F227412
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 157 | 91 | 314 | 208 |
Family's Representative Sequence
| Representative Sequence | 3300025912|Ga0207707_10304894|Ga0207707_103048941 |
| Length | 199 |
| Sequence | MEIVIYILLGLTSVVGLAFIIERAIALQWRKVVPAEIETAVQSCRMREDVAMLRRVCEQKPSPLGRLLIQSSDHLDWPKAENEAALETKARHEVVNLERGLVVLEIIVGIAPLLGLVGTIAGMMTLFREIGPNGPEAGKLASGIALILRATLWGLLIAIPSLITWSYFSKKIEILTVEMETLCDQFLRRQYREEKESVK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 3 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 4 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 17 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 18 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 19 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 22 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 44 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 45 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 46 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 47 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 48 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 49 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 50 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 51 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 52 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 53 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 54 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 55 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 56 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 57 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 58 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 59 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 60 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 61 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 62 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 63 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 64 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 65 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 66 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 67 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 68 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 69 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 70 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 71 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 72 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 73 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 88 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 89 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 90 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300053098 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.64 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 98.09 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 26.75 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207707_10304894 | 3300025912 | Unclassified | 1377 |
| 2 | rootH2_10000391 | 3300003320 | Bacteria | 4312 |
| 3 | rootH1_10183528 | 3300003323 | Bacteria | 8415 |
| 4 | Ga0065707_10170800 | 3300005295 | Bacteria | 1486 |
| 5 | Ga0070683_100217147 | 3300005329 | Unclassified | 1817 |
| 6 | Ga0070690_100000407 | 3300005330 | Bacteria | 21783 |
| 7 | Ga0070660_100049061 | 3300005339 | Unclassified | 3244 |
| 8 | Ga0070689_100013039 | 3300005340 | Bacteria | 6005 |
| 9 | Ga0070689_100179275 | 3300005340 | Bacteria | 1720 |
| 10 | Ga0070687_100583927 | 3300005343 | Bacteria | 765 |
| 11 | Ga0070669_100368602 | 3300005353 | Bacteria | 1169 |
| 12 | Ga0070714_100001234 | 3300005435 | Bacteria | 18443 |
| 13 | Ga0070701_10222175 | 3300005438 | Bacteria | 1127 |
| 14 | Ga0070711_100016416 | 3300005439 | Bacteria | 4703 |
| 15 | Ga0070681_10368504 | 3300005458 | Bacteria | 1347 |
| 16 | Ga0070679_100188228 | 3300005530 | Bacteria | 2033 |
| 17 | Ga0068855_100031095 | 3300005563 | Bacteria | 6378 |
| 18 | Ga0068855_100195032 | 3300005563 | Bacteria | 2282 |
| 19 | Ga0068856_100070238 | 3300005614 | Bacteria | 3464 |
| 20 | Ga0068856_100311597 | 3300005614 | Unclassified | 1591 |
| 21 | Ga0068859_100122883 | 3300005617 | Bacteria | 2663 |
| 22 | Ga0068864_100542423 | 3300005618 | Bacteria | 1123 |
| 23 | Ga0068863_100286805 | 3300005841 | Unclassified | 1595 |
| 24 | Ga0075433_10356588 | 3300006852 | Bacteria | 1292 |
| 25 | Ga0097620_100001997 | 3300006931 | Bacteria | 20834 |
| 26 | Ga0097620_100122880 | 3300006931 | Bacteria | 2663 |
| 27 | Ga0097620_100573125 | 3300006931 | Bacteria | 1222 |
| 28 | Ga0105240_10123199 | 3300009093 | Bacteria | 3119 |
| 29 | Ga0105240_10134916 | 3300009093 | Unclassified | 2957 |
| 30 | Ga0105248_10354864 | 3300009177 | Unclassified | 1651 |
| 31 | Ga0105238_10076002 | 3300009551 | Unclassified | 3350 |
| 32 | Ga0105238_10418799 | 3300009551 | Unclassified | 1334 |
| 33 | Ga0105238_10610166 | 3300009551 | Unclassified | 1099 |
| 34 | Ga0157378_10113570 | 3300013297 | Bacteria | 2487 |
| 35 | Ga0157372_10170649 | 3300013307 | Unclassified | 2517 |
| 36 | Ga0163163_10140134 | 3300014325 | Bacteria | 2460 |
| 37 | Ga0157380_10519994 | 3300014326 | Bacteria | 1160 |
| 38 | Ga0207695_10253659 | 3300025913 | Bacteria | 1658 |
| 39 | Ga0207663_10010517 | 3300025916 | Bacteria | 4930 |
| 40 | Ga0207662_10697150 | 3300025918 | Unclassified | 711 |
| 41 | Ga0207657_10113873 | 3300025919 | Unclassified | 2231 |
| 42 | Ga0207652_10221551 | 3300025921 | Bacteria | 1705 |
| 43 | Ga0207694_10121658 | 3300025924 | Bacteria | 2084 |
| 44 | Ga0207664_10015205 | 3300025929 | Bacteria | 5580 |
| 45 | Ga0207670_10013685 | 3300025936 | Bacteria | 4793 |
| 46 | Ga0207670_10786908 | 3300025936 | Unclassified | 792 |
| 47 | Ga0207711_10225568 | 3300025941 | Unclassified | 1715 |
| 48 | Ga0207667_10028229 | 3300025949 | Bacteria | 6097 |
| 49 | Ga0207667_10527628 | 3300025949 | Bacteria | 1196 |
| 50 | Ga0207702_10017866 | 3300026078 | Bacteria | 5871 |
| 51 | Ga0207702_10481897 | 3300026078 | Bacteria | 1207 |
| 52 | Ga0207674_10081133 | 3300026116 | Unclassified | 3245 |
| 53 | Ga0207674_10310568 | 3300026116 | Bacteria | 1526 |
| 54 | Ga0268265_10291597 | 3300028380 | Bacteria | 1465 |
| 55 | Ga0265337_1000266 | 3300028556 | Bacteria | 28423 |
| 56 | Ga0265337_1000357 | 3300028556 | Bacteria | 24458 |
| 57 | Ga0265337_1004201 | 3300028556 | Bacteria | 6038 |
| 58 | Ga0265337_1004899 | 3300028556 | Bacteria | 5452 |
| 59 | Ga0265326_10013030 | 3300028558 | Unclassified | 2436 |
| 60 | Ga0265326_10034041 | 3300028558 | Unclassified | 1449 |
| 61 | Ga0265326_10038058 | 3300028558 | Unclassified | 1367 |
| 62 | Ga0265319_1000001 | 3300028563 | Bacteria | 549513 |
| 63 | Ga0265319_1011832 | 3300028563 | Unclassified | 3552 |
| 64 | Ga0265319_1041848 | 3300028563 | Unclassified | 1543 |
| 65 | Ga0265334_10011827 | 3300028573 | Bacteria | 3668 |
| 66 | Ga0265334_10067798 | 3300028573 | Unclassified | 1333 |
| 67 | Ga0265318_10041934 | 3300028577 | Bacteria | 1738 |
| 68 | Ga0265323_10027236 | 3300028653 | Bacteria | 2148 |
| 69 | Ga0265322_10012583 | 3300028654 | Bacteria | 2449 |
| 70 | Ga0265336_10000634 | 3300028666 | Bacteria | 19344 |
| 71 | Ga0265336_10129213 | 3300028666 | Bacteria | 752 |
| 72 | Ga0265338_10000050 | 3300028800 | Bacteria | 213659 |
| 73 | Ga0265338_10000160 | 3300028800 | Bacteria | 122713 |
| 74 | Ga0265338_10000310 | 3300028800 | Bacteria | 88170 |
| 75 | Ga0265338_10000513 | 3300028800 | Bacteria | 68145 |
| 76 | Ga0265338_10000959 | 3300028800 | Bacteria | 48640 |
| 77 | Ga0265338_10002673 | 3300028800 | Bacteria | 26210 |
| 78 | Ga0265338_10007456 | 3300028800 | Bacteria | 13572 |
| 79 | Ga0265338_10020978 | 3300028800 | Bacteria | 6835 |
| 80 | Ga0265338_10053979 | 3300028800 | Bacteria | 3588 |
| 81 | Ga0265338_10058624 | 3300028800 | Bacteria | 3397 |
| 82 | Ga0265338_10073131 | 3300028800 | Unclassified | 2923 |
| 83 | Ga0265338_10170100 | 3300028800 | Bacteria | 1672 |
| 84 | Ga0265338_10184493 | 3300028800 | Unclassified | 1587 |
| 85 | Ga0265324_10000890 | 3300029957 | Bacteria | 19005 |
| 86 | Ga0265324_10008534 | 3300029957 | Bacteria | 4066 |
| 87 | Ga0265324_10016129 | 3300029957 | Bacteria | 2735 |
| 88 | Ga0265320_10000544 | 3300031240 | Bacteria | 29113 |
| 89 | Ga0265320_10008939 | 3300031240 | Bacteria | 6085 |
| 90 | Ga0265320_10010352 | 3300031240 | Bacteria | 5559 |
| 91 | Ga0265320_10032753 | 3300031240 | Bacteria | 2658 |
| 92 | Ga0265320_10100169 | 3300031240 | Bacteria | 1335 |
| 93 | Ga0265320_10170865 | 3300031240 | Unclassified | 977 |
| 94 | Ga0265320_10278343 | 3300031240 | Bacteria | 741 |
| 95 | Ga0265329_10003757 | 3300031242 | Bacteria | 6526 |
| 96 | Ga0265340_10008808 | 3300031247 | Bacteria | 5439 |
| 97 | Ga0265340_10023599 | 3300031247 | Bacteria | 3135 |
| 98 | Ga0265340_10061555 | 3300031247 | Bacteria | 1795 |
| 99 | Ga0265339_10035031 | 3300031249 | Unclassified | 2819 |
| 100 | Ga0265339_10099093 | 3300031249 | Bacteria | 1519 |
| 101 | Ga0265331_10154015 | 3300031250 | Unclassified | 1043 |
| 102 | Ga0265327_10002168 | 3300031251 | Bacteria | 21606 |
| 103 | Ga0265316_10027136 | 3300031344 | Bacteria | 4748 |
| 104 | Ga0265316_10083037 | 3300031344 | Unclassified | 2454 |
| 105 | Ga0265316_10120872 | 3300031344 | Bacteria | 1978 |
| 106 | Ga0265316_10684929 | 3300031344 | Unclassified | 723 |
| 107 | Ga0265313_10001166 | 3300031595 | Bacteria | 25120 |
| 108 | Ga0265314_10000142 | 3300031711 | Bacteria | 108299 |
| 109 | Ga0265314_10033795 | 3300031711 | Bacteria | 3743 |
| 110 | Ga0265314_10090815 | 3300031711 | Unclassified | 1989 |
| 111 | Ga0265314_10182898 | 3300031711 | Bacteria | 1254 |
| 112 | Ga0265314_10253886 | 3300031711 | Bacteria | 1008 |
| 113 | Ga0265342_10237784 | 3300031712 | Bacteria | 976 |
| 114 | Ga0373953_0090916 | 3300035117 | Bacteria | 1277 |
| 115 | Ga0373954_0021883 | 3300035118 | Bacteria | 2897 |
| 116 | Ga0373954_0047556 | 3300035118 | Bacteria | 2008 |
| 117 | Ga0373956_0083150 | 3300035119 | Bacteria | 1471 |
| 118 | Ga0373955_0097133 | 3300035172 | Bacteria | 1687 |
| 119 | Ga0373933_0244590 | 3300035724 | Bacteria | 1154 |
| 120 | Ga0373937_0030325 | 3300036401 | Bacteria | 4899 |
| 121 | Ga0373937_0143823 | 3300036401 | Bacteria | 2232 |
| 122 | Ga0395900_0226773 | 3300037418 | Bacteria | 1881 |
| 123 | Ga0395905_0056888 | 3300037471 | Bacteria | 3658 |
| 124 | Ga0451577_0026521 | 3300042876 | Bacteria | 5248 |
| 125 | Ga0451576_0038434 | 3300045051 | Bacteria | 5065 |
| 126 | Ga0451576_0188554 | 3300045051 | Unclassified | 2154 |
| 127 | Ga0451576_0218425 | 3300045051 | Bacteria | 1991 |
| 128 | Ga0451576_0265894 | 3300045051 | Unclassified | 1793 |
| 129 | Ga0451576_0614843 | 3300045051 | Bacteria | 1142 |
| 130 | Ga0495592_0000035 | 3300046454 | Bacteria | 125802 |
| 131 | Ga0495592_0005244 | 3300046454 | Bacteria | 9555 |
| 132 | Ga0495592_0085671 | 3300046454 | Bacteria | 2271 |
| 133 | Ga0495629_0074191 | 3300046459 | Bacteria | 2376 |
| 134 | Ga0495664_0062950 | 3300046477 | Unclassified | 2210 |
| 135 | Ga0495618_0052264 | 3300046514 | Unclassified | 2582 |
| 136 | Ga0495618_0239622 | 3300046514 | Unclassified | 1140 |
| 137 | Ga0495628_0000046 | 3300046516 | Bacteria | 97902 |
| 138 | Ga0495630_0007026 | 3300046517 | Bacteria | 8022 |
| 139 | Ga0495630_0176097 | 3300046517 | Bacteria | 1630 |
| 140 | Ga0495630_0192590 | 3300046517 | Unclassified | 1555 |
| 141 | Ga0495586_0003486 | 3300046535 | Bacteria | 8434 |
| 142 | Ga0495586_0024007 | 3300046535 | Unclassified | 3256 |
| 143 | Ga0495645_0005129 | 3300046543 | Bacteria | 8976 |
| 144 | Ga0495645_0056492 | 3300046543 | Unclassified | 2850 |
| 145 | Ga0495645_0188566 | 3300046543 | Bacteria | 1407 |
| 146 | Ga0495634_0013935 | 3300046642 | Bacteria | 5810 |
| 147 | Ga0495634_0067344 | 3300046642 | Bacteria | 2369 |
| 148 | Ga0495599_0245396 | 3300046678 | Bacteria | 1091 |
| 149 | Ga0495613_0057545 | 3300046689 | Bacteria | 2854 |
| 150 | Ga0495624_0014454 | 3300046690 | Bacteria | 5356 |
| 151 | Ga0495680_0070826 | 3300047322 | Bacteria | 2657 |
| 152 | Ga0495684_0144627 | 3300047471 | Unclassified | 1781 |
| 153 | Ga0501036_0745235 | 3300049572 | Unclassified | 808 |
| 154 | nmdc:mga09592_538457_c1 | 3300050508 | Unclassified | 1003 |
| 155 | nmdc:mga06r32_139587_c1 | 3300050510 | Bacteria | 2399 |
| 156 | Ga0495601_0103348 | 3300053077 | Bacteria | 1842 |
| 157 | Ga0500650_0065489 | 3300053098 | Unclassified | 1697 |
| 158 | Ga0207707_10304894 | |||
| 159 | rootH2_10000391 | |||
| 160 | rootH1_10183528 | |||
| 161 | Ga0065707_10170800 | |||
| 162 | Ga0070683_100217147 | |||
| 163 | Ga0070690_100000407 | |||
| 164 | Ga0070660_100049061 | |||
| 165 | Ga0070689_100013039 | |||
| 166 | Ga0070689_100179275 | |||
| 167 | Ga0070687_100583927 | |||
| 168 | Ga0070669_100368602 | |||
| 169 | Ga0070714_100001234 | |||
| 170 | Ga0070701_10222175 | |||
| 171 | Ga0070711_100016416 | |||
| 172 | Ga0070681_10368504 | |||
| 173 | Ga0070679_100188228 | |||
| 174 | Ga0068855_100031095 | |||
| 175 | Ga0068855_100195032 | |||
| 176 | Ga0068856_100070238 | |||
| 177 | Ga0068856_100311597 | |||
| 178 | Ga0068859_100122883 | |||
| 179 | Ga0068864_100542423 | |||
| 180 | Ga0068863_100286805 | |||
| 181 | Ga0075433_10356588 | |||
| 182 | Ga0097620_100001997 | |||
| 183 | Ga0097620_100122880 | |||
| 184 | Ga0097620_100573125 | |||
| 185 | Ga0105240_10123199 | |||
| 186 | Ga0105240_10134916 | |||
| 187 | Ga0105248_10354864 | |||
| 188 | Ga0105238_10076002 | |||
| 189 | Ga0105238_10418799 | |||
| 190 | Ga0105238_10610166 | |||
| 191 | Ga0157378_10113570 | |||
| 192 | Ga0157372_10170649 | |||
| 193 | Ga0163163_10140134 | |||
| 194 | Ga0157380_10519994 | |||
| 195 | Ga0207695_10253659 | |||
| 196 | Ga0207663_10010517 | |||
| 197 | Ga0207662_10697150 | |||
| 198 | Ga0207657_10113873 | |||
| 199 | Ga0207652_10221551 | |||
| 200 | Ga0207694_10121658 | |||
| 201 | Ga0207664_10015205 | |||
| 202 | Ga0207670_10013685 | |||
| 203 | Ga0207670_10786908 | |||
| 204 | Ga0207711_10225568 | |||
| 205 | Ga0207667_10028229 | |||
| 206 | Ga0207667_10527628 | |||
| 207 | Ga0207702_10017866 | |||
| 208 | Ga0207702_10481897 | |||
| 209 | Ga0207674_10081133 | |||
| 210 | Ga0207674_10310568 | |||
| 211 | Ga0268265_10291597 | |||
| 212 | Ga0265337_1000266 | |||
| 213 | Ga0265337_1000357 | |||
| 214 | Ga0265337_1004201 | |||
| 215 | Ga0265337_1004899 | |||
| 216 | Ga0265326_10013030 | |||
| 217 | Ga0265326_10034041 | |||
| 218 | Ga0265326_10038058 | |||
| 219 | Ga0265319_1000001 | |||
| 220 | Ga0265319_1011832 | |||
| 221 | Ga0265319_1041848 | |||
| 222 | Ga0265334_10011827 | |||
| 223 | Ga0265334_10067798 | |||
| 224 | Ga0265318_10041934 | |||
| 225 | Ga0265323_10027236 | |||
| 226 | Ga0265322_10012583 | |||
| 227 | Ga0265336_10000634 | |||
| 228 | Ga0265336_10129213 | |||
| 229 | Ga0265338_10000050 | |||
| 230 | Ga0265338_10000160 | |||
| 231 | Ga0265338_10000310 | |||
| 232 | Ga0265338_10000513 | |||
| 233 | Ga0265338_10000959 | |||
| 234 | Ga0265338_10002673 | |||
| 235 | Ga0265338_10007456 | |||
| 236 | Ga0265338_10020978 | |||
| 237 | Ga0265338_10053979 | |||
| 238 | Ga0265338_10058624 | |||
| 239 | Ga0265338_10073131 | |||
| 240 | Ga0265338_10170100 | |||
| 241 | Ga0265338_10184493 | |||
| 242 | Ga0265324_10000890 | |||
| 243 | Ga0265324_10008534 | |||
| 244 | Ga0265324_10016129 | |||
| 245 | Ga0265320_10000544 | |||
| 246 | Ga0265320_10008939 | |||
| 247 | Ga0265320_10010352 | |||
| 248 | Ga0265320_10032753 | |||
| 249 | Ga0265320_10100169 | |||
| 250 | Ga0265320_10170865 | |||
| 251 | Ga0265320_10278343 | |||
| 252 | Ga0265329_10003757 | |||
| 253 | Ga0265340_10008808 | |||
| 254 | Ga0265340_10023599 | |||
| 255 | Ga0265340_10061555 | |||
| 256 | Ga0265339_10035031 | |||
| 257 | Ga0265339_10099093 | |||
| 258 | Ga0265331_10154015 | |||
| 259 | Ga0265327_10002168 | |||
| 260 | Ga0265316_10027136 | |||
| 261 | Ga0265316_10083037 | |||
| 262 | Ga0265316_10120872 | |||
| 263 | Ga0265316_10684929 | |||
| 264 | Ga0265313_10001166 | |||
| 265 | Ga0265314_10000142 | |||
| 266 | Ga0265314_10033795 | |||
| 267 | Ga0265314_10090815 | |||
| 268 | Ga0265314_10182898 | |||
| 269 | Ga0265314_10253886 | |||
| 270 | Ga0265342_10237784 | |||
| 271 | Ga0373953_0090916 | |||
| 272 | Ga0373954_0021883 | |||
| 273 | Ga0373954_0047556 | |||
| 274 | Ga0373956_0083150 | |||
| 275 | Ga0373955_0097133 | |||
| 276 | Ga0373933_0244590 | |||
| 277 | Ga0373937_0030325 | |||
| 278 | Ga0373937_0143823 | |||
| 279 | Ga0395900_0226773 | |||
| 280 | Ga0395905_0056888 | |||
| 281 | Ga0451577_0026521 | |||
| 282 | Ga0451576_0038434 | |||
| 283 | Ga0451576_0188554 | |||
| 284 | Ga0451576_0218425 | |||
| 285 | Ga0451576_0265894 | |||
| 286 | Ga0451576_0614843 | |||
| 287 | Ga0495592_0000035 | |||
| 288 | Ga0495592_0005244 | |||
| 289 | Ga0495592_0085671 | |||
| 290 | Ga0495629_0074191 | |||
| 291 | Ga0495664_0062950 | |||
| 292 | Ga0495618_0052264 | |||
| 293 | Ga0495618_0239622 | |||
| 294 | Ga0495628_0000046 | |||
| 295 | Ga0495630_0007026 | |||
| 296 | Ga0495630_0176097 | |||
| 297 | Ga0495630_0192590 | |||
| 298 | Ga0495586_0003486 | |||
| 299 | Ga0495586_0024007 | |||
| 300 | Ga0495645_0005129 | |||
| 301 | Ga0495645_0056492 | |||
| 302 | Ga0495645_0188566 | |||
| 303 | Ga0495634_0013935 | |||
| 304 | Ga0495634_0067344 | |||
| 305 | Ga0495599_0245396 | |||
| 306 | Ga0495613_0057545 | |||
| 307 | Ga0495624_0014454 | |||
| 308 | Ga0495680_0070826 | |||
| 309 | Ga0495684_0144627 | |||
| 310 | Ga0501036_0745235 | |||
| 311 | nmdc:mga09592_538457_c1 | |||
| 312 | nmdc:mga06r32_139587_c1 | |||
| 313 | Ga0495601_0103348 | |||
| 314 | Ga0500650_0065489 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3zo6-assembly1.cif.gz_B | crystal structure of bacillus pseudofirmus of4 mutant atp synthase c12 ring. | 0.8386 | 101 | 165 |
| 3zo6-assembly1.cif.gz_E | crystal structure of bacillus pseudofirmus of4 mutant atp synthase c12 ring. | 0.8337 | 101 | 164 |
| 5zfv-assembly1.cif.gz_A | structure of the exbb/exbd pentameric complex (exbb5exbd1tm) | 0.8154 | 2 | 194 |
| 6ysl-assembly1.cif.gz_G | structure of the flagellar motab stator complex from bacillus subtilis | 0.8088 | 58 | 191 |
| 5zfv-assembly1.cif.gz_A | structure of the exbb/exbd pentameric complex (exbb5exbd1tm) | 0.801 | 2 | 194 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4cbjB00 | Mainly Alpha;Up-down Bundle;F1FO ATP Synthase;F1F0 ATP synthase subunit C | 0.8458 | 108 | 164 | 1.20.20.10 |
| 2x2vA00 | Mainly Alpha;Up-down Bundle;F1FO ATP Synthase;F1F0 ATP synthase subunit C | 0.8389 | 101 | 164 | 1.20.20.10 |
| 2x2vC00 | Mainly Alpha;Up-down Bundle;F1FO ATP Synthase;F1F0 ATP synthase subunit C | 0.8356 | 101 | 164 | 1.20.20.10 |
| 4cbjG00 | Mainly Alpha;Up-down Bundle;F1FO ATP Synthase;F1F0 ATP synthase subunit C | 0.8327 | 108 | 166 | 1.20.20.10 |
| 2x2vA00 | Mainly Alpha;Up-down Bundle;F1FO ATP Synthase;F1F0 ATP synthase subunit C | 0.7865 | 101 | 164 | 1.20.20.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2E8UKM0-F1-model_v4 | Biopolymer transporter ExbB | 0.9427 | 1 | 196 |
GO:0005886
GO:0017038 |
| AF-A0A831XPV9-F1-model_v4 | MotA/TolQ/ExbB proton channel family protein | 0.9412 | 9 | 195 |
GO:0005886
GO:0017038 |
| AF-A0A2E8UKM0-F1-model_v4 | Biopolymer transporter ExbB | 0.9335 | 1 | 196 |
GO:0005886
GO:0017038 |
| AF-A0A7V1JDN1-F1-model_v4 | MotA/TolQ/ExbB proton channel family protein | 0.931 | 2 | 191 |
GO:0005886
GO:0017038 |
| AF-A0A2E5TU30-F1-model_v4 | Biopolymer transporter ExbB | 0.9294 | 1 | 196 |
GO:0005886
GO:0017038 |