F220020

General Info

Members Datasets Scaffolds Average Seq Length
154 39 154 538

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10017912|Ga0316576_100179124
Length 536
Sequence MAANGTDHAEYKSYLEEDGGRKGIFRWILSTDHKRIALLYLYSMMAWFIIGVTLGVLMKLELIAPGKTLIGPQAYNATFTVHGVIMIFLIVIPGLPAVFGNFMLPIQIGAKDVAFPRLNLFSWYIYVIGSILVIMSLFGNGAPDTGWTFYAPYSFKTGTNMLPAALGAFVLGFSSILTGLNFLVTIHRMRAPGMTWMKMPLFPWTIYGTAWIQLLATPIVGITLLMVAGERILGIGFFDPAKGGDPLLYQHLFWIYSHPAVYIMILPAMGAISEIIPTFTRKTIFGYRAIVLSTLAIAFVGYFVWGHHMFTAGMSGTALFTFSILTFLVAIPSAIKVFNWIATMHQGSISTEVPFLWAASFIFVFLIGGLTGLVLGALATNVHVHDTAFVVGHFHFIVFGGTGFAFFGALHYWFPKIYGRMYDKGWARTGWMIFFIGFIALYGPMFYLGITGMPRRYFDYLEEYHGPNIISSLGALVMVTGFVIILINLVRSAREGEKAPMNPWGGTNLEWQIPSPPPLENFEEIPVIEKATYKFD

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
6 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
7 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
8 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
9 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
10 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
11 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
12 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
13 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
14 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
15 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
16 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
17 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
18 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
19 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
20 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
21 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
22 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
23 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
24 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
25 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
26 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
27 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
28 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
31 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
32 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
33 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
34 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
35 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
36 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
37 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
38 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
39 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.7
Metatranscriptomes 1.3
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.05
Stem 0
Stem Tuber 0
Unclassified 1.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10005233 3300005293 Bacteria 4410
2 Ga0070670_100005872 3300005331 Bacteria 10374
3 Ga0070675_100050798 3300005354 Bacteria 3405
4 Ga0070688_100018556 3300005365 Bacteria 4016
5 Ga0068859_100037376 3300005617 Bacteria 4873
6 Ga0097620_100037372 3300006931 Bacteria 4873
7 Ga0207650_10021878 3300025925 Bacteria 4524
8 Ga0207689_10059500 3300025942 Bacteria 3142
9 Ga0207674_10008697 3300026116 Bacteria 11688
10 Ga0265318_10001726 3300028577 Bacteria 12512
11 Ga0265323_10000817 3300028653 Bacteria 16711
12 Ga0265323_10012384 3300028653 Bacteria 3418
13 Ga0265322_10002637 3300028654 Bacteria 5503
14 Ga0265336_10026539 3300028666 Bacteria 1820
15 Ga0265338_10001526 3300028800 Bacteria 37353
16 Ga0265338_10003724 3300028800 Bacteria 21208
17 Ga0265338_10021172 3300028800 Bacteria 6794
18 Ga0265338_10083544 3300028800 Bacteria 2671
19 Ga0265330_10000646 3300031235 Bacteria 22403
20 Ga0265330_10016923 3300031235 Bacteria 3361
21 Ga0265332_10002769 3300031238 Bacteria 8729
22 Ga0265320_10010203 3300031240 Bacteria 5609
23 Ga0265329_10000784 3300031242 Bacteria 16125
24 Ga0265340_10000608 3300031247 Bacteria 20005
25 Ga0265339_10009811 3300031249 Bacteria 5983
26 Ga0265331_10009018 3300031250 Bacteria 5635
27 Ga0265327_10000811 3300031251 Bacteria 47322
28 Ga0265327_10003801 3300031251 Bacteria 13976
29 Ga0265327_10015037 3300031251 Bacteria 5027
30 Ga0265316_10002417 3300031344 Bacteria 19422
31 Ga0265316_10008011 3300031344 Bacteria 9864
32 Ga0265316_10072203 3300031344 Bacteria 2659
33 Ga0265316_10087987 3300031344 Bacteria 2372
34 Ga0265314_10008681 3300031711 Bacteria 8690
35 Ga0265342_10000944 3300031712 Bacteria 28933
36 Ga0316576_10017912 3300031727 Bacteria 4825
37 Ga0316576_10059564 3300031727 Bacteria 2796
38 Ga0316576_10065209 3300031727 Bacteria 2676
39 Ga0316578_10004864 3300031728 Bacteria 6419
40 Ga0316578_10005263 3300031728 Bacteria 6249
41 Ga0316578_10018797 3300031728 Bacteria 3794
42 Ga0316593_10018126 3300032168 Bacteria 2158
43 Ga0316592_1006792 3300033524 Bacteria 2216
44 Ga0316582_0005854 3300036647 Bacteria 6390
45 Ga0316584_0008806 3300036712 Bacteria 6972
46 Ga0316584_0063834 3300036712 Bacteria 2757
47 Ga0400484_29996 3300038725 Unclassified 1711
48 Ga0400483_085096 3300039062 Bacteria 22135
49 Ga0400489_88695 3300039093 Unclassified 2127
50 Ga0451577_0000015 3300042876 Bacteria 538333
51 Ga0451577_0000047 3300042876 Bacteria 312768
52 Ga0451577_0000392 3300042876 Bacteria 80426
53 Ga0451577_0000651 3300042876 Bacteria 55020
54 Ga0451577_0000802 3300042876 Bacteria 47263
55 Ga0451577_0003348 3300042876 Bacteria 17948
56 Ga0451577_0006544 3300042876 Bacteria 11590
57 Ga0451577_0009226 3300042876 Bacteria 9513
58 Ga0451577_0011758 3300042876 Bacteria 8262
59 Ga0451577_0012654 3300042876 Bacteria 7917
60 Ga0451577_0027838 3300042876 Bacteria 5115
61 Ga0451577_0034857 3300042876 Bacteria 4535
62 Ga0451577_0065858 3300042876 Bacteria 3231
63 Ga0451577_0159351 3300042876 Bacteria 2032
64 Ga0453683_0000001 3300044673 Bacteria 1384965
65 Ga0453683_0000009 3300044673 Bacteria 491115
66 Ga0453683_0000015 3300044673 Bacteria 346024
67 Ga0453683_0000370 3300044673 Bacteria 53913
68 Ga0453683_0000518 3300044673 Bacteria 43456
69 Ga0453683_0000585 3300044673 Bacteria 40404
70 Ga0453683_0000696 3300044673 Bacteria 35148
71 Ga0453683_0000786 3300044673 Bacteria 31394
72 Ga0453683_0001058 3300044673 Bacteria 25581
73 Ga0453683_0002988 3300044673 Bacteria 12674
74 Ga0453683_0004519 3300044673 Bacteria 9851
75 Ga0453683_0004706 3300044673 Bacteria 9635
76 Ga0453683_0014172 3300044673 Bacteria 5182
77 Ga0453683_0035161 3300044673 Bacteria 3158
78 Ga0453683_0036138 3300044673 Bacteria 3110
79 Ga0453683_0049746 3300044673 Bacteria 2627
80 Ga0453683_0056347 3300044673 Bacteria 2459
81 Ga0453683_0058945 3300044673 Bacteria 2401
82 Ga0453684_0000004 3300044712 Bacteria 1469893
83 Ga0453684_0000155 3300044712 Bacteria 305046
84 Ga0453684_0000382 3300044712 Bacteria 181519
85 Ga0453684_0000388 3300044712 Bacteria 180685
86 Ga0453684_0000474 3300044712 Bacteria 159252
87 Ga0453684_0000477 3300044712 Bacteria 158917
88 Ga0453684_0000648 3300044712 Bacteria 125276
89 Ga0453684_0000708 3300044712 Bacteria 118229
90 Ga0453684_0000932 3300044712 Bacteria 96735
91 Ga0453684_0001085 3300044712 Bacteria 86493
92 Ga0453684_0001433 3300044712 Bacteria 68182
93 Ga0453684_0001733 3300044712 Bacteria 58391
94 Ga0453684_0002404 3300044712 Bacteria 45631
95 Ga0453684_0003330 3300044712 Bacteria 36457
96 Ga0453684_0003665 3300044712 Bacteria 34087
97 Ga0453684_0003925 3300044712 Bacteria 32662
98 Ga0453684_0005320 3300044712 Bacteria 25644
99 Ga0453684_0005377 3300044712 Bacteria 25452
100 Ga0453684_0008765 3300044712 Bacteria 17958
101 Ga0453684_0009158 3300044712 Bacteria 17416
102 Ga0453684_0010734 3300044712 Bacteria 15561
103 Ga0453684_0012669 3300044712 Bacteria 13856
104 Ga0453684_0015893 3300044712 Bacteria 11836
105 Ga0453684_0016396 3300044712 Bacteria 11588
106 Ga0453684_0016942 3300044712 Bacteria 11330
107 Ga0453684_0018947 3300044712 Bacteria 10518
108 Ga0453684_0019061 3300044712 Bacteria 10473
109 Ga0453684_0022010 3300044712 Bacteria 9483
110 Ga0453684_0028827 3300044712 Bacteria 7903
111 Ga0453684_0032134 3300044712 Bacteria 7355
112 Ga0453684_0041806 3300044712 Bacteria 6190
113 Ga0453684_0041915 3300044712 Bacteria 6180
114 Ga0453684_0049636 3300044712 Bacteria 5530
115 Ga0453684_0057302 3300044712 Bacteria 5044
116 Ga0453684_0061227 3300044712 Bacteria 4834
117 Ga0453684_0062057 3300044712 Bacteria 4791
118 Ga0453684_0066347 3300044712 Bacteria 4596
119 Ga0453684_0075465 3300044712 Bacteria 4237
120 Ga0453684_0076964 3300044712 Bacteria 4186
121 Ga0453684_0083402 3300044712 Bacteria 3978
122 Ga0453684_0085333 3300044712 Unclassified 3923
123 Ga0453684_0088943 3300044712 Bacteria 3822
124 Ga0453684_0097067 3300044712 Unclassified 3618
125 Ga0453684_0104279 3300044712 Bacteria 3462
126 Ga0453684_0110367 3300044712 Bacteria 3343
127 Ga0453684_0131557 3300044712 Bacteria 3001
128 Ga0453684_0134580 3300044712 Bacteria 2961
129 Ga0453684_0150759 3300044712 Bacteria 2763
130 Ga0453684_0165702 3300044712 Unclassified 2609
131 Ga0453684_0232942 3300044712 Bacteria 2125
132 Ga0453684_0309556 3300044712 Bacteria 1793
133 Ga0453684_0329596 3300044712 Bacteria 1726
134 Ga0451576_0000049 3300045051 Bacteria 323945
135 Ga0451576_0000061 3300045051 Bacteria 284306
136 Ga0451576_0000339 3300045051 Bacteria 112422
137 Ga0451576_0000720 3300045051 Bacteria 66656
138 Ga0451576_0000886 3300045051 Bacteria 56888
139 Ga0451576_0001763 3300045051 Bacteria 35496
140 Ga0451576_0002344 3300045051 Bacteria 28561
141 Ga0451576_0003926 3300045051 Bacteria 19838
142 Ga0451576_0008101 3300045051 Bacteria 12386
143 Ga0451576_0009584 3300045051 Bacteria 11210
144 Ga0451576_0015600 3300045051 Bacteria 8411
145 Ga0451576_0020943 3300045051 Bacteria 7115
146 Ga0451576_0041602 3300045051 Bacteria 4857
147 Ga0451576_0045607 3300045051 Bacteria 4616
148 Ga0451576_0047504 3300045051 Bacteria 4512
149 Ga0451576_0051210 3300045051 Bacteria 4329
150 Ga0451576_0137138 3300045051 Bacteria 2552
151 Ga0451576_0157749 3300045051 Bacteria 2367
152 Ga0451576_0237715 3300045051 Bacteria 1903
153 Ga0451576_0241813 3300045051 Unclassified 1886
154 Ga0495613_0056462 3300046689 Bacteria 2883

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0309556 Ga0453684_0309556_32_1447 470
2 3300044712 Ga0453684_0097067 Ga0453684_0097067_2166_3590 474
3 3300044712 Ga0453684_0131557 Ga0453684_0131557_1151_2608 485
4 3300042876 Ga0451577_0065858 Ga0451577_0065858_199_1680 493
5 3300044712 Ga0453684_0005377 Ga0453684_0005377_2174_3655 493
6 3300038725 Ga0400484_29996 Ga0400484_29996_125_1633 499
7 3300042876 Ga0451577_0000015 Ga0451577_0000015_114533_116041 502
8 3300044712 Ga0453684_0000474 Ga0453684_0000474_43212_44720 502
9 3300045051 Ga0451576_0000061 Ga0451576_0000061_114533_116041 502
10 3300044712 Ga0453684_0165702 Ga0453684_0165702_370_1965 515
11 3300044673 Ga0453683_0000518 Ga0453683_0000518_6737_8350 518
12 3300044712 Ga0453684_0041915 Ga0453684_0041915_3556_5169 518
13 3300045051 Ga0451576_0015600 Ga0451576_0015600_5519_7132 518
14 3300031251 Ga0265327_10015037 Ga0265327_100150372 524
15 3300042876 Ga0451577_0009226 Ga0451577_0009226_4323_5957 524
16 3300044712 Ga0453684_0003665 Ga0453684_0003665_24033_25667 524
17 3300042876 Ga0451577_0000802 Ga0451577_0000802_31323_32933 526
18 3300044673 Ga0453683_0000015 Ga0453683_0000015_137114_138724 526
19 3300044712 Ga0453684_0000932 Ga0453684_0000932_80624_82234 526
20 3300045051 Ga0451576_0000339 Ga0451576_0000339_38683_40293 526
21 3300028653 Ga0265323_10000817 Ga0265323_100008178 531
22 3300028666 Ga0265336_10026539 Ga0265336_100265391 531
23 3300028800 Ga0265338_10083544 Ga0265338_100835443 531
24 3300031344 Ga0265316_10002417 Ga0265316_100024177 531
25 3300031344 Ga0265316_10008011 Ga0265316_100080112 531
26 3300044712 Ga0453684_0016942 Ga0453684_0016942_1108_2703 531
27 3300044712 Ga0453684_0019061 Ga0453684_0019061_6333_7928 531
28 3300044712 Ga0453684_0028827 Ga0453684_0028827_3174_4769 531
29 3300045051 Ga0451576_0237715 Ga0451576_0237715_110_1705 531
30 3300028800 Ga0265338_10001526 Ga0265338_1000152625 532
31 3300031251 Ga0265327_10000811 Ga0265327_1000081133 532
32 3300045051 Ga0451576_0241813 Ga0451576_0241813_193_1791 532
33 3300044712 Ga0453684_0061227 Ga0453684_0061227_2563_4164 533
34 3300044712 Ga0453684_0076964 Ga0453684_0076964_328_1938 534
35 3300044712 Ga0453684_0088943 Ga0453684_0088943_1561_3171 534
36 3300031727 Ga0316576_10059564 Ga0316576_100595642 535
37 3300033524 Ga0316592_1006792 Ga0316592_10067922 535
38 3300039093 Ga0400489_88695 Ga0400489_88695_166_1773 535
39 3300042876 Ga0451577_0000651 Ga0451577_0000651_39948_41561 535
40 3300044673 Ga0453683_0000370 Ga0453683_0000370_48599_50212 535
41 3300044673 Ga0453683_0056347 Ga0453683_0056347_801_2414 535
42 3300044712 Ga0453684_0000648 Ga0453684_0000648_83850_85463 535
43 3300044712 Ga0453684_0001433 Ga0453684_0001433_13460_15073 535
44 3300044712 Ga0453684_0001733 Ga0453684_0001733_7116_8729 535
45 3300044712 Ga0453684_0008765 Ga0453684_0008765_2262_3875 535
46 3300044712 Ga0453684_0012669 Ga0453684_0012669_3076_4689 535
47 3300044712 Ga0453684_0016396 Ga0453684_0016396_9211_10824 535
48 3300044712 Ga0453684_0329596 Ga0453684_0329596_73_1686 535
49 3300045051 Ga0451576_0000720 Ga0451576_0000720_13460_15073 535
50 3300045051 Ga0451576_0009584 Ga0451576_0009584_6359_7972 535
51 3300045051 Ga0451576_0041602 Ga0451576_0041602_1989_3602 535
52 3300028800 Ga0265338_10021172 Ga0265338_100211726 536
53 3300031727 Ga0316576_10017912 Ga0316576_100179124 536
54 3300031727 Ga0316576_10065209 Ga0316576_100652092 536
55 3300031728 Ga0316578_10005263 Ga0316578_100052633 536
56 3300036712 Ga0316584_0063834 Ga0316584_0063834_254_1864 536
57 3300042876 Ga0451577_0000392 Ga0451577_0000392_66183_67793 536
58 3300042876 Ga0451577_0012654 Ga0451577_0012654_3654_5264 536
59 3300044712 Ga0453684_0000155 Ga0453684_0000155_80555_82165 536
60 3300044712 Ga0453684_0003330 Ga0453684_0003330_33214_34824 536
61 3300044712 Ga0453684_0083402 Ga0453684_0083402_1081_2694 536
62 3300044712 Ga0453684_0232942 Ga0453684_0232942_333_1943 536
63 3300045051 Ga0451576_0002344 Ga0451576_0002344_10396_12006 536
64 3300031728 Ga0316578_10018797 Ga0316578_100187973 537
65 3300044673 Ga0453683_0002988 Ga0453683_0002988_1008_2621 537
66 3300031251 Ga0265327_10003801 Ga0265327_1000380110 538
67 3300039062 Ga0400483_085096 Ga0400483_085096_9604_11220 538
68 3300042876 Ga0451577_0003348 Ga0451577_0003348_6431_8047 538
69 3300044673 Ga0453683_0000001 Ga0453683_0000001_1300124_1301740 538
70 3300044673 Ga0453683_0000696 Ga0453683_0000696_28550_30166 538
71 3300044673 Ga0453683_0004706 Ga0453683_0004706_4179_5795 538
72 3300044712 Ga0453684_0005320 Ga0453684_0005320_9779_11395 538
73 3300045051 Ga0451576_0020943 Ga0451576_0020943_1359_2975 538
74 3300045051 Ga0451576_0051210 Ga0451576_0051210_134_1750 538
75 3300036712 Ga0316584_0008806 Ga0316584_0008806_2976_4595 539
76 3300042876 Ga0451577_0011758 Ga0451577_0011758_3841_5460 539
77 3300042876 Ga0451577_0027838 Ga0451577_0027838_1593_3215 539
78 3300044673 Ga0453683_0000009 Ga0453683_0000009_104062_105681 539
79 3300044673 Ga0453683_0035161 Ga0453683_0035161_441_2063 539
80 3300044712 Ga0453684_0000477 Ga0453684_0000477_70971_72590 539
81 3300044712 Ga0453684_0000708 Ga0453684_0000708_1824_3443 539
82 3300044712 Ga0453684_0003925 Ga0453684_0003925_7127_8749 539
83 3300045051 Ga0451576_0157749 Ga0451576_0157749_483_2102 539
84 3300031247 Ga0265340_10000608 Ga0265340_1000060815 540
85 3300042876 Ga0451577_0000047 Ga0451577_0000047_192844_194466 540
86 3300044673 Ga0453683_0000585 Ga0453683_0000585_24055_25677 540
87 3300044673 Ga0453683_0000786 Ga0453683_0000786_14033_15655 540
88 3300044673 Ga0453683_0001058 Ga0453683_0001058_68_1690 540
89 3300044673 Ga0453683_0058945 Ga0453683_0058945_566_2188 540
90 3300044712 Ga0453684_0000382 Ga0453684_0000382_118303_119925 540
91 3300044712 Ga0453684_0018947 Ga0453684_0018947_8540_10162 540
92 3300044712 Ga0453684_0104279 Ga0453684_0104279_756_2378 540
93 3300045051 Ga0451576_0000049 Ga0451576_0000049_52037_53659 540
94 3300042876 Ga0451577_0006544 Ga0451577_0006544_5910_7535 541
95 3300042876 Ga0451577_0159351 Ga0451577_0159351_43_1668 541
96 3300044673 Ga0453683_0004519 Ga0453683_0004519_2105_3730 541
97 3300044673 Ga0453683_0036138 Ga0453683_0036138_1351_2976 541
98 3300044712 Ga0453684_0000388 Ga0453684_0000388_102619_104244 541
99 3300044712 Ga0453684_0001085 Ga0453684_0001085_66221_67846 541
100 3300044712 Ga0453684_0009158 Ga0453684_0009158_12115_13740 541
101 3300044712 Ga0453684_0015893 Ga0453684_0015893_3016_4641 541
102 3300044712 Ga0453684_0032134 Ga0453684_0032134_4933_6558 541
103 3300044712 Ga0453684_0041806 Ga0453684_0041806_4202_5827 541
104 3300044712 Ga0453684_0049636 Ga0453684_0049636_1075_2706 541
105 3300044712 Ga0453684_0057302 Ga0453684_0057302_3193_4818 541
106 3300044712 Ga0453684_0062057 Ga0453684_0062057_1513_3144 541
107 3300044712 Ga0453684_0110367 Ga0453684_0110367_346_1971 541
108 3300044712 Ga0453684_0134580 Ga0453684_0134580_377_2002 541
109 3300045051 Ga0451576_0003926 Ga0451576_0003926_378_2003 541
110 3300045051 Ga0451576_0047504 Ga0451576_0047504_835_2460 541
111 3300045051 Ga0451576_0137138 Ga0451576_0137138_634_2265 541
112 3300031344 Ga0265316_10072203 Ga0265316_100722033 542
113 3300044712 Ga0453684_0150759 Ga0453684_0150759_946_2577 542
114 3300045051 Ga0451576_0000886 Ga0451576_0000886_38269_39897 542
115 3300031235 Ga0265330_10000646 Ga0265330_100006465 543
116 3300032168 Ga0316593_10018126 Ga0316593_100181261 543
117 3300036647 Ga0316582_0005854 Ga0316582_0005854_4091_5728 543
118 3300044673 Ga0453683_0049746 Ga0453683_0049746_677_2350 543
119 3300044712 Ga0453684_0022010 Ga0453684_0022010_3557_5188 543
120 3300044712 Ga0453684_0066347 Ga0453684_0066347_2730_4361 543
121 3300044712 Ga0453684_0085333 Ga0453684_0085333_901_2532 543
122 3300045051 Ga0451576_0001763 Ga0451576_0001763_19873_21546 543
123 3300028653 Ga0265323_10012384 Ga0265323_100123842 544
124 3300028654 Ga0265322_10002637 Ga0265322_100026372 544
125 3300028800 Ga0265338_10003724 Ga0265338_1000372415 544
126 3300031235 Ga0265330_10016923 Ga0265330_100169233 544
127 3300031242 Ga0265329_10000784 Ga0265329_100007843 544
128 3300031712 Ga0265342_10000944 Ga0265342_100009445 544
129 3300044673 Ga0453683_0014172 Ga0453683_0014172_2739_4373 544
130 3300044712 Ga0453684_0000004 Ga0453684_0000004_1216035_1217687 544
131 3300044712 Ga0453684_0010734 Ga0453684_0010734_12552_14186 544
132 3300044712 Ga0453684_0075465 Ga0453684_0075465_309_1943 544
133 3300045051 Ga0451576_0008101 Ga0451576_0008101_10302_11936 544
134 3300031728 Ga0316578_10004864 Ga0316578_100048644 546
135 3300042876 Ga0451577_0034857 Ga0451577_0034857_2857_4497 546
136 3300044712 Ga0453684_0002404 Ga0453684_0002404_24663_26303 546
137 3300028577 Ga0265318_10001726 Ga0265318_100017264 548
138 3300031238 Ga0265332_10002769 Ga0265332_100027694 548
139 3300031240 Ga0265320_10010203 Ga0265320_100102032 548
140 3300031249 Ga0265339_10009811 Ga0265339_100098114 548
141 3300031250 Ga0265331_10009018 Ga0265331_100090184 548
142 3300031344 Ga0265316_10087987 Ga0265316_100879872 548
143 3300031711 Ga0265314_10008681 Ga0265314_100086816 548
144 3300045051 Ga0451576_0045607 Ga0451576_0045607_1446_3110 554
145 3300005293 Ga0065715_10005233 Ga0065715_100052334 555
146 3300005331 Ga0070670_100005872 Ga0070670_1000058723 555
147 3300005354 Ga0070675_100050798 Ga0070675_1000507982 555
148 3300005365 Ga0070688_100018556 Ga0070688_1000185562 555
149 3300005617 Ga0068859_100037376 Ga0068859_1000373764 555
150 3300006931 Ga0097620_100037372 Ga0097620_1000373723 555
151 3300025925 Ga0207650_10021878 Ga0207650_100218782 555
152 3300025942 Ga0207689_10059500 Ga0207689_100595002 555
153 3300026116 Ga0207674_10008697 Ga0207674_100086973 555
154 3300046689 Ga0495613_0056462 Ga0495613_0056462_194_1861 555

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

35

477

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6pw1-assembly2.cif.gz_C cytochrome c oxidase delta 16 0.9656 36 533
3omi-assembly2.cif.gz_C catalytic core subunits (i and ii) of cytochrome c oxidase from rhodobacter sphaeroides with d132a mutation 0.9634 37 531
1m57-assembly2.cif.gz_G structure of cytochrome c oxidase from rhodobacter sphaeroides (eq(i-286) mutant)) 0.9626 32 539
3oma-assembly2.cif.gz_C catalytic core subunits (i and ii) of cytochrome c oxidase from rhodobacter sphaeroides with k362m mutation 0.9616 37 531
3ehb-assembly1.cif.gz_A a d-pathway mutation decouples the paracoccus denitrificans cytochrome c oxidase by altering the side chain orientation of a distant, conserved glutamate 0.9606 33 532
ID Description Score Start End Superfamily
af_Q7HP04_41_512_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9554 34 495 1.20.210.10
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9548 37 542 1.20.210.10
af_O21042_10_509_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.954 36 502 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9462 36 550 1.20.210.10
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9448 28 546 1.20.210.10
ID Description Score Start End GO Terms
AF-A0A7V4EMR8-F1-model_v4 Cytochrome c oxidase subunit I 0.9758 399 547 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A2V9B403-F1-model_v4 Cytochrome c oxidase subunit I 0.9678 198 547 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A0S4KRC6-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9675 354 503 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A534X4H9-F1-model_v4 Cytochrome c oxidase subunit I 0.9663 337 548 GO:0004129
GO:0009060
GO:0015990
GO:0016020
GO:0020037
GO:0022904
AF-A0A1Q3KRF1-F1-model_v4 deleted 0.9662 31 539

Feature Viewer

pLDDT pTM Quality
83.53 0.87 High
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Predicted Structure (AlphaFold2)

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