F221140

General Info

Members Datasets Scaffolds Average Seq Length
155 136 304 322

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10119377|rootH2_101193771
Length 363
Sequence VTRLILTADDSSAGALRRGGFADLVVPILHRFVWGPLLSDAELSAYLARRTGRQKRGHWLDFASRRDFMVAGGRSQSLLELVDLCDSVELWMDGRPNDQLVLIWLLDYLAHHVEIATKIVLRHVDAPLFDSPARLLAGRTIAGVQLAREHLDLGHLAWQAFRAPTPQAWFDLLKRDLSALPQLRRCVQELLDELPDAATGLGASQLRILELLSAGYQHPLDLLPHHRERFQRRVYDYWEGGTLLDDLALAPVPAVSGLDEWPFSVEMHDSRDSLERYKASTLSLTPLGKAILAGEEDFSSHNPIRRWWGGTQLTNANLWRWHAVLIAPDSDTPHGIECREEFDEPWRPIDWSMREAAYSAACA

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
19 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
23 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
24 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
25 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
26 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
27 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
28 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
32 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
34 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
35 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
37 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
40 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
41 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
42 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
43 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
48 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
49 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
50 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
51 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
54 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
55 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
56 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
59 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
60 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
61 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
62 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
63 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
64 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
65 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
66 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
67 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
68 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
69 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
70 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
71 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
72 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
73 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
74 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
75 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
76 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
77 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
78 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
79 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
80 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
81 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
82 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
83 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
84 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
85 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
86 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
87 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
88 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
89 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
90 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
91 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
92 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
93 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
94 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
95 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
96 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
97 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
98 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
99 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
100 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
101 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
102 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
103 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
104 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
105 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
106 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
107 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
108 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
109 2922425934
110 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
111 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
112 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
113 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
114 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
115 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
116 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
117 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
118 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
119 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
120 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
121 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
122 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
123 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
124 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
125 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
126 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
127 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
128 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
129 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
130 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
131 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
132 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
133 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
134 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
135 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
136 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 64.29
Metatranscriptomes 0
Isolates 35.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 29.03
Nodule 33.55
Rhizoplane 0.65
Rhizosphere 18.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10119377 3300003320 Bacteria 1303
2 JGI25165J46597_1004045 3300003214 Bacteria 3311
3 JGI25153J46596_10005745 3300003215 Bacteria 6465
4 rootH1_10117095 3300003316 Bacteria 1302
5 rootH2_10055805 3300003320 Bacteria 2053
6 rootL2_10131002 3300003322 Bacteria 1560
7 rootL2_10330961 3300003322 Bacteria 1296
8 JGI25160J50197_1026814 3300003354 Bacteria 1580
9 Ga0055542_1003246 3300003762 Bacteria 4541
10 Ga0055526_1017400 3300003771 Bacteria 2748
11 Ga0055524_1033706 3300003775 Bacteria 1428
12 Ga0055531_10001716 3300003794 Bacteria 15700
13 Ga0055531_10008354 3300003794 Bacteria 5477
14 Ga0055543_1002758 3300004625 Bacteria 5577
15 Ga0065165_1000626 3300005262 Bacteria 51320
16 Ga0065165_1018101 3300005262 Bacteria 2566
17 Ga0070714_100025870 3300005435 Bacteria 4847
18 Ga0070713_100016454 3300005436 Bacteria 5560
19 Ga0070706_100232274 3300005467 Bacteria 1722
20 Ga0070717_10035618 3300006028 Bacteria 4031
21 Ga0075365_10029799 3300006038 Bacteria 3490
22 Ga0099824_1002235 3300006942 Bacteria 28253
23 Ga0099824_1004477 3300006942 Bacteria 20117
24 Ga0105241_10089446 3300009174 Bacteria 2426
25 Ga0105237_10280739 3300009545 Bacteria 1668
26 Ga0105239_10068878 3300010375 Bacteria 3889
27 Ga0214544_1000020 3300021320 Bacteria 178560
28 Ga0214542_1000024 3300021321 Bacteria 191218
29 Ga0214545_1000011 3300021324 Bacteria 190550
30 Ga0214543_1000033 3300021327 Bacteria 190419
31 Ga0213872_10053059 3300021361 Bacteria 1839
32 Ga0213871_10003222 3300021441 Bacteria 3118
33 Ga0209563_102451 3300025230 Bacteria 4193
34 Ga0209677_101183 3300025253 Bacteria 11970
35 Ga0209677_101763 3300025253 Bacteria 8965
36 Ga0209148_1000673 3300025254 Bacteria 28884
37 Ga0209233_1003445 3300025261 Bacteria 5570
38 Ga0209455_1003809 3300025272 Bacteria 5177
39 Ga0209455_1006912 3300025272 Bacteria 3288
40 Ga0209564_1008963 3300025295 Bacteria 4845
41 Ga0209758_1000484 3300025297 Bacteria 65301
42 Ga0209256_1026382 3300025299 Bacteria 1674
43 Ga0207426_1012910 3300025302 Bacteria 3119
44 Ga0207426_1033681 3300025302 Bacteria 1649
45 Ga0209257_1001136 3300025304 Bacteria 34058
46 Ga0209257_1037708 3300025304 Bacteria 1471
47 Ga0207654_10064505 3300025911 Bacteria 2153
48 Ga0209389_1000127 3300027296 Bacteria 67209
49 Ga0209589_1000018 3300027357 Bacteria 192614
50 Ga0209589_1000243 3300027357 Bacteria 67209
51 Ga0209489_100026 3300027361 Bacteria 192614
52 Ga0209489_102084 3300027361 Bacteria 41097
53 Ga0209700_100035 3300027363 Bacteria 192614
54 Ga0265336_10000106 3300028666 Bacteria 63839
55 Ga0265338_10000065 3300028800 Bacteria 188966
56 Ga0265324_10002676 3300029957 Bacteria 8890
57 Ga0265314_10165652 3300031711 Bacteria 1340
58 Ga0373931_0106156 3300035691 Bacteria 1587
59 Ga0373927_0090767 3300035695 Bacteria 1984
60 Ga0373947_0020197 3300035725 Bacteria 3845
61 Ga0395898_0352835 3300037466 Bacteria 1403
62 Ga0395905_0075359 3300037471 Bacteria 3162
63 Ga0436365_1089528 3300039437 Bacteria 1438
64 Ga0436361_1173130 3300039447 Bacteria 2690
65 Ga0451853_1465587 3300041512 Bacteria 1293
66 Ga0466972_0000376 3300044658 Bacteria 23950
67 Ga0466972_0012548 3300044658 Bacteria 4257
68 Ga0466968_0039131 3300044735 Bacteria 1995
69 Ga0466960_0027514 3300044901 Bacteria 2594
70 Ga0495606_0039703 3300046507 Bacteria 3168
71 Ga0495648_0077033 3300046524 Bacteria 1913
72 Ga0495668_0136668 3300046616 Bacteria 1342
73 Ga0495604_0030189 3300047317 Bacteria 4308
74 Ga0496112_0128717 3300048915 Bacteria 2502
75 Ga0496117_0070585 3300048920 Bacteria 2345
76 Ga0496118_0011822 3300048921 Bacteria 8470
77 Ga0496121_0015129 3300048924 Bacteria 8117
78 Ga0496121_0084181 3300048924 Bacteria 2508
79 Ga0496126_0033058 3300048929 Bacteria 4868
80 nmdc:mga0yw44_229625_c1 3300050492 Bacteria 1231
81 nmdc:mga0sz30_17231_c1 3300050516 Bacteria 2879
82 Ga0500651_0072691 3300053093 Bacteria 2138
83 Ga0500566_0000120 3300053094 Bacteria 40616
84 Ga0500556_0076215 3300053104 Bacteria 1260
85 Ga0500562_028620 3300053108 Bacteria 1465
86 Ga0500572_000178 3300053111 Bacteria 22343
87 Ga0500642_0000228 3300053130 Bacteria 22034
88 Ga0500655_023737 3300053133 Bacteria 1159
89 Ga0500559_0002150 3300053136 Bacteria 10482
90 Ga0500604_0020943 3300053151 Bacteria 1845
91 Ga0500622_0028106 3300053156 Bacteria 2961
92 Ga0500639_034919 3300053163 Bacteria 2656
93 Ga0500576_017281 3300053725 Bacteria 3277
94 Ga0500596_002149 3300053735 Bacteria 3910
95 Ga0500599_000807 3300053736 Bacteria 3458
96 Ga0500601_000163 3300053737 Bacteria 13911
97 2507510122 2507262055 Bacteria 8048963
98 2513643839 2513237094 Bacteria 8789602
99 2514012681 2513237161 Bacteria 8871253
100 2617379047 2617270741 Bacteria 8201522
101 2617379048 2617270741 Bacteria 8201522
102 2818241687 2816332527 Bacteria 8933356
103 2824674444 2824671348 Bacteria 8369588
104 2824683335 2824679649 Bacteria 8248951
105 2824692380 2824687955 Bacteria 8360029
106 2824738313 2824732956 Bacteria 7810675
107 2838127429 2838122688 Bacteria 8803140
108 2841941618 2841941048 Bacteria 8688029
109 2841952365 2841949485 Bacteria 8680857
110 2841959386 2841957949 Bacteria 8652217
111 2841967763 2841966195 Bacteria 8673214
112 2841986390 2841983080 Bacteria 8395090
113 2844317645 2844315083 Bacteria 8138177
114 2844317646 2844315083 Bacteria 8138177
115 2874636140 2874628541 Bacteria 8630250
116 2879089626 2879083081 Bacteria 8587928
117 2881670710 2881665667 Bacteria 8175609
118 2888388335 2888388044 Bacteria 7304136
119 2903735327 2903727486 Bacteria 8281579
120 2904693412 2904690495 Bacteria 9412302
121 2906608754 2906602504 Bacteria 8295279
122 2906608755 2906602504 Bacteria 8295279
123 2908761929 2908756301 Bacteria 8864324
124 2922394885 2922393267 Bacteria 8285685
125 2922428495
126 2929616334 2929615660 Bacteria 9193770
127 2932804883 2932801729 Bacteria 7987968
128 2935648404 2935648319 Bacteria 8801166
129 2935657608 2935656913 Bacteria 8965014
130 2935771394 2935769743 Bacteria 7878163
131 2935779083 2935777560 Bacteria 8077691
132 2935788287 2935785616 Bacteria 7962367
133 2935796948 2935793552 Bacteria 8012592
134 2935884881 2935883170 Bacteria 7964738
135 2936011314 2936011229 Bacteria 8801034
136 2936019909 2936019824 Bacteria 8804134
137 2936028505 2936028420 Bacteria 8965941
138 2936046632 2936046547 Bacteria 8903709
139 3005478620 3005474847 Bacteria 9259049
140 3005487844 3005483717 Bacteria 7877331
141 3005713403 3005710791 Bacteria 7622528
142 8016522997 8016522445 Bacteria 8156687
143 8016540737 8016539877 Bacteria 8155419
144 8016552505 8016548790 Bacteria 8155074
145 8016560886 8016557553 Bacteria 8154380
146 8016574818 8016566248 Bacteria 8158151
147 8016598757 8016595262 Bacteria 8149947
148 8016621480 8016613128 Bacteria 8794220
149 8016628478 8016622563 Bacteria 7999408
150 8019536177 8019530166 Bacteria 8155624
151 8019543292 8019538911 Bacteria 7872763
152 8019555561 8019547302 Bacteria 7996444
153 rootH2_10119377
154 JGI25165J46597_1004045
155 JGI25153J46596_10005745
156 rootH1_10117095
157 rootH2_10055805
158 rootL2_10131002
159 rootL2_10330961
160 JGI25160J50197_1026814
161 Ga0055542_1003246
162 Ga0055526_1017400
163 Ga0055524_1033706
164 Ga0055531_10001716
165 Ga0055531_10008354
166 Ga0055543_1002758
167 Ga0065165_1000626
168 Ga0065165_1018101
169 Ga0070714_100025870
170 Ga0070713_100016454
171 Ga0070706_100232274
172 Ga0070717_10035618
173 Ga0075365_10029799
174 Ga0099824_1002235
175 Ga0099824_1004477
176 Ga0105241_10089446
177 Ga0105237_10280739
178 Ga0105239_10068878
179 Ga0214544_1000020
180 Ga0214542_1000024
181 Ga0214545_1000011
182 Ga0214543_1000033
183 Ga0213872_10053059
184 Ga0213871_10003222
185 Ga0209563_102451
186 Ga0209677_101183
187 Ga0209677_101763
188 Ga0209148_1000673
189 Ga0209233_1003445
190 Ga0209455_1003809
191 Ga0209455_1006912
192 Ga0209564_1008963
193 Ga0209758_1000484
194 Ga0209256_1026382
195 Ga0207426_1012910
196 Ga0207426_1033681
197 Ga0209257_1001136
198 Ga0209257_1037708
199 Ga0207654_10064505
200 Ga0209389_1000127
201 Ga0209589_1000018
202 Ga0209589_1000243
203 Ga0209489_100026
204 Ga0209489_102084
205 Ga0209700_100035
206 Ga0265336_10000106
207 Ga0265338_10000065
208 Ga0265324_10002676
209 Ga0265314_10165652
210 Ga0373931_0106156
211 Ga0373927_0090767
212 Ga0373947_0020197
213 Ga0395898_0352835
214 Ga0395905_0075359
215 Ga0436365_1089528
216 Ga0436361_1173130
217 Ga0451853_1465587
218 Ga0466972_0000376
219 Ga0466972_0012548
220 Ga0466968_0039131
221 Ga0466960_0027514
222 Ga0495606_0039703
223 Ga0495648_0077033
224 Ga0495668_0136668
225 Ga0495604_0030189
226 Ga0496112_0128717
227 Ga0496117_0070585
228 Ga0496118_0011822
229 Ga0496121_0015129
230 Ga0496121_0084181
231 Ga0496126_0033058
232 nmdc:mga0yw44_229625_c1
233 nmdc:mga0sz30_17231_c1
234 Ga0500651_0072691
235 Ga0500566_0000120
236 Ga0500556_0076215
237 Ga0500562_028620
238 Ga0500572_000178
239 Ga0500642_0000228
240 Ga0500655_023737
241 Ga0500559_0002150
242 Ga0500604_0020943
243 Ga0500622_0028106
244 Ga0500639_034919
245 Ga0500576_017281
246 Ga0500596_002149
247 Ga0500599_000807
248 Ga0500601_000163
249 2507510122
250 2513643839
251 2514012681
252 2617379047
253 2617379048
254 2818241687
255 2824674444
256 2824683335
257 2824692380
258 2824738313
259 2838127429
260 2841941618
261 2841952365
262 2841959386
263 2841967763
264 2841986390
265 2844317645
266 2844317646
267 2874636140
268 2879089626
269 2881670710
270 2888388335
271 2903735327
272 2904693412
273 2906608754
274 2906608755
275 2908761929
276 2922394885
277 2922428495
278 2929616334
279 2932804883
280 2935648404
281 2935657608
282 2935771394
283 2935779083
284 2935788287
285 2935796948
286 2935884881
287 2936011314
288 2936019909
289 2936028505
290 2936046632
291 3005478620
292 3005487844
293 3005713403
294 8016522997
295 8016540737
296 8016552505
297 8016560886
298 8016574818
299 8016598757
300 8016621480
301 8016628478
302 8019536177
303 8019543292
304 8019555561

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x7z-assembly1.cif.gz_A-2 crystal structure of mycobacterium tuberculosis marr family protein rv2887 complex with p-aminosalicylic acid 0.796 203 288
5x80-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis marr family protein rv2887 complex with salicylic acid 0.7805 203 288
3e6m-assembly4.cif.gz_H the crystal structure of a marr family transcriptional regulator from silicibacter pomeroyi dss. 0.7522 205 286
2hr3-assembly1.cif.gz_A crystal structure of putative transcriptional regulator protein from pseudomonas aeruginosa pa01 at 2.4 a resolution 0.7466 206 288
3bj6-assembly1.cif.gz_B crystal structure of marr family transcription regulator sp03579 0.7402 202 288
ID Description Score Start End Superfamily
af_P9WME9_3_138_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7326 203 288 1.10.10.10
4wcgB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7321 206 278 1.10.10.10
2f2eB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 207 286 1.10.10.10
4g9yA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7263 204 288 1.10.10.10
5bmzA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7145 203 287 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7Y9RGV3-F1-model_v4 DUF1835 domain-containing protein 0.9764 1 324
AF-A0A1G7PJ17-F1-model_v4 DUF1835 domain-containing protein 0.9663 1 252
AF-A0A7W6TZS0-F1-model_v4 Uncharacterized protein 0.9547 104 324
AF-A0A1G8HDA4-F1-model_v4 Uncharacterized protein 0.9515 137 218
AF-A0A6P1BLH7-F1-model_v4 Uncharacterized protein 0.9499 1 205

Map