F227680

General Info

Members Datasets Scaffolds Average Seq Length
157 95 314 298

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100099982|Ga0307416_1000999824
Length 309
Sequence MVAGLRIAVTGGTGFVGSRLLSALKEGEHQVRALTRRPQSNEGGIAWIAGSLEDSGSLARLAEGADALIHVAGIINADAAGFEAGNVAGTAAMLDAAKAQRVTRFIHVSSLAAREPQLSRYGASKARSEDLVRASGLDFSIVRPPAVFGPGDRETLDLFRMARRGLVLLPPRGRLSLLHADDLAALLIALASAKDAPELIEPDDGKPGGWTHREFAAALGEAVGRRGVALSMPGAALRIGAMLDGLVRRGRAKLTPDRAAYFCHPDWVANPSLAPPAELWRPAIDTRDGLRATAEWYSEHRLLRAPGRS

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
58 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
62 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
66 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
67 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
74 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
77 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
81 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
82 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
83 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
84 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
95 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.46
Rhizosphere 94.27
Stem 0
Stem Tuber 0
Unclassified 4.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100099982 3300032002 Bacteria 2521
2 Ga0065712_10080408 3300005290 Bacteria 3108
3 Ga0070658_10002974 3300005327 Bacteria 14038
4 Ga0070658_10017970 3300005327 Bacteria 5656
5 Ga0070658_10355965 3300005327 Bacteria 1253
6 Ga0070683_100014032 3300005329 Bacteria 6997
7 Ga0070670_100081577 3300005331 Bacteria 2779
8 Ga0070670_100235616 3300005331 Bacteria 1593
9 Ga0070666_10264941 3300005335 Bacteria 1219
10 Ga0070680_100342987 3300005336 Unclassified 1269
11 Ga0070660_100010009 3300005339 Bacteria 6686
12 Ga0070660_100075680 3300005339 Bacteria 2636
13 Ga0070660_100485911 3300005339 Bacteria 1026
14 Ga0070668_100162431 3300005347 Bacteria 1813
15 Ga0070669_100137133 3300005353 Bacteria 1883
16 Ga0070671_100018427 3300005355 Bacteria 5670
17 Ga0070671_100420814 3300005355 Bacteria 1144
18 Ga0070659_100056676 3300005366 Bacteria 3090
19 Ga0070667_100267400 3300005367 Bacteria 1532
20 Ga0070681_10245001 3300005458 Bacteria 1705
21 Ga0070679_100540919 3300005530 Unclassified 1108
22 Ga0068853_100009085 3300005539 Bacteria 8003
23 Ga0070672_100066665 3300005543 Bacteria 2851
24 Ga0068855_100000962 3300005563 Bacteria 35800
25 Ga0070664_100044660 3300005564 Bacteria 3741
26 Ga0070664_100358219 3300005564 Bacteria 1328
27 Ga0068852_100316228 3300005616 Bacteria 1515
28 Ga0068859_100149354 3300005617 Bacteria 2413
29 Ga0068864_100468681 3300005618 Bacteria 1207
30 Ga0068858_100019265 3300005842 Bacteria 6381
31 Ga0068858_100094974 3300005842 Bacteria 2778
32 Ga0081539_10048860 3300005985 Bacteria 2404
33 Ga0097621_100055908 3300006237 Bacteria 3223
34 Ga0068871_100025989 3300006358 Bacteria 4563
35 Ga0097620_100149355 3300006931 Bacteria 2413
36 Ga0105240_10078303 3300009093 Bacteria 4071
37 Ga0105248_10100079 3300009177 Bacteria 3266
38 Ga0163162_10029418 3300013306 Bacteria 5437
39 Ga0157375_10023647 3300013308 Bacteria 5673
40 Ga0163161_10010545 3300017792 Bacteria 6400
41 Ga0207705_10002565 3300025909 Bacteria 13966
42 Ga0207705_10009845 3300025909 Bacteria 6957
43 Ga0207705_10085193 3300025909 Bacteria 2308
44 Ga0207707_10139334 3300025912 Bacteria 2121
45 Ga0207660_10238371 3300025917 Bacteria 1432
46 Ga0207657_10002036 3300025919 Bacteria 21865
47 Ga0207657_10085021 3300025919 Bacteria 2651
48 Ga0207681_10032228 3300025923 Bacteria 3430
49 Ga0207694_10061619 3300025924 Bacteria 2920
50 Ga0207650_10191150 3300025925 Bacteria 1636
51 Ga0207690_10066976 3300025932 Bacteria 2462
52 Ga0207706_10270579 3300025933 Bacteria 1483
53 Ga0207691_10082740 3300025940 Bacteria 2882
54 Ga0207667_10004952 3300025949 Bacteria 16269
55 Ga0207668_10144416 3300025972 Bacteria 1834
56 Ga0207658_10240514 3300025986 Bacteria 1533
57 Ga0207703_10067042 3300026035 Bacteria 2953
58 Ga0207639_10018070 3300026041 Bacteria 5005
59 Ga0207678_10005871 3300026067 Bacteria 10947
60 Ga0207641_10014799 3300026088 Bacteria 6396
61 Ga0207676_10185833 3300026095 Bacteria 1824
62 Ga0207683_10436569 3300026121 Bacteria 1207
63 Ga0207698_10112804 3300026142 Bacteria 2283
64 Ga0209983_1007080 3300027665 Bacteria 2303
65 Ga0209974_10000346 3300027876 Bacteria 15170
66 Ga0268265_10004697 3300028380 Bacteria 9430
67 Ga0307408_100110879 3300031548 Bacteria 2107
68 Ga0307408_100111348 3300031548 Bacteria 2103
69 Ga0307408_100263892 3300031548 Bacteria 1427
70 Ga0307405_10034658 3300031731 Bacteria 3006
71 Ga0307405_10121827 3300031731 Bacteria 1786
72 Ga0307405_10363199 3300031731 Unclassified 1121
73 Ga0307405_10436297 3300031731 Bacteria 1035
74 Ga0307405_10511678 3300031731 Bacteria 964
75 Ga0307413_10012248 3300031824 Bacteria 4260
76 Ga0307413_10033252 3300031824 Bacteria 2933
77 Ga0307413_10117695 3300031824 Bacteria 1792
78 Ga0307413_10293284 3300031824 Bacteria 1230
79 Ga0307410_10010193 3300031852 Bacteria 5312
80 Ga0307410_10014627 3300031852 Bacteria 4624
81 Ga0307410_10039874 3300031852 Bacteria 3086
82 Ga0307410_10154259 3300031852 Unclassified 1713
83 Ga0307410_10193830 3300031852 Bacteria 1547
84 Ga0307410_10364299 3300031852 Bacteria 1158
85 Ga0307406_10003485 3300031901 Bacteria 8559
86 Ga0307406_10016784 3300031901 Bacteria 4260
87 Ga0307406_10125050 3300031901 Unclassified 1795
88 Ga0307406_10133290 3300031901 Bacteria 1747
89 Ga0307407_10027609 3300031903 Bacteria 3023
90 Ga0307407_10061673 3300031903 Bacteria 2193
91 Ga0307407_10084843 3300031903 Bacteria 1925
92 Ga0307407_10279678 3300031903 Bacteria 1155
93 Ga0307412_10014532 3300031911 Bacteria 4645
94 Ga0307412_10304960 3300031911 Bacteria 1260
95 Ga0307409_100225548 3300031995 Bacteria 1694
96 Ga0307416_100014587 3300032002 Bacteria 5393
97 Ga0307416_100023864 3300032002 Bacteria 4449
98 Ga0307416_100078638 3300032002 Bacteria 2776
99 Ga0307416_100479404 3300032002 Bacteria 1304
100 Ga0307414_10004220 3300032004 Bacteria 7784
101 Ga0307414_10016557 3300032004 Bacteria 4485
102 Ga0307414_10067827 3300032004 Bacteria 2557
103 Ga0307414_10068553 3300032004 Bacteria 2546
104 Ga0307414_10220262 3300032004 Bacteria 1557
105 Ga0307414_10452450 3300032004 Bacteria 1126
106 Ga0307414_10595488 3300032004 Bacteria 991
107 Ga0307411_10023389 3300032005 Bacteria 3659
108 Ga0307411_10072807 3300032005 Bacteria 2334
109 Ga0307411_10158717 3300032005 Bacteria 1690
110 Ga0307415_100002314 3300032126 Bacteria 9457
111 Ga0307415_100003990 3300032126 Bacteria 7600
112 Ga0307415_100018137 3300032126 Bacteria 4241
113 Ga0307415_100425137 3300032126 Bacteria 1141
114 Ga0307415_100459987 3300032126 Bacteria 1102
115 Ga0373943_0049437 3300035170 Bacteria 2064
116 Ga0395899_0042819 3300037312 Bacteria 3378
117 Ga0395899_0265710 3300037312 Bacteria 1172
118 Ga0395900_0065971 3300037418 Bacteria 3719
119 Ga0395900_0144636 3300037418 Bacteria 2432
120 Ga0395900_0150807 3300037418 Bacteria 2375
121 Ga0395900_0169004 3300037418 Bacteria 2227
122 Ga0395900_0180350 3300037418 Bacteria 2146
123 Ga0395900_0209896 3300037418 Bacteria 1966
124 Ga0395900_0316064 3300037418 Bacteria 1543
125 Ga0395898_0338595 3300037466 Bacteria 1435
126 Ga0395905_0073520 3300037471 Bacteria 3204
127 Ga0395905_0117705 3300037471 Bacteria 2497
128 Ga0395905_0177023 3300037471 Bacteria 2002
129 Ga0395905_0286572 3300037471 Bacteria 1534
130 Ga0395901_0320069 3300038443 Bacteria 1605
131 Ga0395901_0511978 3300038443 Bacteria 1220
132 Ga0439432_006268 3300042006 Bacteria 4254
133 Ga0466972_0065611 3300044658 Bacteria 1736
134 Ga0466963_0216571 3300044694 Bacteria 1341
135 Ga0466971_0025879 3300044719 Bacteria 2621
136 Ga0466970_0064888 3300044765 Bacteria 1959
137 Ga0466957_0175540 3300044842 Bacteria 1397
138 Ga0466967_0149345 3300045976 Bacteria 2183
139 Ga0466967_0184623 3300045976 Unclassified 1969
140 Ga0466967_0187133 3300045976 Bacteria 1955
141 Ga0495663_0041841 3300046525 Bacteria 1395
142 Ga0495633_0007098 3300046558 Bacteria 6510
143 Ga0495669_0024841 3300046684 Bacteria 2610
144 Ga0495636_0081410 3300047318 Unclassified 1395
145 Ga0495677_0102531 3300047445 Bacteria 1084
146 Ga0496108_0057166 3300048911 Bacteria 3278
147 Ga0496111_0030534 3300048914 Bacteria 3833
148 Ga0496112_0004870 3300048915 Bacteria 11477
149 Ga0496113_0301446 3300048916 Bacteria 1283
150 Ga0496114_0010393 3300048917 Bacteria 7406
151 Ga0496114_0145508 3300048917 Bacteria 2054
152 Ga0496115_0002676 3300048918 Bacteria 12779
153 Ga0496122_0000176 3300048925 Bacteria 152190
154 Ga0496123_0000291 3300048926 Bacteria 97989
155 Ga0501067_0130088 3300049583 Bacteria 1401
156 Ga0501247_001729 3300049677 Bacteria 2173
157 Ga0501249_002699 3300049679 Bacteria 3576
158 Ga0307416_100099982
159 Ga0065712_10080408
160 Ga0070658_10002974
161 Ga0070658_10017970
162 Ga0070658_10355965
163 Ga0070683_100014032
164 Ga0070670_100081577
165 Ga0070670_100235616
166 Ga0070666_10264941
167 Ga0070680_100342987
168 Ga0070660_100010009
169 Ga0070660_100075680
170 Ga0070660_100485911
171 Ga0070668_100162431
172 Ga0070669_100137133
173 Ga0070671_100018427
174 Ga0070671_100420814
175 Ga0070659_100056676
176 Ga0070667_100267400
177 Ga0070681_10245001
178 Ga0070679_100540919
179 Ga0068853_100009085
180 Ga0070672_100066665
181 Ga0068855_100000962
182 Ga0070664_100044660
183 Ga0070664_100358219
184 Ga0068852_100316228
185 Ga0068859_100149354
186 Ga0068864_100468681
187 Ga0068858_100019265
188 Ga0068858_100094974
189 Ga0081539_10048860
190 Ga0097621_100055908
191 Ga0068871_100025989
192 Ga0097620_100149355
193 Ga0105240_10078303
194 Ga0105248_10100079
195 Ga0163162_10029418
196 Ga0157375_10023647
197 Ga0163161_10010545
198 Ga0207705_10002565
199 Ga0207705_10009845
200 Ga0207705_10085193
201 Ga0207707_10139334
202 Ga0207660_10238371
203 Ga0207657_10002036
204 Ga0207657_10085021
205 Ga0207681_10032228
206 Ga0207694_10061619
207 Ga0207650_10191150
208 Ga0207690_10066976
209 Ga0207706_10270579
210 Ga0207691_10082740
211 Ga0207667_10004952
212 Ga0207668_10144416
213 Ga0207658_10240514
214 Ga0207703_10067042
215 Ga0207639_10018070
216 Ga0207678_10005871
217 Ga0207641_10014799
218 Ga0207676_10185833
219 Ga0207683_10436569
220 Ga0207698_10112804
221 Ga0209983_1007080
222 Ga0209974_10000346
223 Ga0268265_10004697
224 Ga0307408_100110879
225 Ga0307408_100111348
226 Ga0307408_100263892
227 Ga0307405_10034658
228 Ga0307405_10121827
229 Ga0307405_10363199
230 Ga0307405_10436297
231 Ga0307405_10511678
232 Ga0307413_10012248
233 Ga0307413_10033252
234 Ga0307413_10117695
235 Ga0307413_10293284
236 Ga0307410_10010193
237 Ga0307410_10014627
238 Ga0307410_10039874
239 Ga0307410_10154259
240 Ga0307410_10193830
241 Ga0307410_10364299
242 Ga0307406_10003485
243 Ga0307406_10016784
244 Ga0307406_10125050
245 Ga0307406_10133290
246 Ga0307407_10027609
247 Ga0307407_10061673
248 Ga0307407_10084843
249 Ga0307407_10279678
250 Ga0307412_10014532
251 Ga0307412_10304960
252 Ga0307409_100225548
253 Ga0307416_100014587
254 Ga0307416_100023864
255 Ga0307416_100078638
256 Ga0307416_100479404
257 Ga0307414_10004220
258 Ga0307414_10016557
259 Ga0307414_10067827
260 Ga0307414_10068553
261 Ga0307414_10220262
262 Ga0307414_10452450
263 Ga0307414_10595488
264 Ga0307411_10023389
265 Ga0307411_10072807
266 Ga0307411_10158717
267 Ga0307415_100002314
268 Ga0307415_100003990
269 Ga0307415_100018137
270 Ga0307415_100425137
271 Ga0307415_100459987
272 Ga0373943_0049437
273 Ga0395899_0042819
274 Ga0395899_0265710
275 Ga0395900_0065971
276 Ga0395900_0144636
277 Ga0395900_0150807
278 Ga0395900_0169004
279 Ga0395900_0180350
280 Ga0395900_0209896
281 Ga0395900_0316064
282 Ga0395898_0338595
283 Ga0395905_0073520
284 Ga0395905_0117705
285 Ga0395905_0177023
286 Ga0395905_0286572
287 Ga0395901_0320069
288 Ga0395901_0511978
289 Ga0439432_006268
290 Ga0466972_0065611
291 Ga0466963_0216571
292 Ga0466971_0025879
293 Ga0466970_0064888
294 Ga0466957_0175540
295 Ga0466967_0149345
296 Ga0466967_0184623
297 Ga0466967_0187133
298 Ga0495663_0041841
299 Ga0495633_0007098
300 Ga0495669_0024841
301 Ga0495636_0081410
302 Ga0495677_0102531
303 Ga0496108_0057166
304 Ga0496111_0030534
305 Ga0496112_0004870
306 Ga0496113_0301446
307 Ga0496114_0010393
308 Ga0496114_0145508
309 Ga0496115_0002676
310 Ga0496122_0000176
311 Ga0496123_0000291
312 Ga0501067_0130088
313 Ga0501247_001729
314 Ga0501249_002699

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05368

NmrA

NmrA-like family

7

156

0.91

PF13460

NAD_binding_10

NAD(P)H-binding

11

166

0.88

PF07993

NAD_binding_4

Male sterility protein

51

120

0.86

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

8

120

0.85

PF04321

RmlD_sub_bind

RmlD substrate binding domain

5

168

0.84

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

7

201

0.83

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

7

143

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jkg-assembly1.cif.gz_A the nad+-free form of human nsdhl 0.9024 2 141
6jkh-assembly1.cif.gz_B the nad+-bound form of human nsdhl 0.9012 2 141
6jkh-assembly1.cif.gz_A the nad+-bound form of human nsdhl 0.896 2 141
6jkg-assembly1.cif.gz_B the nad+-free form of human nsdhl 0.8852 2 141
6y79-assembly1.cif.gz_E cryo-em structure of a respiratory complex i f89a mutant 0.8632 2 281
ID Description Score Start End Superfamily
6bwcE01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8947 2 140 3.40.50.720
af_I1KG15_128_276_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.885 2 96 3.40.50.720
af_I1KVW6_141_273_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8848 2 96 3.40.50.20
af_A0A1D6MTK5_41_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8829 2 107 3.40.50.720
af_A0A1D6GVM8_196_300_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8822 2 96 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A4Q2YSM3-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9915 2 120 GO:0004029
GO:0005737
AF-A0A2D8MB06-F1-model_v4 Epimerase 0.9902 1 101 GO:0044877
GO:1901006
AF-A0A7H0G4N8-F1-model_v4 deleted 0.9882 2 301
AF-A0A853FL01-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9876 2 301 GO:0004029
GO:0005737
AF-A0A3D2E7V2-F1-model_v4 deleted 0.9868 1 301

Map