F226101

General Info

Members Datasets Scaffolds Average Seq Length
156 134 109 387

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8008558824|8008567344
Length 460
Sequence SRPGHHHTASTLRETYATDPTHPSYSRDQSATNSGLDRDPTSEGVHTLRHMADSRTPVDPTGSATPAPSDRPVYVIGGGPGGLAVAYALRAQGVRAVVLEKADAVGASWRRHYDRLRLHTTRRLSGLPGLPMPRRFGRWVARDNVVRYLEKYAEVHQLEIVTGVEVSRVERTADDTGWLLHATGGRELTGSAVVVATGHNHTPHLPDWPGRDSYTGDLTHASAYRNAEPYAGRDVLVVGIGNTGAEIAVDLVEGGARRVRLAVRTAPHIVRRSTAGWAAQYTGVLVRRLPVALVDRLARPMAKLAVPDLSAHGLSRPDTGLYSRVNQGSIPVQDVGLIDAVRKGKVEIVGPVEGFEDGKVVLGDGGRIETDAVIAATGYRRALEGLVGHLDVLDGRGRPVVHGARSPKNAPGLYFTGFTNPISGMFRELALDAEKIAKAVARKGGVATRDALTVRVRTTP

Samples

Sample ID Description Type Environment
1 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
2 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
3 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
4 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
5 2643221548 Streptomyces sp. Root55 Isolate Unclassified
6 2643221647 Streptomyces sp. Root369 Isolate Unclassified
7 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
8 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
9 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
10 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
11 2643221714 Streptomyces sp. Root264 Isolate Unclassified
12 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
13 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
14 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
15 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
16 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
17 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
18 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
19 2808606448 Streptomyces sp. 193411 Isolate Unclassified
20 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
21 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
22 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
23 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
24 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
25 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
26 2867428634 Streptomyces sp. RP5T Isolate Unclassified
27 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
28 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
29 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
30 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
31 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
32 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
33 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
34 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
35 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
36 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
37 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
38 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
39 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
40 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
41 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
42 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
43 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
44 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
45 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
46 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
47 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
48 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
49 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
52 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
60 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
61 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
62 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
63 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
66 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
67 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
73 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
74 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
75 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
76 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
77 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
78 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
79 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
80 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
81 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
82 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
85 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
90 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
93 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
94 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
102 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
110 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
111 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
112 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
129 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
130 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
131 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
132 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
133 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
134 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.31
Metatranscriptomes 2.56
Isolates 30.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.85
Nodule 1.28
Rhizoplane 0.64
Rhizosphere 64.74
Stem 0
Stem Tuber 0
Unclassified 29.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10000615 3300003316 Bacteria 27370
2 rootH2_10029866 3300003320 Bacteria 9356
3 rootL2_10085905 3300003322 Bacteria 2790
4 rootH1_10052130 3300003323 Bacteria 1533
5 Ga0006562J51391_1063331 3300003578 Bacteria 7100
6 Ga0006562J51391_1063333 3300003578 Bacteria 2311
7 Ga0006562J51391_1146285 3300003578 Bacteria 4930
8 Ga0006562J51391_1146286 3300003578 Bacteria 4754
9 Ga0068853_100012504 3300005539 Bacteria 6905
10 Ga0081455_10079523 3300005937 Bacteria 2691
11 Ga0075368_10003039 3300006042 Bacteria 5553
12 Ga0075367_10004307 3300006178 Bacteria 6920
13 Ga0105246_10006981 3300011119 Bacteria 6907
14 Ga0157369_10083496 3300013105 Bacteria 3416
15 Ga0157380_10136191 3300014326 Bacteria 2102
16 Ga0182008_10001716 3300014497 Bacteria 14386
17 Ga0183367_1005 3300015688 Bacteria 652063
18 Ga0207647_10054029 3300025904 Bacteria 2473
19 Ga0209813_10001682 3300027866 Bacteria 4980
20 Ga0307517_10011791 3300028786 Bacteria 12084
21 Ga0268256_1013845 3300030500 Bacteria 2421
22 Ga0307511_10004918 3300030521 Bacteria 13631
23 Ga0307512_10005510 3300030522 Bacteria 13193
24 Ga0307512_10057139 3300030522 Bacteria 3055
25 Ga0307513_10189986 3300031456 Bacteria 1906
26 Ga0307509_10019167 3300031507 Bacteria 7818
27 Ga0307508_10012862 3300031616 Bacteria 7652
28 Ga0307514_10004391 3300031649 Bacteria 12988
29 Ga0307514_10107000 3300031649 Bacteria 1993
30 Ga0307516_10023651 3300031730 Bacteria 6289
31 Ga0307518_10009476 3300031838 Bacteria 6947
32 Ga0307507_10006857 3300033179 Bacteria 17009
33 Ga0307510_10058766 3300033180 Bacteria 3978
34 Ga0439436_0001116 3300041404 Bacteria 7586
35 Ga0451853_1060785 3300041512 Bacteria 7814
36 Ga0439449_0014347 3300042007 Bacteria 2978
37 Ga0439457_000937 3300042014 Bacteria 8759
38 Ga0439457_004334 3300042014 Bacteria 3718
39 Ga0450894_000662 3300042131 Bacteria 5748
40 Ga0450899_000881 3300042135 Bacteria 3420
41 Ga0450903_000759 3300042138 Bacteria 6331
42 Ga0450906_001158 3300042145 Bacteria 5824
43 Ga0439458_0000007 3300042157 Bacteria 30099
44 Ga0450908_012416 3300042184 Bacteria 1545
45 Ga0450901_005367 3300042533 Bacteria 1318
46 Ga0466969_0024715 3300044656 Bacteria 3090
47 Ga0466972_0006805 3300044658 Bacteria 5738
48 Ga0466972_0013815 3300044658 Bacteria 4053
49 Ga0466965_0010858 3300044683 Bacteria 4261
50 Ga0466966_0004852 3300044684 Bacteria 8848
51 Ga0466961_0000287 3300044693 Bacteria 33454
52 Ga0466961_0006252 3300044693 Bacteria 7563
53 Ga0466963_0001828 3300044694 Bacteria 11592
54 Ga0466964_0030816 3300044706 Bacteria 2124
55 Ga0466971_0016513 3300044719 Bacteria 3258
56 Ga0466971_0026436 3300044719 Bacteria 2594
57 Ga0466968_0010917 3300044735 Bacteria 3530
58 Ga0466970_0025788 3300044765 Bacteria 3079
59 Ga0466957_0005703 3300044842 Bacteria 7000
60 Ga0466960_0031920 3300044901 Bacteria 2433
61 Ga0466959_0004411 3300045049 Bacteria 9418
62 Ga0466959_0083523 3300045049 Bacteria 2300
63 Ga0466958_0003352 3300045836 Bacteria 8303
64 Ga0466967_0004174 3300045976 Bacteria 9668
65 Ga0466967_0065672 3300045976 Bacteria 3230
66 Ga0466967_0239719 3300045976 Bacteria 1730
67 Ga0495629_0004227 3300046459 Bacteria 10770
68 Ga0495629_0004917 3300046459 Bacteria 10031
69 Ga0495639_0076408 3300046475 Bacteria 1553
70 Ga0495606_0024242 3300046507 Bacteria 4377
71 Ga0495610_0022523 3300046512 Bacteria 3444
72 Ga0495620_0008485 3300046515 Bacteria 5512
73 Ga0495648_0036940 3300046524 Bacteria 3144
74 Ga0495640_0010277 3300046533 Bacteria 7239
75 Ga0495609_0017959 3300046538 Bacteria 3282
76 Ga0495613_0006251 3300046689 Bacteria 8907
77 Ga0495660_0059253 3300046810 Bacteria 2059
78 Ga0495676_0003128 3300047321 Bacteria 14969
79 Ga0495685_002168 3300047447 Bacteria 6097
80 Ga0495593_0087461 3300047673 Bacteria 1607
81 Ga0495614_0002312 3300048089 Bacteria 8473
82 Ga0495626_0008170 3300048091 Bacteria 5766
83 Ga0496111_0026460 3300048914 Bacteria 4097
84 Ga0501032_0012863 3300049569 Bacteria 5966
85 Ga0501032_0024128 3300049569 Bacteria 4200
86 Ga0501033_0035755 3300049570 Bacteria 3723
87 Ga0501034_0008962 3300049571 Bacteria 10517
88 Ga0501036_0027411 3300049572 Bacteria 4813
89 Ga0501037_0135705 3300049573 Bacteria 1762
90 Ga0501037_0170434 3300049573 Bacteria 1547
91 Ga0501038_0027795 3300049574 Bacteria 5028
92 Ga0501039_0189923 3300049575 Bacteria 1615
93 Ga0501047_0084282 3300049581 Bacteria 3055
94 Ga0501069_0000696 3300049585 Bacteria 15695
95 Ga0501070_0002432 3300049586 Bacteria 16330
96 Ga0501070_0004770 3300049586 Bacteria 11605
97 Ga0501070_0038607 3300049586 Bacteria 3984
98 Ga0501080_0010162 3300049742 Bacteria 8607
99 Ga0501080_0224469 3300049742 Bacteria 1718
100 Ga0501080_0282760 3300049742 Bacteria 1508
101 Ga0501035_0096388 3300049822 Bacteria 2599
102 Ga0501044_0004874 3300049823 Bacteria 14996
103 Ga0501044_0032703 3300049823 Bacteria 5467
104 Ga0501044_0440605 3300049823 Bacteria 1210
105 nmdc:mga06z11_9937_c1 3300050494 Bacteria 4032
106 nmdc:mga04h51_8058_c1 3300050495 Bacteria 2807
107 Ga0500568_0001499 3300053139 Bacteria 14914
108 Ga0466962_0002101 3300061719 Bacteria 9418
109 Ga0466962_0019383 3300061719 Bacteria 3269

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0239719 Ga0466967_0239719_285_1409 351
2 iso_pu_bacteria 2643221690 2644506240 351
3 iso_pu_bacteria 2643221694 2644526230 351
4 iso_pu_bacteria 2643221722 2644670905 351
5 3300046507 Ga0495606_0024242 Ga0495606_0024242_1390_2646 352
6 3300046512 Ga0495610_0022523 Ga0495610_0022523_2128_3384 352
7 3300046515 Ga0495620_0008485 Ga0495620_0008485_1732_2988 352
8 3300046533 Ga0495640_0010277 Ga0495640_0010277_38_1264 352
9 3300046538 Ga0495609_0017959 Ga0495609_0017959_998_2254 352
10 3300048091 Ga0495626_0008170 Ga0495626_0008170_319_1575 352
11 3300046524 Ga0495648_0036940 Ga0495648_0036940_905_2125 353
12 3300046810 Ga0495660_0059253 Ga0495660_0059253_668_1924 353
13 3300042533 Ga0450901_005367 Ga0450901_005367_22_1167 354
14 3300044658 Ga0466972_0013815 Ga0466972_0013815_1128_2273 354
15 3300044901 Ga0466960_0031920 Ga0466960_0031920_1092_2237 354
16 3300046459 Ga0495629_0004227 Ga0495629_0004227_3461_4612 354
17 3300047673 Ga0495593_0087461 Ga0495593_0087461_27_1178 354
18 3300014326 Ga0157380_10136191 Ga0157380_101361913 355
19 3300048914 Ga0496111_0026460 Ga0496111_0026460_798_1928 356
20 3300049569 Ga0501032_0012863 Ga0501032_0012863_4526_5683 356
21 3300049570 Ga0501033_0035755 Ga0501033_0035755_1350_2507 356
22 3300049571 Ga0501034_0008962 Ga0501034_0008962_4558_5715 356
23 3300049572 Ga0501036_0027411 Ga0501036_0027411_2673_3830 356
24 3300049573 Ga0501037_0170434 Ga0501037_0170434_55_1212 356
25 3300049574 Ga0501038_0027795 Ga0501038_0027795_933_2090 356
26 3300049575 Ga0501039_0189923 Ga0501039_0189923_319_1476 356
27 3300049585 Ga0501069_0000696 Ga0501069_0000696_6764_7903 356
28 3300049586 Ga0501070_0004770 Ga0501070_0004770_9951_11108 356
29 3300049586 Ga0501070_0038607 Ga0501070_0038607_2181_3320 356
30 3300049742 Ga0501080_0010162 Ga0501080_0010162_1010_2149 356
31 3300049823 Ga0501044_0440605 Ga0501044_0440605_15_1172 356
32 3300049569 Ga0501032_0024128 Ga0501032_0024128_699_1841 357
33 3300049573 Ga0501037_0135705 Ga0501037_0135705_285_1427 357
34 3300049581 Ga0501047_0084282 Ga0501047_0084282_207_1349 357
35 3300049586 Ga0501070_0002432 Ga0501070_0002432_8300_9442 357
36 3300049742 Ga0501080_0224469 Ga0501080_0224469_317_1459 357
37 3300049823 Ga0501044_0004874 Ga0501044_0004874_2763_3905 357
38 3300053139 Ga0500568_0001499 Ga0500568_0001499_8996_10153 358
39 3300031616 Ga0307508_10012862 Ga0307508_100128624 360
40 3300047447 Ga0495685_002168 Ga0495685_002168_3160_4353 360
41 iso_pu_bacteria 2802429296 2804847086 361
42 iso_pu_bacteria 3006425503 3006428674 361
43 iso_pu_bacteria 8025413630 8025414438 361
44 iso_pu_bacteria 2784746763 2785343350 364
45 iso_pu_bacteria 2808606375 2808920541 364
46 iso_pu_bacteria 2877676314 2877681145 364
47 3300005937 Ga0081455_10079523 Ga0081455_100795232 365
48 3300044765 Ga0466970_0025788 Ga0466970_0025788_293_1570 366
49 iso_pu_bacteria 2582581313 2585308756 366
50 iso_pu_bacteria 2643221647 2644262239 366
51 iso_pu_bacteria 2867428634 2867436204 366
52 iso_pu_bacteria 2954380949 2954386279 366
53 iso_pu_bacteria 2954691527 2954696957 366
54 iso_pu_bacteria 2954701450 2954705177 366
55 iso_pu_bacteria 2954711539 2954716284 366
56 iso_pu_bacteria 2954721474 2954726226 366
57 iso_pu_bacteria 2954731030 2954735584 366
58 iso_pu_bacteria 2954740390 2954745151 366
59 iso_pu_bacteria 2954749733 2954754440 366
60 iso_pu_bacteria 2954759201 2954764125 366
61 iso_pu_bacteria 3006493962 3006500737 366
62 iso_pu_bacteria 2643221548 2643764890 367
63 iso_pu_bacteria 2643221682 2644461270 367
64 3300011119 Ga0105246_10006981 Ga0105246_100069815 368
65 3300013105 Ga0157369_10083496 Ga0157369_100834962 368
66 3300025904 Ga0207647_10054029 Ga0207647_100540292 368
67 3300030500 Ga0268256_1013845 Ga0268256_10138451 368
68 3300030522 Ga0307512_10005510 Ga0307512_100055103 368
69 3300041404 Ga0439436_0001116 Ga0439436_0001116_3967_5175 368
70 3300042014 Ga0439457_000937 Ga0439457_000937_4825_6033 368
71 3300045976 Ga0466967_0065672 Ga0466967_0065672_1982_3187 368
72 3300049742 Ga0501080_0282760 Ga0501080_0282760_187_1392 368
73 3300049823 Ga0501044_0032703 Ga0501044_0032703_2380_3585 368
74 3300006042 Ga0075368_10003039 Ga0075368_100030392 369
75 3300006178 Ga0075367_10004307 Ga0075367_100043077 369
76 3300014497 Ga0182008_10001716 Ga0182008_100017165 369
77 3300027866 Ga0209813_10001682 Ga0209813_100016826 369
78 3300050494 nmdc:mga06z11_9937_c1 nmdc:mga06z11_9937_c1_2078_3286 369
79 3300050495 nmdc:mga04h51_8058_c1 nmdc:mga04h51_8058_c1_1039_2247 369
80 iso_pu_bacteria 2616644941 2616902095 369
81 iso_pu_bacteria 2784132148 2784588543 369
82 iso_pu_bacteria 2808606448 2809232154 369
83 iso_pu_bacteria 2811994879 2812358146 369
84 iso_pu_bacteria 2852635781 2852636714 369
85 iso_pu_bacteria 2862507626 2862513943 369
86 iso_pu_bacteria 2954682443 2954687267 369
87 iso_pu_bacteria 3006393351 3006397393 369
88 iso_pu_bacteria 8023623736 8023625971 369
89 iso_pu_bacteria 8056829672 8056831733 369
90 3300041512 Ga0451853_1060785 Ga0451853_1060785_3257_4471 370
91 3300042131 Ga0450894_000662 Ga0450894_000662_674_1888 370
92 3300042135 Ga0450899_000881 Ga0450899_000881_518_1732 370
93 3300042145 Ga0450906_001158 Ga0450906_001158_4202_5416 370
94 3300042184 Ga0450908_012416 Ga0450908_012416_184_1398 370
95 3300044656 Ga0466969_0024715 Ga0466969_0024715_1137_2342 370
96 3300044658 Ga0466972_0006805 Ga0466972_0006805_2036_3241 370
97 3300044684 Ga0466966_0004852 Ga0466966_0004852_2881_4086 370
98 3300044693 Ga0466961_0000287 Ga0466961_0000287_27275_28480 370
99 3300044694 Ga0466963_0001828 Ga0466963_0001828_10368_11573 370
100 3300044706 Ga0466964_0030816 Ga0466964_0030816_84_1289 370
101 3300044719 Ga0466971_0016513 Ga0466971_0016513_1812_3017 370
102 3300044842 Ga0466957_0005703 Ga0466957_0005703_5776_6981 370
103 3300045049 Ga0466959_0004411 Ga0466959_0004411_2881_4086 370
104 3300045836 Ga0466958_0003352 Ga0466958_0003352_873_2078 370
105 3300045976 Ga0466967_0004174 Ga0466967_0004174_4923_6128 370
106 3300061719 Ga0466962_0002101 Ga0466962_0002101_5333_6538 370
107 iso_pu_bacteria 2582581312 2585299378 370
108 iso_pu_bacteria 2862382967 2862385374 370
109 3300030522 Ga0307512_10057139 Ga0307512_100571392 371
110 3300031456 Ga0307513_10189986 Ga0307513_101899861 371
111 iso_pu_bacteria 2643221678 2644437128 371
112 iso_pu_bacteria 2643221714 2644628868 371
113 iso_pu_bacteria 2808606359 2808842024 371
114 iso_pu_bacteria 2919468124 2919469549 371
115 3300003578 Ga0006562J51391_1063331 Ga0006562J51391_10633311 372
116 3300003578 Ga0006562J51391_1063333 Ga0006562J51391_10633332 372
117 3300042138 Ga0450903_000759 Ga0450903_000759_4042_5247 372
118 3300042157 Ga0439458_0000007 Ga0439458_0000007_3824_5029 372
119 iso_pu_bacteria 2784746768 2785369463 372
120 3300003578 Ga0006562J51391_1146285 Ga0006562J51391_11462852 373
121 3300003578 Ga0006562J51391_1146286 Ga0006562J51391_11462866 373
122 3300005539 Ga0068853_100012504 Ga0068853_1000125045 373
123 3300015688 Ga0183367_1005 Ga0183367_1005286 373
124 3300028786 Ga0307517_10011791 Ga0307517_100117919 373
125 3300030521 Ga0307511_10004918 Ga0307511_100049188 373
126 3300031507 Ga0307509_10019167 Ga0307509_100191672 373
127 3300031649 Ga0307514_10004391 Ga0307514_1000439110 373
128 3300031649 Ga0307514_10107000 Ga0307514_101070002 373
129 3300031730 Ga0307516_10023651 Ga0307516_100236514 373
130 3300031838 Ga0307518_10009476 Ga0307518_100094768 373
131 3300033179 Ga0307507_10006857 Ga0307507_100068572 373
132 3300033180 Ga0307510_10058766 Ga0307510_100587663 373
133 3300042007 Ga0439449_0014347 Ga0439449_0014347_871_2076 373
134 3300042014 Ga0439457_004334 Ga0439457_004334_1802_3007 373
135 3300046459 Ga0495629_0004917 Ga0495629_0004917_5654_6883 373
136 3300046475 Ga0495639_0076408 Ga0495639_0076408_165_1394 373
137 3300049822 Ga0501035_0096388 Ga0501035_0096388_476_1693 373
138 iso_pu_bacteria 2582581314 2585313452 373
139 iso_pu_bacteria 2863404153 2863404647 373
140 iso_pu_bacteria 2946064051 2946067698 373
141 iso_pu_bacteria 8008558824 8008567344 373
142 3300044683 Ga0466965_0010858 Ga0466965_0010858_989_2188 374
143 3300044693 Ga0466961_0006252 Ga0466961_0006252_4212_5411 374
144 3300044719 Ga0466971_0026436 Ga0466971_0026436_1012_2211 374
145 3300044735 Ga0466968_0010917 Ga0466968_0010917_1283_2482 374
146 3300045049 Ga0466959_0083523 Ga0466959_0083523_983_2182 374
147 3300046689 Ga0495613_0006251 Ga0495613_0006251_6968_8161 374
148 3300047321 Ga0495676_0003128 Ga0495676_0003128_10613_11806 374
149 3300048089 Ga0495614_0002312 Ga0495614_0002312_6573_7766 374
150 3300061719 Ga0466962_0019383 Ga0466962_0019383_1165_2364 374
151 iso_pu_bacteria 2811994917 2812480549 375
152 3300003316 rootH1_10000615 rootH1_100006158 378
153 3300003320 rootH2_10029866 rootH2_100298668 378
154 3300003322 rootL2_10085905 rootL2_100859052 378
155 3300003323 rootH1_10052130 rootH1_100521301 378
156 iso_pu_bacteria 2990059506 2990068155 378

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01494

FAD_binding_3

FAD binding domain

70

113

0.91

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

75

122

0.91

PF00743

FMO-like

Flavin-binding monooxygenase-like

70

388

0.89

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

74

279

0.89

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

135

275

0.71

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

71

301

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sez-assembly1.cif.gz_A crystal structure of protoporphyrinogen ix oxidase 0.9528 23 54
4mif-assembly1.cif.gz_D pyranose 2-oxidase from phanerochaete chrysosporium, wild type from natural source 0.9359 23 54
4mig-assembly1.cif.gz_A pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9355 23 54
4mig-assembly1.cif.gz_B pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9323 23 54
5l3b-assembly1.cif.gz_A human lsd1/corest: lsd1 d556g mutation 0.9158 23 60
ID Description Score Start End Superfamily
2vq3B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9625 25 53 3.40.50.720
1yonA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9554 25 51 3.40.50.720
af_A0A1D6E7M3_47_537_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.944 25 60 3.50.50.60
af_Q5U1B0_1_189_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9389 23 55 3.40.50.720
af_Q687X5_19_201_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9318 23 53 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A848THH7-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9565 25 182 GO:0004497
GO:0005829
GO:0050660
AF-A0A7C5MST2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9483 23 216 GO:0004497
GO:0050660
AF-L8JHT3-F1-model_v4 Monooxygenase, putative 0.9405 23 147 GO:0004497
GO:0050660
AF-A0A2R7R062-F1-model_v4 Potassium transporter Trk 0.9352 23 159 GO:0004497
GO:0050660
AF-X8C942-F1-model_v4 deleted 0.9325 38 139

Feature Viewer

pLDDT pTM Quality
82.15 0.81 High
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Predicted Structure (AlphaFold2)

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