F219863

General Info

Members Datasets Scaffolds Average Seq Length
154 131 308 415

Family's Representative Sequence

Representative Sequence 3300026088|Ga0207641_10159803|Ga0207641_101598031
Length 488
Sequence VNILYVSQYFPPEMGAPAARASELSSHWARAGHRVTVLTGFPNHPTGIIAPGYRVPFCRIIYRESFHGVNVLRTWLLPFPNRKAWERMLNYSSFCLSSALAGLRISAPDVVVGSSPQLLVALSACWLARAKRVPFIFEVRDLWPESLTAVGVGGDNSFLHRSLKKIASFLYRQADQIVVVTPAFKQHIAAAYNIPSSKISLIPNGVEAAHFSPDQVDESLRNRLGIESKFTICYIGTMGMAHGLESLVEAARFLHASHPEIVFLLVGEGAEKQRLIAHSGSLGLKNIRFIDQQPRAVIPHYINASDAALVLLKKSDIFKTVIPTKMLEFMSCARPLMVGVEGEAKKLVEEAQAGLCFEPGNPEALVQAILKLAAEPSLRQAYGRNGRRFIIEHLIEPLRLEDAADVAHLSASAFSRFFRRATGKSFVRYVNELRVARACRLLTETEHSITSIAFESGFGNLANFNRRFREIKQLRPREFRSHFTQGNA

Samples

Sample ID Description Type Environment
1 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
4 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
96 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
112 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
127 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
128 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
129 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
130 2597490337 Halobacterium salinarum DSM 3754 Isolate Nodule
131 2738541284 Pedobacter sp. YR016 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.05
Metatranscriptomes 0.65
Isolates 1.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.9
Nodule 0.65
Rhizoplane 1.3
Rhizosphere 90.26
Stem 0
Stem Tuber 0
Unclassified 13.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207641_10159803 3300026088 Unclassified 2048
2 SwRhRL2b_contig_1663050 2162886007 Bacteria 482194
3 LJNas_1000055 3300000546 Bacteria 15337
4 JGI24743J22301_10002029 3300001991 Bacteria 2968
5 JGI25162J39368_1000204 3300002737 Bacteria 62620
6 JGI25164J39214_1000944 3300002772 Bacteria 9402
7 JGI25165J46597_1000753 3300003214 Bacteria 24891
8 rootL2_10329522 3300003322 Bacteria 3107
9 rootH1_10367482 3300003323 Bacteria 1671
10 Ga0065714_10002854 3300005288 Bacteria 10156
11 Ga0065704_10070140 3300005289 Bacteria 482257
12 Ga0070670_100150744 3300005331 Bacteria 2012
13 Ga0070680_100013709 3300005336 Bacteria 6321
14 Ga0070680_100129209 3300005336 Bacteria 2113
15 Ga0070689_100004910 3300005340 Bacteria 9073
16 Ga0070675_100015531 3300005354 Bacteria 6022
17 Ga0070674_100016320 3300005356 Bacteria 4654
18 Ga0070674_100020742 3300005356 Bacteria 4206
19 Ga0070709_10005051 3300005434 Bacteria 7134
20 Ga0070710_10013029 3300005437 Unclassified 4148
21 Ga0070701_10015069 3300005438 Bacteria 3560
22 Ga0070708_100017885 3300005445 Bacteria 5923
23 Ga0070708_100071860 3300005445 Bacteria 3116
24 Ga0070678_100020375 3300005456 Bacteria 4350
25 Ga0070662_100080966 3300005457 Bacteria 2418
26 Ga0070681_10147991 3300005458 Unclassified 2276
27 Ga0068867_100159255 3300005459 Bacteria 1779
28 Ga0070679_100024496 3300005530 Bacteria 5913
29 Ga0070679_100088144 3300005530 Bacteria 3090
30 Ga0070697_100085006 3300005536 Unclassified 2610
31 Ga0070695_100005669 3300005545 Bacteria 7359
32 Ga0070696_100116936 3300005546 Bacteria 1926
33 Ga0070665_100022202 3300005548 Bacteria 6384
34 Ga0068855_100018972 3300005563 Bacteria 8269
35 Ga0068864_100039464 3300005618 Unclassified 4036
36 Ga0068863_100027828 3300005841 Bacteria 5396
37 Ga0068863_100060500 3300005841 Bacteria 3582
38 Ga0070715_10004043 3300006163 Unclassified 4759
39 Ga0070716_100000114 3300006173 Bacteria 31714
40 Ga0070712_100005030 3300006175 Bacteria 8187
41 Ga0070712_100035993 3300006175 Bacteria 3365
42 Ga0075428_100034819 3300006844 Bacteria 5553
43 Ga0075434_100000564 3300006871 Bacteria 28515
44 Ga0075434_100007340 3300006871 Bacteria 10202
45 Ga0075434_100208341 3300006871 Bacteria 1976
46 Ga0075435_100017380 3300007076 Bacteria 5444
47 Ga0075435_100066637 3300007076 Bacteria 2930
48 Ga0075435_100229795 3300007076 Bacteria 1576
49 Ga0099795_10002828 3300007788 Bacteria 4187
50 Ga0105240_10118571 3300009093 Bacteria 3189
51 Ga0105245_10135456 3300009098 Unclassified 2314
52 Ga0105248_10085289 3300009177 Bacteria 3554
53 Ga0105237_10134726 3300009545 Unclassified 2465
54 Ga0105249_10246306 3300009553 Unclassified 1769
55 Ga0105239_10000415 3300010375 Bacteria 62156
56 Ga0157371_10015842 3300013102 Bacteria 5640
57 Ga0157370_10095754 3300013104 Bacteria 2785
58 Ga0157374_10020777 3300013296 Bacteria 5830
59 Ga0163162_10134231 3300013306 Unclassified 2586
60 Ga0157372_10033108 3300013307 Bacteria 5674
61 Ga0157372_10241330 3300013307 Unclassified 2097
62 Ga0163163_10011131 3300014325 Bacteria 8145
63 Ga0157380_10172861 3300014326 Bacteria 1890
64 Ga0163161_10001159 3300017792 Bacteria 19850
65 Ga0213874_10010316 3300021377 Bacteria 2336
66 Ga0213876_10051905 3300021384 Bacteria 2167
67 Ga0207427_100223 3300025231 Bacteria 48426
68 Ga0209437_100164 3300025233 Bacteria 145317
69 Ga0209233_1000242 3300025261 Bacteria 90301
70 Ga0207697_10034583 3300025315 Bacteria 2068
71 Ga0207692_10006624 3300025898 Bacteria 4706
72 Ga0207692_10007735 3300025898 Unclassified 4416
73 Ga0207685_10002378 3300025905 Unclassified 4294
74 Ga0207699_10005445 3300025906 Bacteria 6098
75 Ga0207645_10000173 3300025907 Bacteria 51615
76 Ga0207643_10001851 3300025908 Bacteria 11693
77 Ga0207707_10088590 3300025912 Bacteria 2704
78 Ga0207693_10021306 3300025915 Bacteria 5151
79 Ga0207663_10001242 3300025916 Bacteria 11779
80 Ga0207660_10036060 3300025917 Unclassified 3437
81 Ga0207660_10118626 3300025917 Bacteria 2001
82 Ga0207657_10000361 3300025919 Bacteria 48111
83 Ga0207649_10002818 3300025920 Bacteria 9583
84 Ga0207650_10000024 3300025925 Bacteria 299184
85 Ga0207687_10050339 3300025927 Bacteria 2899
86 Ga0207644_10014422 3300025931 Bacteria 5286
87 Ga0207706_10000216 3300025933 Bacteria 63452
88 Ga0207670_10003894 3300025936 Bacteria 7963
89 Ga0207670_10048431 3300025936 Bacteria 2836
90 Ga0207665_10000040 3300025939 Bacteria 84223
91 Ga0207691_10000072 3300025940 Bacteria 83580
92 Ga0207711_10042040 3300025941 Bacteria 3893
93 Ga0207689_10000160 3300025942 Bacteria 57858
94 Ga0207689_10039612 3300025942 Bacteria 3901
95 Ga0207661_10000062 3300025944 Bacteria 75988
96 Ga0207679_10000040 3300025945 Bacteria 127317
97 Ga0207677_10083555 3300026023 Unclassified 2299
98 Ga0207678_10001745 3300026067 Bacteria 19903
99 Ga0207641_10000030 3300026088 Bacteria 224468
100 Ga0207648_10002816 3300026089 Bacteria 18436
101 Ga0207676_10000134 3300026095 Bacteria 65594
102 Ga0207674_10008484 3300026116 Bacteria 11866
103 Ga0207683_10000186 3300026121 Bacteria 53265
104 Ga0268266_10000806 3300028379 Bacteria 41585
105 Ga0268266_10046417 3300028379 Bacteria 3719
106 Ga0268265_10010308 3300028380 Bacteria 6309
107 Ga0268264_10021154 3300028381 Bacteria 5313
108 Ga0268264_10032386 3300028381 Unclassified 4289
109 Ga0265762_1001213 3300030760 Bacteria 4675
110 Ga0265330_10006278 3300031235 Bacteria 5874
111 Ga0265327_10000023 3300031251 Bacteria 382703
112 Ga0307408_100068867 3300031548 Bacteria 2607
113 Ga0265314_10015339 3300031711 Bacteria 6083
114 Ga0307410_10013838 3300031852 Unclassified 4723
115 Ga0307412_10098350 3300031911 Bacteria 2064
116 Ga0307409_100052268 3300031995 Bacteria 3131
117 Ga0307416_100156805 3300032002 Unclassified 2097
118 Ga0307411_10022293 3300032005 Unclassified 3725
119 Ga0307411_10122842 3300032005 Bacteria 1882
120 Ga0307415_100040658 3300032126 Bacteria 3082
121 Ga0395900_0279808 3300037418 Bacteria 1661
122 Ga0395898_0060098 3300037466 Bacteria 3695
123 Ga0436365_0109671 3300039437 Bacteria 3287
124 Ga0451577_0025568 3300042876 Bacteria 5355
125 Ga0451577_0037256 3300042876 Bacteria 4378
126 Ga0453683_0000087 3300044673 Bacteria 138993
127 Ga0453683_0107670 3300044673 Bacteria 1752
128 Ga0453684_0003381 3300044712 Bacteria 36089
129 Ga0451576_0028313 3300045051 Bacteria 6003
130 Ga0495629_0000006 3300046459 Bacteria 389181
131 Ga0495638_0011893 3300046460 Bacteria 5983
132 Ga0495641_0056036 3300046461 Bacteria 1788
133 Ga0495582_0009770 3300046473 Bacteria 5284
134 Ga0495586_0013404 3300046535 Bacteria 4347
135 Ga0495634_0147093 3300046642 Bacteria 1492
136 Ga0495635_0000352 3300046663 Bacteria 29243
137 Ga0495647_0006255 3300046681 Bacteria 3936
138 Ga0495658_0000012 3300046683 Bacteria 103335
139 Ga0495613_0001718 3300046689 Bacteria 16671
140 Ga0495581_0000034 3300047315 Bacteria 50614
141 Ga0495676_0114214 3300047321 Bacteria 1976
142 Ga0495680_0000681 3300047322 Bacteria 37994
143 Ga0495686_0122396 3300047472 Unclassified 1549
144 Ga0495614_0002431 3300048089 Bacteria 8272
145 Ga0496104_0006045 3300048907 Bacteria 10619
146 Ga0496113_0022334 3300048916 Unclassified 4474
147 nmdc:mga0n895_325_c1 3300050512 Bacteria 30724
148 nmdc:mga0n895_5779_c1 3300050512 Bacteria 10383
149 nmdc:mga0rr50_12031_c1 3300050513 Bacteria 5571
150 nmdc:mga0rr50_57035_c1 3300050513 Bacteria 2920
151 nmdc:mga08x19_12353_c1 3300050514 Bacteria 5143
152 Ga0495619_0001367 3300053085 Bacteria 16044
153 2599021971 2597490337 Archaea 2364912
154 2738763215 2738541284 Bacteria 5199923
155 Ga0207641_10159803
156 SwRhRL2b_contig_1663050
157 LJNas_1000055
158 JGI24743J22301_10002029
159 JGI25162J39368_1000204
160 JGI25164J39214_1000944
161 JGI25165J46597_1000753
162 rootL2_10329522
163 rootH1_10367482
164 Ga0065714_10002854
165 Ga0065704_10070140
166 Ga0070670_100150744
167 Ga0070680_100013709
168 Ga0070680_100129209
169 Ga0070689_100004910
170 Ga0070675_100015531
171 Ga0070674_100016320
172 Ga0070674_100020742
173 Ga0070709_10005051
174 Ga0070710_10013029
175 Ga0070701_10015069
176 Ga0070708_100017885
177 Ga0070708_100071860
178 Ga0070678_100020375
179 Ga0070662_100080966
180 Ga0070681_10147991
181 Ga0068867_100159255
182 Ga0070679_100024496
183 Ga0070679_100088144
184 Ga0070697_100085006
185 Ga0070695_100005669
186 Ga0070696_100116936
187 Ga0070665_100022202
188 Ga0068855_100018972
189 Ga0068864_100039464
190 Ga0068863_100027828
191 Ga0068863_100060500
192 Ga0070715_10004043
193 Ga0070716_100000114
194 Ga0070712_100005030
195 Ga0070712_100035993
196 Ga0075428_100034819
197 Ga0075434_100000564
198 Ga0075434_100007340
199 Ga0075434_100208341
200 Ga0075435_100017380
201 Ga0075435_100066637
202 Ga0075435_100229795
203 Ga0099795_10002828
204 Ga0105240_10118571
205 Ga0105245_10135456
206 Ga0105248_10085289
207 Ga0105237_10134726
208 Ga0105249_10246306
209 Ga0105239_10000415
210 Ga0157371_10015842
211 Ga0157370_10095754
212 Ga0157374_10020777
213 Ga0163162_10134231
214 Ga0157372_10033108
215 Ga0157372_10241330
216 Ga0163163_10011131
217 Ga0157380_10172861
218 Ga0163161_10001159
219 Ga0213874_10010316
220 Ga0213876_10051905
221 Ga0207427_100223
222 Ga0209437_100164
223 Ga0209233_1000242
224 Ga0207697_10034583
225 Ga0207692_10006624
226 Ga0207692_10007735
227 Ga0207685_10002378
228 Ga0207699_10005445
229 Ga0207645_10000173
230 Ga0207643_10001851
231 Ga0207707_10088590
232 Ga0207693_10021306
233 Ga0207663_10001242
234 Ga0207660_10036060
235 Ga0207660_10118626
236 Ga0207657_10000361
237 Ga0207649_10002818
238 Ga0207650_10000024
239 Ga0207687_10050339
240 Ga0207644_10014422
241 Ga0207706_10000216
242 Ga0207670_10003894
243 Ga0207670_10048431
244 Ga0207665_10000040
245 Ga0207691_10000072
246 Ga0207711_10042040
247 Ga0207689_10000160
248 Ga0207689_10039612
249 Ga0207661_10000062
250 Ga0207679_10000040
251 Ga0207677_10083555
252 Ga0207678_10001745
253 Ga0207641_10000030
254 Ga0207648_10002816
255 Ga0207676_10000134
256 Ga0207674_10008484
257 Ga0207683_10000186
258 Ga0268266_10000806
259 Ga0268266_10046417
260 Ga0268265_10010308
261 Ga0268264_10021154
262 Ga0268264_10032386
263 Ga0265762_1001213
264 Ga0265330_10006278
265 Ga0265327_10000023
266 Ga0307408_100068867
267 Ga0265314_10015339
268 Ga0307410_10013838
269 Ga0307412_10098350
270 Ga0307409_100052268
271 Ga0307416_100156805
272 Ga0307411_10022293
273 Ga0307411_10122842
274 Ga0307415_100040658
275 Ga0395900_0279808
276 Ga0395898_0060098
277 Ga0436365_0109671
278 Ga0451577_0025568
279 Ga0451577_0037256
280 Ga0453683_0000087
281 Ga0453683_0107670
282 Ga0453684_0003381
283 Ga0451576_0028313
284 Ga0495629_0000006
285 Ga0495638_0011893
286 Ga0495641_0056036
287 Ga0495582_0009770
288 Ga0495586_0013404
289 Ga0495634_0147093
290 Ga0495635_0000352
291 Ga0495647_0006255
292 Ga0495658_0000012
293 Ga0495613_0001718
294 Ga0495581_0000034
295 Ga0495676_0114214
296 Ga0495680_0000681
297 Ga0495686_0122396
298 Ga0495614_0002431
299 Ga0496104_0006045
300 Ga0496113_0022334
301 nmdc:mga0n895_325_c1
302 nmdc:mga0n895_5779_c1
303 nmdc:mga0rr50_12031_c1
304 nmdc:mga0rr50_57035_c1
305 nmdc:mga08x19_12353_c1
306 Ga0495619_0001367
307 2599021971
308 2738763215

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

403

482

0.98

PF00534

Glycos_transf_1

Glycosyl transferases group 1

216

389

0.96

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

229

375

0.88

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

18

210

0.86

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

245

397

0.86

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

15

205

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.866 234 392
3qhp-assembly2.cif.gz_B crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8597 234 392
5d00-assembly1.cif.gz_B crystal structure of bsha from b. subtilis complexed with n-acetylglucosaminyl-malate and ump 0.8374 2 411
5d01-assembly1.cif.gz_B crystal structure of bsha from b. subtilis complexed with n-acetylglucosaminyl-malate 0.8354 2 411
3qhp-assembly2.cif.gz_B crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8333 234 392
ID Description Score Start End Superfamily
af_Q2G1K0_190_352_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9248 233 393 3.40.50.2000
af_Q2G1K0_190_352_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9088 233 393 3.40.50.2000
5d00A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.906 217 396 3.40.50.2000
af_Q4D163_355_523_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9032 222 390 3.40.50.2000
5d00A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9011 217 396 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A2G9Y2A1-F1-model_v4 Glycosyltransferase WbuB 0.9731 233 411 GO:0016757
AF-A0A1F9D1D3-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9722 278 397 GO:0016757
AF-A0A7C4ZRW2-F1-model_v4 Glycosyltransferase 0.9591 244 412 GO:0016757
AF-A0A2M8NXT1-F1-model_v4 Glycosyltransferase WbuB 0.9544 1 411 GO:0016757
AF-A0A2M9P232-F1-model_v4 Glycosyltransferase WbuB 0.9542 248 410 GO:0009103
GO:0016757
GO:0045226

Map