F218223

General Info

Members Datasets Scaffolds Average Seq Length
153 82 306 248

Family's Representative Sequence

Representative Sequence 3300050513|nmdc:mga0rr50_104627_c1|nmdc:mga0rr50_104627_c1_26_877
Length 283
Sequence MAERDRHWRRDSLRRYFSQPDQHPTRTVLGTSSRFSRIAKMSSAEIAVECRGVHKEFGKADAKVLALRGVDLDVSYGAMTLLVGPSGCGKTTLLSVITGLLNSNGGEVTVLGEQVERLPGRQQILFRRKNLGFVFQQYNLLPALTAAENAAVPLLADGMSKKKAVEKAKRLLDTLGIGERMNALPSELSGGQQQRVALARALVHEPRLLVCDEPTAALDAETGNTVMKLLEAEAVRPDRAVLVVTHDNRIFGFADTIARMDDGRIVEVETGLRNGHHGELAAD

Samples

Sample ID Description Type Environment
1 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
24 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
25 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
31 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
32 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
33 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
34 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
35 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
36 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
37 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
38 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
39 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
42 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
43 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
44 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
45 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
46 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
47 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
48 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
49 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
50 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
51 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
52 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
53 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
54 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
55 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
56 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
57 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
58 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
59 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
60 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
61 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
62 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
63 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
64 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
67 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
68 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
69 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
70 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
71 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
72 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
73 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
74 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
75 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
76 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
77 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
78 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
79 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
80 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
81 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
82 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.35
Metatranscriptomes 0.65
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.61
Nodule 0
Rhizoplane 0
Rhizosphere 94.77
Stem 0
Stem Tuber 0
Unclassified 5.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0rr50_104627_c1 3300050513 Bacteria 2230
2 JGI25406J46586_10009045 3300003203 Bacteria 4477
3 Ga0068868_100133735 3300005338 Unclassified 2031
4 Ga0070710_10328001 3300005437 Bacteria 1007
5 Ga0070708_100001424 3300005445 Bacteria 18261
6 Ga0070708_100003247 3300005445 Bacteria 12688
7 Ga0070708_100031743 3300005445 Bacteria 4574
8 Ga0070708_100034172 3300005445 Bacteria 4422
9 Ga0070708_100085906 3300005445 Bacteria 2857
10 Ga0070708_100108019 3300005445 Bacteria 2555
11 Ga0070708_100442752 3300005445 Bacteria 1226
12 Ga0070708_100519561 3300005445 Bacteria 1123
13 Ga0070706_100004084 3300005467 Bacteria 14196
14 Ga0070706_100006952 3300005467 Bacteria 10673
15 Ga0070706_100017914 3300005467 Bacteria 6534
16 Ga0070706_100066428 3300005467 Bacteria 3336
17 Ga0070706_100091242 3300005467 Bacteria 2825
18 Ga0070706_100453547 3300005467 Bacteria 1193
19 Ga0070707_100005049 3300005468 Bacteria 12377
20 Ga0070707_100048990 3300005468 Bacteria 4049
21 Ga0070707_100063907 3300005468 Bacteria 3532
22 Ga0070707_100121006 3300005468 Bacteria 2542
23 Ga0070707_100420930 3300005468 Bacteria 1296
24 Ga0070698_100005858 3300005471 Bacteria 13426
25 Ga0070698_100079851 3300005471 Bacteria 3267
26 Ga0070699_100048623 3300005518 Bacteria 3671
27 Ga0070699_100130161 3300005518 Bacteria 2218
28 Ga0070699_100394961 3300005518 Unclassified 1250
29 Ga0070699_100533492 3300005518 Bacteria 1068
30 Ga0070697_100019987 3300005536 Bacteria 5292
31 Ga0070697_100043407 3300005536 Bacteria 3641
32 Ga0070697_100050316 3300005536 Bacteria 3381
33 Ga0070697_100058998 3300005536 Bacteria 3123
34 Ga0068855_100183443 3300005563 Bacteria 2365
35 Ga0081455_10019210 3300005937 Bacteria 6474
36 Ga0081455_10267726 3300005937 Bacteria 1241
37 Ga0081539_10000167 3300005985 Bacteria 153726
38 Ga0070717_10002965 3300006028 Bacteria 12066
39 Ga0070716_100023660 3300006173 Bacteria 3259
40 Ga0070716_100121170 3300006173 Bacteria 1638
41 Ga0075428_100003020 3300006844 Bacteria 18367
42 Ga0075428_100030708 3300006844 Bacteria 5942
43 Ga0075431_100019476 3300006847 Bacteria 6918
44 Ga0075433_10041188 3300006852 Bacteria 4001
45 Ga0075433_10058459 3300006852 Bacteria 3372
46 Ga0075433_10409913 3300006852 Bacteria 1195
47 Ga0075434_100108661 3300006871 Bacteria 2784
48 Ga0075434_100126893 3300006871 Bacteria 2568
49 Ga0075434_100386927 3300006871 Bacteria 1419
50 Ga0075436_100057866 3300006914 Bacteria 2677
51 Ga0075436_100214771 3300006914 Bacteria 1364
52 Ga0075436_100449840 3300006914 Bacteria 938
53 Ga0075435_100091859 3300007076 Bacteria 2506
54 Ga0075435_100099809 3300007076 Unclassified 2404
55 Ga0075435_100135346 3300007076 Bacteria 2064
56 Ga0114129_10009682 3300009147 Bacteria 13750
57 Ga0114129_10038680 3300009147 Bacteria 6727
58 Ga0157374_10250593 3300013296 Unclassified 1742
59 Ga0213875_10056749 3300021388 Bacteria 1835
60 Ga0213875_10188261 3300021388 Unclassified 970
61 Ga0207684_10018571 3300025910 Bacteria 5954
62 Ga0207684_10028477 3300025910 Bacteria 4760
63 Ga0207684_10038611 3300025910 Bacteria 4052
64 Ga0207684_10069047 3300025910 Bacteria 3003
65 Ga0207646_10002188 3300025922 Bacteria 23310
66 Ga0207646_10005374 3300025922 Bacteria 13486
67 Ga0207646_10061066 3300025922 Unclassified 3365
68 Ga0207646_10242123 3300025922 Bacteria 1629
69 Ga0207646_10244226 3300025922 Bacteria 1622
70 Ga0207665_10011568 3300025939 Bacteria 5797
71 Ga0207665_10029958 3300025939 Bacteria 3596
72 Ga0207665_10147355 3300025939 Bacteria 1683
73 Ga0207667_10260964 3300025949 Bacteria 1772
74 Ga0207677_10093672 3300026023 Unclassified 2191
75 Ga0265760_10003065 3300031090 Bacteria 4881
76 Ga0373943_0099694 3300035170 Bacteria 1517
77 Ga0373927_0116863 3300035695 Bacteria 1739
78 Ga0373947_0015227 3300035725 Bacteria 4415
79 Ga0373937_0051953 3300036401 Bacteria 3757
80 Ga0373925_0005305 3300037068 Bacteria 9622
81 Ga0395899_0039741 3300037312 Bacteria 3520
82 Ga0395900_0039643 3300037418 Bacteria 4853
83 Ga0395905_0151888 3300037471 Bacteria 2178
84 Ga0395905_0487859 3300037471 Bacteria 1132
85 Ga0436364_0088971 3300037853 Bacteria 1777
86 Ga0395901_0085954 3300038443 Bacteria 3288
87 Ga0436365_0375493 3300039437 Bacteria 2191
88 Ga0436360_1145520 3300039438 Bacteria 12387
89 Ga0436361_1012848 3300039447 Bacteria 783
90 Ga0451576_0673230 3300045051 Bacteria 1087
91 Ga0495592_0000071 3300046454 Bacteria 92699
92 Ga0495580_0009086 3300046472 Bacteria 7838
93 Ga0495662_0010629 3300046476 Bacteria 4502
94 Ga0495664_0004221 3300046477 Bacteria 7845
95 Ga0495664_0017818 3300046477 Bacteria 4061
96 Ga0495618_0026400 3300046514 Bacteria 3610
97 Ga0495628_0002709 3300046516 Bacteria 15864
98 Ga0495628_0002899 3300046516 Bacteria 15360
99 Ga0495630_0000006 3300046517 Bacteria 400463
100 Ga0495630_0010438 3300046517 Bacteria 6706
101 Ga0495630_0175090 3300046517 Bacteria 1635
102 Ga0495630_0330984 3300046517 Bacteria 1165
103 Ga0495643_0000580 3300046522 Bacteria 44701
104 Ga0495666_0010452 3300046526 Bacteria 4627
105 Ga0495666_0114759 3300046526 Bacteria 1264
106 Ga0495652_0020485 3300046529 Bacteria 5880
107 Ga0495586_0000414 3300046535 Bacteria 25855
108 Ga0495645_0005936 3300046543 Bacteria 8437
109 Ga0495645_0019495 3300046543 Bacteria 4882
110 Ga0495657_0053221 3300046675 Bacteria 2710
111 Ga0495599_0001075 3300046678 Bacteria 15387
112 Ga0495599_0024697 3300046678 Bacteria 3758
113 Ga0495623_0091924 3300046679 Bacteria 1861
114 Ga0495624_0126501 3300046690 Bacteria 1568
115 Ga0495624_0158019 3300046690 Bacteria 1385
116 Ga0495604_0028942 3300047317 Bacteria 4408
117 Ga0495674_0005104 3300047319 Bacteria 12614
118 Ga0495674_0018967 3300047319 Bacteria 6396
119 Ga0495684_0013939 3300047471 Bacteria 6184
120 Ga0501299_023653 3300049522 Bacteria 1141
121 Ga0501034_0003874 3300049571 Bacteria 16842
122 Ga0501206_005124 3300049653 Bacteria 1686
123 Ga0501209_083678 3300049656 Bacteria 922
124 Ga0501216_032562 3300049660 Bacteria 969
125 Ga0501223_016690 3300049663 Bacteria 1451
126 Ga0501230_001011 3300049667 Bacteria 3204
127 Ga0501243_021535 3300049675 Bacteria 1064
128 Ga0501257_015374 3300049686 Bacteria 1767
129 Ga0501234_021841 3300049707 Bacteria 1021
130 Ga0501272_001303 3300049769 Bacteria 2349
131 nmdc:mga06z11_200472_c1 3300050494 Bacteria 1159
132 nmdc:mga05p37_21283_c1 3300050507 Bacteria 6828
133 nmdc:mga05p37_726_c1 3300050507 Bacteria 36549
134 nmdc:mga06r32_608896_c1 3300050510 Bacteria 1063
135 nmdc:mga06r32_732842_c1 3300050510 Bacteria 952
136 nmdc:mga0n895_119890_c1 3300050512 Bacteria 2652
137 nmdc:mga0n895_27528_c1 3300050512 Bacteria 5401
138 nmdc:mga0n895_30288_c1 3300050512 Bacteria 5170
139 nmdc:mga0n895_51658_c1 3300050512 Bacteria 4033
140 nmdc:mga0rr50_244303_c1 3300050513 Bacteria 1489
141 nmdc:mga0rr50_35122_c1 3300050513 Bacteria 3597
142 nmdc:mga0rr50_55680_c1 3300050513 Bacteria 2951
143 nmdc:mga0rr50_99853_c1 3300050513 Bacteria 2278
144 nmdc:mga08x19_194974_c1 3300050514 Bacteria 1387
145 nmdc:mga08x19_226331_c1 3300050514 Unclassified 1286
146 nmdc:mga08x19_74452_c1 3300050514 Bacteria 2219
147 nmdc:mga08x19_75163_c1 3300050514 Bacteria 2209
148 nmdc:mga0a205_102595_c1 3300050515 Bacteria 2759
149 nmdc:mga0a205_29085_c1 3300050515 Bacteria 5287
150 nmdc:mga0a205_38826_c1 3300050515 Bacteria 4582
151 Ga0500568_0010122 3300053139 Bacteria 4436
152 Ga0500616_0000330 3300053153 Bacteria 68044
153 Ga0500616_0018389 3300053153 Bacteria 3952
154 nmdc:mga0rr50_104627_c1
155 JGI25406J46586_10009045
156 Ga0068868_100133735
157 Ga0070710_10328001
158 Ga0070708_100001424
159 Ga0070708_100003247
160 Ga0070708_100031743
161 Ga0070708_100034172
162 Ga0070708_100085906
163 Ga0070708_100108019
164 Ga0070708_100442752
165 Ga0070708_100519561
166 Ga0070706_100004084
167 Ga0070706_100006952
168 Ga0070706_100017914
169 Ga0070706_100066428
170 Ga0070706_100091242
171 Ga0070706_100453547
172 Ga0070707_100005049
173 Ga0070707_100048990
174 Ga0070707_100063907
175 Ga0070707_100121006
176 Ga0070707_100420930
177 Ga0070698_100005858
178 Ga0070698_100079851
179 Ga0070699_100048623
180 Ga0070699_100130161
181 Ga0070699_100394961
182 Ga0070699_100533492
183 Ga0070697_100019987
184 Ga0070697_100043407
185 Ga0070697_100050316
186 Ga0070697_100058998
187 Ga0068855_100183443
188 Ga0081455_10019210
189 Ga0081455_10267726
190 Ga0081539_10000167
191 Ga0070717_10002965
192 Ga0070716_100023660
193 Ga0070716_100121170
194 Ga0075428_100003020
195 Ga0075428_100030708
196 Ga0075431_100019476
197 Ga0075433_10041188
198 Ga0075433_10058459
199 Ga0075433_10409913
200 Ga0075434_100108661
201 Ga0075434_100126893
202 Ga0075434_100386927
203 Ga0075436_100057866
204 Ga0075436_100214771
205 Ga0075436_100449840
206 Ga0075435_100091859
207 Ga0075435_100099809
208 Ga0075435_100135346
209 Ga0114129_10009682
210 Ga0114129_10038680
211 Ga0157374_10250593
212 Ga0213875_10056749
213 Ga0213875_10188261
214 Ga0207684_10018571
215 Ga0207684_10028477
216 Ga0207684_10038611
217 Ga0207684_10069047
218 Ga0207646_10002188
219 Ga0207646_10005374
220 Ga0207646_10061066
221 Ga0207646_10242123
222 Ga0207646_10244226
223 Ga0207665_10011568
224 Ga0207665_10029958
225 Ga0207665_10147355
226 Ga0207667_10260964
227 Ga0207677_10093672
228 Ga0265760_10003065
229 Ga0373943_0099694
230 Ga0373927_0116863
231 Ga0373947_0015227
232 Ga0373937_0051953
233 Ga0373925_0005305
234 Ga0395899_0039741
235 Ga0395900_0039643
236 Ga0395905_0151888
237 Ga0395905_0487859
238 Ga0436364_0088971
239 Ga0395901_0085954
240 Ga0436365_0375493
241 Ga0436360_1145520
242 Ga0436361_1012848
243 Ga0451576_0673230
244 Ga0495592_0000071
245 Ga0495580_0009086
246 Ga0495662_0010629
247 Ga0495664_0004221
248 Ga0495664_0017818
249 Ga0495618_0026400
250 Ga0495628_0002709
251 Ga0495628_0002899
252 Ga0495630_0000006
253 Ga0495630_0010438
254 Ga0495630_0175090
255 Ga0495630_0330984
256 Ga0495643_0000580
257 Ga0495666_0010452
258 Ga0495666_0114759
259 Ga0495652_0020485
260 Ga0495586_0000414
261 Ga0495645_0005936
262 Ga0495645_0019495
263 Ga0495657_0053221
264 Ga0495599_0001075
265 Ga0495599_0024697
266 Ga0495623_0091924
267 Ga0495624_0126501
268 Ga0495624_0158019
269 Ga0495604_0028942
270 Ga0495674_0005104
271 Ga0495674_0018967
272 Ga0495684_0013939
273 Ga0501299_023653
274 Ga0501034_0003874
275 Ga0501206_005124
276 Ga0501209_083678
277 Ga0501216_032562
278 Ga0501223_016690
279 Ga0501230_001011
280 Ga0501243_021535
281 Ga0501257_015374
282 Ga0501234_021841
283 Ga0501272_001303
284 nmdc:mga06z11_200472_c1
285 nmdc:mga05p37_21283_c1
286 nmdc:mga05p37_726_c1
287 nmdc:mga06r32_608896_c1
288 nmdc:mga06r32_732842_c1
289 nmdc:mga0n895_119890_c1
290 nmdc:mga0n895_27528_c1
291 nmdc:mga0n895_30288_c1
292 nmdc:mga0n895_51658_c1
293 nmdc:mga0rr50_244303_c1
294 nmdc:mga0rr50_35122_c1
295 nmdc:mga0rr50_55680_c1
296 nmdc:mga0rr50_99853_c1
297 nmdc:mga08x19_194974_c1
298 nmdc:mga08x19_226331_c1
299 nmdc:mga08x19_74452_c1
300 nmdc:mga08x19_75163_c1
301 nmdc:mga0a205_102595_c1
302 nmdc:mga0a205_29085_c1
303 nmdc:mga0a205_38826_c1
304 Ga0500568_0010122
305 Ga0500616_0000330
306 Ga0500616_0018389

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

67

216

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9521 12 237
5lj9-assembly3.cif.gz_C structure of the e. coli macb abc domain (c2221) 0.9484 10 237
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9469 10 233
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9441 10 234
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9433 10 233
ID Description Score Start End Superfamily
af_P9WQK5_1_219_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9624 12 223 3.40.50.300
af_A4I4M8_123_401_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9615 38 236 3.40.50.300
af_Q2FUZ1_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9537 12 238 3.40.50.300
af_Q8T664_36_360_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9531 10 237 3.40.50.300
af_Q2FVR1_1_221_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9527 12 231 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1F7QJ82-F1-model_v4 ABC transporter domain-containing protein 0.9628 9 235 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A7C5T8D0-F1-model_v4 ATP-binding cassette domain-containing protein 0.9555 11 153 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A377TL40-F1-model_v4 Methionine ABC transporter ATP-binding protein (EC 3.6.3.-) 0.9551 62 196 GO:0005524
GO:0005886
GO:0016887
AF-A0A1V4HEF9-F1-model_v4 Macrolide ABC transporter ATP-binding protein 0.9547 12 235 GO:0005524
GO:0016887
AF-A0A7X7YC61-F1-model_v4 ABC transporter ATP-binding protein 0.9543 12 235 GO:0005524
GO:0005886
GO:0016887
GO:0022857

Map