F223552

General Info

Members Datasets Scaffolds Average Seq Length
155 109 310 601

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2894510363|2894514342
Length 645
Sequence DHIRTSLGRRSGRFKPRLRDRAIYLRHILKFAEESVNILGISAFYHDSAACVIVDGQIIAAAQEERFTRKKHDAAFPKNAIEYCLNAAGKNLDQIEYVVFYDKPFLKFERLLETYIAFAPRGFQSFLTAMPIWLKEKLFQKLLLRDELKNLGADSNIESRLLFAEHHQSHAASAFFASPYEEAVVLTMDGVGEWTTTSVAIGCGNRLEAVKEIHFPHSIGLLYSAFTYYLGFKVNSGEYKVMGLAPYGETKYVDVILSKLLDLKADGSFRLDMQYFDYCTGLKMTNKKFDALFGDPPRKPEQPLTQKHMDIAASIQWVTEEIVLRLTRALFNETGRKNLCLAGGVALNCVANGRILRDGKFENIWIQPAAGDAGGAVGAALAAYYTHCDKPRRTNGKDAMSGTYLGPSYNNGEIEQQLSSAGARFERLSDADLITATVDALVAGKAVGWFQGRMEFGPRALGARSILGDPRNPAMQKTLNLKVKYRESFRPFAPAILREDMAEWFELDCDSPYMLFVANVAKDKRTEVTEQESALFGIDKLNIPRSEIPAVTHVDYSARIQSVDRETNPRFHELLSAFKARTGCPVLINTSFNIRGEPIVCSPKDAFRCFMGSEIELLVIENYILYKEKQDNRLKTNYSTTLEPD

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
55 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
56 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
63 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
67 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
70 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
77 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
89 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
92 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
97 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
98 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
99 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
100 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
101 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
106 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
107 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
108 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
109 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.58
Nodule 1.94
Rhizoplane 9.68
Rhizosphere 80.65
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10006523 3300005327 Bacteria 9466
2 Ga0070660_100003085 3300005339 Bacteria 11452
3 Ga0070709_10006704 3300005434 Bacteria 6286
4 Ga0070714_100005595 3300005435 Bacteria 9604
5 Ga0070714_100009176 3300005435 Bacteria 7764
6 Ga0070710_10000601 3300005437 Bacteria 17146
7 Ga0070705_100000729 3300005440 Bacteria 18726
8 Ga0070705_100021825 3300005440 Bacteria 3411
9 Ga0070694_100009408 3300005444 Bacteria 5997
10 Ga0070708_100009626 3300005445 Bacteria 7793
11 Ga0070685_10024630 3300005466 Bacteria 3307
12 Ga0070706_100001844 3300005467 Bacteria 21942
13 Ga0070706_100008112 3300005467 Bacteria 9793
14 Ga0070697_100000875 3300005536 Bacteria 22651
15 Ga0070697_100062109 3300005536 Bacteria 3048
16 Ga0070672_100081194 3300005543 Bacteria 2599
17 Ga0070693_100002958 3300005547 Bacteria 7861
18 Ga0068855_100112859 3300005563 Bacteria 3119
19 Ga0068852_100001626 3300005616 Bacteria 15326
20 Ga0068863_100024512 3300005841 Bacteria 5754
21 Ga0068860_100043203 3300005843 Bacteria 4301
22 Ga0068862_100016773 3300005844 Bacteria 6098
23 Ga0081455_10002920 3300005937 Bacteria 20055
24 Ga0070717_10021823 3300006028 Bacteria 5051
25 Ga0070717_10046978 3300006028 Bacteria 3535
26 Ga0070712_100035553 3300006175 Bacteria 3382
27 Ga0075366_10022343 3300006195 Bacteria 3678
28 Ga0068871_100007572 3300006358 Bacteria 7769
29 Ga0075428_100026883 3300006844 Bacteria 6372
30 Ga0075428_100050552 3300006844 Bacteria 4558
31 Ga0075428_100216130 3300006844 Bacteria 2071
32 Ga0075430_100012139 3300006846 Bacteria 7335
33 Ga0075430_100038971 3300006846 Bacteria 4024
34 Ga0075431_100006319 3300006847 Bacteria 11767
35 Ga0075433_10005693 3300006852 Bacteria 9798
36 Ga0075433_10019718 3300006852 Bacteria 5625
37 Ga0075434_100000938 3300006871 Bacteria 23449
38 Ga0075434_100057092 3300006871 Bacteria 3880
39 Ga0075429_100005104 3300006880 Bacteria 11289
40 Ga0075429_100009899 3300006880 Bacteria 8266
41 Ga0075436_100005330 3300006914 Bacteria 8844
42 Ga0099794_10003739 3300007265 Bacteria 5859
43 Ga0099794_10015231 3300007265 Bacteria 3390
44 Ga0099795_10009177 3300007788 Bacteria 2858
45 Ga0111539_10003302 3300009094 Bacteria 21321
46 Ga0114129_10006141 3300009147 Bacteria 17035
47 Ga0114129_10014221 3300009147 Bacteria 11340
48 Ga0157369_10049101 3300013105 Bacteria 4575
49 Ga0157372_10009003 3300013307 Bacteria 10611
50 Ga0213874_10001475 3300021377 Bacteria 4886
51 Ga0213875_10000003 3300021388 Bacteria 719367
52 Ga0207682_10016239 3300025893 Bacteria 2902
53 Ga0207705_10001522 3300025909 Bacteria 18397
54 Ga0207705_10005030 3300025909 Bacteria 9917
55 Ga0207684_10000220 3300025910 Bacteria 88359
56 Ga0207684_10001286 3300025910 Bacteria 27674
57 Ga0207684_10002868 3300025910 Bacteria 17112
58 Ga0207693_10000460 3300025915 Bacteria 37218
59 Ga0207663_10017339 3300025916 Bacteria 4010
60 Ga0207657_10003216 3300025919 Bacteria 17490
61 Ga0207664_10021190 3300025929 Bacteria 4828
62 Ga0207664_10054869 3300025929 Bacteria 3159
63 Ga0207670_10035971 3300025936 Bacteria 3217
64 Ga0207691_10103425 3300025940 Bacteria 2540
65 Ga0207428_10004778 3300027907 Bacteria 12799
66 Ga0268265_10003534 3300028380 Bacteria 11179
67 Ga0265323_10001127 3300028653 Bacteria 13785
68 Ga0265331_10013928 3300031250 Bacteria 4301
69 Ga0265327_10000596 3300031251 Bacteria 60242
70 Ga0265316_10002268 3300031344 Bacteria 20147
71 Ga0373941_0010224 3300035115 Bacteria 2390
72 Ga0373942_0002158 3300035207 Bacteria 4855
73 Ga0373931_0004056 3300035691 Bacteria 6640
74 Ga0373935_0071279 3300035692 Bacteria 2242
75 Ga0373933_0004126 3300035724 Bacteria 8003
76 Ga0373937_0018747 3300036401 Bacteria 6185
77 Ga0436364_0636395 3300037853 Bacteria 1575
78 Ga0436364_0935612 3300037853 Bacteria 116078
79 Ga0436364_0961233 3300037853 Bacteria 5754
80 Ga0436365_0164876 3300039437 Bacteria 2170
81 Ga0436363_0500169 3300039450 Bacteria 7123
82 Ga0436362_1090442 3300039453 Bacteria 7539
83 Ga0453684_0000519 3300044712 Bacteria 147315
84 Ga0451576_0000159 3300045051 Bacteria 171363
85 Ga0451576_0000355 3300045051 Bacteria 110049
86 Ga0495580_0000152 3300046472 Bacteria 50358
87 Ga0495640_0008951 3300046533 Bacteria 7817
88 Ga0496105_0099704 3300048908 Bacteria 2399
89 Ga0496106_0008008 3300048909 Bacteria 7809
90 Ga0496107_0005951 3300048910 Bacteria 8356
91 Ga0496108_0003684 3300048911 Bacteria 12291
92 Ga0496108_0018557 3300048911 Bacteria 5697
93 Ga0496109_0000361 3300048912 Bacteria 42221
94 Ga0496109_0018569 3300048912 Bacteria 6109
95 Ga0496109_0055806 3300048912 Bacteria 3604
96 Ga0496110_0009881 3300048913 Bacteria 7733
97 Ga0496110_0028739 3300048913 Bacteria 4779
98 Ga0496111_0043489 3300048914 Bacteria 3228
99 Ga0496112_0003390 3300048915 Bacteria 13162
100 Ga0496112_0117335 3300048915 Bacteria 2632
101 Ga0496113_0062778 3300048916 Bacteria 2806
102 Ga0496114_0157351 3300048917 Bacteria 1973
103 Ga0501038_0005809 3300049574 Bacteria 11424
104 Ga0501039_0055546 3300049575 Bacteria 3067
105 Ga0501039_0061303 3300049575 Bacteria 2913
106 Ga0501042_0058959 3300049578 Bacteria 2741
107 Ga0501046_0028395 3300049580 Bacteria 4556
108 Ga0501047_0136195 3300049581 Bacteria 2336
109 Ga0501048_0098499 3300049582 Bacteria 2062
110 Ga0501071_0011097 3300049587 Bacteria 6056
111 Ga0501072_0001082 3300049588 Bacteria 20218
112 Ga0501072_0041896 3300049588 Bacteria 3596
113 Ga0501075_0000177 3300049591 Bacteria 33160
114 Ga0501075_0007348 3300049591 Bacteria 7642
115 Ga0501075_0039245 3300049591 Bacteria 3544
116 Ga0501076_0000014 3300049592 Bacteria 97509
117 Ga0501076_0007391 3300049592 Bacteria 7995
118 Ga0501076_0034017 3300049592 Bacteria 3981
119 Ga0501079_0010223 3300049741 Bacteria 7124
120 Ga0501081_0000816 3300049743 Bacteria 18394
121 Ga0501081_0002703 3300049743 Bacteria 11218
122 Ga0501081_0006857 3300049743 Bacteria 7406
123 Ga0501044_0113345 3300049823 Bacteria 2719
124 nmdc:mga0yw44_2467_c1 3300050492 Bacteria 7898
125 nmdc:mga05p37_4320_c1 3300050507 Bacteria 16605
126 nmdc:mga09592_2101_c1 3300050508 Bacteria 16083
127 nmdc:mga09592_85165_c1 3300050508 Bacteria 2696
128 nmdc:mga06r32_2437_c1 3300050510 Bacteria 16636
129 nmdc:mga06r32_3081_c1 3300050510 Bacteria 14921
130 nmdc:mga08y16_3109_c1 3300050511 Bacteria 17190
131 nmdc:mga0n895_13411_c1 3300050512 Bacteria 7392
132 nmdc:mga0n895_7817_c1 3300050512 Bacteria 9214
133 nmdc:mga0n895_78641_c1 3300050512 Bacteria 3283
134 nmdc:mga0rr50_5563_c1 3300050513 Bacteria 7536
135 nmdc:mga0rr50_8238_c1 3300050513 Bacteria 6476
136 nmdc:mga08x19_5401_c1 3300050514 Bacteria 7555
137 nmdc:mga0a205_4756_c1 3300050515 Bacteria 11822
138 nmdc:mga0a205_47860_c1 3300050515 Bacteria 4126
139 nmdc:mga0a205_55773_c1 3300050515 Bacteria 3816
140 nmdc:mga0a205_7058_c1 3300050515 Bacteria 10148
141 Ga0500616_0000084 3300053153 Bacteria 195562
142 Ga0500622_0000730 3300053156 Bacteria 28702
143 Ga0501084_0009259 3300054114 Bacteria 8148
144 Ga0501084_0027670 3300054114 Bacteria 4738
145 Ga0501084_0046253 3300054114 Bacteria 3645
146 Ga0590071_002755 3300059421 Bacteria 4404
147 Ga0501082_0002113 3300060353 Bacteria 17497
148 Ga0501082_0053522 3300060353 Bacteria 3479
149 Ga0530510_0000045 3300061734 Bacteria 56772
150 Ga0530510_0000684 3300061734 Bacteria 21892
151 Ga0530510_0016471 3300061734 Bacteria 5233
152 2894514342 2894510363 Bacteria 5121143
153 2857350669 2857349434 Bacteria 7926032
154 2987637853 2987636660 Bacteria 8088555
155 3004205825 3004203850 Bacteria 7307914
156 Ga0070658_10006523
157 Ga0070660_100003085
158 Ga0070709_10006704
159 Ga0070714_100005595
160 Ga0070714_100009176
161 Ga0070710_10000601
162 Ga0070705_100000729
163 Ga0070705_100021825
164 Ga0070694_100009408
165 Ga0070708_100009626
166 Ga0070685_10024630
167 Ga0070706_100001844
168 Ga0070706_100008112
169 Ga0070697_100000875
170 Ga0070697_100062109
171 Ga0070672_100081194
172 Ga0070693_100002958
173 Ga0068855_100112859
174 Ga0068852_100001626
175 Ga0068863_100024512
176 Ga0068860_100043203
177 Ga0068862_100016773
178 Ga0081455_10002920
179 Ga0070717_10021823
180 Ga0070717_10046978
181 Ga0070712_100035553
182 Ga0075366_10022343
183 Ga0068871_100007572
184 Ga0075428_100026883
185 Ga0075428_100050552
186 Ga0075428_100216130
187 Ga0075430_100012139
188 Ga0075430_100038971
189 Ga0075431_100006319
190 Ga0075433_10005693
191 Ga0075433_10019718
192 Ga0075434_100000938
193 Ga0075434_100057092
194 Ga0075429_100005104
195 Ga0075429_100009899
196 Ga0075436_100005330
197 Ga0099794_10003739
198 Ga0099794_10015231
199 Ga0099795_10009177
200 Ga0111539_10003302
201 Ga0114129_10006141
202 Ga0114129_10014221
203 Ga0157369_10049101
204 Ga0157372_10009003
205 Ga0213874_10001475
206 Ga0213875_10000003
207 Ga0207682_10016239
208 Ga0207705_10001522
209 Ga0207705_10005030
210 Ga0207684_10000220
211 Ga0207684_10001286
212 Ga0207684_10002868
213 Ga0207693_10000460
214 Ga0207663_10017339
215 Ga0207657_10003216
216 Ga0207664_10021190
217 Ga0207664_10054869
218 Ga0207670_10035971
219 Ga0207691_10103425
220 Ga0207428_10004778
221 Ga0268265_10003534
222 Ga0265323_10001127
223 Ga0265331_10013928
224 Ga0265327_10000596
225 Ga0265316_10002268
226 Ga0373941_0010224
227 Ga0373942_0002158
228 Ga0373931_0004056
229 Ga0373935_0071279
230 Ga0373933_0004126
231 Ga0373937_0018747
232 Ga0436364_0636395
233 Ga0436364_0935612
234 Ga0436364_0961233
235 Ga0436365_0164876
236 Ga0436363_0500169
237 Ga0436362_1090442
238 Ga0453684_0000519
239 Ga0451576_0000159
240 Ga0451576_0000355
241 Ga0495580_0000152
242 Ga0495640_0008951
243 Ga0496105_0099704
244 Ga0496106_0008008
245 Ga0496107_0005951
246 Ga0496108_0003684
247 Ga0496108_0018557
248 Ga0496109_0000361
249 Ga0496109_0018569
250 Ga0496109_0055806
251 Ga0496110_0009881
252 Ga0496110_0028739
253 Ga0496111_0043489
254 Ga0496112_0003390
255 Ga0496112_0117335
256 Ga0496113_0062778
257 Ga0496114_0157351
258 Ga0501038_0005809
259 Ga0501039_0055546
260 Ga0501039_0061303
261 Ga0501042_0058959
262 Ga0501046_0028395
263 Ga0501047_0136195
264 Ga0501048_0098499
265 Ga0501071_0011097
266 Ga0501072_0001082
267 Ga0501072_0041896
268 Ga0501075_0000177
269 Ga0501075_0007348
270 Ga0501075_0039245
271 Ga0501076_0000014
272 Ga0501076_0007391
273 Ga0501076_0034017
274 Ga0501079_0010223
275 Ga0501081_0000816
276 Ga0501081_0002703
277 Ga0501081_0006857
278 Ga0501044_0113345
279 nmdc:mga0yw44_2467_c1
280 nmdc:mga05p37_4320_c1
281 nmdc:mga09592_2101_c1
282 nmdc:mga09592_85165_c1
283 nmdc:mga06r32_2437_c1
284 nmdc:mga06r32_3081_c1
285 nmdc:mga08y16_3109_c1
286 nmdc:mga0n895_13411_c1
287 nmdc:mga0n895_7817_c1
288 nmdc:mga0n895_78641_c1
289 nmdc:mga0rr50_5563_c1
290 nmdc:mga0rr50_8238_c1
291 nmdc:mga08x19_5401_c1
292 nmdc:mga0a205_4756_c1
293 nmdc:mga0a205_47860_c1
294 nmdc:mga0a205_55773_c1
295 nmdc:mga0a205_7058_c1
296 Ga0500616_0000084
297 Ga0500622_0000730
298 Ga0501084_0009259
299 Ga0501084_0027670
300 Ga0501084_0046253
301 Ga0590071_002755
302 Ga0501082_0002113
303 Ga0501082_0053522
304 Ga0530510_0000045
305 Ga0530510_0000684
306 Ga0530510_0016471
307 2894514342
308 2857350669
309 2987637853
310 3004205825

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16861

Carbam_trans_C

Carbamoyltransferase C-terminus

438

627

0.98

PF02543

Carbam_trans_N

Carbamoyltransferase N-terminus

37

381

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xb6-assembly4.cif.gz_D crystal structure of the o-carbamoyltransferase vtdb in complex with carbamoyl adenylate intermediate 0.8538 13 546
6xj6-assembly1.cif.gz_A crystal structure of the helical cell shape determining protein pgp2 from campylobacter jejuni 0.8409 142 176
7vzq-assembly1.cif.gz_A the structure of gdmn v24y/g157a/r158a/g188r mutant in complex with carbamoyl adenylate intermediate 0.8329 4 546
6xj7-assembly2.cif.gz_B crystal structure of the helical cell shape determining protein pgp2 (k307a mutant) from campylobacter jejuni 0.8309 142 176
7vzu-assembly1.cif.gz_A the structure of gdmn y82f mutant 0.8306 4 546
ID Description Score Start End Superfamily
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9603 346 545 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9343 346 544 3.90.870.20
3vewA03 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.924 346 545 3.90.870.20
af_Q58451_301_510_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.9213 346 545 3.90.870.20
af_Q58458_398_606_3.90.870.20 Alpha Beta;Alpha-Beta Complex;DHBP synthase;Carbamoyltransferase, C-terminal domain 0.8872 346 544 3.90.870.20
ID Description Score Start End GO Terms
AF-A0A7W0MQF0-F1-model_v4 Carbamoyltransferase 0.9688 376 548 GO:0016740
AF-A0A7C5ZUJ8-F1-model_v4 Carbamoyltransferase C-terminal domain-containing protein 0.9654 378 551
AF-A0A382ECZ4-F1-model_v4 Carbamoyltransferase C-terminal domain-containing protein 0.9652 364 547
AF-A0A352FHI3-F1-model_v4 Carbamoyltransferase 0.9624 344 548 GO:0016740
AF-A0A2V8R0V2-F1-model_v4 Carbamoyltransferase C-terminal domain-containing protein 0.9603 376 547

Map