F223181

General Info

Members Datasets Scaffolds Average Seq Length
155 121 310 397

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0005530|Ga0496117_0005530_4227_5423
Length 369
Sequence MSDADRSFGGASTGAGEIFQLLLDGHARTKADLVHLTGLARSTVSSRVDALLASGLVIPAGEAASTGGRPPSRVAFNPRAGLVLAVDLGASHATIAVSDLGGRILASITHALDIASGPVAVLDRVVAEGRTLLDDASLRTIPVVGVGIGVPGPVEHSSGRPYNPPIMPGWDRFDIPAYVQQTDVNVLALGEQTASFPETTDLIFVKVATGIGAGIIAGGTLQRGAQNDEDRDLEDLASGSAIAAVLRAQGAEAETSNDVVELVRSGNPAAIEALRQAGRDVGEVLATVVNLLNPSVIVLGGSIARAGEHLLAGVREVVYRRSIPLATQHLAIVQSPTGERAAVLGAAVLVAREVLSPANVDARVTAAAR

Samples

Sample ID Description Type Environment
1 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
13 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
14 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
15 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
16 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
17 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
22 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
23 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
24 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
25 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
26 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
27 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
28 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
29 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
30 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
31 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
32 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
33 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
34 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
35 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
36 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
37 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
38 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
39 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
40 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
41 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
42 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
43 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
44 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
45 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
46 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
47 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
48 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
49 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
50 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
51 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
52 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
53 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
54 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
55 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
56 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
57 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
58 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
59 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
60 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
61 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
62 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
63 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
64 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
65 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
66 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
67 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
68 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
69 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
70 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
71 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
72 2643221546 Microbacterium sp. Root53 Isolate Unclassified
73 2643221549 Agromyces sp. Root1464 Isolate Unclassified
74 2643221566 Microbacterium sp. Root166 Isolate Unclassified
75 2643221572 Leifsonia sp. Root60 Isolate Unclassified
76 2643221575 Microbacterium sp. Root61 Isolate Unclassified
77 2643221597 Microbacterium sp. Root180 Isolate Unclassified
78 2643221616 Leifsonia sp. Root227 Isolate Unclassified
79 2643221619 Agromyces sp. Root81 Isolate Unclassified
80 2643221649 Leifsonia sp. Root4 Isolate Unclassified
81 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
82 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
83 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
84 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
85 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
86 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
87 2773857759 Microbacterium sp. 1294 Isolate Unclassified
88 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
89 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
90 2808606372 Agromyces sp. 23-23 Isolate Unclassified
91 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
92 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
93 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
94 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
95 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
96 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
97 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
98 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
99 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
100 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
101 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
102 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
103 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
104 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
105 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
106 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
107 2919069694 Microbacterium sp. 1154 Isolate Unclassified
108 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
109 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
110 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
111 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
112 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
113 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
114 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
115 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
116 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
117 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
118 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
119 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
120 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
121 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 66.45
Metatranscriptomes 0
Isolates 33.55

Biome Distribution

Category Percentage (%)
Aerial Root 1.29
Bulb 0
Endosphere 10.32
Nodule 0
Rhizoplane 0
Rhizosphere 53.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496117_0005530 3300048920 Bacteria 13231
2 JGI25154J39366_1001709 3300002738 Bacteria 7182
3 JGI25406J46586_10000396 3300003203 Bacteria 19980
4 Ga0065714_10020083 3300005288 Bacteria 1750
5 Ga0070671_100035796 3300005355 Bacteria 4114
6 Ga0070667_100008380 3300005367 Bacteria 8571
7 Ga0070678_100193136 3300005456 Bacteria 1675
8 Ga0068861_100014660 3300005719 Bacteria 5504
9 Ga0081539_10000310 3300005985 Bacteria 109306
10 Ga0075365_10002235 3300006038 Bacteria 9365
11 Ga0075364_10012550 3300006051 Bacteria 5188
12 Ga0075369_10001873 3300006186 Bacteria 7353
13 Ga0105028_104237 3300009993 Bacteria 1496
14 Ga0171462_1004 3300013250 Bacteria 678877
15 Ga0157380_10011304 3300014326 Bacteria 6446
16 Ga0209646_1000013 3300025246 Bacteria 565830
17 Ga0207658_10005196 3300025986 Bacteria 8963
18 Ga0207675_100073584 3300026118 Bacteria 3197
19 Ga0207683_10089373 3300026121 Bacteria 2741
20 Ga0268265_10112926 3300028380 Bacteria 2222
21 Ga0307513_10024944 3300031456 Bacteria 6944
22 Ga0307514_10002631 3300031649 Bacteria 18347
23 Ga0307413_10151272 3300031824 Bacteria 1618
24 Ga0307406_10000466 3300031901 Bacteria 23362
25 Ga0307406_10001671 3300031901 Bacteria 12191
26 Ga0307406_10014825 3300031901 Bacteria 4493
27 Ga0307406_10030260 3300031901 Bacteria 3286
28 Ga0307412_10050218 3300031911 Bacteria 2752
29 Ga0307409_100229239 3300031995 Bacteria 1683
30 Ga0307409_100392976 3300031995 Bacteria 1322
31 Ga0307414_10248519 3300032004 Bacteria 1477
32 Ga0439449_0002572 3300042007 Bacteria 7087
33 Ga0466965_0000006 3300044683 Bacteria 158069
34 Ga0466965_0012424 3300044683 Bacteria 4005
35 Ga0466968_0072169 3300044735 Bacteria 1505
36 Ga0466970_0086243 3300044765 Bacteria 1701
37 Ga0495590_0003414 3300046457 Bacteria 6490
38 Ga0495638_0034891 3300046460 Bacteria 3210
39 Ga0495654_0107652 3300046530 Bacteria 1275
40 Ga0495672_0097696 3300047320 Bacteria 1599
41 Ga0496116_0038349 3300048919 Bacteria 3328
42 Ga0496117_0002452 3300048920 Bacteria 23373
43 Ga0496117_0118441 3300048920 Bacteria 1632
44 Ga0496118_0000472 3300048921 Bacteria 66796
45 Ga0496118_0033011 3300048921 Bacteria 4255
46 Ga0496119_0016778 3300048922 Bacteria 5547
47 Ga0496119_0017894 3300048922 Bacteria 5307
48 Ga0496122_0000111 3300048925 Bacteria 189920
49 Ga0496122_0003875 3300048925 Bacteria 19194
50 Ga0496122_0009526 3300048925 Bacteria 10210
51 Ga0496122_0046484 3300048925 Bacteria 3361
52 Ga0496122_0164232 3300048925 Bacteria 1349
53 Ga0496123_0000006 3300048926 Bacteria 647258
54 Ga0496123_0060136 3300048926 Bacteria 2451
55 Ga0496123_0064806 3300048926 Bacteria 2326
56 Ga0496124_0000040 3300048927 Bacteria 307061
57 Ga0496124_0003085 3300048927 Bacteria 20739
58 Ga0496124_0042450 3300048927 Bacteria 3916
59 Ga0496125_0000360 3300048928 Bacteria 86040
60 Ga0496125_0004891 3300048928 Bacteria 15192
61 Ga0496126_0073989 3300048929 Bacteria 3026
62 Ga0496126_0262850 3300048929 Bacteria 1434
63 Ga0501034_0012657 3300049571 Bacteria 8704
64 Ga0501034_0068629 3300049571 Bacteria 3555
65 Ga0501034_0071392 3300049571 Bacteria 3481
66 Ga0501034_0079079 3300049571 Bacteria 3292
67 Ga0501034_0115362 3300049571 Bacteria 2674
68 Ga0501034_0142083 3300049571 Bacteria 2379
69 Ga0501034_0148407 3300049571 Bacteria 2321
70 Ga0501037_0030088 3300049573 Bacteria 4012
71 Ga0501039_0098417 3300049575 Bacteria 2282
72 Ga0501043_0025044 3300049579 Bacteria 4681
73 Ga0501047_0053195 3300049581 Bacteria 3914
74 Ga0501068_0037208 3300049584 Bacteria 2914
75 Ga0501068_0156999 3300049584 Bacteria 1433
76 Ga0501070_0000810 3300049586 Bacteria 28411
77 Ga0501070_0003038 3300049586 Bacteria 14613
78 Ga0501071_0203084 3300049587 Bacteria 1489
79 Ga0501073_0019545 3300049589 Bacteria 4889
80 Ga0501073_0077768 3300049589 Bacteria 2309
81 Ga0501075_0179099 3300049591 Bacteria 1617
82 Ga0501076_0266895 3300049592 Bacteria 1401
83 Ga0501080_0000025 3300049742 Bacteria 89908
84 Ga0501080_0092905 3300049742 Bacteria 2802
85 Ga0501081_0015233 3300049743 Bacteria 5072
86 Ga0501045_0042414 3300049824 Bacteria 3311
87 nmdc:mga00v17_11825_c1 3300050491 Bacteria 4802
88 nmdc:mga00v17_28338_c1 3300050491 Bacteria 3279
89 nmdc:mga0yw44_42069_c1 3300050492 Bacteria 2723
90 Ga0500650_0039472 3300053098 Bacteria 2176
91 Ga0500556_0000087 3300053104 Bacteria 86120
92 Ga0500655_001243 3300053133 Bacteria 4836
93 Ga0500559_0000357 3300053136 Bacteria 34081
94 Ga0500559_0002163 3300053136 Bacteria 10412
95 Ga0500568_0000194 3300053139 Bacteria 52981
96 Ga0500568_0000664 3300053139 Bacteria 24869
97 Ga0500568_0007047 3300053139 Bacteria 5557
98 Ga0500577_0001811 3300053142 Bacteria 5455
99 Ga0500616_0001756 3300053153 Bacteria 19850
100 Ga0501084_0034461 3300054114 Bacteria 4234
101 Ga0501084_0270474 3300054114 Bacteria 1435
102 Ga0501082_0120313 3300060353 Bacteria 2276
103 Ga0530510_0028785 3300061734 Bacteria 3983
104 2587864581 2585428094 Bacteria 3604039
105 2588107340 2585428157 Bacteria 3018951
106 2643751804 2643221546 Bacteria 2910897
107 2643766565 2643221549 Bacteria 4042819
108 2643846536 2643221566 Bacteria 3460379
109 2643877593 2643221572 Bacteria 3614809
110 2643886486 2643221575 Bacteria 4022601
111 2643996646 2643221597 Bacteria 3347721
112 2644095194 2643221616 Bacteria 4066575
113 2644113830 2643221619 Bacteria 4158469
114 2644279025 2643221649 Bacteria 3867359
115 2644384648 2643221669 Bacteria 3611286
116 2644681281 2643221724 Bacteria 3593515
117 2730230286 2728369380 Bacteria 3620317
118 2747953862 2747842429 Bacteria 3914386
119 2753302730 2751185788 Bacteria 4541048
120 2774379824 2773857758 Bacteria 3592392
121 2774383144 2773857759 Bacteria 2963774
122 2774397739 2773857763 Bacteria 4180068
123 2808630217 2808606306 Bacteria 3608896
124 2808903700 2808606372 Bacteria 4649509
125 2812324966 2811994872 Bacteria 4121241
126 2833711971 2833709550 Bacteria 4008291
127 2852634917 2852632344 Bacteria 3463163
128 2857737657 2857737099 Bacteria 3104305
129 2861527323 2861520306 Bacteria 8348283
130 2884994586 2884994152 Bacteria 4492978
131 2895662429 2895660088 Bacteria 3782833
132 2904433473 2904430863 Bacteria 3486923
133 2904504021 2904501621 Bacteria 3401437
134 2904512606 2904509784 Bacteria 3520416
135 2908676986 2908674828 Bacteria 3382763
136 2908679144 2908678064 Bacteria 3482747
137 2909076836 2909074476 Bacteria 3436050
138 2919039448 2919039151 Bacteria 3391018
139 2919042840 2919042368 Bacteria 3905917
140 2919054850 2919051321 Bacteria 4210889
141 2919069786 2919069694 Bacteria 3622919
142 2919444525 2919443155 Bacteria 4072969
143 2928106196 2928104781 Bacteria 3877447
144 2928502128 2928500415 Bacteria 3384541
145 2935412047 2935409751 Bacteria 4179611
146 2946084437 2946080515 Bacteria 4310960
147 2977238604 2977236895 Bacteria 3569373
148 2977264530 2977264416 Bacteria 3750737
149 2984543614 2984542743 Bacteria 3569378
150 2984554878 2984551494 Bacteria 3877562
151 2995726524 2995726249 Bacteria 3470435
152 8004185816 8004182704 Bacteria 3391155
153 8045834156 8045830549 Bacteria 4444727
154 8046355184 8046352972 Bacteria 3613806
155 8055034811 8055034563 Bacteria 3562128
156 Ga0496117_0005530
157 JGI25154J39366_1001709
158 JGI25406J46586_10000396
159 Ga0065714_10020083
160 Ga0070671_100035796
161 Ga0070667_100008380
162 Ga0070678_100193136
163 Ga0068861_100014660
164 Ga0081539_10000310
165 Ga0075365_10002235
166 Ga0075364_10012550
167 Ga0075369_10001873
168 Ga0105028_104237
169 Ga0171462_1004
170 Ga0157380_10011304
171 Ga0209646_1000013
172 Ga0207658_10005196
173 Ga0207675_100073584
174 Ga0207683_10089373
175 Ga0268265_10112926
176 Ga0307513_10024944
177 Ga0307514_10002631
178 Ga0307413_10151272
179 Ga0307406_10000466
180 Ga0307406_10001671
181 Ga0307406_10014825
182 Ga0307406_10030260
183 Ga0307412_10050218
184 Ga0307409_100229239
185 Ga0307409_100392976
186 Ga0307414_10248519
187 Ga0439449_0002572
188 Ga0466965_0000006
189 Ga0466965_0012424
190 Ga0466968_0072169
191 Ga0466970_0086243
192 Ga0495590_0003414
193 Ga0495638_0034891
194 Ga0495654_0107652
195 Ga0495672_0097696
196 Ga0496116_0038349
197 Ga0496117_0002452
198 Ga0496117_0118441
199 Ga0496118_0000472
200 Ga0496118_0033011
201 Ga0496119_0016778
202 Ga0496119_0017894
203 Ga0496122_0000111
204 Ga0496122_0003875
205 Ga0496122_0009526
206 Ga0496122_0046484
207 Ga0496122_0164232
208 Ga0496123_0000006
209 Ga0496123_0060136
210 Ga0496123_0064806
211 Ga0496124_0000040
212 Ga0496124_0003085
213 Ga0496124_0042450
214 Ga0496125_0000360
215 Ga0496125_0004891
216 Ga0496126_0073989
217 Ga0496126_0262850
218 Ga0501034_0012657
219 Ga0501034_0068629
220 Ga0501034_0071392
221 Ga0501034_0079079
222 Ga0501034_0115362
223 Ga0501034_0142083
224 Ga0501034_0148407
225 Ga0501037_0030088
226 Ga0501039_0098417
227 Ga0501043_0025044
228 Ga0501047_0053195
229 Ga0501068_0037208
230 Ga0501068_0156999
231 Ga0501070_0000810
232 Ga0501070_0003038
233 Ga0501071_0203084
234 Ga0501073_0019545
235 Ga0501073_0077768
236 Ga0501075_0179099
237 Ga0501076_0266895
238 Ga0501080_0000025
239 Ga0501080_0092905
240 Ga0501081_0015233
241 Ga0501045_0042414
242 nmdc:mga00v17_11825_c1
243 nmdc:mga00v17_28338_c1
244 nmdc:mga0yw44_42069_c1
245 Ga0500650_0039472
246 Ga0500556_0000087
247 Ga0500655_001243
248 Ga0500559_0000357
249 Ga0500559_0002163
250 Ga0500568_0000194
251 Ga0500568_0000664
252 Ga0500568_0007047
253 Ga0500577_0001811
254 Ga0500616_0001756
255 Ga0501084_0034461
256 Ga0501084_0270474
257 Ga0501082_0120313
258 Ga0530510_0028785
259 2587864581
260 2588107340
261 2643751804
262 2643766565
263 2643846536
264 2643877593
265 2643886486
266 2643996646
267 2644095194
268 2644113830
269 2644279025
270 2644384648
271 2644681281
272 2730230286
273 2747953862
274 2753302730
275 2774379824
276 2774383144
277 2774397739
278 2808630217
279 2808903700
280 2812324966
281 2833711971
282 2852634917
283 2857737657
284 2861527323
285 2884994586
286 2895662429
287 2904433473
288 2904504021
289 2904512606
290 2908676986
291 2908679144
292 2909076836
293 2919039448
294 2919042840
295 2919054850
296 2919069786
297 2919444525
298 2928106196
299 2928502128
300 2935412047
301 2946084437
302 2977238604
303 2977264530
304 2984543614
305 2984554878
306 2995726524
307 8004185816
308 8045834156
309 8046355184
310 8055034811

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00480

ROK

ROK family

231

353

0.9

PF00480

ROK

ROK family

83

228

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hso-assembly1.cif.gz_D crystal structure of mycobacterium tuberculosis marr family protein rv2887 complex with dna 0.9188 22 86
2fa5-assembly1.cif.gz_A the crystal structure of an unliganded multiple antibiotic-resistance repressor (marr) from xanthomonas campestris 0.9133 25 85
4yif-assembly3.cif.gz_F crystal structure of rv0880 0.9122 22 84
2qww-assembly2.cif.gz_C crystal structure of multiple antibiotic-resistance repressor (marr) (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a resolution 0.9099 22 84
2fa5-assembly1.cif.gz_B the crystal structure of an unliganded multiple antibiotic-resistance repressor (marr) from xanthomonas campestris 0.9032 22 85
ID Description Score Start End Superfamily
af_A0A1D6DWZ1_6_279_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9323 88 118 3.30.420.40
af_Q58187_3_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9216 22 65 1.10.10.10
4ejtB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9123 22 84 1.10.10.10
3f72D00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9037 24 65 1.10.10.10
4ijaB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8983 22 84 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1H4J8E1-F1-model_v4 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 0.9192 10 402 GO:0016301
AF-A0A4R5CRJ7-F1-model_v4 ROK family transcriptional regulator 0.9157 19 401 GO:0003824
AF-A0A1H4J8E1-F1-model_v4 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 0.9146 10 402 GO:0016301
AF-A0A357F351-F1-model_v4 ROK family protein 0.9127 268 384 GO:0003824
AF-A0A4R2R1B4-F1-model_v4 Putative NBD/HSP70 family sugar kinase 0.9108 15 399 GO:0016301

Map