F224500

General Info

Members Datasets Scaffolds Average Seq Length
156 112 312 259

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10111660|Ga0075365_101116602
Length 268
Sequence MLRRHFLSALPLLPAFAQGQGQNAAAGGDTAPSVYEWRQYSLRNGAGARRLDDYLQNALVPALNRIGHAPIGVFQVTFGLPSPTFFVLTPSTASGGADSLLARESKLDGDEAYLKAAAPYLDAVAADPIYVRQEITLLSAFPQFPRISVPAATASKGPRMFELRTYESHNERAHRAKVKMFAEMGEIDIFKRVGLTPVFFGRTVAGARMPSLIYMLVHENMAAREKNWGAFVSDPEWRKLAQTPGFSDPDIVSNITTVFLRPTGYSQI

Samples

Sample ID Description Type Environment
1 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
37 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
55 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
65 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
66 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
69 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
72 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
75 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
90 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
91 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
94 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
95 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
96 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
97 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
98 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
99 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
100 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
105 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
106 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
109 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
110 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
111 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.38
Nodule 0
Rhizoplane 5.13
Rhizosphere 78.85
Stem 0
Stem Tuber 0
Unclassified 22.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075365_10111660 3300006038 Unclassified 1879
2 rootL2_10262598 3300003322 Bacteria 2317
3 Ga0065715_10150194 3300005293 Unclassified 1738
4 Ga0065707_10129345 3300005295 Unclassified 1949
5 Ga0070658_10290115 3300005327 Bacteria 1394
6 Ga0070670_100006288 3300005331 Bacteria 10057
7 Ga0070668_100141793 3300005347 Unclassified 1937
8 Ga0070669_100013787 3300005353 Bacteria 5745
9 Ga0070675_100072072 3300005354 Bacteria 2868
10 Ga0070675_100074317 3300005354 Bacteria 2823
11 Ga0070675_100376359 3300005354 Unclassified 1263
12 Ga0070673_100706852 3300005364 Bacteria 926
13 Ga0070659_100147831 3300005366 Bacteria 1915
14 Ga0070684_100116907 3300005535 Bacteria 2396
15 Ga0070672_100127812 3300005543 Unclassified 2086
16 Ga0068855_100592640 3300005563 Bacteria 1196
17 Ga0070664_100143342 3300005564 Bacteria 2105
18 Ga0070702_100246712 3300005615 Unclassified 1208
19 Ga0068866_10074155 3300005718 Bacteria 1808
20 Ga0068862_100026402 3300005844 Bacteria 4881
21 Ga0075368_10007154 3300006042 Bacteria 3931
22 Ga0075364_10010576 3300006051 Bacteria 5580
23 Ga0075364_10012259 3300006051 Bacteria 5241
24 Ga0075364_10057965 3300006051 Bacteria 2537
25 Ga0075367_10003423 3300006178 Bacteria 7562
26 Ga0075367_10076714 3300006178 Bacteria 2017
27 Ga0075366_10001004 3300006195 Bacteria 13780
28 Ga0075366_10001957 3300006195 Bacteria 10419
29 Ga0075366_10007610 3300006195 Bacteria 5993
30 Ga0075370_10302412 3300006353 Unclassified 951
31 Ga0075430_100009935 3300006846 Bacteria 8048
32 Ga0075430_100018860 3300006846 Bacteria 5869
33 Ga0075430_100354809 3300006846 Bacteria 1211
34 Ga0075431_100004563 3300006847 Bacteria 13600
35 Ga0075431_100014454 3300006847 Bacteria 7986
36 Ga0075433_10250335 3300006852 Bacteria 1572
37 Ga0075429_100084148 3300006880 Unclassified 2773
38 Ga0075429_100411095 3300006880 Bacteria 1185
39 Ga0068865_100125606 3300006881 Bacteria 1914
40 Ga0111539_10027080 3300009094 Bacteria 7002
41 Ga0111539_10085142 3300009094 Bacteria 3716
42 Ga0111539_10188837 3300009094 Bacteria 2405
43 Ga0111539_10201311 3300009094 Bacteria 2322
44 Ga0114129_10000143 3300009147 Bacteria 75185
45 Ga0114129_10005030 3300009147 Bacteria 18607
46 Ga0114129_10019998 3300009147 Bacteria 9529
47 Ga0114129_10201188 3300009147 Bacteria 2698
48 Ga0105249_10017133 3300009553 Bacteria 6431
49 Ga0105249_10323750 3300009553 Bacteria 1553
50 Ga0157371_10270377 3300013102 Bacteria 1226
51 Ga0157372_10129200 3300013307 Bacteria 2906
52 Ga0163163_10777891 3300014325 Bacteria 1021
53 Ga0157380_10041698 3300014326 Bacteria 3584
54 Ga0157380_10257443 3300014326 Bacteria 1583
55 Ga0157377_10076465 3300014745 Unclassified 1947
56 Ga0157377_10316870 3300014745 Bacteria 1035
57 Ga0207697_10010861 3300025315 Bacteria 3874
58 Ga0207688_10044648 3300025901 Unclassified 2470
59 Ga0207681_10041016 3300025923 Bacteria 3083
60 Ga0207650_10017070 3300025925 Bacteria 5081
61 Ga0207659_10037113 3300025926 Bacteria 3381
62 Ga0207690_10236943 3300025932 Bacteria 1404
63 Ga0207690_10529992 3300025932 Bacteria 955
64 Ga0207706_10309776 3300025933 Bacteria 1375
65 Ga0207691_10088054 3300025940 Bacteria 2785
66 Ga0207691_10228417 3300025940 Unclassified 1612
67 Ga0207667_10627832 3300025949 Bacteria 1082
68 Ga0207712_10012028 3300025961 Bacteria 5524
69 Ga0207668_10249367 3300025972 Bacteria 1441
70 Ga0207678_10243457 3300026067 Bacteria 1540
71 Ga0207641_10416389 3300026088 Bacteria 1293
72 Ga0207674_10011212 3300026116 Bacteria 10076
73 Ga0207683_10140611 3300026121 Bacteria 2175
74 Ga0207698_10622874 3300026142 Unclassified 1066
75 Ga0209983_1018518 3300027665 Bacteria 1446
76 Ga0209813_10081505 3300027866 Unclassified 1071
77 Ga0207428_10027859 3300027907 Bacteria 4700
78 Ga0268265_10062799 3300028380 Bacteria 2855
79 Ga0307408_100147356 3300031548 Unclassified 1855
80 Ga0307405_10185583 3300031731 Bacteria 1497
81 Ga0307405_10437235 3300031731 Unclassified 1034
82 Ga0307413_10114598 3300031824 Bacteria 1812
83 Ga0307412_10253885 3300031911 Unclassified 1367
84 Ga0307416_100983154 3300032002 Bacteria 947
85 Ga0307414_10227111 3300032004 Unclassified 1537
86 Ga0307411_10113303 3300032005 Bacteria 1946
87 Ga0373955_0105861 3300035172 Bacteria 1621
88 Ga0439446_0085760 3300042156 Bacteria 980
89 Ga0439435_0042607 3300042436 Bacteria 1275
90 Ga0495653_0264060 3300046463 Bacteria 1137
91 Ga0495667_0070186 3300046559 Bacteria 2286
92 Ga0495625_0092169 3300046660 Bacteria 2094
93 Ga0495674_0085088 3300047319 Bacteria 2709
94 Ga0495672_0055552 3300047320 Bacteria 2310
95 Ga0496102_0328224 3300048905 Bacteria 1441
96 Ga0496105_0463075 3300048908 Unclassified 999
97 Ga0496106_0136968 3300048909 Bacteria 1924
98 Ga0496107_0082471 3300048910 Bacteria 2345
99 Ga0496109_0275850 3300048912 Bacteria 1584
100 Ga0496110_0018934 3300048913 Bacteria 5785
101 Ga0496111_0098165 3300048914 Bacteria 2151
102 Ga0496113_0060766 3300048916 Bacteria 2850
103 Ga0501034_0220081 3300049571 Bacteria 1851
104 Ga0501036_0365619 3300049572 Unclassified 1204
105 Ga0501038_0121272 3300049574 Bacteria 2156
106 Ga0501039_0320696 3300049575 Viruses 1218
107 Ga0501042_0315766 3300049578 Unclassified 1129
108 Ga0501071_0047637 3300049587 Bacteria 3080
109 Ga0501071_0081580 3300049587 Bacteria 2367
110 Ga0501071_0194036 3300049587 Bacteria 1524
111 Ga0501071_0280964 3300049587 Unclassified 1260
112 Ga0501072_0027129 3300049588 Bacteria 4469
113 Ga0501073_0049217 3300049589 Bacteria 2956
114 Ga0501074_0093859 3300049590 Unclassified 2149
115 Ga0501075_0341970 3300049591 Bacteria 1140
116 Ga0501075_0671908 3300049591 Bacteria 789
117 Ga0501077_0056946 3300049593 Bacteria 2482
118 Ga0501079_0146461 3300049741 Unclassified 1840
119 Ga0501079_0246188 3300049741 Bacteria 1397
120 Ga0501080_0057032 3300049742 Bacteria 3637
121 Ga0501081_0053206 3300049743 Unclassified 2795
122 Ga0501045_0135209 3300049824 Bacteria 1833
123 nmdc:mga03683_40218_c1 3300050489 Unclassified 1917
124 nmdc:mga00v17_21186_c1 3300050491 Bacteria 3735
125 nmdc:mga00v17_78090_c1 3300050491 Bacteria 2062
126 nmdc:mga00v17_9272_c1 3300050491 Bacteria 5321
127 nmdc:mga0yw44_251156_c1 3300050492 Bacteria 1177
128 nmdc:mga0k408_19429_c1 3300050493 Bacteria 3798
129 nmdc:mga0k408_75018_c1 3300050493 Bacteria 1976
130 nmdc:mga06z11_13291_c1 3300050494 Bacteria 3610
131 nmdc:mga06z11_24760_c1 3300050494 Unclassified 2836
132 nmdc:mga06z11_34170_c1 3300050494 Bacteria 2494
133 nmdc:mga04h51_58910_c1 3300050495 Bacteria 1311
134 nmdc:mga05p37_12499_c1 3300050507 Bacteria 10135
135 nmdc:mga05p37_1570_c1 3300050507 Bacteria 26535
136 nmdc:mga05p37_221003_c1 3300050507 Bacteria 2286
137 nmdc:mga05p37_413416_c1 3300050507 Unclassified 1572
138 nmdc:mga06r32_153686_c1 3300050510 Bacteria 2281
139 nmdc:mga06r32_164335_c1 3300050510 Bacteria 2203
140 nmdc:mga06r32_207140_c1 3300050510 Unclassified 1949
141 nmdc:mga06r32_416213_c1 3300050510 Bacteria 1325
142 nmdc:mga06r32_553197_c1 3300050510 Bacteria 1124
143 nmdc:mga08y16_32555_c1 3300050511 Bacteria 5479
144 nmdc:mga08y16_363726_c1 3300050511 Unclassified 1485
145 nmdc:mga08y16_477471_c1 3300050511 Unclassified 1269
146 nmdc:mga0a205_266962_c1 3300050515 Bacteria 1589
147 Ga0495595_0098719 3300053084 Bacteria 1408
148 Ga0500641_0001064 3300053096 Bacteria 9780
149 Ga0501084_0631750 3300054114 Bacteria 904
150 Ga0590071_004373 3300059421 Unclassified 3436
151 Ga0590071_007198 3300059421 Unclassified 2635
152 Ga0590074_000996 3300059423 Bacteria 4451
153 Ga0590075_000184 3300059424 Bacteria 17420
154 Ga0590077_001162 3300059426 Bacteria 6404
155 Ga0501082_0298450 3300060353 Unclassified 1403
156 Ga0501082_0382148 3300060353 Unclassified 1229
157 Ga0075365_10111660
158 rootL2_10262598
159 Ga0065715_10150194
160 Ga0065707_10129345
161 Ga0070658_10290115
162 Ga0070670_100006288
163 Ga0070668_100141793
164 Ga0070669_100013787
165 Ga0070675_100072072
166 Ga0070675_100074317
167 Ga0070675_100376359
168 Ga0070673_100706852
169 Ga0070659_100147831
170 Ga0070684_100116907
171 Ga0070672_100127812
172 Ga0068855_100592640
173 Ga0070664_100143342
174 Ga0070702_100246712
175 Ga0068866_10074155
176 Ga0068862_100026402
177 Ga0075368_10007154
178 Ga0075364_10010576
179 Ga0075364_10012259
180 Ga0075364_10057965
181 Ga0075367_10003423
182 Ga0075367_10076714
183 Ga0075366_10001004
184 Ga0075366_10001957
185 Ga0075366_10007610
186 Ga0075370_10302412
187 Ga0075430_100009935
188 Ga0075430_100018860
189 Ga0075430_100354809
190 Ga0075431_100004563
191 Ga0075431_100014454
192 Ga0075433_10250335
193 Ga0075429_100084148
194 Ga0075429_100411095
195 Ga0068865_100125606
196 Ga0111539_10027080
197 Ga0111539_10085142
198 Ga0111539_10188837
199 Ga0111539_10201311
200 Ga0114129_10000143
201 Ga0114129_10005030
202 Ga0114129_10019998
203 Ga0114129_10201188
204 Ga0105249_10017133
205 Ga0105249_10323750
206 Ga0157371_10270377
207 Ga0157372_10129200
208 Ga0163163_10777891
209 Ga0157380_10041698
210 Ga0157380_10257443
211 Ga0157377_10076465
212 Ga0157377_10316870
213 Ga0207697_10010861
214 Ga0207688_10044648
215 Ga0207681_10041016
216 Ga0207650_10017070
217 Ga0207659_10037113
218 Ga0207690_10236943
219 Ga0207690_10529992
220 Ga0207706_10309776
221 Ga0207691_10088054
222 Ga0207691_10228417
223 Ga0207667_10627832
224 Ga0207712_10012028
225 Ga0207668_10249367
226 Ga0207678_10243457
227 Ga0207641_10416389
228 Ga0207674_10011212
229 Ga0207683_10140611
230 Ga0207698_10622874
231 Ga0209983_1018518
232 Ga0209813_10081505
233 Ga0207428_10027859
234 Ga0268265_10062799
235 Ga0307408_100147356
236 Ga0307405_10185583
237 Ga0307405_10437235
238 Ga0307413_10114598
239 Ga0307412_10253885
240 Ga0307416_100983154
241 Ga0307414_10227111
242 Ga0307411_10113303
243 Ga0373955_0105861
244 Ga0439446_0085760
245 Ga0439435_0042607
246 Ga0495653_0264060
247 Ga0495667_0070186
248 Ga0495625_0092169
249 Ga0495674_0085088
250 Ga0495672_0055552
251 Ga0496102_0328224
252 Ga0496105_0463075
253 Ga0496106_0136968
254 Ga0496107_0082471
255 Ga0496109_0275850
256 Ga0496110_0018934
257 Ga0496111_0098165
258 Ga0496113_0060766
259 Ga0501034_0220081
260 Ga0501036_0365619
261 Ga0501038_0121272
262 Ga0501039_0320696
263 Ga0501042_0315766
264 Ga0501071_0047637
265 Ga0501071_0081580
266 Ga0501071_0194036
267 Ga0501071_0280964
268 Ga0501072_0027129
269 Ga0501073_0049217
270 Ga0501074_0093859
271 Ga0501075_0341970
272 Ga0501075_0671908
273 Ga0501077_0056946
274 Ga0501079_0146461
275 Ga0501079_0246188
276 Ga0501080_0057032
277 Ga0501081_0053206
278 Ga0501045_0135209
279 nmdc:mga03683_40218_c1
280 nmdc:mga00v17_21186_c1
281 nmdc:mga00v17_78090_c1
282 nmdc:mga00v17_9272_c1
283 nmdc:mga0yw44_251156_c1
284 nmdc:mga0k408_19429_c1
285 nmdc:mga0k408_75018_c1
286 nmdc:mga06z11_13291_c1
287 nmdc:mga06z11_24760_c1
288 nmdc:mga06z11_34170_c1
289 nmdc:mga04h51_58910_c1
290 nmdc:mga05p37_12499_c1
291 nmdc:mga05p37_1570_c1
292 nmdc:mga05p37_221003_c1
293 nmdc:mga05p37_413416_c1
294 nmdc:mga06r32_153686_c1
295 nmdc:mga06r32_164335_c1
296 nmdc:mga06r32_207140_c1
297 nmdc:mga06r32_416213_c1
298 nmdc:mga06r32_553197_c1
299 nmdc:mga08y16_32555_c1
300 nmdc:mga08y16_363726_c1
301 nmdc:mga08y16_477471_c1
302 nmdc:mga0a205_266962_c1
303 Ga0495595_0098719
304 Ga0500641_0001064
305 Ga0501084_0631750
306 Ga0590071_004373
307 Ga0590071_007198
308 Ga0590074_000996
309 Ga0590075_000184
310 Ga0590077_001162
311 Ga0501082_0298450
312 Ga0501082_0382148

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07978

NIPSNAP

NIPSNAP

161

267

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vqy-assembly1.cif.gz_C crystal structure of a nipsnap family protein (atu5224) from agrobacterium tumefaciens str. c58 at 2.40 a resolution 0.9088 205 312
5k9f-assembly1.cif.gz_A crystal structure of a nipsnap domain protein from burkholderia xenovorans 0.888 206 314
5ixu-assembly1.cif.gz_A crystal structure of an uncharacterized nipsnap domain protein from burkholderia xenovorans 0.8747 206 310
5k9f-assembly1.cif.gz_A crystal structure of a nipsnap domain protein from burkholderia xenovorans 0.8724 206 314
1vqy-assembly1.cif.gz_C crystal structure of a nipsnap family protein (atu5224) from agrobacterium tumefaciens str. c58 at 2.40 a resolution 0.8688 205 312
ID Description Score Start End Superfamily
5k9fA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.888 206 314 3.30.70.100
5ixuA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8747 206 310 3.30.70.100
5k9fA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8723 206 314 3.30.70.100
af_F6NVH9_176_279_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8558 203 312 3.30.70.100
5kakE00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8408 205 312 3.30.70.100
ID Description Score Start End GO Terms
AF-A0A4Q5RA46-F1-model_v4 NIPSNAP family containing protein 0.9878 143 314
AF-A0A1M7N2J9-F1-model_v4 NIPSNAP protein 0.9755 101 314
AF-A0A832MIV3-F1-model_v4 NIPSNAP family containing protein 0.9736 143 314
AF-A0A2V9IPG1-F1-model_v4 NIPSNAP family containing protein 0.9719 190 314
AF-A0A1H6C719-F1-model_v4 NIPSNAP protein 0.9702 85 314

Map