F217774

General Info

Members Datasets Scaffolds Average Seq Length
153 124 111 281

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0022691|Ga0451576_0022691_5728_6630
Length 300
Sequence MQNGCPLIPQTLAENTAIFPESHTLNLGGKLLTLRPAVIMAILNTTPDSFWSGSRVHRSIPQLLERAEQALQQGADILDVGGMSTRPGAIEIPVKEELERIVPAIKALALAFPQTPLSVDTYRAEVAQAALDEGAALVNDVSGGTFDPNLFQLVAQRRVPYVLTHTPGKPSVMQEMTHYNEPIEDVVFRFFTQQLVALRQLGINDVILDPGFGFGKTQEQNYRLLKNLHQFAVLNLPILAGLSRKGMIWKALGVTPEDALPGTIVAHVLALQQGVSLLRVHDVEAARQAIAIVEQFNQAG

Samples

Sample ID Description Type Environment
1 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
2 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
3 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
4 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
5 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
6 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
7 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
8 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
9 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
10 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
11 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
12 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
13 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
14 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
15 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
16 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
17 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
18 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
19 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
20 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
21 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
22 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
23 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
24 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
25 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
26 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
27 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
28 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
29 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
30 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
31 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
32 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
33 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
34 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
35 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
36 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
37 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
38 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
39 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
40 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
41 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
42 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
43 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
44 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
45 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
46 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
47 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
48 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
49 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
50 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
51 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
52 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
53 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
54 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
55 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
56 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
57 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
58 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
59 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
60 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
61 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
62 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
63 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
64 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
65 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
78 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
98 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
102 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
103 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
104 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
105 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
106 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
121 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
122 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
123 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
124 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 71.9
Metatranscriptomes 0
Isolates 28.1

Biome Distribution

Category Percentage (%)
Aerial Root 1.31
Bulb 0
Endosphere 13.07
Nodule 0.65
Rhizoplane 1.31
Rhizosphere 61.44
Stem 0
Stem Tuber 0
Unclassified 22.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10003982 3300001979 Bacteria 6412
2 JGI25154J39366_1000202 3300002738 Bacteria 42933
3 JGI25157J39369_1006172 3300002741 Unclassified 1859
4 JGI25153J46596_10004261 3300003215 Bacteria 7742
5 rootH2_10112387 3300003320 Bacteria 8931
6 rootH2_10143623 3300003320 Bacteria 2265
7 rootH1_10011519 3300003316 Bacteria 1319
8 rootH1_10011519 3300003323 Bacteria 7301
9 rootH1_10062604 3300003323 Bacteria 9248
10 JGI25160J50197_1004763 3300003354 Bacteria 5794
11 Ga0055526_1024655 3300003771 Bacteria 1959
12 Ga0055526_1031581 3300003771 Unclassified 1514
13 Ga0055528_1001774 3300003790 Bacteria 12382
14 Ga0055530_10005266 3300003791 Bacteria 6223
15 Ga0065165_1000536 3300005262 Bacteria 57578
16 Ga0065165_1012262 3300005262 Bacteria 3503
17 Ga0065714_10067919 3300005288 Bacteria 5106
18 Ga0065704_10077049 3300005289 Bacteria 4873
19 Ga0070658_10476966 3300005327 Bacteria 1076
20 Ga0070683_100027051 3300005329 Bacteria 5170
21 Ga0070682_100000158 3300005337 Bacteria 51858
22 Ga0070660_100026944 3300005339 Bacteria 4284
23 Ga0070668_100267377 3300005347 Bacteria 1424
24 Ga0070674_100062923 3300005356 Bacteria 2595
25 Ga0070684_100034711 3300005535 Bacteria 4314
26 Ga0068862_100735818 3300005844 Bacteria 958
27 Ga0105244_10000069 3300009036 Bacteria 119620
28 Ga0105250_10138093 3300009092 Bacteria 1009
29 Ga0105243_10000130 3300009148 Bacteria 85659
30 Ga0105243_10042252 3300009148 Bacteria 3569
31 Ga0105239_10025054 3300010375 Bacteria 6572
32 Ga0157373_10000022 3300013100 Bacteria 164884
33 Ga0157371_10000037 3300013102 Bacteria 214866
34 Ga0157371_10016877 3300013102 Bacteria 5437
35 Ga0157370_10020462 3300013104 Bacteria 6610
36 Ga0157370_10024019 3300013104 Bacteria 6044
37 Ga0157370_10135349 3300013104 Bacteria 2297
38 Ga0157369_10001515 3300013105 Bacteria 28519
39 Ga0157375_10000789 3300013308 Bacteria 27683
40 Ga0157375_10183497 3300013308 Bacteria 2245
41 Ga0157380_10074090 3300014326 Unclassified 2763
42 Ga0182008_10000129 3300014497 Bacteria 57359
43 Ga0182006_1000015 3300015261 Bacteria 325938
44 Ga0163161_10004414 3300017792 Bacteria 9810
45 Ga0209646_1000006 3300025246 Bacteria 694084
46 Ga0209026_1003798 3300025250 Bacteria 4776
47 Ga0209673_1000299 3300025273 Bacteria 91734
48 Ga0209675_1000179 3300025291 Bacteria 71689
49 Ga0209564_1014233 3300025295 Bacteria 3323
50 Ga0209564_1017820 3300025295 Bacteria 2742
51 Ga0209758_1000497 3300025297 Bacteria 64050
52 Ga0209758_1007875 3300025297 Bacteria 7084
53 Ga0209050_1000771 3300025298 Bacteria 46024
54 Ga0207426_1000562 3300025302 Bacteria 50691
55 Ga0207426_1001710 3300025302 Bacteria 16850
56 Ga0209257_1017813 3300025304 Bacteria 2774
57 Ga0207655_1000492 3300025728 Bacteria 50910
58 Ga0207705_10382572 3300025909 Bacteria 1087
59 Ga0207657_10088646 3300025919 Bacteria 2585
60 Ga0207709_10000544 3300025935 Bacteria 32275
61 Ga0207661_10038531 3300025944 Bacteria 3747
62 Ga0207678_10139292 3300026067 Bacteria 2070
63 Ga0307412_10000019 3300031911 Bacteria 266611
64 Ga0307412_10013241 3300031911 Bacteria 4829
65 Ga0307412_10013456 3300031911 Bacteria 4800
66 Ga0307416_100000004 3300032002 Bacteria 505535
67 Ga0307414_10000010 3300032004 Bacteria 357863
68 Ga0307414_10037464 3300032004 Bacteria 3248
69 Ga0307414_10306157 3300032004 Bacteria 1346
70 Ga0436361_0274244 3300039447 Bacteria 1119
71 Ga0451576_0022691 3300045051 Bacteria 6800
72 Ga0451576_0585078 3300045051 Bacteria 1173
73 Ga0495627_000071 3300046453 Bacteria 124716
74 Ga0495590_0014129 3300046457 Bacteria 2921
75 Ga0495606_0011191 3300046507 Bacteria 7345
76 Ga0495606_0111451 3300046507 Bacteria 1650
77 Ga0495610_0000001 3300046512 Bacteria 1620061
78 Ga0495632_0004805 3300046519 Bacteria 9086
79 Ga0495643_0021120 3300046522 Bacteria 3741
80 Ga0495643_0023843 3300046522 Bacteria 3474
81 Ga0495663_0000344 3300046525 Bacteria 17294
82 Ga0495663_0010089 3300046525 Bacteria 2623
83 Ga0495654_0000001 3300046530 Bacteria 1513197
84 Ga0495609_0000060 3300046538 Bacteria 139944
85 Ga0495633_0000018 3300046558 Bacteria 243398
86 Ga0495633_0002767 3300046558 Bacteria 12132
87 Ga0495625_0004002 3300046660 Bacteria 14115
88 Ga0495686_0000022 3300047472 Bacteria 403456
89 Ga0495686_0003156 3300047472 Bacteria 14533
90 Ga0496103_0213738 3300048906 Bacteria 1240
91 Ga0496113_0278749 3300048916 Bacteria 1337
92 Ga0496116_0000027 3300048919 Bacteria 448077
93 Ga0496117_0000021 3300048920 Bacteria 444168
94 Ga0496118_0000531 3300048921 Bacteria 62520
95 Ga0496119_0000004 3300048922 Bacteria 536344
96 Ga0496122_0000119 3300048925 Bacteria 182576
97 Ga0496122_0000344 3300048925 Bacteria 100498
98 Ga0496122_0000376 3300048925 Bacteria 95506
99 Ga0496122_0007672 3300048925 Bacteria 11895
100 Ga0496122_0016702 3300048925 Bacteria 6919
101 Ga0496123_0011780 3300048926 Bacteria 7533
102 Ga0496123_0022297 3300048926 Bacteria 4885
103 Ga0496123_0066239 3300048926 Bacteria 2289
104 Ga0496124_0002684 3300048927 Bacteria 22784
105 Ga0496125_0000169 3300048928 Bacteria 145879
106 Ga0496125_0007721 3300048928 Bacteria 11395
107 Ga0496126_0000744 3300048929 Bacteria 59025
108 Ga0501241_000124 3300049758 Bacteria 16750
109 Ga0501269_000217 3300049766 Bacteria 16814
110 Ga0500652_006079 3300053131 Bacteria 3856
111 Ga0500661_008823 3300055283 Bacteria 1854

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046457 Ga0495590_0014129 Ga0495590_0014129_1738_2481 247
2 3300045051 Ga0451576_0585078 Ga0451576_0585078_411_1163 250
3 iso_pu_bacteria 2871720351 2871720960 252
4 iso_pu_bacteria 2739367874 2740061315 253
5 iso_pu_bacteria 2993480792 2993481105 253
6 3300013308 Ga0157375_10183497 Ga0157375_101834973 254
7 3300046522 Ga0495643_0023843 Ga0495643_0023843_1934_2698 254
8 3300046519 Ga0495632_0004805 Ga0495632_0004805_6229_6999 255
9 3300046525 Ga0495663_0000344 Ga0495663_0000344_9815_10582 255
10 3300049766 Ga0501269_000217 Ga0501269_000217_3940_4707 255
11 3300009148 Ga0105243_10042252 Ga0105243_100422523 256
12 3300039447 Ga0436361_0274244 Ga0436361_0274244_132_902 256
13 3300048928 Ga0496125_0000169 Ga0496125_0000169_29990_30760 256
14 3300046507 Ga0495606_0111451 Ga0495606_0111451_572_1345 257
15 3300015261 Ga0182006_1000015 Ga0182006_1000015162 258
16 3300046512 Ga0495610_0000001 Ga0495610_0000001_579707_580486 258
17 3300046522 Ga0495643_0021120 Ga0495643_0021120_2660_3439 258
18 3300025304 Ga0209257_1017813 Ga0209257_10178133 261
19 3300003323 rootH1_10011519 rootH1_100115193 267
20 3300005289 Ga0065704_10077049 Ga0065704_100770492 269
21 3300013102 Ga0157371_10000037 Ga0157371_10000037131 269
22 3300013105 Ga0157369_10001515 Ga0157369_1000151527 269
23 3300032004 Ga0307414_10000010 Ga0307414_1000001044 273
24 iso_pu_bacteria 2984572630 2984575221 274
25 iso_pu_bacteria 2984606641 2984608674 274
26 3300005288 Ga0065714_10067919 Ga0065714_100679195 276
27 3300005356 Ga0070674_100062923 Ga0070674_1000629233 276
28 3300014326 Ga0157380_10074090 Ga0157380_100740903 276
29 3300031911 Ga0307412_10013241 Ga0307412_100132414 276
30 3300046453 Ga0495627_000071 Ga0495627_000071_14895_15740 276
31 3300046530 Ga0495654_0000001 Ga0495654_0000001_15000_15845 276
32 3300046558 Ga0495633_0000018 Ga0495633_0000018_17036_17881 276
33 3300046558 Ga0495633_0002767 Ga0495633_0002767_6830_7678 276
34 3300046660 Ga0495625_0004002 Ga0495625_0004002_3217_4065 276
35 3300047472 Ga0495686_0003156 Ga0495686_0003156_1217_2062 276
36 iso_pu_bacteria 2585428115 2587943620 276
37 iso_pu_bacteria 2919399522 2919399707 276
38 iso_pu_bacteria 2929239360 2929242881 276
39 iso_pu_bacteria 2929921140 2929925146 276
40 iso_pu_bacteria 8003151029 8003155158 276
41 3300013100 Ga0157373_10000022 Ga0157373_10000022137 277
42 3300013102 Ga0157371_10016877 Ga0157371_100168772 277
43 3300013104 Ga0157370_10135349 Ga0157370_101353492 277
44 3300014497 Ga0182008_10000129 Ga0182008_1000012957 277
45 3300017792 Ga0163161_10004414 Ga0163161_1000441411 277
46 3300031911 Ga0307412_10013456 Ga0307412_100134562 277
47 3300032004 Ga0307414_10037464 Ga0307414_100374644 277
48 3300046507 Ga0495606_0011191 Ga0495606_0011191_1788_2636 277
49 3300049758 Ga0501241_000124 Ga0501241_000124_12447_13295 277
50 iso_pu_bacteria 2511231000 2511232713 277
51 iso_pu_bacteria 2582581281 2585158765 277
52 iso_pu_bacteria 2582581282 2585163053 277
53 iso_pu_bacteria 2585428095 2587865490 277
54 iso_pu_bacteria 2775506739 2775673528 277
55 iso_pu_bacteria 2919097161 2919097635 277
56 3300003320 rootH2_10112387 rootH2_101123877 278
57 3300003323 rootH1_10062604 rootH1_100626048 278
58 3300005329 Ga0070683_100027051 Ga0070683_1000270516 278
59 3300005337 Ga0070682_100000158 Ga0070682_10000015816 278
60 3300005339 Ga0070660_100026944 Ga0070660_1000269441 278
61 3300005347 Ga0070668_100267377 Ga0070668_1002673771 278
62 3300005535 Ga0070684_100034711 Ga0070684_1000347113 278
63 3300005844 Ga0068862_100735818 Ga0068862_1007358181 278
64 3300009036 Ga0105244_10000069 Ga0105244_1000006937 278
65 3300009148 Ga0105243_10000130 Ga0105243_1000013017 278
66 3300013104 Ga0157370_10020462 Ga0157370_100204624 278
67 3300013104 Ga0157370_10024019 Ga0157370_100240192 278
68 3300025291 Ga0209675_1000179 Ga0209675_100017962 278
69 3300025302 Ga0207426_1001710 Ga0207426_10017109 278
70 3300025728 Ga0207655_1000492 Ga0207655_100049238 278
71 3300025919 Ga0207657_10088646 Ga0207657_100886461 278
72 3300025935 Ga0207709_10000544 Ga0207709_1000054413 278
73 3300025944 Ga0207661_10038531 Ga0207661_100385313 278
74 3300026067 Ga0207678_10139292 Ga0207678_101392922 278
75 3300032002 Ga0307416_100000004 Ga0307416_100000004281 278
76 3300046538 Ga0495609_0000060 Ga0495609_0000060_107671_108543 278
77 3300048906 Ga0496103_0213738 Ga0496103_0213738_215_1081 278
78 3300048916 Ga0496113_0278749 Ga0496113_0278749_132_998 278
79 3300048919 Ga0496116_0000027 Ga0496116_0000027_294715_295581 278
80 3300048920 Ga0496117_0000021 Ga0496117_0000021_151664_152530 278
81 3300048921 Ga0496118_0000531 Ga0496118_0000531_37783_38649 278
82 3300048922 Ga0496119_0000004 Ga0496119_0000004_291650_292516 278
83 3300048925 Ga0496122_0000119 Ga0496122_0000119_115110_115976 278
84 3300048925 Ga0496122_0000344 Ga0496122_0000344_35300_36166 278
85 3300048925 Ga0496122_0000376 Ga0496122_0000376_65170_66036 278
86 3300048925 Ga0496122_0007672 Ga0496122_0007672_10687_11553 278
87 3300048926 Ga0496123_0011780 Ga0496123_0011780_342_1208 278
88 3300048926 Ga0496123_0022297 Ga0496123_0022297_736_1602 278
89 3300048926 Ga0496123_0066239 Ga0496123_0066239_1107_1973 278
90 3300048927 Ga0496124_0002684 Ga0496124_0002684_3187_4053 278
91 3300048928 Ga0496125_0007721 Ga0496125_0007721_3388_4254 278
92 3300048929 Ga0496126_0000744 Ga0496126_0000744_22936_23802 278
93 iso_pu_bacteria 2523533629 2524005526 278
94 iso_pu_bacteria 2582581278 2585141882 278
95 iso_pu_bacteria 2585428045 2587678357 278
96 iso_pu_bacteria 2585428182 2588209059 278
97 iso_pu_bacteria 2585428183 2588216170 278
98 iso_pu_bacteria 2585428184 2588220518 278
99 iso_pu_bacteria 2585428185 2588225234 278
100 iso_pu_bacteria 2588254255 2590602481 278
101 iso_pu_bacteria 2728369107 2729202203 278
102 iso_pu_bacteria 2751185877 2753671800 278
103 iso_pu_bacteria 2765235839 2765576719 278
104 iso_pu_bacteria 2772190705 2772606248 278
105 iso_pu_bacteria 2816332188 2816872020 278
106 iso_pu_bacteria 2889290771 2889292821 278
107 3300005327 Ga0070658_10476966 Ga0070658_104769662 279
108 3300025909 Ga0207705_10382572 Ga0207705_103825721 279
109 3300046525 Ga0495663_0010089 Ga0495663_0010089_241_1098 279
110 iso_pu_bacteria 2582581873 2585425527 279
111 iso_pu_bacteria 2585428187 2588234134 279
112 iso_pu_bacteria 2946013367 2946017267 279
113 iso_pu_bacteria 2977243572 2977246926 279
114 iso_pu_bacteria 2993372514 2993374204 279
115 3300001979 JGI24740J21852_10003982 JGI24740J21852_100039824 280
116 3300002738 JGI25154J39366_1000202 JGI25154J39366_100020235 280
117 3300002741 JGI25157J39369_1006172 JGI25157J39369_10061722 280
118 3300003215 JGI25153J46596_10004261 JGI25153J46596_100042615 280
119 3300003320 rootH2_10143623 rootH2_101436233 280
120 3300003354 JGI25160J50197_1004763 JGI25160J50197_10047634 280
121 3300003771 Ga0055526_1024655 Ga0055526_10246552 280
122 3300003771 Ga0055526_1031581 Ga0055526_10315812 280
123 3300003790 Ga0055528_1001774 Ga0055528_10017746 280
124 3300003791 Ga0055530_10005266 Ga0055530_100052664 280
125 3300005262 Ga0065165_1000536 Ga0065165_100053638 280
126 3300005262 Ga0065165_1012262 Ga0065165_10122621 280
127 3300009092 Ga0105250_10138093 Ga0105250_101380931 280
128 3300010375 Ga0105239_10025054 Ga0105239_100250543 280
129 3300013308 Ga0157375_10000789 Ga0157375_1000078911 280
130 3300025246 Ga0209646_1000006 Ga0209646_1000006444 280
131 3300025250 Ga0209026_1003798 Ga0209026_10037984 280
132 3300025273 Ga0209673_1000299 Ga0209673_100029923 280
133 3300025295 Ga0209564_1014233 Ga0209564_10142332 280
134 3300025295 Ga0209564_1017820 Ga0209564_10178203 280
135 3300025297 Ga0209758_1000497 Ga0209758_100049710 280
136 3300025297 Ga0209758_1007875 Ga0209758_10078754 280
137 3300025298 Ga0209050_1000771 Ga0209050_10007716 280
138 3300025302 Ga0207426_1000562 Ga0207426_10005627 280
139 3300031911 Ga0307412_10000019 Ga0307412_10000019201 280
140 3300032004 Ga0307414_10306157 Ga0307414_103061571 280
141 3300045051 Ga0451576_0022691 Ga0451576_0022691_5728_6630 280
142 3300047472 Ga0495686_0000022 Ga0495686_0000022_335992_336912 280
143 3300048925 Ga0496122_0016702 Ga0496122_0016702_897_1778 280
144 3300053131 Ga0500652_006079 Ga0500652_006079_41_883 280
145 3300055283 Ga0500661_008823 Ga0500661_008823_830_1684 280
146 iso_pu_bacteria 2585428060 2587745673 280
147 iso_pu_bacteria 2585428061 2587750894 280
148 iso_pu_bacteria 2588253712 2588445541 280
149 iso_pu_bacteria 2588254257 2590611150 280
150 iso_pu_bacteria 2842083920 2842085775 280
151 iso_pu_bacteria 2905999023 2906002490 280
152 iso_pu_bacteria 2945924605 2945926763 280
153 iso_pu_bacteria 2946019816 2946020441 280

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00809

Pterin_bind

Pterin binding enzyme

40

281

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tzn-assembly1.cif.gz_A crystal structure of the yersinia pestis dihydropteroate synthase. 0.9583 7 280
5v79-assembly1.cif.gz_A e. coli dihydropteroate synthase complexed with an 8-mercaptoguanine derivative: 2-((2-amino-9-methyl-6-oxo-6,9-dihydro-1h-purin-8-yl)thio)-n-phenylacetamide 0.9564 6 279
5u0w-assembly1.cif.gz_B e. coli dihydropteroate synthase complexed with 9-methylguanine 0.9551 7 279
5jq9-assembly1.cif.gz_B yersinia pestis dhps with pterine-sulfa conjugate compound 16 0.9541 6 279
5u10-assembly1.cif.gz_B e. coli dihydropteroate synthase complexed with pteroic acid 0.9529 7 279
ID Description Score Start End Superfamily
5jq9A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Dihydropteroate synthase-like 0.9476 6 280 3.20.20.20
3tznB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Dihydropteroate synthase-like 0.9447 6 280 3.20.20.20
5jq9A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Dihydropteroate synthase-like 0.9441 6 280 3.20.20.20
3tznB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Dihydropteroate synthase-like 0.9404 6 280 3.20.20.20
af_P9WNC9_29_318_3.20.20.20 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Dihydropteroate synthase-like 0.9387 19 279 3.20.20.20
ID Description Score Start End GO Terms
AF-A0A3D4CJ01-F1-model_v4 Dihydropteroate synthase 0.9855 119 206 GO:0004156
GO:0005829
GO:0046654
AF-A0A2D8KXS2-F1-model_v4 Pterin-binding domain-containing protein 0.981 51 165 GO:0004156
GO:0005829
GO:0046654
AF-A0A355FVZ2-F1-model_v4 dihydropteroate synthase (EC 2.5.1.15) 0.9736 56 279 GO:0004156
GO:0005829
GO:0046654
GO:0046656
GO:0046872
AF-A0A1I1MNC0-F1-model_v4 dihydropteroate synthase (EC 2.5.1.15) 0.9728 40 277 GO:0004156
GO:0005829
GO:0046654
GO:0046656
GO:0046872
AF-A0A6J4RBJ9-F1-model_v4 dihydropteroate synthase (EC 2.5.1.15) 0.9728 18 175 GO:0004156
GO:0005829
GO:0046654
GO:0046656
GO:0046872

Feature Viewer

pLDDT pTM Quality
87.79 0.88 High
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Predicted Structure (AlphaFold2)

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