F225353

General Info

Members Datasets Scaffolds Average Seq Length
156 124 312 349

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0079781|Ga0395905_0079781_820_2118
Length 420
Sequence VRLELFDYELPPERIAQTPIEPRDASRLLVLHANGSREHRRFLELPSLLSAGDLLVFNDTRVLPARLFGRKETGANVEALLLQRQSAGRWLALVYPGRRLQEGARIHFGDGVLTAEVVGRGDEGTRVLQFEAPGIPDDQQGERTDELIHQLGQVPLPPYIHERLDDPERYQTIYAREEGSAAAPTAGLHFTPRVFDALRERGVGFAYVTLHVGIATFRPVKVDLIAEHAMHSEWYSVSPEAAKAINECTGRVVAVGTTTVRALESASGRWSDRVQGSGFRVQARARVQGPQDSEGAAGAGWSSGRWSVVGGQNAEPGSRRDDSPQSWGASEGEQGRRIEAGSGLTRLYVTPGYRFRVVDALLTNFHMPRSSLMILVSSLAGVEPIRAAYRDALAGGYRFLSFGDAMFIEAAPGTRAADPE

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
35 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
36 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
40 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
41 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
66 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
67 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
68 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
71 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
72 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
73 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
74 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
75 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
80 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
86 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
87 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
88 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
89 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
92 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
93 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
94 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
95 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
96 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
99 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
102 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
118 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
119 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
120 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
123 2734482264 Dyella sp. AD052 Isolate Unclassified
124 2738543009 Luteibacter sp. OK325 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.44
Metatranscriptomes 0.64
Isolates 1.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.13
Nodule 0
Rhizoplane 0.64
Rhizosphere 87.18
Stem 0
Stem Tuber 0
Unclassified 1.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0079781 3300037471 Bacteria 3068
2 JGI25162J39368_1001477 3300002737 Bacteria 12327
3 JGI25406J46586_10008270 3300003203 Bacteria 4722
4 Ga0065707_10084173 3300005295 Bacteria 7574
5 Ga0070676_10071968 3300005328 Bacteria 2078
6 Ga0070680_100012219 3300005336 Bacteria 6669
7 Ga0070682_100024521 3300005337 Bacteria 3591
8 Ga0070661_100039648 3300005344 Bacteria 3433
9 Ga0070668_100006622 3300005347 Bacteria 8584
10 Ga0070669_100023018 3300005353 Bacteria 4458
11 Ga0070669_100266702 3300005353 Bacteria 1368
12 Ga0070714_100108947 3300005435 Bacteria 2450
13 Ga0070700_100004355 3300005441 Bacteria 7391
14 Ga0070685_10117775 3300005466 Bacteria 1645
15 Ga0070706_100032117 3300005467 Bacteria 4842
16 Ga0070707_100135960 3300005468 Bacteria 2391
17 Ga0070698_100180727 3300005471 Bacteria 2048
18 Ga0070697_100355913 3300005536 Bacteria 1265
19 Ga0068853_100013686 3300005539 Bacteria 6628
20 Ga0070672_100008489 3300005543 Bacteria 7031
21 Ga0070695_100036657 3300005545 Bacteria 3086
22 Ga0070704_100011884 3300005549 Bacteria 5360
23 Ga0068861_100128782 3300005719 Bacteria 2052
24 Ga0081539_10051168 3300005985 Bacteria 2331
25 Ga0105240_10028145 3300009093 Bacteria 7347
26 Ga0105240_10195914 3300009093 Bacteria 2372
27 Ga0111539_10423973 3300009094 Bacteria 1550
28 Ga0105245_10077972 3300009098 Bacteria 3022
29 Ga0105243_10052946 3300009148 Bacteria 3217
30 Ga0105249_10000463 3300009553 Bacteria 37844
31 Ga0105249_10175932 3300009553 Bacteria 2079
32 Ga0105239_10008356 3300010375 Bacteria 11793
33 Ga0163162_10000452 3300013306 Bacteria 37968
34 Ga0157372_10395205 3300013307 Bacteria 1611
35 Ga0157375_10004983 3300013308 Bacteria 11549
36 Ga0157380_10001490 3300014326 Bacteria 15328
37 Ga0157380_10016169 3300014326 Bacteria 5498
38 Ga0157380_10254188 3300014326 Bacteria 1592
39 Ga0157377_10107743 3300014745 Bacteria 1671
40 Ga0182006_1000077 3300015261 Bacteria 127377
41 Ga0182005_1000060 3300015265 Bacteria 98664
42 Ga0213876_10044930 3300021384 Bacteria 2336
43 Ga0209148_1001491 3300025254 Bacteria 11681
44 Ga0209129_1003882 3300025258 Bacteria 6223
45 Ga0209233_1010565 3300025261 Bacteria 2760
46 Ga0207699_10008470 3300025906 Bacteria 5077
47 Ga0207645_10148006 3300025907 Bacteria 1532
48 Ga0207707_10276513 3300025912 Bacteria 1455
49 Ga0207695_10207257 3300025913 Bacteria 1873
50 Ga0207695_10240159 3300025913 Bacteria 1713
51 Ga0207660_10036056 3300025917 Bacteria 3437
52 Ga0207649_10229281 3300025920 Bacteria 1327
53 Ga0207681_10048104 3300025923 Bacteria 2877
54 Ga0207694_10084815 3300025924 Bacteria 2492
55 Ga0207650_10116283 3300025925 Bacteria 2077
56 Ga0207659_10091132 3300025926 Bacteria 2277
57 Ga0207664_10325043 3300025929 Bacteria 1358
58 Ga0207709_10230651 3300025935 Bacteria 1341
59 Ga0207691_10016337 3300025940 Bacteria 7047
60 Ga0207667_10454916 3300025949 Bacteria 1301
61 Ga0207712_10000128 3300025961 Bacteria 79324
62 Ga0207668_10009605 3300025972 Bacteria 5807
63 Ga0207641_10162153 3300026088 Bacteria 2033
64 Ga0207648_10096577 3300026089 Bacteria 2586
65 Ga0265334_10022434 3300028573 Bacteria 2572
66 Ga0265338_10010715 3300028800 Bacteria 10703
67 Ga0265320_10003980 3300031240 Bacteria 9750
68 Ga0265340_10004501 3300031247 Bacteria 7778
69 Ga0265331_10022886 3300031250 Bacteria 3183
70 Ga0307513_10008550 3300031456 Bacteria 13086
71 Ga0307509_10021299 3300031507 Bacteria 7332
72 Ga0316575_10004039 3300031665 Bacteria 5139
73 Ga0316575_10038679 3300031665 Bacteria 1882
74 Ga0316579_10009346 3300031691 Bacteria 4119
75 Ga0316579_10066895 3300031691 Bacteria 1697
76 Ga0316576_10101797 3300031727 Bacteria 2147
77 Ga0316577_10007267 3300031733 Bacteria 5905
78 Ga0316583_10022918 3300032133 Bacteria 2233
79 Ga0316585_10035881 3300032137 Bacteria 1571
80 Ga0316580_10002345 3300032139 Bacteria 5192
81 Ga0316592_1008295 3300033524 Bacteria 2047
82 Ga0316582_0002588 3300036647 Bacteria 8576
83 Ga0316584_0025192 3300036712 Bacteria 4360
84 Ga0316584_0085987 3300036712 Bacteria 2354
85 Ga0395898_0003593 3300037466 Bacteria 17288
86 Ga0395898_0015523 3300037466 Bacteria 7810
87 Ga0316581_0056164 3300037588 Unclassified 1207
88 Ga0436365_1129726 3300039437 Bacteria 2017
89 Ga0451795_0253701 3300041456 Bacteria 1340
90 Ga0439464_0014574 3300042439 Bacteria 2115
91 Ga0451577_0001783 3300042876 Bacteria 27612
92 Ga0451577_0045460 3300042876 Bacteria 3930
93 Ga0451577_0272258 3300042876 Bacteria 1534
94 Ga0453683_0048742 3300044673 Bacteria 2657
95 Ga0453683_0184132 3300044673 Bacteria 1325
96 Ga0453684_0001112 3300044712 Bacteria 84448
97 Ga0453684_0020965 3300044712 Bacteria 9802
98 Ga0453684_0031180 3300044712 Bacteria 7500
99 Ga0453684_0096675 3300044712 Bacteria 3627
100 Ga0453684_0179389 3300044712 Bacteria 2487
101 Ga0453684_0209226 3300044712 Bacteria 2268
102 Ga0453684_0211007 3300044712 Bacteria 2257
103 Ga0453684_0317519 3300044712 Bacteria 1765
104 Ga0451576_0098555 3300045051 Bacteria 3040
105 Ga0451576_0136378 3300045051 Unclassified 2559
106 Ga0451576_0178819 3300045051 Bacteria 2215
107 Ga0451576_0278166 3300045051 Bacteria 1750
108 Ga0495617_000337 3300046452 Bacteria 25904
109 Ga0495650_0004021 3300046471 Bacteria 10318
110 Ga0495584_0006111 3300046491 Bacteria 6332
111 Ga0495585_0000927 3300046492 Bacteria 24791
112 Ga0495607_0000151 3300046501 Bacteria 72430
113 Ga0495606_0000872 3300046507 Bacteria 45088
114 Ga0495610_0001649 3300046512 Bacteria 19631
115 Ga0495610_0026956 3300046512 Bacteria 3061
116 Ga0495616_0000098 3300046513 Bacteria 74007
117 Ga0495616_0005388 3300046513 Bacteria 7882
118 Ga0495620_0000583 3300046515 Bacteria 22842
119 Ga0495631_0000262 3300046518 Bacteria 36730
120 Ga0495632_0046223 3300046519 Bacteria 2164
121 Ga0495648_0032723 3300046524 Bacteria 3407
122 Ga0495668_0009805 3300046616 Bacteria 5845
123 Ga0495611_0000092 3300046648 Bacteria 62897
124 Ga0495625_0120986 3300046660 Bacteria 1781
125 Ga0495670_0041041 3300046691 Bacteria 2308
126 Ga0495660_0000076 3300046810 Bacteria 105580
127 Ga0495673_0000010 3300047469 Bacteria 709599
128 Ga0495673_0000087 3300047469 Bacteria 190669
129 Ga0495673_0056029 3300047469 Bacteria 1707
130 Ga0495686_0064221 3300047472 Bacteria 2273
131 Ga0496121_0001673 3300048924 Bacteria 36526
132 Ga0496121_0008032 3300048924 Bacteria 12579
133 Ga0496121_0019184 3300048924 Bacteria 6852
134 Ga0496124_0107014 3300048927 Bacteria 2257
135 Ga0501033_0055313 3300049570 Bacteria 2934
136 Ga0501037_0010336 3300049573 Bacteria 6848
137 Ga0501040_0000546 3300049576 Bacteria 22767
138 Ga0501042_0015748 3300049578 Bacteria 5182
139 Ga0501071_0120458 3300049587 Bacteria 1945
140 Ga0501074_0054925 3300049590 Bacteria 2871
141 Ga0501075_0047091 3300049591 Bacteria 3240
142 Ga0501075_0163376 3300049591 Bacteria 1699
143 Ga0501076_0027538 3300049592 Bacteria 4407
144 Ga0501076_0086494 3300049592 Bacteria 2520
145 Ga0501257_011690 3300049686 Bacteria 2006
146 Ga0501080_0102196 3300049742 Bacteria 2659
147 Ga0501080_0353803 3300049742 Bacteria 1326
148 nmdc:mga08y16_304714_c1 3300050511 Bacteria 1641
149 Ga0500555_006790 3300053103 Bacteria 3253
150 Ga0500628_015789 3300053129 Bacteria 1450
151 Ga0500568_0001834 3300053139 Bacteria 13095
152 Ga0500588_0004250 3300053146 Bacteria 3088
153 Ga0501084_0118079 3300054114 Bacteria 2230
154 2687235357 2684623219 Bacteria 8442773
155 2735836069 2734482264 Unclassified 5014763
156 2739227754 2738543009 Bacteria 4944499
157 Ga0395905_0079781
158 JGI25162J39368_1001477
159 JGI25406J46586_10008270
160 Ga0065707_10084173
161 Ga0070676_10071968
162 Ga0070680_100012219
163 Ga0070682_100024521
164 Ga0070661_100039648
165 Ga0070668_100006622
166 Ga0070669_100023018
167 Ga0070669_100266702
168 Ga0070714_100108947
169 Ga0070700_100004355
170 Ga0070685_10117775
171 Ga0070706_100032117
172 Ga0070707_100135960
173 Ga0070698_100180727
174 Ga0070697_100355913
175 Ga0068853_100013686
176 Ga0070672_100008489
177 Ga0070695_100036657
178 Ga0070704_100011884
179 Ga0068861_100128782
180 Ga0081539_10051168
181 Ga0105240_10028145
182 Ga0105240_10195914
183 Ga0111539_10423973
184 Ga0105245_10077972
185 Ga0105243_10052946
186 Ga0105249_10000463
187 Ga0105249_10175932
188 Ga0105239_10008356
189 Ga0163162_10000452
190 Ga0157372_10395205
191 Ga0157375_10004983
192 Ga0157380_10001490
193 Ga0157380_10016169
194 Ga0157380_10254188
195 Ga0157377_10107743
196 Ga0182006_1000077
197 Ga0182005_1000060
198 Ga0213876_10044930
199 Ga0209148_1001491
200 Ga0209129_1003882
201 Ga0209233_1010565
202 Ga0207699_10008470
203 Ga0207645_10148006
204 Ga0207707_10276513
205 Ga0207695_10207257
206 Ga0207695_10240159
207 Ga0207660_10036056
208 Ga0207649_10229281
209 Ga0207681_10048104
210 Ga0207694_10084815
211 Ga0207650_10116283
212 Ga0207659_10091132
213 Ga0207664_10325043
214 Ga0207709_10230651
215 Ga0207691_10016337
216 Ga0207667_10454916
217 Ga0207712_10000128
218 Ga0207668_10009605
219 Ga0207641_10162153
220 Ga0207648_10096577
221 Ga0265334_10022434
222 Ga0265338_10010715
223 Ga0265320_10003980
224 Ga0265340_10004501
225 Ga0265331_10022886
226 Ga0307513_10008550
227 Ga0307509_10021299
228 Ga0316575_10004039
229 Ga0316575_10038679
230 Ga0316579_10009346
231 Ga0316579_10066895
232 Ga0316576_10101797
233 Ga0316577_10007267
234 Ga0316583_10022918
235 Ga0316585_10035881
236 Ga0316580_10002345
237 Ga0316592_1008295
238 Ga0316582_0002588
239 Ga0316584_0025192
240 Ga0316584_0085987
241 Ga0395898_0003593
242 Ga0395898_0015523
243 Ga0316581_0056164
244 Ga0436365_1129726
245 Ga0451795_0253701
246 Ga0439464_0014574
247 Ga0451577_0001783
248 Ga0451577_0045460
249 Ga0451577_0272258
250 Ga0453683_0048742
251 Ga0453683_0184132
252 Ga0453684_0001112
253 Ga0453684_0020965
254 Ga0453684_0031180
255 Ga0453684_0096675
256 Ga0453684_0179389
257 Ga0453684_0209226
258 Ga0453684_0211007
259 Ga0453684_0317519
260 Ga0451576_0098555
261 Ga0451576_0136378
262 Ga0451576_0178819
263 Ga0451576_0278166
264 Ga0495617_000337
265 Ga0495650_0004021
266 Ga0495584_0006111
267 Ga0495585_0000927
268 Ga0495607_0000151
269 Ga0495606_0000872
270 Ga0495610_0001649
271 Ga0495610_0026956
272 Ga0495616_0000098
273 Ga0495616_0005388
274 Ga0495620_0000583
275 Ga0495631_0000262
276 Ga0495632_0046223
277 Ga0495648_0032723
278 Ga0495668_0009805
279 Ga0495611_0000092
280 Ga0495625_0120986
281 Ga0495670_0041041
282 Ga0495660_0000076
283 Ga0495673_0000010
284 Ga0495673_0000087
285 Ga0495673_0056029
286 Ga0495686_0064221
287 Ga0496121_0001673
288 Ga0496121_0008032
289 Ga0496121_0019184
290 Ga0496124_0107014
291 Ga0501033_0055313
292 Ga0501037_0010336
293 Ga0501040_0000546
294 Ga0501042_0015748
295 Ga0501071_0120458
296 Ga0501074_0054925
297 Ga0501075_0047091
298 Ga0501075_0163376
299 Ga0501076_0027538
300 Ga0501076_0086494
301 Ga0501257_011690
302 Ga0501080_0102196
303 Ga0501080_0353803
304 nmdc:mga08y16_304714_c1
305 Ga0500555_006790
306 Ga0500628_015789
307 Ga0500568_0001834
308 Ga0500588_0004250
309 Ga0501084_0118079
310 2687235357
311 2735836069
312 2739227754

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02547

Queuosine_synth

Queuosine biosynthesis protein

3

288

0.94

PF02547

Queuosine_synth

Queuosine biosynthesis protein

327

408

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ik2-assembly1.cif.gz_C caldalaklibacillus thermarum f1-atpase (epsilon mutant) 0.7669 108 162
4xd7-assembly1.cif.gz_C structure of thermophilic f1-atpase inhibited by epsilon subunit 0.744 108 163
5hkk-assembly1.cif.gz_A caldalaklibacillus thermarum f1-atpase (wild type) 0.7437 112 162
7l1r-assembly1.cif.gz_C ps3 f1-atpase hydrolysis dwell 0.7428 112 163
6q45-assembly2.cif.gz_J f1-atpase from fusobacterium nucleatum 0.7386 112 159
ID Description Score Start End Superfamily
af_P0A7F9_64_163_3.40.1780.10 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.9728 94 189 3.40.1780.10
1vkyA01 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.956 34 369 3.40.1780.10
1vkyA01 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.9514 34 369 3.40.1780.10
af_P0A7F9_64_163_3.40.1780.10 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.9255 94 189 3.40.1780.10
1vkyA02 Mainly Beta;Beta Barrel;Thrombin, subunit H;QueA-like 0.8661 94 173 2.40.10.240
ID Description Score Start End GO Terms
AF-T1BWX1-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.9904 253 362 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A238TF02-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9874 31 369 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A661EH08-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9871 31 369 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A381UFG1-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.9867 31 370 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A378AU24-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9861 31 369 GO:0002099
GO:0005737
GO:0008616
GO:0051075

Map