753213
296 2643852674
297 2644135182
298 2655031044
299 2775657463
300 2812319497
301 2852680744
302 2857730762
303 2870803196
304 2904501277
305 2905929913
306 2910814280
307 2919035276
308 2928123142
309 2939602277
310 2945958982
311 2946005959
312 2946041234
313 2946042206
314 2954706777

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01266

DAO

FAD dependent oxidoreductase

34

386

0.82

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

37

103

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a3x-assembly1.cif.gz_B imine reductase from ensifer adhaerens in complex with nadp+ 0.9784 6 35
5a9s-assembly1.cif.gz_B nadph complex of imine reductase from amycolatopsis orientalis 0.971 6 36
5a9r-assembly1.cif.gz_A apo form of imine reductase from amycolatopsis orientalis 0.96 6 37
8a5z-assembly1.cif.gz_A imine reductase from ensifer adhaerens a208n mutant in complex with nadp+ 0.9441 5 36
6toe-assembly2.cif.gz_F imine reductase from myxococcus stipitatus v8 variant in complex with nad+ 0.9427 5 34
ID Description Score Start End Superfamily
af_I6XF25_1_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.004 6 35 3.40.50.720
1mfzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9875 6 36 3.40.50.720
af_Q58454_1_196_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9875 6 35 3.40.50.720
3gg2D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9803 6 35 3.40.50.720
3k30B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9786 5 36 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A399N0Z3-F1-model_v4 deleted 0.9681 4 283
AF-A0A2V1HRS0-F1-model_v4 Sarcosine oxidase 0.9676 4 372 GO:0008115
GO:0050660
AF-A0A2V1HRS0-F1-model_v4 Sarcosine oxidase 0.9548 4 372 GO:0008115
GO:0050660
AF-A0A2S9DHY6-F1-model_v4 Sarcosine oxidase 0.9537 1 372 GO:0008115
GO:0050660
AF-A0A318RYM2-F1-model_v4 Monomeric sarcosine oxidase 0.9495 1 370 GO:0008115
GO:0050660

Map