F221302

General Info

Members Datasets Scaffolds Average Seq Length
155 130 310 461

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100008544|Ga0070683_1000085442
Length 511
Sequence MPAGIVRIGEIAVSDESARHADPGRPATVRSAPQSAPSVPAPRSGEVAPDRVATGTADRTAEVSDRGDAVCVIGAGGSGLAAIKNFKQYGFDVDCYERETGVGGAWNWRHERSPVYASTHLISSKPFTQFPDFPMPDDWPDYPHHSTLLTYFERYADHFGLREHIWFGTEVVKVVPTSDEPTTTWDVTVRGVRGGALKTLRYAAVVVANGHNWAPKLPRYDGLDSFAGTVLHASAYKDAAQVRGKRVLVVGAGNTGCDIAVEAAQQGAKCWHSSRRGYWYAPKYALGKPADQVNDRVLGMGLPLRLRQWLFHLTMRATVGDLTRFGLPKPDHKVFETHPIANSQLVYHVGHGGIVPVPDVERFERNQVIFTDGRTADPDVVVLATGYLPRFEFLTPDLFGADERGRPSLRWQMFGPAHPTLSFAGLVQPDGGIFTIAHWQTELAAAWLRLAETAPERALKWWTRAAEPGRRYADADVKDSSRHWLEISHWVYLKALQRALTDLTSGKVKTT

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
67 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
70 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
79 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
82 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
83 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
84 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
85 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
86 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
87 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
88 2501939600 Micromonospora sp. L5 Isolate Unclassified
89 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
90 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
91 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
92 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
93 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
94 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
95 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
96 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
97 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
98 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
99 2855683550 Micromonospora sp. RP3T Isolate Unclassified
100 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
101 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
102 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
103 2858868258 Micromonospora sp. MH33 Isolate Unclassified
104 2858882152 Micromonospora noduli MED15 Isolate Nodule
105 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
106 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
107 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
108 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
109 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
110 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
111 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
112 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
113 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
114 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
115 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
116 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
117 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
118 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
119 2902582711 Micromonospora sp. AP08 Isolate Unclassified
120 2928170801 Burkholderia sp. 572 Isolate Unclassified
121 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
122 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
123 649633069 Micromonospora sp. L5 Isolate Unclassified
124 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
125 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
126 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
127 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
128 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
129 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
130 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.61
Metatranscriptomes 0.65
Isolates 27.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.23
Nodule 3.23
Rhizoplane 4.52
Rhizosphere 61.94
Stem 0
Stem Tuber 0
Unclassified 1.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100008544 3300005329 Bacteria 8702
2 Ga0070658_10003585 3300005327 Bacteria 12729
3 Ga0070683_100014688 3300005329 Bacteria 6859
4 Ga0070683_100112822 3300005329 Bacteria 2565
5 Ga0068869_100017024 3300005334 Bacteria 4917
6 Ga0070680_100030538 3300005336 Bacteria 4329
7 Ga0068868_100020834 3300005338 Bacteria 4934
8 Ga0070660_100013862 3300005339 Bacteria 5799
9 Ga0070675_100000274 3300005354 Bacteria 34109
10 Ga0070700_100007855 3300005441 Bacteria 5787
11 Ga0070694_100032846 3300005444 Bacteria 3410
12 Ga0070663_100031808 3300005455 Bacteria 3630
13 Ga0070681_10041902 3300005458 Bacteria 4589
14 Ga0070699_100071404 3300005518 Bacteria 3020
15 Ga0070679_100024680 3300005530 Bacteria 5892
16 Ga0070684_100029904 3300005535 Bacteria 4623
17 Ga0070697_100006093 3300005536 Bacteria 9327
18 Ga0070696_100031209 3300005546 Unclassified 3651
19 Ga0070665_100121677 3300005548 Bacteria 2611
20 Ga0070704_100022453 3300005549 Unclassified 4107
21 Ga0070664_100006727 3300005564 Bacteria 9265
22 Ga0068864_100053045 3300005618 Bacteria 3496
23 Ga0068861_100030800 3300005719 Bacteria 3935
24 Ga0068863_100027328 3300005841 Bacteria 5442
25 Ga0081540_1002639 3300005983 Bacteria 14576
26 Ga0081539_10011978 3300005985 Bacteria 6760
27 Ga0081539_10031289 3300005985 Bacteria 3283
28 Ga0075430_100001360 3300006846 Bacteria 19815
29 Ga0075430_100007931 3300006846 Bacteria 8976
30 Ga0075430_100100606 3300006846 Bacteria 2414
31 Ga0075431_100024136 3300006847 Bacteria 6226
32 Ga0075429_100079598 3300006880 Bacteria 2856
33 Ga0111539_10001321 3300009094 Bacteria 33126
34 Ga0105245_10004775 3300009098 Bacteria 11956
35 Ga0114129_10063903 3300009147 Bacteria 5137
36 Ga0105239_10119591 3300010375 Bacteria 2924
37 Ga0157369_10026100 3300013105 Bacteria 6481
38 Ga0163163_10011728 3300014325 Bacteria 7961
39 Ga0182007_10036720 3300015262 Bacteria 1648
40 Ga0206353_11345449 3300020082 Bacteria 3636
41 Ga0209566_100508 3300025225 Bacteria 26972
42 Ga0209674_101665 3300025226 Bacteria 5531
43 Ga0207705_10053119 3300025909 Bacteria 2918
44 Ga0207657_10098193 3300025919 Bacteria 2434
45 Ga0207687_10065733 3300025927 Bacteria 2576
46 Ga0207706_10199557 3300025933 Bacteria 1755
47 Ga0207661_10002851 3300025944 Bacteria 11947
48 Ga0207661_10009806 3300025944 Bacteria 6878
49 Ga0207677_10048237 3300026023 Bacteria 2866
50 Ga0207678_10047529 3300026067 Bacteria 3711
51 Ga0207708_10002097 3300026075 Bacteria 14671
52 Ga0207674_10027884 3300026116 Bacteria 5966
53 Ga0207674_10096716 3300026116 Bacteria 2937
54 Ga0207698_10097831 3300026142 Bacteria 2423
55 Ga0268266_10061579 3300028379 Bacteria 3237
56 Ga0307515_10000356 3300028794 Bacteria 112492
57 Ga0307515_10032962 3300028794 Bacteria 8552
58 Ga0307515_10066568 3300028794 Bacteria 4988
59 Ga0307515_10132977 3300028794 Bacteria 2725
60 Ga0265332_10004883 3300031238 Bacteria 6234
61 Ga0307513_10097952 3300031456 Bacteria 2966
62 Ga0307408_100179160 3300031548 Bacteria 1698
63 Ga0307508_10005473 3300031616 Bacteria 12073
64 Ga0307508_10018177 3300031616 Bacteria 6388
65 Ga0307508_10041057 3300031616 Bacteria 4153
66 Ga0316576_10003751 3300031727 Bacteria 8970
67 Ga0307516_10001025 3300031730 Bacteria 38784
68 Ga0307516_10009115 3300031730 Bacteria 11114
69 Ga0307516_10029554 3300031730 Bacteria 5540
70 Ga0307516_10072157 3300031730 Bacteria 3312
71 Ga0307413_10046537 3300031824 Bacteria 2580
72 Ga0307406_10018755 3300031901 Bacteria 4048
73 Ga0307406_10030963 3300031901 Bacteria 3254
74 Ga0307406_10035503 3300031901 Bacteria 3067
75 Ga0307409_100001554 3300031995 Bacteria 11402
76 Ga0307415_100000113 3300032126 Bacteria 34898
77 Ga0307415_100010276 3300032126 Bacteria 5293
78 Ga0307415_100171746 3300032126 Bacteria 1691
79 Ga0395899_0018206 3300037312 Bacteria 5343
80 Ga0395900_0006298 3300037418 Bacteria 12378
81 Ga0395900_0312967 3300037418 Bacteria 1553
82 Ga0395898_0007314 3300037466 Bacteria 11723
83 Ga0395898_0010592 3300037466 Bacteria 9628
84 Ga0395901_0084636 3300038443 Bacteria 3314
85 Ga0436365_1622671 3300039437 Bacteria 2207
86 Ga0451577_0005384 3300042876 Bacteria 13133
87 Ga0466969_0011465 3300044656 Bacteria 4693
88 Ga0466966_0012037 3300044684 Bacteria 5733
89 Ga0453684_0069566 3300044712 Bacteria 4463
90 Ga0495594_0005648 3300046499 Bacteria 6433
91 Ga0495593_0062017 3300047673 Bacteria 1955
92 Ga0496106_0163732 3300048909 Bacteria 1760
93 Ga0496108_0000029 3300048911 Bacteria 167261
94 Ga0496108_0049904 3300048911 Bacteria 3501
95 Ga0496112_0015649 3300048915 Bacteria 7084
96 Ga0496112_0184176 3300048915 Bacteria 2052
97 Ga0496113_0055129 3300048916 Bacteria 2979
98 Ga0501034_0002365 3300049571 Bacteria 22914
99 Ga0501046_0053565 3300049580 Bacteria 3177
100 Ga0501072_0048712 3300049588 Bacteria 3336
101 Ga0501073_0136824 3300049589 Bacteria 1698
102 Ga0501077_0012165 3300049593 Bacteria 5386
103 Ga0501044_0336827 3300049823 Bacteria 1430
104 Ga0501045_0171266 3300049824 Bacteria 1617
105 nmdc:mga0qj67_25762_c1 3300050509 Bacteria 4548
106 nmdc:mga0qj67_2987_c1 3300050509 Bacteria 12140
107 nmdc:mga06r32_147369_c1 3300050510 Bacteria 2331
108 nmdc:mga06r32_2440_c1 3300050510 Bacteria 16631
109 Ga0500644_0012389 3300053088 Bacteria 2357
110 Ga0500646_0000454 3300053090 Bacteria 12163
111 Ga0500588_0004076 3300053146 Bacteria 3135
112 Ga0530510_0080565 3300061734 Bacteria 2370
113 2501942164 2501939600 Bacteria 6907073
114 2515495083 2515154088 Bacteria 5526283
115 2515719086 2515154129 Bacteria 5584369
116 2516083292 2515154202 Bacteria 5471270
117 2599734924 2599185239 Bacteria 8686614
118 2623590870 2622736626 Bacteria 7181580
119 2772644157 2772190715 Bacteria 6959372
120 2831936345 2831935698 Bacteria 5963223
121 2832010562 2832004796 Bacteria 6538017
122 2855676380 2855670206 Bacteria 7120389
123 2855681518 2855676851 Bacteria 7063653
124 2855686752 2855683550 Bacteria 7134265
125 2856864543 2856858025 Bacteria 7255264
126 2857291896 2857288857 Bacteria 7189066
127 2858855216 2858848962 Bacteria 6963058
128 2858873350 2858868258 Bacteria 7683772
129 2858888782 2858882152 Bacteria 7230291
130 2858889055 2858888857 Bacteria 7060307
131 2858897371 2858895516 Bacteria 7378898
132 2858905814 2858902515 Bacteria 7086037
133 2861521849 2861520306 Bacteria 8348283
134 2866067016 2866065130 Bacteria 6518152
135 2867303483 2867302475 Bacteria 7087181
136 2867316160 2867312974 Bacteria 7058875
137 2867321026 2867319477 Bacteria 7069771
138 2867511722 2867507094 Bacteria 6506033
139 2869052045 2869048445 Bacteria 6875584
140 2869063770 2869061728 Bacteria 7112407
141 2869073194 2869068681 Bacteria 7205615
142 2880489631 2880489317 Bacteria 7096270
143 2880496073 2880495981 Bacteria 7340502
144 2902588039 2902582711 Bacteria 6187705
145 2928175134 2928170801 Bacteria 8785406
146 2929224747 2929219909 Bacteria 6984360
147 2929232315 2929226422 Bacteria 7248583
148 649813930 649633069 Bacteria 6962533
149 8020955817 8020953355 Bacteria 7439080
150 8021121953 8021120328 Bacteria 8782274
151 8039104086 8039098773 Bacteria 6602928
152 8054707721 8054704163 Bacteria 7247792
153 8054732834 8054727385 Bacteria 7558670
154 8054738977 8054734606 Bacteria 6947278
155 8057572300 8057568493 Bacteria 7221719
156 Ga0070683_100008544
157 Ga0070658_10003585
158 Ga0070683_100014688
159 Ga0070683_100112822
160 Ga0068869_100017024
161 Ga0070680_100030538
162 Ga0068868_100020834
163 Ga0070660_100013862
164 Ga0070675_100000274
165 Ga0070700_100007855
166 Ga0070694_100032846
167 Ga0070663_100031808
168 Ga0070681_10041902
169 Ga0070699_100071404
170 Ga0070679_100024680
171 Ga0070684_100029904
172 Ga0070697_100006093
173 Ga0070696_100031209
174 Ga0070665_100121677
175 Ga0070704_100022453
176 Ga0070664_100006727
177 Ga0068864_100053045
178 Ga0068861_100030800
179 Ga0068863_100027328
180 Ga0081540_1002639
181 Ga0081539_10011978
182 Ga0081539_10031289
183 Ga0075430_100001360
184 Ga0075430_100007931
185 Ga0075430_100100606
186 Ga0075431_100024136
187 Ga0075429_100079598
188 Ga0111539_10001321
189 Ga0105245_10004775
190 Ga0114129_10063903
191 Ga0105239_10119591
192 Ga0157369_10026100
193 Ga0163163_10011728
194 Ga0182007_10036720
195 Ga0206353_11345449
196 Ga0209566_100508
197 Ga0209674_101665
198 Ga0207705_10053119
199 Ga0207657_10098193
200 Ga0207687_10065733
201 Ga0207706_10199557
202 Ga0207661_10002851
203 Ga0207661_10009806
204 Ga0207677_10048237
205 Ga0207678_10047529
206 Ga0207708_10002097
207 Ga0207674_10027884
208 Ga0207674_10096716
209 Ga0207698_10097831
210 Ga0268266_10061579
211 Ga0307515_10000356
212 Ga0307515_10032962
213 Ga0307515_10066568
214 Ga0307515_10132977
215 Ga0265332_10004883
216 Ga0307513_10097952
217 Ga0307408_100179160
218 Ga0307508_10005473
219 Ga0307508_10018177
220 Ga0307508_10041057
221 Ga0316576_10003751
222 Ga0307516_10001025
223 Ga0307516_10009115
224 Ga0307516_10029554
225 Ga0307516_10072157
226 Ga0307413_10046537
227 Ga0307406_10018755
228 Ga0307406_10030963
229 Ga0307406_10035503
230 Ga0307409_100001554
231 Ga0307415_100000113
232 Ga0307415_100010276
233 Ga0307415_100171746
234 Ga0395899_0018206
235 Ga0395900_0006298
236 Ga0395900_0312967
237 Ga0395898_0007314
238 Ga0395898_0010592
239 Ga0395901_0084636
240 Ga0436365_1622671
241 Ga0451577_0005384
242 Ga0466969_0011465
243 Ga0466966_0012037
244 Ga0453684_0069566
245 Ga0495594_0005648
246 Ga0495593_0062017
247 Ga0496106_0163732
248 Ga0496108_0000029
249 Ga0496108_0049904
250 Ga0496112_0015649
251 Ga0496112_0184176
252 Ga0496113_0055129
253 Ga0501034_0002365
254 Ga0501046_0053565
255 Ga0501072_0048712
256 Ga0501073_0136824
257 Ga0501077_0012165
258 Ga0501044_0336827
259 Ga0501045_0171266
260 nmdc:mga0qj67_25762_c1
261 nmdc:mga0qj67_2987_c1
262 nmdc:mga06r32_147369_c1
263 nmdc:mga06r32_2440_c1
264 Ga0500644_0012389
265 Ga0500646_0000454
266 Ga0500588_0004076
267 Ga0530510_0080565
268 2501942164
269 2515495083
270 2515719086
271 2516083292
272 2599734924
273 2623590870
274 2772644157
275 2831936345
276 2832010562
277 2855676380
278 2855681518
279 2855686752
280 2856864543
281 2857291896
282 2858855216
283 2858873350
284 2858888782
285 2858889055
286 2858897371
287 2858905814
288 2861521849
289 2866067016
290 2867303483
291 2867316160
292 2867321026
293 2867511722
294 2869052045
295 2869063770
296 2869073194
297 2880489631
298 2880496073
299 2902588039
300 2928175134
301 2929224747
302 2929232315
303 649813930
304 8020955817
305 8021121953
306 8039104086
307 8054707721
308 8054732834
309 8054738977
310 8057572300

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00743

FMO-like

Flavin-binding monooxygenase-like

67

477

0.92

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

72

130

0.9

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

144

279

0.86

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

71

288

0.78

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

68

284

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6nqu-assembly1.cif.gz_A human lsd1 in complex with gsk2879552 0.9759 31 66
5l3b-assembly1.cif.gz_A human lsd1/corest: lsd1 d556g mutation 0.9658 29 64
7vqt-assembly1.cif.gz_A crystal structure of lsd1 in complex with compound 5 0.9626 29 66
2h94-assembly1.cif.gz_A crystal structure and mechanism of human lysine-specific demethylase-1 0.961 29 66
8eeg-assembly1.cif.gz_A c. ammoniagenes monoamine oxidase (mao) bound to dopamine 0.9609 31 66
ID Description Score Start End Superfamily
af_C0VXV5_2_190_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9707 30 60 3.40.50.720
af_Q811X6_1_192_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9679 29 60 3.40.50.720
1yonA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9632 31 57 3.40.50.720
af_Q5U1B0_1_189_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9556 28 57 3.40.50.720
af_Q1MTR7_26_281_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9552 29 57 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A318E4N1-F1-model_v4 Flavin-binding monooxygenase-like protein 0.9665 30 461 GO:0004499
GO:0050660
GO:0050661
AF-A0A432RKV0-F1-model_v4 Monooxygenase 0.9638 28 463 GO:0004499
GO:0050660
GO:0050661
AF-A0A3D8N1T4-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9637 26 463 GO:0004499
GO:0050660
GO:0050661
AF-A0A318E4N1-F1-model_v4 Flavin-binding monooxygenase-like protein 0.9621 30 461 GO:0004499
GO:0050660
GO:0050661
AF-A0A6N6T460-F1-model_v4 Trimethylamine monooxygenase (EC 1.14.13.148) 0.9556 27 461 GO:0004499
GO:0050660
GO:0050661

Map