F226689

General Info

Members Datasets Scaffolds Average Seq Length
157 81 314 421

Family's Representative Sequence

Representative Sequence 3300005456|Ga0070678_100084077|Ga0070678_1000840772
Length 470
Sequence VGLERQHHNVTLAILTLAGAAFSLQQTMVFPALRTFQDAFGSSTAWTTWILTGFLVSGAVLTPILGRLGDQFGKERLLLISLGLFLAGCVAASFAWSLWSLIAFRVVSGAGGALFPLSFAIIRDEFPADKVKVGIGLLSAVWGVGGGFGIVLSGLIVDNFSWRYLFLLGSIPVALSLVLVHRYVPESPIRSPSKVDVPGALLLSGALISLMLALTEGEDWGWGSPRLVGVLALAVAFFVLWGVVEARSSSPMVDLRMLAHRPILLTNIATLISGFALFSCFVLVPTFVESNSSNGYGFSASATVAGLYLLPSSLAMLVAGPLAGAIGRRYGSKWTLATGMLVVSVAALLFATMHADPVPVLLASALLGLGVGAAFASMAGLIADNVDPREMGVASGMNTVVRMIGAVVGGQVGAALLTARTIGDTSVPAESAFTITFALSSSRPQLRQLAIVPTPARASSARTSPVRPQG

Samples

Sample ID Description Type Environment
1 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
18 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
23 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
24 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
25 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
26 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
27 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
28 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
29 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
30 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
31 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
32 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
33 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
34 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
35 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
36 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
37 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
38 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
39 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
40 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
41 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
42 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
43 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
44 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
45 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
46 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
47 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
48 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
49 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
50 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
52 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
58 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
59 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
60 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
61 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
62 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
63 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
64 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
65 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
66 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
67 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
68 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
69 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
70 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
71 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
72 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
74 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
75 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
76 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
77 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
78 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
79 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
80 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
81 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.27
Nodule 0
Rhizoplane 5.1
Rhizosphere 91.72
Stem 0
Stem Tuber 0
Unclassified 3.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070678_100084077 3300005456 Bacteria 2421
2 JGI25407J50210_10001675 3300003373 Bacteria 5071
3 Ga0070658_10045257 3300005327 Bacteria 3558
4 Ga0070660_100044277 3300005339 Bacteria 3403
5 Ga0070659_100127122 3300005366 Bacteria 2068
6 Ga0070681_10151622 3300005458 Bacteria 2244
7 Ga0070706_100058566 3300005467 Bacteria 3555
8 Ga0070707_100002087 3300005468 Bacteria 19153
9 Ga0070707_100049206 3300005468 Bacteria 4039
10 Ga0070698_100020774 3300005471 Bacteria 6881
11 Ga0070698_100146191 3300005471 Bacteria 2313
12 Ga0070699_100001614 3300005518 Bacteria 20560
13 Ga0070699_100003986 3300005518 Bacteria 13044
14 Ga0081455_10003194 3300005937 Bacteria 18994
15 Ga0081455_10090593 3300005937 Bacteria 2479
16 Ga0081455_10091777 3300005937 Bacteria 2459
17 Ga0081538_10003614 3300005981 Bacteria 14531
18 Ga0081538_10043518 3300005981 Unclassified 2817
19 Ga0081538_10068166 3300005981 Unclassified 1980
20 Ga0081539_10000062 3300005985 Bacteria 249871
21 Ga0075364_10014585 3300006051 Bacteria 4857
22 Ga0111539_10013407 3300009094 Bacteria 10248
23 Ga0114129_10025549 3300009147 Bacteria 8367
24 Ga0114129_10152582 3300009147 Bacteria 3161
25 Ga0157369_10004188 3300013105 Bacteria 17087
26 Ga0207684_10044561 3300025910 Bacteria 3762
27 Ga0207657_10002962 3300025919 Bacteria 18203
28 Ga0207646_10005007 3300025922 Bacteria 14119
29 Ga0207683_10051664 3300026121 Bacteria 3602
30 Ga0207428_10007275 3300027907 Bacteria 10119
31 Ga0265338_10046384 3300028800 Bacteria 3983
32 Ga0307416_100175519 3300032002 Bacteria 2001
33 Ga0395899_0007674 3300037312 Bacteria 8319
34 Ga0395899_0008339 3300037312 Bacteria 7979
35 Ga0395899_0015755 3300037312 Bacteria 5763
36 Ga0395899_0018092 3300037312 Bacteria 5363
37 Ga0395899_0075609 3300037312 Unclassified 2459
38 Ga0395900_0002215 3300037418 Bacteria 21712
39 Ga0395900_0011306 3300037418 Bacteria 9131
40 Ga0395900_0022894 3300037418 Bacteria 6393
41 Ga0395900_0032207 3300037418 Bacteria 5389
42 Ga0395900_0064868 3300037418 Bacteria 3751
43 Ga0395900_0075582 3300037418 Bacteria 3463
44 Ga0395900_0138366 3300037418 Unclassified 2494
45 Ga0395898_0002309 3300037466 Bacteria 22851
46 Ga0395898_0003072 3300037466 Bacteria 18922
47 Ga0395898_0006398 3300037466 Bacteria 12572
48 Ga0395898_0011566 3300037466 Bacteria 9164
49 Ga0395898_0036921 3300037466 Bacteria 4849
50 Ga0395898_0079703 3300037466 Bacteria 3159
51 Ga0395905_0002136 3300037471 Bacteria 22428
52 Ga0395905_0003158 3300037471 Bacteria 17749
53 Ga0395905_0016081 3300037471 Bacteria 7112
54 Ga0395905_0023930 3300037471 Bacteria 5766
55 Ga0395905_0028069 3300037471 Bacteria 5306
56 Ga0395905_0063818 3300037471 Bacteria 3446
57 Ga0395905_0064701 3300037471 Bacteria 3423
58 Ga0395901_0004338 3300038443 Bacteria 14312
59 Ga0395901_0005084 3300038443 Bacteria 13281
60 Ga0395901_0027561 3300038443 Bacteria 5838
61 Ga0395901_0052244 3300038443 Bacteria 4247
62 Ga0395901_0090963 3300038443 Bacteria 3194
63 Ga0451793_0662819 3300041452 Bacteria 2666
64 Ga0451800_0894246 3300041459 Bacteria 1458
65 Ga0451804_0382517 3300041463 Bacteria 4714
66 Ga0451807_1492824 3300041486 Bacteria 2282
67 Ga0451839_0525102 3300041496 Bacteria 2448
68 Ga0451847_0360574 3300041503 Bacteria 1761
69 Ga0451855_2061026 3300041511 Bacteria 1933
70 Ga0439433_0011708 3300041999 Bacteria 1923
71 Ga0439446_0006209 3300042156 Bacteria 3105
72 Ga0439446_0024489 3300042156 Bacteria 1722
73 Ga0439434_0025431 3300042435 Bacteria 1786
74 Ga0439434_0033869 3300042435 Bacteria 1558
75 Ga0495596_0032334 3300046500 Bacteria 2087
76 Ga0495589_0053889 3300046794 Bacteria 1984
77 Ga0496102_0022571 3300048905 Bacteria 5577
78 Ga0496112_0014474 3300048915 Bacteria 7322
79 Ga0496112_0020349 3300048915 Bacteria 6289
80 Ga0496112_0244450 3300048915 Bacteria 1747
81 Ga0501031_0012464 3300049568 Bacteria 5546
82 Ga0501031_0053162 3300049568 Bacteria 2639
83 Ga0501033_0011946 3300049570 Bacteria 6634
84 Ga0501034_0274869 3300049571 Bacteria 1625
85 Ga0501036_0007312 3300049572 Bacteria 8995
86 Ga0501036_0008530 3300049572 Bacteria 8403
87 Ga0501038_0002309 3300049574 Bacteria 17732
88 Ga0501038_0006842 3300049574 Bacteria 10532
89 Ga0501038_0025349 3300049574 Bacteria 5287
90 Ga0501039_0012662 3300049575 Bacteria 6446
91 Ga0501040_0027398 3300049576 Bacteria 3836
92 Ga0501041_0005537 3300049577 Bacteria 7386
93 Ga0501041_0078708 3300049577 Bacteria 2029
94 Ga0501042_0002282 3300049578 Bacteria 11710
95 Ga0501042_0013469 3300049578 Bacteria 5566
96 Ga0501042_0020359 3300049578 Bacteria 4617
97 Ga0501042_0028117 3300049578 Unclassified 3958
98 Ga0501043_0018370 3300049579 Bacteria 5482
99 Ga0501046_0015483 3300049580 Bacteria 6405
100 Ga0501046_0016102 3300049580 Bacteria 6269
101 Ga0501047_0112781 3300049581 Bacteria 2601
102 Ga0501047_0191967 3300049581 Bacteria 1905
103 Ga0501048_0037086 3300049582 Bacteria 3501
104 Ga0501048_0046450 3300049582 Bacteria 3099
105 Ga0501067_0029962 3300049583 Bacteria 3017
106 Ga0501068_0019661 3300049584 Bacteria 3925
107 Ga0501069_0001533 3300049585 Bacteria 11424
108 Ga0501070_0021184 3300049586 Bacteria 5456
109 Ga0501070_0041136 3300049586 Bacteria 3850
110 Ga0501070_0044328 3300049586 Bacteria 3702
111 Ga0501070_0058611 3300049586 Bacteria 3192
112 Ga0501071_0001603 3300049587 Bacteria 13269
113 Ga0501071_0037849 3300049587 Bacteria 3446
114 Ga0501072_0077203 3300049588 Bacteria 2636
115 Ga0501072_0180318 3300049588 Bacteria 1685
116 Ga0501073_0033534 3300049589 Bacteria 3656
117 Ga0501074_0015072 3300049590 Bacteria 5624
118 Ga0501074_0033564 3300049590 Bacteria 3720
119 Ga0501075_0003119 3300049591 Bacteria 11078
120 Ga0501075_0005559 3300049591 Bacteria 8624
121 Ga0501075_0016342 3300049591 Bacteria 5343
122 Ga0501075_0195466 3300049591 Bacteria 1543
123 Ga0501076_0008852 3300049592 Bacteria 7401
124 Ga0501076_0016925 3300049592 Bacteria 5534
125 Ga0501076_0030868 3300049592 Bacteria 4175
126 Ga0501076_0139527 3300049592 Bacteria 1969
127 Ga0501077_0002428 3300049593 Bacteria 11165
128 Ga0501077_0032766 3300049593 Bacteria 3309
129 Ga0501079_0003749 3300049741 Bacteria 11217
130 Ga0501079_0025960 3300049741 Bacteria 4492
131 Ga0501079_0085192 3300049741 Bacteria 2445
132 Ga0501080_0049763 3300049742 Bacteria 3901
133 Ga0501080_0147880 3300049742 Bacteria 2172
134 Ga0501081_0070403 3300049743 Bacteria 2437
135 Ga0501083_0110724 3300049744 Bacteria 1806
136 Ga0501035_0027930 3300049822 Bacteria 5155
137 Ga0501035_0114098 3300049822 Bacteria 2366
138 Ga0501045_0024388 3300049824 Bacteria 4342
139 Ga0501045_0025688 3300049824 Bacteria 4235
140 Ga0501045_0101485 3300049824 Bacteria 2130
141 nmdc:mga00v17_7346_c1 3300050491 Bacteria 5872
142 nmdc:mga05p37_34920_c1 3300050507 Bacteria 6162
143 nmdc:mga05p37_67136_c1 3300050507 Bacteria 4412
144 nmdc:mga05p37_78068_c1 3300050507 Bacteria 4077
145 nmdc:mga09592_14169_c1 3300050508 Bacteria 6505
146 nmdc:mga08y16_76597_c1 3300050511 Bacteria 3486
147 nmdc:mga08y16_86474_c1 3300050511 Bacteria 3267
148 nmdc:mga08y16_9588_c2 3300050511 Bacteria 9348
149 Ga0501084_0002823 3300054114 Bacteria 14023
150 Ga0501084_0047797 3300054114 Bacteria 3583
151 Ga0501084_0087626 3300054114 Unclassified 2614
152 Ga0501084_0138822 3300054114 Bacteria 2046
153 Ga0590075_008348 3300059424 Bacteria 2473
154 Ga0501082_0005566 3300060353 Bacteria 10937
155 Ga0501082_0036991 3300060353 Bacteria 4205
156 Ga0501082_0079707 3300060353 Bacteria 2825
157 Ga0530510_0044267 3300061734 Bacteria 3216
158 Ga0070678_100084077
159 JGI25407J50210_10001675
160 Ga0070658_10045257
161 Ga0070660_100044277
162 Ga0070659_100127122
163 Ga0070681_10151622
164 Ga0070706_100058566
165 Ga0070707_100002087
166 Ga0070707_100049206
167 Ga0070698_100020774
168 Ga0070698_100146191
169 Ga0070699_100001614
170 Ga0070699_100003986
171 Ga0081455_10003194
172 Ga0081455_10090593
173 Ga0081455_10091777
174 Ga0081538_10003614
175 Ga0081538_10043518
176 Ga0081538_10068166
177 Ga0081539_10000062
178 Ga0075364_10014585
179 Ga0111539_10013407
180 Ga0114129_10025549
181 Ga0114129_10152582
182 Ga0157369_10004188
183 Ga0207684_10044561
184 Ga0207657_10002962
185 Ga0207646_10005007
186 Ga0207683_10051664
187 Ga0207428_10007275
188 Ga0265338_10046384
189 Ga0307416_100175519
190 Ga0395899_0007674
191 Ga0395899_0008339
192 Ga0395899_0015755
193 Ga0395899_0018092
194 Ga0395899_0075609
195 Ga0395900_0002215
196 Ga0395900_0011306
197 Ga0395900_0022894
198 Ga0395900_0032207
199 Ga0395900_0064868
200 Ga0395900_0075582
201 Ga0395900_0138366
202 Ga0395898_0002309
203 Ga0395898_0003072
204 Ga0395898_0006398
205 Ga0395898_0011566
206 Ga0395898_0036921
207 Ga0395898_0079703
208 Ga0395905_0002136
209 Ga0395905_0003158
210 Ga0395905_0016081
211 Ga0395905_0023930
212 Ga0395905_0028069
213 Ga0395905_0063818
214 Ga0395905_0064701
215 Ga0395901_0004338
216 Ga0395901_0005084
217 Ga0395901_0027561
218 Ga0395901_0052244
219 Ga0395901_0090963
220 Ga0451793_0662819
221 Ga0451800_0894246
222 Ga0451804_0382517
223 Ga0451807_1492824
224 Ga0451839_0525102
225 Ga0451847_0360574
226 Ga0451855_2061026
227 Ga0439433_0011708
228 Ga0439446_0006209
229 Ga0439446_0024489
230 Ga0439434_0025431
231 Ga0439434_0033869
232 Ga0495596_0032334
233 Ga0495589_0053889
234 Ga0496102_0022571
235 Ga0496112_0014474
236 Ga0496112_0020349
237 Ga0496112_0244450
238 Ga0501031_0012464
239 Ga0501031_0053162
240 Ga0501033_0011946
241 Ga0501034_0274869
242 Ga0501036_0007312
243 Ga0501036_0008530
244 Ga0501038_0002309
245 Ga0501038_0006842
246 Ga0501038_0025349
247 Ga0501039_0012662
248 Ga0501040_0027398
249 Ga0501041_0005537
250 Ga0501041_0078708
251 Ga0501042_0002282
252 Ga0501042_0013469
253 Ga0501042_0020359
254 Ga0501042_0028117
255 Ga0501043_0018370
256 Ga0501046_0015483
257 Ga0501046_0016102
258 Ga0501047_0112781
259 Ga0501047_0191967
260 Ga0501048_0037086
261 Ga0501048_0046450
262 Ga0501067_0029962
263 Ga0501068_0019661
264 Ga0501069_0001533
265 Ga0501070_0021184
266 Ga0501070_0041136
267 Ga0501070_0044328
268 Ga0501070_0058611
269 Ga0501071_0001603
270 Ga0501071_0037849
271 Ga0501072_0077203
272 Ga0501072_0180318
273 Ga0501073_0033534
274 Ga0501074_0015072
275 Ga0501074_0033564
276 Ga0501075_0003119
277 Ga0501075_0005559
278 Ga0501075_0016342
279 Ga0501075_0195466
280 Ga0501076_0008852
281 Ga0501076_0016925
282 Ga0501076_0030868
283 Ga0501076_0139527
284 Ga0501077_0002428
285 Ga0501077_0032766
286 Ga0501079_0003749
287 Ga0501079_0025960
288 Ga0501079_0085192
289 Ga0501080_0049763
290 Ga0501080_0147880
291 Ga0501081_0070403
292 Ga0501083_0110724
293 Ga0501035_0027930
294 Ga0501035_0114098
295 Ga0501045_0024388
296 Ga0501045_0025688
297 Ga0501045_0101485
298 nmdc:mga00v17_7346_c1
299 nmdc:mga05p37_34920_c1
300 nmdc:mga05p37_67136_c1
301 nmdc:mga05p37_78068_c1
302 nmdc:mga09592_14169_c1
303 nmdc:mga08y16_76597_c1
304 nmdc:mga08y16_86474_c1
305 nmdc:mga08y16_9588_c2
306 Ga0501084_0002823
307 Ga0501084_0047797
308 Ga0501084_0087626
309 Ga0501084_0138822
310 Ga0590075_008348
311 Ga0501082_0005566
312 Ga0501082_0036991
313 Ga0501082_0079707
314 Ga0530510_0044267

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

15

410

0.91

PF00083

Sugar_tr

Sugar (and other) transporter

15

190

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.7728 1 417
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.7226 1 417
7d5p-assembly2.cif.gz_B structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.7207 10 417
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.7103 9 417
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.6753 6 437
ID Description Score Start End Superfamily
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9567 12 194 1.20.1250.20
af_Q2FVL1_1_184_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.941 29 208 1.20.1250.20
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.94 9 179 1.20.1250.20
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9389 13 212 1.20.1250.20
af_P9WG91_8_214_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9353 10 211 1.20.1250.20
ID Description Score Start End GO Terms
AF-T0C469-F1-model_v4 deleted 0.9248 9 181
AF-A0A351EIM7-F1-model_v4 MFS transporter 0.9203 8 176 GO:0005886
GO:0022857
AF-A0A842YDF2-F1-model_v4 MFS transporter 0.9147 9 182 GO:0005886
GO:0022857
AF-A0A258Q0M2-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.912 39 193 GO:0005886
GO:0022857
AF-A0A837B534-F1-model_v4 deleted 0.9085 4 192

Map